Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTBL2	0	genome.wustl.edu	37	5	56777892	56777892	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	5	56777892	56777892	C	G	SNP	ACTBL2	ENST00000423391	human	ensembl	69_37n	-1	known	missense	c.643	p.E215Q	1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTBL2	HGNC	ENSG00000169067	72	0	0.00	44	20	31.25	-	-	-
CAT	0	genome.wustl.edu	37	11	34490057	34490058	+	RNA	INS	-	-	A			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	11	34490057	34490058	-	A	INS	CAT	ENST00000525707	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	CAT	HGNC	ENSG00000121691	60	0	0.00	31	4	11.43	-	-	-
CHD9	0	genome.wustl.edu	37	16	53190227	53190227	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	16	53190227	53190227	T	G	SNP	CHD9	ENST00000398510	human	ensembl	69_37n	+1	known	missense	c.226	p.S76A	0.982	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	140	0	0.00	16	47	74.60	-	-	-
CPAMD8	0	genome.wustl.edu	37	19	17131150	17131150	+	Nonsense_Mutation	SNP	G	G	C			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	19	17131150	17131150	G	C	SNP	CPAMD8	ENST00000443236	human	ensembl	69_37n	-1	known	nonsense	c.431	p.S144*	1.000	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal-type_dom,pfam_Prot_inh_Kazal,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Prot_inh_Kazal	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CPAMD8	HGNC	ENSG00000160111	96	0	0.00	56	27	32.53	-	-	-
DNM1P46	0	genome.wustl.edu	37	15	100340123	100340125	+	RNA	DEL	AGA	AGA	-			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	15	100340123	100340125	AGA	-	DEL	DNM1P46	ENST00000341853	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.899:0.883:0.880	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	13	0	0.00	10	3	23.08	-	-	-
DRP2	0	genome.wustl.edu	37	X	100497359	100497359	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	X	100497359	100497359	G	A	SNP	DRP2	ENST00000395209	human	ensembl	69_37n	+1	known	missense	c.874	p.V292M	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin-related_2	pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_Znf_ZZ,pfam_Spectrin_repeat,pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin-related_2,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DRP2	HGNC	ENSG00000102385	102	0	0.00	80	16	16.67	-	-	-
EML3	0	genome.wustl.edu	37	11	62371661	62371661	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	11	62371661	62371661	C	T	SNP	EML3	ENST00000394776	human	ensembl	69_37n	-1	novel	missense	c.1978	p.G660R	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_HELP,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	EML3	HGNC	ENSG00000149499	34	0	0.00	16	12	42.86	-	-	-
FANCC	0	genome.wustl.edu	37	9	98011555	98011555	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	9	98011555	98011555	C	A	SNP	FANCC	ENST00000289081	human	ensembl	69_37n	-1	known	missense	c.19	p.D7Y	0.005	pfam_Fanconi,pirsf_Fanconi	pfam_Fanconi,pirsf_Fanconi,prints_Fanconi	-	no_errors	FANCC	HGNC	ENSG00000158169	102	0	0.00	29	21	41.18	-	-	-
GPS2	0	genome.wustl.edu	37	17	7217849	7217850	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	17	7217849	7217850	-	T	INS	GPS2	ENST00000380728	human	ensembl	69_37n	-1	known	frame_shift_ins	c.162_161	p.E55fs	1.000:1.000	NULL	NULL	-	no_errors	GPS2	HGNC	ENSG00000132522	114	0	0.00	41	43	51.19	-	-	-
GRIK5	0	genome.wustl.edu	37	19	42566998	42566998	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	19	42566998	42566998	A	T	SNP	GRIK5	ENST00000301218	human	ensembl	69_37n	-1	known	missense	c.254	p.I85N	1.000	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK5	HGNC	ENSG00000105737	89	0	0.00	38	30	44.12	-	-	-
HEATR7B2	0	genome.wustl.edu	37	5	41058282	41058282	+	Silent	SNP	G	G	A			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	5	41058282	41058282	G	A	SNP	HEATR7B2	ENST00000399564	human	ensembl	69_37n	-1	known	silent	c.639	p.H213	0.930	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR7B2	HGNC	ENSG00000171495	143	0	0.00	68	47	40.87	-	-	-
HIST1H2AK	0	genome.wustl.edu	37	6	27805932	27805932	+	Silent	SNP	C	C	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	6	27805932	27805932	C	T	SNP	HIST1H2AK	ENST00000330180	human	ensembl	69_37n	-1	known	silent	c.186	p.E62	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AK	HGNC	ENSG00000184348	128	0	0.00	127	31	19.62	-	-	-
KANSL1	0	genome.wustl.edu	37	17	44110510	44110511	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	17	44110510	44110511	CA	-	DEL	KANSL1	ENST00000262419	human	ensembl	69_37n	-1	known	frame_shift_del	c.2773_2772	p.C924fs	1.000:1.000	NULL	NULL	-	no_errors	KANSL1	HGNC	ENSG00000120071	220	0	0.00	114	65	35.91	-	-	-
KHDRBS1	0	genome.wustl.edu	37	1	32495940	32495942	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	1	32495940	32495942	GAG	-	DEL	KHDRBS1	ENST00000327300	human	ensembl	69_37n	+1	known	in_frame_del	c.424_426	p.E143in_frame_del	1.000:0.998:0.666	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS1	HGNC	ENSG00000121774	64	0	0.00	38	15	28.30	-	-	-
KIAA0319L	0	genome.wustl.edu	37	1	35936468	35936468	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	1	35936468	35936468	G	A	SNP	KIAA0319L	ENST00000325722	human	ensembl	69_37n	-1	known	missense	c.1109	p.S370L	1.000	pfam_PKD/REJ-like,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319L	HGNC	ENSG00000142687	151	0	0.00	121	17	12.32	-	-	-
LRIG2	0	genome.wustl.edu	37	1	113616247	113616248	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	1	113616247	113616248	-	C	INS	LRIG2	ENST00000361127	human	ensembl	69_37n	+1	known	frame_shift_ins	c.219_220	p.D75fs	1.000:1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LRIG2	HGNC	ENSG00000198799	13	0	0.00	13	3	18.75	-	-	-
MIF4GD	0	genome.wustl.edu	37	17	73264205	73264206	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	17	73264205	73264206	AC	-	DEL	MIF4GD	ENST00000577542	human	ensembl	69_37n	-1	known	frame_shift_del	c.274_273	p.F92fs	1.000:0.995	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold	-	no_errors	MIF4GD	HGNC	ENSG00000125457	43	0	0.00	33	28	44.44	-	-	-
MRGPRX3	0	genome.wustl.edu	37	11	18158850	18158850	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	11	18158850	18158850	C	T	SNP	MRGPRX3	ENST00000396275	human	ensembl	69_37n	+1	known	missense	c.101	p.T34M	0.000	prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	MRGPRX3	HGNC	ENSG00000179826	172	0	0.00	59	38	39.18	-	-	-
ODZ4	0	genome.wustl.edu	37	11	78498080	78498080	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	11	78498080	78498080	G	T	SNP	ODZ4	ENST00000278550	human	ensembl	69_37n	-1	known	missense	c.2228	p.T743N	1.000	pfam_EGF_extracell,smart_EGF-like	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ4	HGNC	ENSG00000149256	40	0	0.00	17	11	39.29	-	-	-
OR5AU1	0	genome.wustl.edu	37	14	21623512	21623513	+	Frame_Shift_Del	DEL	CG	CG	-			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	CG	CG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	14	21623512	21623513	CG	-	DEL	OR5AU1	ENST00000304418	human	ensembl	69_37n	-1	known	frame_shift_del	c.673_672	p.V225fs	0.257:0.154	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5AU1	HGNC	ENSG00000169327	88	0	0.00	88	40	31.25	-	-	-
OR5L1	0	genome.wustl.edu	37	11	55579499	55579499	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	11	55579499	55579499	G	T	SNP	OR5L1	ENST00000333973	human	ensembl	69_37n	+1	known	missense	c.557	p.S186I	0.000	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR5L1	HGNC	ENSG00000186117	145	0	0.00	60	35	36.84	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178917478	178917478	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	3	178917478	178917478	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.353	p.G118D	1.000	NULL	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	97	0	0.00	43	32	42.67	-	-	-
PLEKHA2	0	genome.wustl.edu	37	8	38809720	38809721	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	8	38809720	38809721	-	C	INS	PLEKHA2	ENST00000420274	human	ensembl	69_37n	+1	known	frame_shift_ins	c.523_524	p.H176fs	0.486:0.798	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA2	HGNC	ENSG00000169499	212	0	0.00	270	30	10.00	-	-	-
SFRP1	0	genome.wustl.edu	37	8	41166156	41166156	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	8	41166156	41166156	T	G	SNP	SFRP1	ENST00000220772	human	ensembl	69_37n	-1	known	missense	c.523	p.T175P	1.000	superfamily_Frizzled_dom	pfam_Frizzled_dom,pfam_Netrin_module_non-TIMP,superfamily_Frizzled_dom,superfamily_TIMP-like_OB-fold,smart_Frizzled_dom,smart_Netrin_module_non-TIMP,pfscan_Frizzled_dom,pfscan_Netrin_domain	-	no_errors	SFRP1	HGNC	ENSG00000104332	70	0	0.00	34	6	14.63	-	-	-
SPTB	0	genome.wustl.edu	37	14	65266520	65266520	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	14	65266520	65266520	C	T	SNP	SPTB	ENST00000389722	human	ensembl	69_37n	-1	known	missense	c.1009	p.V337I	0.995	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	91	0	0.00	34	20	37.04	-	-	-
SV2A	0	genome.wustl.edu	37	1	149879682	149879682	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	1	149879682	149879682	C	T	SNP	SV2A	ENST00000369146	human	ensembl	69_37n	-1	known	missense	c.1456	p.V486M	0.992	pfscan_MFS_dom,tigrfam_SV2_chordata	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2_chordata	-	no_errors	SV2A	HGNC	ENSG00000159164	196	0	0.00	107	77	41.85	-	-	-
TAPT1	0	genome.wustl.edu	37	4	16193020	16193020	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	4	16193020	16193020	G	A	SNP	TAPT1	ENST00000513782	human	ensembl	69_37n	-1	known	missense	c.88	p.R30C	0.804	pfam_Membrane_Tatp1/CMV_rcpt	pfam_Membrane_Tatp1/CMV_rcpt	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	TAPT1	HGNC	ENSG00000169762	65	0	0.00	43	22	33.33	-	-	-
TMEM246	0	genome.wustl.edu	37	9	104238634	104238634	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	9	104238634	104238634	G	T	SNP	TMEM246	ENST00000374847	human	ensembl	69_37n	-1	known	missense	c.741	p.H247Q	1.000	NULL	NULL	-	no_errors	TMEM246	HGNC	ENSG00000165152	115	0	0.00	43	27	38.57	-	-	-
TMIGD2	0	genome.wustl.edu	37	19	4294613	4294613	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	19	4294613	4294613	C	T	SNP	TMIGD2	ENST00000301272	human	ensembl	69_37n	-1	known	nonsense	c.513	p.W171*	0.007	NULL	smart_Ig_sub,pfscan_Ig-like	-	no_errors	TMIGD2	HGNC	ENSG00000167664	74	0	0.00	24	9	26.47	-	-	-
TRMT12	0	genome.wustl.edu	37	8	125463552	125463552	+	Silent	SNP	T	T	C			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	8	125463552	125463552	T	C	SNP	TRMT12	ENST00000328599	human	ensembl	69_37n	+1	known	silent	c.384	p.A128	0.856	NULL	pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TRMT12	HGNC	ENSG00000183665	93	0	0.00	69	13	15.85	-	-	-
UBAP2L	0	genome.wustl.edu	37	1	154227320	154227320	+	Silent	SNP	C	C	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	1	154227320	154227320	C	T	SNP	UBAP2L	ENST00000361546	human	ensembl	69_37n	+1	known	silent	c.1863	p.F621	1.000	NULL	pfam_DUF3697_Uba2,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP2L	HGNC	ENSG00000143569	370	3	0.80	132	89	40.27	-	-	-
ZDHHC1	0	genome.wustl.edu	37	16	67432541	67432541	+	Missense_Mutation	SNP	A	A	C			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	16	67432541	67432541	A	C	SNP	ZDHHC1	ENST00000348579	human	ensembl	69_37n	-1	known	missense	c.749	p.L250R	0.998	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC1	HGNC	ENSG00000159714	77	0	0.00	3	7	70.00	-	-	-
ZNF843	0	genome.wustl.edu	37	16	31447564	31447564	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	16	31447564	31447564	C	T	SNP	ZNF843	ENST00000315678	human	ensembl	69_37n	-1	known	missense	c.607	p.G203R	0.001	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF843	HGNC	ENSG00000176723	116	0	0.00	6	8	57.14	-	-	-
ZXDA	0	genome.wustl.edu	37	X	57935544	57935544	+	Silent	SNP	C	C	A			TCGA-A2-A04V-01A-21W-A050-09	TCGA-A2-A04V-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89501861-2778-4b88-9a44-939fed99850d	5a514786-920b-4f35-932d-c2116fdea598	X	57935544	57935544	C	A	SNP	ZXDA	ENST00000358697	human	ensembl	69_37n	-1	known	silent	c.1311	p.L437	0.996	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDA	HGNC	ENSG00000198205	139	0	0.00	84	59	41.26	-	-	-
