Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABLIM1	0	genome.wustl.edu	37	10	116247760	116247760	+	Missense_Mutation	SNP	T	T	C			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	10	116247760	116247760	T	C	SNP	ABLIM1	ENST00000277895	human	ensembl	69_37n	-1	known	missense	c.998	p.H333R	1.000	smart_Znf_LIM	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM1	HGNC	ENSG00000099204	77	0	0.00	36	13	26.53	-	-	-
ADAMTS20	0	genome.wustl.edu	37	12	43944926	43944926	+	Missense_Mutation	SNP	T	T	C			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	12	43944926	43944926	T	C	SNP	ADAMTS20	ENST00000389420	human	ensembl	69_37n	-1	known	missense	c.239	p.Y80C	1.000	pfam_Peptidase_M12B_N	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	50	0	0.00	19	17	45.95	-	-	-
CADM2	0	genome.wustl.edu	37	3	85932472	85932472	+	Silent	SNP	C	C	T			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	3	85932472	85932472	C	T	SNP	CADM2	ENST00000405615	human	ensembl	69_37n	+1	known	silent	c.249	p.R83	0.920	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like	-	no_errors	CADM2	HGNC	ENSG00000175161	57	0	0.00	22	23	51.11	-	-	-
DTNB	0	genome.wustl.edu	37	2	25678299	25678299	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	2	25678299	25678299	C	T	SNP	DTNB	ENST00000406818	human	ensembl	69_37n	-1	known	missense	c.1144	p.V382M	1.000	pirsf_Distrobrevin	pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_Znf_ZZ,smart_Znf_ZZ,pirsf_Distrobrevin,pfscan_Znf_ZZ	-	no_errors	DTNB	HGNC	ENSG00000138101	35	0	0.00	9	9	50.00	-	-	-
ENSG00000267261	0	genome.wustl.edu	37	17	40272381	40272381	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	17	40272381	40272381	G	A	SNP	ENSG00000267261	ENST00000592248	human	ensembl	69_37n	-1	known	missense	c.449	p.T150M	0.486	smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	CTD-2132N18.3	Clone_based_vega_gene	ENSG00000267261	40	0	0.00	30	36	54.55	-	-	-
MSH3	0	genome.wustl.edu	37	5	80024722	80024722	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	5	80024722	80024722	T	-	DEL	MSH3	ENST00000265081	human	ensembl	69_37n	+1	known	frame_shift_del	c.1506	p.L503fs	0.998	pfam_DNA_mismatch_repair_MutS_connt,superfamily_DNA_mismatch_repair_MutS_connt	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mismatch_repair_MutS_connt,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mismatch_repair_MutS_connt,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318	83	0	0.00	12	2	14.29	-	-	-
MYB	0	genome.wustl.edu	37	6	135507043	135507044	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	6	135507043	135507044	-	A	INS	MYB	ENST00000341911	human	ensembl	69_37n	+1	known	frame_shift_ins	c.26_27	p.Y10fs	1.000:0.997	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYB	HGNC	ENSG00000118513	50	0	0.00	36	4	10.00	-	-	-
NPIPL2	0	genome.wustl.edu	37	16	74425902	74425902	+	Missense_Mutation	SNP	T	T	C			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	16	74425902	74425902	T	C	SNP	NPIPL2	ENST00000429990	human	ensembl	69_37n	+1	known	missense	c.1256	p.I419T	0.999	NULL	pfam_NPIP	-	no_errors	NPIPL2	HGNC	ENSG00000196436	20	0	0.00	10	4	28.57	-	-	-
OR11H1	0	genome.wustl.edu	37	22	16449539	16449539	+	Missense_Mutation	SNP	A	A	G			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	22	16449539	16449539	A	G	SNP	OR11H1	ENST00000252835	human	ensembl	69_37n	-1	known	missense	c.266	p.V89A	0.234	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR11H1	HGNC	ENSG00000130538	65	0	0.00	38	6	13.64	-	-	-
OTOR	0	genome.wustl.edu	37	20	16730581	16730581	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	20	16730581	16730581	G	A	SNP	OTOR	ENST00000246081	human	ensembl	69_37n	+1	known	missense	c.289	p.V97M	0.963	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain	-	no_errors	OTOR	HGNC	ENSG00000125879	57	0	0.00	36	9	20.00	-	-	-
P2RY10	0	genome.wustl.edu	37	X	78216689	78216689	+	Silent	SNP	C	C	T			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	X	78216689	78216689	C	T	SNP	P2RY10	ENST00000171757	human	ensembl	69_37n	+1	known	silent	c.672	p.S224	0.092	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	P2RY10	HGNC	ENSG00000078589	65	0	0.00	46	10	17.86	-	-	-
PIEZO1	0	genome.wustl.edu	37	16	88790292	88790292	+	Missense_Mutation	SNP	T	T	C			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	16	88790292	88790292	T	C	SNP	PIEZO1	ENST00000301015	human	ensembl	69_37n	-1	novel	missense	c.4322	p.Q1441R	1.000	NULL	pfam_DUF3595	-	no_errors	PIEZO1	HGNC	ENSG00000103335	37	0	0.00	20	8	28.57	-	-	-
SLC6A9	0	genome.wustl.edu	37	1	44476442	44476442	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	1	44476442	44476442	C	T	SNP	SLC6A9	ENST00000360584	human	ensembl	69_37n	-1	known	missense	c.362	p.G121D	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_glycine_GLY1	-	no_errors	SLC6A9	HGNC	ENSG00000196517	72	0	0.00	44	19	30.16	-	-	-
SOX15	0	genome.wustl.edu	37	17	7491739	7491739	+	Missense_Mutation	SNP	T	T	G			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	17	7491739	7491739	T	G	SNP	SOX15	ENST00000250055	human	ensembl	69_37n	-1	known	missense	c.659	p.N220T	0.009	NULL	pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	SOX15	HGNC	ENSG00000129194	64	0	0.00	58	7	10.77	-	-	-
SPTB	0	genome.wustl.edu	37	14	65266493	65266493	+	Missense_Mutation	SNP	T	T	C			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	14	65266493	65266493	T	C	SNP	SPTB	ENST00000389722	human	ensembl	69_37n	-1	known	missense	c.1036	p.T346A	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	22	0	0.00	13	10	40.00	-	-	-
TMEM247	0	genome.wustl.edu	37	2	46707888	46707888	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	2	46707888	46707888	G	-	DEL	TMEM247	ENST00000434431	human	ensembl	69_37n	+1	known	frame_shift_del	c.462	p.A155fs	0.083	NULL	NULL	-	no_stop_codon:bad_bp_length_for_coding_region	TMEM247	HGNC	ENSG00000187600	20	0	0.00	7	3	30.00	-	-	-
ZNF566	0	genome.wustl.edu	37	19	36940860	36940860	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	19	36940860	36940860	T	-	DEL	ZNF566	ENST00000392170	human	ensembl	69_37n	-1	known	frame_shift_del	c.279	p.E94fs	0.479	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF566	HGNC	ENSG00000186017	31	0	0.00	9	2	18.18	-	-	-
ZNF574	0	genome.wustl.edu	37	19	42585066	42585066	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	19	42585066	42585066	G	A	SNP	ZNF574	ENST00000222339	human	ensembl	69_37n	+1	known	missense	c.2578	p.D860N	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF574	HGNC	ENSG00000105732	20	0	0.00	21	10	32.26	-	-	-
ZNF777	0	genome.wustl.edu	37	7	149129243	149129243	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SB-01A-11D-A142-09	TCGA-A1-A0SB-10B-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	db9d40fb-bfce-4c3b-a6c2-41c5c88982f1	a3254f8e-3bbd-42fc-abea-a5f25b7648b3	7	149129243	149129243	G	A	SNP	ZNF777	ENST00000247930	human	ensembl	69_37n	-1	known	missense	c.2120	p.S707L	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453	21	0	0.00	24	8	25.00	-	-	-
