Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AGAP7	0	genome.wustl.edu	37	10	51465579	51465579	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	10	51465579	51465579	A	G	SNP	AGAP7	ENST00000374095	human	ensembl	69_37n	-1	known	missense	c.877	p.Y293H	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGAP7	HGNC	ENSG00000204169	84	0	0.00	50	33	39.76	-	-	-
AKT3	0	genome.wustl.edu	37	1	243727150	243727150	+	Silent	SNP	A	A	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	1	243727150	243727150	A	G	SNP	AKT3	ENST00000263826	human	ensembl	69_37n	-1	known	silent	c.820	p.L274	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom	-	no_errors	AKT3	HGNC	ENSG00000117020	252	0	0.00	231	55	19.23	-	-	-
ARHGAP31	0	genome.wustl.edu	37	3	119133553	119133553	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	3	119133553	119133553	C	T	SNP	ARHGAP31	ENST00000264245	human	ensembl	69_37n	+1	known	missense	c.2777	p.A926V	0.890	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081	58	0	0.00	57	22	27.85	-	-	-
ATHL1	0	genome.wustl.edu	37	11	289917	289917	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	11	289917	289917	G	A	SNP	ATHL1	ENST00000409548	human	ensembl	69_37n	+1	known	missense	c.101	p.R34Q	0.926	NULL	pfam_Glyco_hydro_65_M,superfamily_6-hairpin_glycosidase-like	-	no_errors	ATHL1	HGNC	ENSG00000142102	158	0	0.00	36	16	30.77	-	-	-
BCAT2	0	genome.wustl.edu	37	19	49303011	49303011	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	19	49303011	49303011	C	T	SNP	BCAT2	ENST00000316273	human	ensembl	69_37n	-1	known	missense	c.616	p.V206M	0.016	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	-	no_errors	BCAT2	HGNC	ENSG00000105552	41	0	0.00	13	14	51.85	-	-	-
BMS1P4	0	genome.wustl.edu	37	10	75480346	75480346	+	RNA	SNP	C	C	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	10	75480346	75480346	C	A	SNP	BMS1P4	ENST00000399449	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-464F9.1	Clone_based_vega_gene	ENSG00000242288	64	0	0.00	43	24	35.82	-	-	-
BRWD1	0	genome.wustl.edu	37	21	40570751	40570751	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	21	40570751	40570751	C	T	SNP	BRWD1	ENST00000333229	human	ensembl	69_37n	-1	known	missense	c.5591	p.G1864E	0.010	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	BRWD1	HGNC	ENSG00000185658	151	0	0.00	245	174	41.53	-	-	-
BRWD1	0	genome.wustl.edu	37	21	40570851	40570851	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	21	40570851	40570851	C	G	SNP	BRWD1	ENST00000333229	human	ensembl	69_37n	-1	known	missense	c.5491	p.D1831H	0.001	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	BRWD1	HGNC	ENSG00000185658	184	0	0.00	330	193	36.90	-	-	-
BRWD1	0	genome.wustl.edu	37	21	40571558	40571558	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	21	40571558	40571558	C	G	SNP	BRWD1	ENST00000333229	human	ensembl	69_37n	-1	known	missense	c.4784	p.R1595T	0.960	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	BRWD1	HGNC	ENSG00000185658	41	0	0.00	67	50	42.74	-	-	-
C12orf57	0	genome.wustl.edu	37	12	7053746	7053746	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	12	7053746	7053746	G	A	SNP	C12orf57	ENST00000229281	human	ensembl	69_37n	+1	known	missense	c.160	p.V54M	1.000	NULL	NULL	-	no_errors	C12orf57	HGNC	ENSG00000111678	165	0	0.00	31	17	35.42	-	-	-
CCDC171	0	genome.wustl.edu	37	9	15778997	15778998	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	9	15778997	15778998	TT	-	DEL	CCDC171	ENST00000380701	human	ensembl	69_37n	+1	known	frame_shift_del	c.2930_2931	p.L977fs	0.997:1.000	NULL	superfamily_STAT_TF_coiled-coil	-	no_errors	CCDC171	HGNC	ENSG00000164989	80	0	0.00	40	22	35.48	-	-	-
CCDC79	0	genome.wustl.edu	37	16	66803899	66803899	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	16	66803899	66803899	G	T	SNP	CCDC79	ENST00000433154	human	ensembl	69_37n	-1	known	missense	c.1586	p.T529N	0.016	superfamily_Cytokine_IL1-like	pfam_SANT/Myb,superfamily_ARM-type_fold,superfamily_Homeodomain-like,superfamily_Cytokine_IL1-like,smart_SANT/Myb	-	no_errors	CCDC79	HGNC	ENSG00000249961	140	0	0.00	147	26	15.03	-	-	-
CDK12	0	genome.wustl.edu	37	17	37681111	37681111	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	17	37681111	37681111	G	T	SNP	CDK12	ENST00000447079	human	ensembl	69_37n	+1	known	missense	c.3280	p.V1094L	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	98	0	0.00	31	30	49.18	-	-	-
CNOT1	0	genome.wustl.edu	37	16	58589801	58589801	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	16	58589801	58589801	G	A	SNP	CNOT1	ENST00000317147	human	ensembl	69_37n	-1	known	nonsense	c.2491	p.Q831*	1.000	NULL	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	239	0	0.00	99	55	35.71	-	-	-
CPSF4	0	genome.wustl.edu	37	7	99054135	99054135	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	7	99054135	99054135	G	T	SNP	CPSF4	ENST00000452047	human	ensembl	69_37n	+1	putative	missense	c.554	p.S185I	0.974	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_start_codon:no_stop_codon	CPSF4	HGNC	ENSG00000160917	129	1	0.77	44	27	38.03	-	-	-
CSRNP2	0	genome.wustl.edu	37	12	51457800	51457800	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	12	51457800	51457800	A	G	SNP	CSRNP2	ENST00000228515	human	ensembl	69_37n	-1	known	missense	c.1361	p.L454P	1.000	NULL	prints_Cys/Ser-rich_nuc_prot	-	no_errors	CSRNP2	HGNC	ENSG00000110925	131	0	0.00	71	36	33.64	-	-	-
DOPEY1	0	genome.wustl.edu	37	6	83877655	83877655	+	Silent	SNP	C	C	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	6	83877655	83877655	C	G	SNP	DOPEY1	ENST00000349129	human	ensembl	69_37n	+1	known	silent	c.7167	p.T2389	0.987	NULL	pfam_Dopey_N,superfamily_ARM-type_fold	-	no_errors	DOPEY1	HGNC	ENSG00000083097	74	0	0.00	26	18	40.91	-	-	-
DRD4	0	genome.wustl.edu	37	11	640571	640571	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	11	640571	640571	G	A	SNP	DRD4	ENST00000176183	human	ensembl	69_37n	+1	known	missense	c.1228	p.V410I	0.792	prints_Dopamine_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Dopa_D4_rcpt,prints_Dopamine_rcpt	-	no_errors	DRD4	HGNC	ENSG00000069696	169	0	0.00	24	21	46.67	-	-	-
EIF2C2	0	genome.wustl.edu	37	8	141566309	141566309	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	8	141566309	141566309	G	C	SNP	EIF2C2	ENST00000220592	human	ensembl	69_37n	-1	known	missense	c.1103	p.T368S	1.000	pfam_PAZ,superfamily_PAZ,smart_PAZ	pfam_Piwi,pfam_PAZ,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	EIF2C2	HGNC	ENSG00000123908	159	0	0.00	129	38	22.75	-	-	-
EZH1	0	genome.wustl.edu	37	17	40856673	40856673	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	17	40856673	40856673	C	G	SNP	EZH1	ENST00000428826	human	ensembl	69_37n	-1	known	missense	c.1964	p.R655P	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH1	HGNC	ENSG00000108799	189	0	0.00	39	40	50.63	-	-	-
GNAT2	0	genome.wustl.edu	37	1	110148929	110148929	+	Splice_Site	DEL	C	C	-			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	1	110148929	110148929	C	-	DEL	GNAT2	ENST00000351050	human	ensembl	69_37n	-1	known	splice_site_del	c.590+1	e5+1	1.000	-	-	-	no_errors	GNAT2	HGNC	ENSG00000134183	209	0	0.00	146	24	14.12	-	-	-
GRID2	0	genome.wustl.edu	37	4	94377069	94377069	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	4	94377069	94377069	C	T	SNP	GRID2	ENST00000282020	human	ensembl	69_37n	+1	known	missense	c.1802	p.T601M	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208	470	0	0.00	134	96	41.74	-	-	-
HSPG2	0	genome.wustl.edu	37	1	22211365	22211365	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	1	22211365	22211365	C	T	SNP	HSPG2	ENST00000374695	human	ensembl	69_37n	-1	known	missense	c.1402	p.D468N	0.980	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EGF-like_dom,superfamily_ConA-like_lec_gl,superfamily_LDrepeatLR_classA_rpt,smart_SEA,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA,pfscan_Ig-like	-	no_errors	HSPG2	HGNC	ENSG00000142798	71	0	0.00	13	12	48.00	-	-	-
IGKV1-6	0	genome.wustl.edu	37	2	89265934	89265934	+	Silent	SNP	A	A	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	2	89265934	89265934	A	C	SNP	IGKV1-6	ENST00000464162	human	ensembl	69_37n	-1	known	silent	c.198	p.P66	0.980	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGKV1-6	HGNC	ENSG00000239855	447	0	0.00	202	134	39.88	-	-	-
IRS4	0	genome.wustl.edu	37	X	107979179	107979179	+	Silent	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	X	107979179	107979179	G	A	SNP	IRS4	ENST00000372129	human	ensembl	69_37n	-1	known	silent	c.396	p.A132	0.980	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124	13	0	0.00	10	8	44.44	-	-	-
JPH2	0	genome.wustl.edu	37	20	42788508	42788508	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	20	42788508	42788508	C	T	SNP	JPH2	ENST00000372980	human	ensembl	69_37n	-1	known	missense	c.919	p.E307K	1.000	pfam_MORN,smart_MORN,pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH2	HGNC	ENSG00000149596	164	0	0.00	107	12	10.08	-	-	-
KIAA1199	0	genome.wustl.edu	37	15	81229087	81229087	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	15	81229087	81229087	C	G	SNP	KIAA1199	ENST00000220244	human	ensembl	69_37n	+1	known	missense	c.3082	p.L1028V	0.757	NULL	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888	169	0	0.00	81	49	37.69	-	-	-
LRP2	0	genome.wustl.edu	37	2	170042184	170042184	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	2	170042184	170042184	C	T	SNP	LRP2	ENST00000263816	human	ensembl	69_37n	-1	known	missense	c.9674	p.G3225E	1.000	superfamily_Growth_fac_rcpt,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	345	0	0.00	170	90	34.62	-	-	-
MAFG	0	genome.wustl.edu	37	17	79880760	79880760	+	Silent	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	17	79880760	79880760	C	T	SNP	MAFG	ENST00000357736	human	ensembl	69_37n	-1	known	silent	c.210	p.V70	0.998	pfam_bZIP_Maf,smart_bZIP,pfscan_bZIP	pfam_bZIP_Maf,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	MAFG	HGNC	ENSG00000197063	90	0	0.00	33	12	26.67	-	-	-
MFSD6L	0	genome.wustl.edu	37	17	8702017	8702017	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	17	8702017	8702017	G	C	SNP	MFSD6L	ENST00000329805	human	ensembl	69_37n	-1	known	missense	c.422	p.P141R	0.000	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD6L	HGNC	ENSG00000185156	151	0	0.00	29	40	57.14	-	-	-
MUC12	0	genome.wustl.edu	37	7	100639291	100639291	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	7	100639291	100639291	C	T	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.5876	p.S1959F	0.414	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	10	0	0.00	7	6	42.86	-	-	-
MUC12	0	genome.wustl.edu	37	7	100647790	100647790	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	7	100647790	100647790	C	T	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.14375	p.S4792F	0.001	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	756	0	0.00	304	261	46.19	-	-	-
MYO1D	0	genome.wustl.edu	37	17	31087405	31087405	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	17	31087405	31087405	A	T	SNP	MYO1D	ENST00000318217	human	ensembl	69_37n	-1	known	missense	c.1199	p.I400N	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1D	HGNC	ENSG00000176658	195	0	0.00	97	73	42.94	-	-	-
OR2D2	0	genome.wustl.edu	37	11	6913663	6913663	+	Silent	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	11	6913663	6913663	G	A	SNP	OR2D2	ENST00000299459	human	ensembl	69_37n	-1	known	silent	c.69	p.T23	0.019	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR2D2	HGNC	ENSG00000166368	161	0	0.00	97	46	32.17	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952090	178952090	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	3	178952090	178952090	G	C	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3145	p.G1049R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	152	0	0.00	88	23	20.72	-	-	-
PPP6R1	0	genome.wustl.edu	37	19	55753591	55753591	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	19	55753591	55753591	G	T	SNP	PPP6R1	ENST00000412770	human	ensembl	69_37n	-1	known	missense	c.788	p.S263Y	0.979	pfam_SAPS,superfamily_ARM-type_fold	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R1	HGNC	ENSG00000105063	316	0	0.00	182	30	14.15	-	-	-
PRRT3	0	genome.wustl.edu	37	3	9990556	9990556	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	3	9990556	9990556	G	A	SNP	PRRT3	ENST00000295984	human	ensembl	69_37n	-1	known	missense	c.1057	p.R353W	1.000	NULL	NULL	-	no_errors	PRRT3	HGNC	ENSG00000163704	75	0	0.00	44	78	63.41	-	-	-
RNF213	0	genome.wustl.edu	37	17	78360175	78360175	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	17	78360175	78360175	C	T	SNP	RNF213	ENST00000582970	human	ensembl	69_37n	+1	known	missense	c.14665	p.R4889C	0.001	NULL	smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	185	0	0.00	62	43	40.95	-	-	-
RP1	0	genome.wustl.edu	37	8	55540804	55540804	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	8	55540804	55540804	C	A	SNP	RP1	ENST00000220676	human	ensembl	69_37n	+1	known	missense	c.4362	p.S1454R	0.848	NULL	pfam_Doublecortin_dom,superfamily_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237	54	0	0.00	26	19	42.22	-	-	-
RPS6KA6	0	genome.wustl.edu	37	X	83411145	83411145	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	X	83411145	83411145	C	T	SNP	RPS6KA6	ENST00000262752	human	ensembl	69_37n	-1	known	missense	c.196	p.E66K	1.000	superfamily_Kinase-like_dom,pirsf_Ribosomal_S6_kinase_II	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_cat_dom	-	no_errors	RPS6KA6	HGNC	ENSG00000072133	216	0	0.00	86	61	41.50	-	-	-
RTN4	0	genome.wustl.edu	37	2	55214629	55214629	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	2	55214629	55214629	G	A	SNP	RTN4	ENST00000438462	human	ensembl	69_37n	-1	putative	nonsense	c.289	p.Q97*	1.000	pfam_Reticulon,pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	RTN4	HGNC	ENSG00000115310	304	0	0.00	85	48	36.09	-	-	-
RUNX1	0	genome.wustl.edu	37	21	36252994	36252995	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	21	36252994	36252995	-	C	INS	RUNX1	ENST00000300305	human	ensembl	69_37n	-1	known	frame_shift_ins	c.368_367	p.D123fs	0.999:1.000	pfam_AML1/Runt_N,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	pfam_AML1/Runt_N,pfam_RunxI,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	-	no_errors	RUNX1	HGNC	ENSG00000159216	304	0	0.00	286	119	29.38	-	-	-
RYR2	0	genome.wustl.edu	37	1	237711763	237711763	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	1	237711763	237711763	C	A	SNP	RYR2	ENST00000360064	human	ensembl	69_37n	+1	known	missense	c.2933	p.P978H	1.000	pfam_Ryanodine_rcpt	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	188	0	0.00	111	42	27.45	-	-	-
SCFD2	0	genome.wustl.edu	37	4	54231342	54231342	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	4	54231342	54231342	G	C	SNP	SCFD2	ENST00000401642	human	ensembl	69_37n	-1	known	missense	c.767	p.A256G	1.000	NULL	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	SCFD2	HGNC	ENSG00000184178	221	0	0.00	66	50	42.74	-	-	-
SF3B4	0	genome.wustl.edu	37	1	149895759	149895759	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	1	149895759	149895759	C	A	SNP	SF3B4	ENST00000271628	human	ensembl	69_37n	-1	known	missense	c.1061	p.R354L	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SF3B4	HGNC	ENSG00000143368	75	0	0.00	33	16	32.00	-	-	-
SLC6A13	0	genome.wustl.edu	37	12	352926	352926	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	12	352926	352926	A	T	SNP	SLC6A13	ENST00000343164	human	ensembl	69_37n	-1	known	missense	c.256	p.F86I	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT2	-	no_errors	SLC6A13	HGNC	ENSG00000010379	242	0	0.00	67	32	32.32	-	-	-
SVEP1	0	genome.wustl.edu	37	9	113192280	113192280	+	Silent	SNP	A	A	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	9	113192280	113192280	A	C	SNP	SVEP1	ENST00000401783	human	ensembl	69_37n	-1	known	silent	c.5535	p.V1845	0.994	superfamily_Complement_control_module,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_EGF-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Complement_control_module,superfamily_Growth_fac_rcpt,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd,smart_EGF-like,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124	168	0	0.00	101	49	32.67	-	-	-
TBP	0	genome.wustl.edu	37	6	170871052	170871052	+	Silent	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	6	170871052	170871052	G	A	SNP	TBP	ENST00000230354	human	ensembl	69_37n	+1	known	silent	c.228	p.Q76	0.994	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	44	0	0.00	44	9	16.98	-	-	-
TCEAL2	0	genome.wustl.edu	37	X	101382274	101382274	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	X	101382274	101382274	C	A	SNP	TCEAL2	ENST00000329035	human	ensembl	69_37n	+1	known	missense	c.472	p.H158N	0.034	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL2	HGNC	ENSG00000184905	166	0	0.00	99	34	25.56	-	-	-
TP53	0	genome.wustl.edu	37	17	7578263	7578263	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	17	7578263	7578263	G	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	nonsense	c.586	p.R196*	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	265	0	0.00	72	84	53.85	-	-	-
TSTD1	0	genome.wustl.edu	37	1	161008416	161008416	+	Silent	SNP	G	G	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	1	161008416	161008416	G	T	SNP	TSTD1	ENST00000368023	human	ensembl	69_37n	-1	known	silent	c.79	p.R27	0.929	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	-	no_errors	TSTD1	HGNC	ENSG00000215845	37	0	0.00	51	16	23.53	-	-	-
USH2A	0	genome.wustl.edu	37	1	216348792	216348792	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	1	216348792	216348792	C	T	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.4429	p.G1477R	0.120	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	335	0	0.00	191	84	30.55	-	-	-
VRK3	0	genome.wustl.edu	37	19	50482398	50482398	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	19	50482398	50482398	G	T	SNP	VRK3	ENST00000316763	human	ensembl	69_37n	-1	known	missense	c.1378	p.L460M	0.003	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	VRK3	HGNC	ENSG00000105053	310	1	0.32	113	71	38.59	-	-	-
WWP2	0	genome.wustl.edu	37	16	69971470	69971470	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	16	69971470	69971470	A	T	SNP	WWP2	ENST00000356003	human	ensembl	69_37n	+1	known	missense	c.2258	p.Q753L	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_Rsp5_WWP,superfamily_HECT,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_WW_Rsp5_WWP,smart_C2_Ca-dep,smart_WW_Rsp5_WWP,smart_HECT,pfscan_HECT,pfscan_WW_Rsp5_WWP	-	no_errors	WWP2	HGNC	ENSG00000198373	140	0	0.00	51	31	37.80	-	-	-
ZNF160	0	genome.wustl.edu	37	19	53571578	53571578	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	19	53571578	53571578	C	T	SNP	ZNF160	ENST00000418871	human	ensembl	69_37n	-1	known	missense	c.2209	p.E737K	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF160	HGNC	ENSG00000170949	266	0	0.00	56	140	71.43	-	-	-
ZNF160	0	genome.wustl.edu	37	19	53573463	53573463	+	Missense_Mutation	SNP	A	A	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	19	53573463	53573463	A	C	SNP	ZNF160	ENST00000418871	human	ensembl	69_37n	-1	known	missense	c.324	p.S108R	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF160	HGNC	ENSG00000170949	263	0	0.00	63	178	73.86	-	-	-
ZNF335	0	genome.wustl.edu	37	20	44596988	44596988	+	Silent	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	20	44596988	44596988	C	T	SNP	ZNF335	ENST00000322927	human	ensembl	69_37n	-1	known	silent	c.456	p.V152	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF335	HGNC	ENSG00000198026	132	0	0.00	133	30	18.40	-	-	-
ZNF480	0	genome.wustl.edu	37	19	52824933	52824933	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	19	52824933	52824933	G	C	SNP	ZNF480	ENST00000468240	human	ensembl	69_37n	+1	known	missense	c.430	p.D144H	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF480	HGNC	ENSG00000198464	98	0	0.00	71	41	36.61	-	-	-
ZNF642	0	genome.wustl.edu	37	1	40961283	40961283	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	1	40961283	40961283	C	T	SNP	ZNF642	ENST00000372705	human	ensembl	69_37n	+1	known	missense	c.1133	p.S378F	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,superfamily_Retrov_capsid_C,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF642	HGNC	ENSG00000187815	111	0	0.00	42	14	25.00	-	-	-
ZNF705D	0	genome.wustl.edu	37	8	11970495	11970495	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	8	11970495	11970495	G	A	SNP	ZNF705D	ENST00000400085	human	ensembl	69_37n	+1	known	missense	c.731	p.R244Q	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF705D	HGNC	ENSG00000215343	39	0	0.00	12	5	29.41	-	-	-
ZNF821	0	genome.wustl.edu	37	16	71893986	71893986	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0CW-01A-21D-A10Y-09	TCGA-A2-A0CW-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da4f0f85-b16f-40fa-95c6-524d70d7ac4d	b6b51168-dc64-4bb1-aca5-346a1f1c8b67	16	71893986	71893986	C	G	SNP	ZNF821	ENST00000425432	human	ensembl	69_37n	-1	known	missense	c.1174	p.E392Q	0.991	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF821	HGNC	ENSG00000102984	119	0	0.00	39	16	29.09	-	-	-
