Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA13	0	genome.wustl.edu	37	7	48335359	48335359	+	Silent	SNP	T	T	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	7	48335359	48335359	T	G	SNP	ABCA13	ENST00000435803	human	ensembl	69_37n	+1	known	silent	c.9018	p.L3006	0.100	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	154	0	0.00	61	35	36.46	-	-	-
ABCE1	0	genome.wustl.edu	37	4	146042543	146042544	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	4	146042543	146042544	-	A	INS	ABCE1	ENST00000296577	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1263_1264	p.G421fs	0.977:1.000	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,pfam_RNaseL-inhib_metal-bd_dom,pfam_4Fe4S-bd_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,prints_ABC_E	-	no_errors	ABCE1	HGNC	ENSG00000164163	67	0	0.00	111	13	10.48	-	-	-
ACVR2A	0	genome.wustl.edu	37	2	148676122	148676122	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	2	148676122	148676122	C	G	SNP	ACVR2A	ENST00000241416	human	ensembl	69_37n	+1	known	missense	c.923	p.P308R	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Activin_II/TGFBeta-II_recpt	-	no_errors	ACVR2A	HGNC	ENSG00000121989	33	0	0.00	40	13	24.53	-	-	-
ADAMDEC1	0	genome.wustl.edu	37	8	24249788	24249788	+	Silent	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	8	24249788	24249788	G	A	SNP	ADAMDEC1	ENST00000256412	human	ensembl	69_37n	+1	known	silent	c.102	p.K34	0.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAMDEC1	HGNC	ENSG00000134028	65	0	0.00	57	9	13.64	-	-	-
ADCY8	0	genome.wustl.edu	37	8	131922104	131922104	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	8	131922104	131922104	C	A	SNP	ADCY8	ENST00000286355	human	ensembl	69_37n	-1	known	missense	c.1490	p.R497L	0.999	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	169	0	0.00	198	63	24.14	-	-	-
ARHGAP28	0	genome.wustl.edu	37	18	6890538	6890538	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	18	6890538	6890538	G	A	SNP	ARHGAP28	ENST00000400091	human	ensembl	69_37n	+1	known	missense	c.1844	p.R615Q	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP28	HGNC	ENSG00000088756	212	0	0.00	116	19	14.07	-	-	-
BAI1	0	genome.wustl.edu	37	8	143558834	143558835	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	8	143558834	143558835	-	C	INS	BAI1	ENST00000323289	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1311_1312	p.Q439fs	0.955:1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790	11	0	0.00	52	19	26.76	-	-	-
BAP1	0	genome.wustl.edu	37	3	52442600	52442600	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	3	52442600	52442600	G	C	SNP	BAP1	ENST00000460680	human	ensembl	69_37n	-1	known	missense	c.145	p.L49V	1.000	pfam_Peptidase_C12	pfam_Peptidase_C12,prints_Peptidase_C12	-	no_errors	BAP1	HGNC	ENSG00000163930	24	0	0.00	10	6	37.50	-	-	-
C19orf54	0	genome.wustl.edu	37	19	41248631	41248631	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	19	41248631	41248631	C	T	SNP	C19orf54	ENST00000378313	human	ensembl	69_37n	-1	known	missense	c.763	p.E255K	0.985	NULL	NULL	-	no_errors	C19orf54	HGNC	ENSG00000188493	61	0	0.00	55	19	25.68	-	-	-
C1orf101	0	genome.wustl.edu	37	1	244735979	244735979	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	1	244735979	244735979	C	G	SNP	C1orf101	ENST00000366534	human	ensembl	69_37n	+1	known	missense	c.1855	p.L619V	0.078	NULL	NULL	-	no_errors	C1orf101	HGNC	ENSG00000179397	26	0	0.00	65	13	16.67	-	-	-
CELA1	0	genome.wustl.edu	37	12	51736377	51736377	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	12	51736377	51736377	C	T	SNP	CELA1	ENST00000293636	human	ensembl	69_37n	-1	known	missense	c.308	p.S103N	0.961	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	CELA1	HGNC	ENSG00000139610	121	0	0.00	79	18	18.56	-	-	-
CELF6	0	genome.wustl.edu	37	15	72608235	72608235	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	15	72608235	72608235	G	C	SNP	CELF6	ENST00000569547	human	ensembl	69_37n	-1	known	missense	c.296	p.S99C	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF6	HGNC	ENSG00000140488	75	0	0.00	107	15	12.30	-	-	-
CHRNA10	0	genome.wustl.edu	37	11	3687755	3687755	+	Nonsense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	11	3687755	3687755	G	C	SNP	CHRNA10	ENST00000250699	human	ensembl	69_37n	-1	known	nonsense	c.935	p.S312*	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA10	HGNC	ENSG00000129749	131	0	0.00	69	13	15.85	-	-	-
COBL	0	genome.wustl.edu	37	7	51287561	51287562	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	7	51287561	51287562	-	G	INS	COBL	ENST00000395542	human	ensembl	69_37n	-1	known	frame_shift_ins	c.122_121	p.H41fs	0.000:0.000	pfam_Cordon-bleu_domain	pfam_Cordon-bleu_domain,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	COBL	HGNC	ENSG00000106078	23	0	0.00	25	4	13.79	-	-	-
COPG2	0	genome.wustl.edu	37	7	130347816	130347816	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	7	130347816	130347816	T	G	SNP	COPG2	ENST00000445977	human	ensembl	69_37n	-1	known	missense	c.234	p.Q78H	0.998	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold	-	no_errors	COPG2	HGNC	ENSG00000158623	168	0	0.00	132	20	13.16	-	-	-
DAPK3	0	genome.wustl.edu	37	19	3964285	3964285	+	Silent	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	19	3964285	3964285	C	T	SNP	DAPK3	ENST00000301264	human	ensembl	69_37n	-1	known	silent	c.510	p.A170	0.008	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DAPK3	HGNC	ENSG00000167657	128	1	0.78	88	16	15.38	-	-	-
DNAJB7	0	genome.wustl.edu	37	22	41257265	41257265	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	22	41257265	41257265	T	C	SNP	DNAJB7	ENST00000307221	human	ensembl	69_37n	-1	known	missense	c.734	p.N245S	0.000	NULL	pfam_DnaJ_N,superfamily_DnaJ_N,superfamily_ConA-like_lec_gl,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJB7	HGNC	ENSG00000172404	211	0	0.00	164	24	12.77	-	-	-
DOCK3	0	genome.wustl.edu	37	3	50816143	50816143	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	3	50816143	50816143	G	-	DEL	DOCK3	ENST00000266037	human	ensembl	69_37n	+1	known	frame_shift_del	c.75	p.V26fs	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_DOCK,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	314	0	0.00	237	86	26.22	-	-	-
DSCAM	0	genome.wustl.edu	37	21	41719830	41719830	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	21	41719830	41719830	C	A	SNP	DSCAM	ENST00000400454	human	ensembl	69_37n	-1	known	missense	c.977	p.S326I	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	DSCAM	HGNC	ENSG00000171587	76	0	0.00	195	32	14.04	-	-	-
DYRK1A	0	genome.wustl.edu	37	21	38850492	38850492	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	21	38850492	38850492	G	C	SNP	DYRK1A	ENST00000398960	human	ensembl	69_37n	+1	known	missense	c.217	p.D73H	0.998	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	DYRK1A	HGNC	ENSG00000157540	116	0	0.00	173	43	19.91	-	-	-
E2F8	0	genome.wustl.edu	37	11	19251216	19251216	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	11	19251216	19251216	C	T	SNP	E2F8	ENST00000250024	human	ensembl	69_37n	-1	known	missense	c.1678	p.D560N	0.121	NULL	pfam_E2F_TDP	-	no_errors	E2F8	HGNC	ENSG00000129173	81	0	0.00	81	11	11.96	-	-	-
EMID2	0	genome.wustl.edu	37	7	101090994	101090994	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	7	101090994	101090994	G	C	SNP	EMID2	ENST00000313669	human	ensembl	69_37n	+1	known	missense	c.311	p.R104T	1.000	pfam_EMI_domain,pfscan_EMI_domain	pfam_EMI_domain,pfam_Collagen,pfscan_EMI_domain	-	no_errors	EMID2	HGNC	ENSG00000160963	104	0	0.00	68	25	26.88	-	-	-
EPB41L1	0	genome.wustl.edu	37	20	34763629	34763629	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	20	34763629	34763629	G	A	SNP	EPB41L1	ENST00000338074	human	ensembl	69_37n	+1	known	missense	c.334	p.E112K	1.000	pfam_FERM_N,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Ez/rad/moesin	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	EPB41L1	HGNC	ENSG00000088367	222	0	0.00	148	46	23.71	-	-	-
EVC2	0	genome.wustl.edu	37	4	5564815	5564815	+	Silent	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	4	5564815	5564815	G	C	SNP	EVC2	ENST00000344408	human	ensembl	69_37n	-1	known	silent	c.3687	p.L1229	0.120	NULL	pfam_EVC2-like	-	no_errors	EVC2	HGNC	ENSG00000173040	144	0	0.00	110	46	29.49	-	-	-
EYS	0	genome.wustl.edu	37	6	65301291	65301291	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	6	65301291	65301291	G	A	SNP	EYS	ENST00000370616	human	ensembl	69_37n	-1	known	missense	c.4469	p.S1490L	0.497	NULL	pfam_Laminin_G,pfam_EGF-like_dom,superfamily_ConA-like_lec_gl,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	55	0	0.00	69	18	20.69	-	-	-
FAM171B	0	genome.wustl.edu	37	2	187611928	187611928	+	Silent	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	2	187611928	187611928	G	A	SNP	FAM171B	ENST00000304698	human	ensembl	69_37n	+1	known	silent	c.675	p.L225	0.990	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171B	HGNC	ENSG00000144369	71	0	0.00	95	18	15.93	-	-	-
FAM20B	0	genome.wustl.edu	37	1	179013003	179013003	+	Silent	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	1	179013003	179013003	C	T	SNP	FAM20B	ENST00000263733	human	ensembl	69_37n	+1	known	silent	c.21	p.V7	0.769	NULL	pfam_DUF1193	-	no_errors	FAM20B	HGNC	ENSG00000116199	137	0	0.00	127	30	18.99	-	-	-
FAM214B	0	genome.wustl.edu	37	9	35108147	35108148	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	9	35108147	35108148	-	C	INS	FAM214B	ENST00000322813	human	ensembl	69_37n	-1	known	frame_shift_ins	c.125_124	p.A42fs	0.144:0.584	NULL	NULL	-	no_errors	FAM214B	HGNC	ENSG00000005238	20	0	0.00	31	5	13.89	-	-	-
FAT4	0	genome.wustl.edu	37	4	126238784	126238784	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	4	126238784	126238784	C	G	SNP	FAT4	ENST00000394329	human	ensembl	69_37n	+1	known	missense	c.1218	p.H406Q	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	41	0	0.00	30	5	14.29	-	-	-
FNDC1	0	genome.wustl.edu	37	6	159644608	159644608	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	6	159644608	159644608	C	T	SNP	FNDC1	ENST00000297267	human	ensembl	69_37n	+1	known	missense	c.815	p.S272L	0.102	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694	237	0	0.00	292	102	25.89	-	-	-
FRMD5	0	genome.wustl.edu	37	15	44166157	44166157	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	15	44166157	44166157	G	C	SNP	FRMD5	ENST00000417257	human	ensembl	69_37n	-1	known	missense	c.1639	p.Q547E	1.000	NULL	pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	FRMD5	HGNC	ENSG00000171877	170	0	0.00	151	18	10.65	-	-	-
GBP7	0	genome.wustl.edu	37	1	89613445	89613445	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	1	89613445	89613445	C	G	SNP	GBP7	ENST00000294671	human	ensembl	69_37n	-1	known	missense	c.1170	p.K390N	0.006	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	-	no_errors	GBP7	HGNC	ENSG00000213512	158	0	0.00	176	21	10.66	-	-	-
GNPTG	0	genome.wustl.edu	37	16	1412632	1412632	+	Silent	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	16	1412632	1412632	G	A	SNP	GNPTG	ENST00000204679	human	ensembl	69_37n	+1	known	silent	c.630	p.R210	0.241	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	GNPTG	HGNC	ENSG00000090581	91	0	0.00	57	41	41.84	-	-	-
GPC5	0	genome.wustl.edu	37	13	92345967	92345967	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	13	92345967	92345967	C	A	SNP	GPC5	ENST00000377067	human	ensembl	69_37n	+1	known	missense	c.852	p.H284Q	0.684	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399	73	0	0.00	79	13	14.13	-	-	-
GUCY2C	0	genome.wustl.edu	37	12	14804406	14804406	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	12	14804406	14804406	C	A	SNP	GUCY2C	ENST00000261170	human	ensembl	69_37n	-1	known	missense	c.1645	p.G549C	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019	103	1	0.96	105	22	17.19	-	-	-
IGHV3-38	0	genome.wustl.edu	37	14	106866438	106866438	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	14	106866438	106866438	C	T	SNP	IGHV3-38	ENST00000390618	human	ensembl	69_37n	-1	known	missense	c.316	p.E106K	0.997	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV3-38	HGNC	ENSG00000211958	249	0	0.00	192	27	12.33	-	-	-
ITPKB	0	genome.wustl.edu	37	1	226924234	226924234	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	1	226924234	226924234	C	G	SNP	ITPKB	ENST00000272117	human	ensembl	69_37n	-1	known	missense	c.926	p.R309T	0.000	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772	23	0	0.00	19	4	17.39	-	-	-
KIAA0825	0	genome.wustl.edu	37	5	93739405	93739405	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	5	93739405	93739405	G	C	SNP	KIAA0825	ENST00000427991	human	ensembl	69_37n	-1	known	missense	c.2756	p.S919C	0.103	NULL	NULL	-	no_errors	KIAA0825	HGNC	ENSG00000185261	97	0	0.00	104	16	13.33	-	-	-
LCK	0	genome.wustl.edu	37	1	32741215	32741215	+	Silent	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	1	32741215	32741215	C	T	SNP	LCK	ENST00000333070	human	ensembl	69_37n	+1	known	silent	c.423	p.L141	0.476	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	LCK	HGNC	ENSG00000182866	23	0	0.00	35	10	22.22	-	-	-
LIPG	0	genome.wustl.edu	37	18	47110100	47110100	+	Silent	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	18	47110100	47110100	G	A	SNP	LIPG	ENST00000261292	human	ensembl	69_37n	+1	known	silent	c.1332	p.L444	0.026	pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pirsf_Lipoprotein_lipase_LIPH,pfscan_LipOase_LH2	pfam_Lipase_N,pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase,prints_Lipo_Lipase,prints_Lipase_hep,pfscan_LipOase_LH2	-	no_errors	LIPG	HGNC	ENSG00000101670	87	0	0.00	156	39	20.00	-	-	-
LRRC16A	0	genome.wustl.edu	37	6	25471408	25471408	+	Silent	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	6	25471408	25471408	C	T	SNP	LRRC16A	ENST00000377969	human	ensembl	69_37n	+1	known	silent	c.219	p.V73	1.000	NULL	NULL	-	no_errors	LRRC16A	HGNC	ENSG00000079691	497	0	0.00	309	45	12.71	-	-	-
MAGEL2	0	genome.wustl.edu	37	15	23889829	23889829	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	15	23889829	23889829	C	T	SNP	MAGEL2	ENST00000532292	human	ensembl	69_37n	-1	known	missense	c.1252	p.D418N	0.267	pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	30	0	0.00	22	4	15.38	-	-	-
MCTP2	0	genome.wustl.edu	37	15	94945238	94945238	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	15	94945238	94945238	T	C	SNP	MCTP2	ENST00000357742	human	ensembl	69_37n	+1	known	missense	c.2075	p.I692T	0.677	NULL	pfam_C2_Ca-dep,pfam_PRibTrfase_C,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	MCTP2	HGNC	ENSG00000140563	133	0	0.00	122	17	12.23	-	-	-
METTL4	0	genome.wustl.edu	37	18	2567036	2567036	+	Silent	SNP	A	A	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	18	2567036	2567036	A	G	SNP	METTL4	ENST00000574538	human	ensembl	69_37n	-1	known	silent	c.180	p.A60	0.004	NULL	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL4	HGNC	ENSG00000101574	73	0	0.00	88	14	13.73	-	-	-
MPDZ	0	genome.wustl.edu	37	9	13168444	13168444	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	9	13168444	13168444	C	T	SNP	MPDZ	ENST00000319217	human	ensembl	69_37n	-1	known	missense	c.3175	p.E1059K	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	72	0	0.00	58	10	14.71	-	-	-
MRPS22	0	genome.wustl.edu	37	3	139071564	139071564	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	3	139071564	139071564	G	C	SNP	MRPS22	ENST00000310776	human	ensembl	69_37n	+1	known	missense	c.808	p.G270R	1.000	pfam_Ribosomal_S22_mit	pfam_Ribosomal_S22_mit	-	no_errors	MRPS22	HGNC	ENSG00000175110	314	0	0.00	231	79	25.48	-	-	-
MUC20	0	genome.wustl.edu	37	3	195453371	195453371	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	3	195453371	195453371	A	G	SNP	MUC20	ENST00000447234	human	ensembl	69_37n	+1	known	missense	c.1897	p.K633E	0.002	NULL	NULL	-	no_errors	MUC20	HGNC	ENSG00000176945	124	0	0.00	100	25	20.00	-	-	-
MUC4	0	genome.wustl.edu	37	3	195508700	195508700	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	3	195508700	195508700	C	T	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.9751	p.V3251I	0.007	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	8	0	0.00	6	5	45.45	-	-	-
NKAPL	0	genome.wustl.edu	37	6	28227456	28227456	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	6	28227456	28227456	G	A	SNP	NKAPL	ENST00000343684	human	ensembl	69_37n	+1	known	missense	c.307	p.E103K	0.001	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134	22	0	0.00	59	15	20.27	-	-	-
NR4A2	0	genome.wustl.edu	37	2	157184493	157184493	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	2	157184493	157184493	C	A	SNP	NR4A2	ENST00000539077	human	ensembl	69_37n	-1	known	missense	c.1061	p.G354V	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,prints_Nuc_orph_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NURR_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A2	HGNC	ENSG00000153234	33	0	0.00	72	12	14.29	-	-	-
OR6X1	0	genome.wustl.edu	37	11	123624853	123624853	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	11	123624853	123624853	C	A	SNP	OR6X1	ENST00000327930	human	ensembl	69_37n	-1	known	missense	c.374	p.C125F	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR6X1	HGNC	ENSG00000221931	443	0	0.00	279	72	20.51	-	-	-
OTOF	0	genome.wustl.edu	37	2	26690299	26690299	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	2	26690299	26690299	C	G	SNP	OTOF	ENST00000272371	human	ensembl	69_37n	-1	known	missense	c.4161	p.Q1387H	0.978	NULL	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	OTOF	HGNC	ENSG00000115155	55	0	0.00	68	8	10.53	-	-	-
PAMR1	0	genome.wustl.edu	37	11	35454330	35454330	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	11	35454330	35454330	G	C	SNP	PAMR1	ENST00000278360	human	ensembl	69_37n	-1	known	missense	c.1788	p.I596M	1.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_CUB,pfam_Sushi_SCR_CCP,pfam_EGF-like_dom,superfamily_Pept_cys/ser_Trypsin-like,superfamily_CUB,superfamily_Complement_control_module,smart_EGF-like,smart_CUB,smart_EGF-like_Ca-bd,smart_Sushi_SCR_CCP,smart_Peptidase_S1_S6,pfscan_CUB,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	PAMR1	HGNC	ENSG00000149090	135	0	0.00	147	21	12.50	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	82	0	0.00	78	37	32.17	-	-	-
PITPNM1	0	genome.wustl.edu	37	11	67266143	67266143	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	11	67266143	67266143	C	T	SNP	PITPNM1	ENST00000356404	human	ensembl	69_37n	-1	known	missense	c.1408	p.E470K	0.996	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697	9	0	0.00	13	8	38.10	-	-	-
PKD1L1	0	genome.wustl.edu	37	7	47968840	47968840	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	7	47968840	47968840	C	T	SNP	PKD1L1	ENST00000289672	human	ensembl	69_37n	-1	known	missense	c.1021	p.E341K	0.000	NULL	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_LipOase_LH2,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_LipOase_LH2,pfscan_PKD_dom,pfscan_LipOase_LH2,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	68	0	0.00	54	21	27.63	-	-	-
PLD3	0	genome.wustl.edu	37	19	40880504	40880504	+	Silent	SNP	T	T	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	19	40880504	40880504	T	G	SNP	PLD3	ENST00000356508	human	ensembl	69_37n	+1	known	silent	c.996	p.T332	0.998	NULL	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD3	HGNC	ENSG00000105223	61	0	0.00	40	9	18.37	-	-	-
PPP3CA	0	genome.wustl.edu	37	4	101982313	101982313	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	4	101982313	101982313	C	G	SNP	PPP3CA	ENST00000394854	human	ensembl	69_37n	-1	known	missense	c.1087	p.E363Q	1.000	NULL	pfam_Metallo_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP3CA	HGNC	ENSG00000138814	104	0	0.00	95	39	29.10	-	-	-
PSMA3	0	genome.wustl.edu	37	14	58727739	58727739	+	Splice_Site	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	14	58727739	58727739	G	A	SNP	PSMA3	ENST00000216455	human	ensembl	69_37n	+1	known	splice_site	c.477+1	e6+1	1.000	-	-	-	no_errors	PSMA3	HGNC	ENSG00000100567	323	1	0.31	234	40	14.60	-	-	-
RALGAPB	0	genome.wustl.edu	37	20	37182575	37182575	+	Silent	SNP	T	T	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	20	37182575	37182575	T	G	SNP	RALGAPB	ENST00000262879	human	ensembl	69_37n	+1	known	silent	c.3228	p.L1076	0.985	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP	-	no_errors	RALGAPB	HGNC	ENSG00000170471	176	0	0.00	160	40	19.90	-	-	-
RANBP2	0	genome.wustl.edu	37	2	109371670	109371670	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	2	109371670	109371670	G	C	SNP	RANBP2	ENST00000283195	human	ensembl	69_37n	+1	known	missense	c.2421	p.Q807H	0.990	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR-1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201	216	0	0.00	358	81	18.45	-	-	-
RSPH4A	0	genome.wustl.edu	37	6	116949275	116949275	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	6	116949275	116949275	C	G	SNP	RSPH4A	ENST00000229554	human	ensembl	69_37n	+1	known	missense	c.1405	p.P469A	0.991	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH4A	HGNC	ENSG00000111834	90	0	0.00	220	35	13.67	-	-	-
RYR3	0	genome.wustl.edu	37	15	34156357	34156357	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	15	34156357	34156357	G	C	SNP	RYR3	ENST00000389232	human	ensembl	69_37n	+1	known	missense	c.14484	p.L4828F	0.912	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	115	0	0.00	90	20	18.18	-	-	-
SCAF1	0	genome.wustl.edu	37	19	50158041	50158042	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	19	50158041	50158042	-	C	INS	SCAF1	ENST00000360565	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3532_3533	p.T1181fs	0.839:0.934	NULL	NULL	-	no_errors	SCAF1	HGNC	ENSG00000126461	37	0	0.00	40	7	14.89	-	-	-
SLC25A18	0	genome.wustl.edu	37	22	18072980	18072980	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	22	18072980	18072980	G	A	SNP	SLC25A18	ENST00000327451	human	ensembl	69_37n	+1	known	missense	c.926	p.R309H	0.000	NULL	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A18	HGNC	ENSG00000182902	130	0	0.00	151	21	12.14	-	-	-
SMARCA4	0	genome.wustl.edu	37	19	11097047	11097047	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	19	11097047	11097047	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	69_37n	+1	known	missense	c.538	p.L180F	1.000	pfam_Gln-Leu-Gln_QLQ,smart_Gln-Leu-Gln_QLQ	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_HSA,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	30	0	0.00	24	6	20.00	-	-	-
SMC1B	0	genome.wustl.edu	37	22	45782877	45782877	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	22	45782877	45782877	A	G	SNP	SMC1B	ENST00000357450	human	ensembl	69_37n	-1	known	missense	c.1781	p.V594A	1.000	pfam_RecF/RecN/SMC,pfam_SMC_hinge,superfamily_SMC_hinge,smart_SMC_hinge	pfam_RecF/RecN/SMC,pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_t-SNARE,smart_SMC_hinge	-	no_errors	SMC1B	HGNC	ENSG00000077935	114	0	0.00	104	38	26.76	-	-	-
STAG2	0	genome.wustl.edu	37	X	123199793	123199793	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	X	123199793	123199793	A	G	SNP	STAG2	ENST00000218089	human	ensembl	69_37n	+1	known	missense	c.2093	p.H698R	1.000	superfamily_ARM-type_fold	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG2	HGNC	ENSG00000101972	139	0	0.00	91	29	24.17	-	-	-
TP53	0	genome.wustl.edu	37	17	7578443	7578445	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	17	7578443	7578445	AGA	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	in_frame_del	c.487_485	p.IY162in_frame_delN	1.000:0.976:1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	202	0	0.00	159	50	22.42	-	-	-
TRIM38	0	genome.wustl.edu	37	6	25966837	25966837	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	6	25966837	25966837	C	G	SNP	TRIM38	ENST00000349458	human	ensembl	69_37n	+1	known	missense	c.87	p.I29M	0.217	smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM38	HGNC	ENSG00000112343	344	0	0.00	270	51	15.89	-	-	-
TRIM68	0	genome.wustl.edu	37	11	4626420	4626420	+	Silent	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	11	4626420	4626420	C	T	SNP	TRIM68	ENST00000300747	human	ensembl	69_37n	-1	known	silent	c.315	p.L105	0.001	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM68	HGNC	ENSG00000167333	95	0	0.00	86	15	14.85	-	-	-
TTLL5	0	genome.wustl.edu	37	14	76147917	76147917	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	14	76147917	76147917	C	G	SNP	TTLL5	ENST00000298832	human	ensembl	69_37n	+1	known	missense	c.211	p.R71G	1.000	NULL	pfam_Tub_tyr_ligase	-	no_errors	TTLL5	HGNC	ENSG00000119685	144	0	0.00	136	17	11.04	-	-	-
TUBB4B	0	genome.wustl.edu	37	9	140137952	140137952	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	9	140137952	140137952	G	A	SNP	TUBB4B	ENST00000340384	human	ensembl	69_37n	+1	known	missense	c.1282	p.A428T	1.000	superfamily_Tub_FtsZ_C,prints_Beta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_myosin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB4B	HGNC	ENSG00000188229	11	0	0.00	12	6	33.33	-	-	-
UBR2	0	genome.wustl.edu	37	6	42571368	42571368	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	6	42571368	42571368	T	C	SNP	UBR2	ENST00000372899	human	ensembl	69_37n	+1	known	missense	c.574	p.Y192H	0.862	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR2	HGNC	ENSG00000024048	117	0	0.00	145	19	11.59	-	-	-
USH2A	0	genome.wustl.edu	37	1	216371889	216371889	+	Silent	SNP	C	C	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	1	216371889	216371889	C	T	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	silent	c.3849	p.L1283	0.001	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	103	0	0.00	215	30	12.24	-	-	-
WDR26	0	genome.wustl.edu	37	1	224592213	224592213	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	1	224592213	224592213	A	G	SNP	WDR26	ENST00000480676	human	ensembl	69_37n	-1	known	missense	c.118	p.Y40H	0.899	pfam_WD40_repeat,pfam_TIF2A_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_TIF2A_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	WDR26	HGNC	ENSG00000162923	148	0	0.00	185	62	25.10	-	-	-
WDR52	0	genome.wustl.edu	37	3	113049481	113049481	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	3	113049481	113049481	A	G	SNP	WDR52	ENST00000393845	human	ensembl	69_37n	-1	known	missense	c.3650	p.I1217T	0.991	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530	68	0	0.00	111	19	14.50	-	-	-
WDR7	0	genome.wustl.edu	37	18	54385213	54385213	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	18	54385213	54385213	A	G	SNP	WDR7	ENST00000254442	human	ensembl	69_37n	+1	known	missense	c.1597	p.I533V	0.993	superfamily_Quinonprotein_ADH-like,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157	74	0	0.00	170	32	15.84	-	-	-
WHAMMP2	0	genome.wustl.edu	37	15	28989968	28989968	+	RNA	SNP	G	G	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	15	28989968	28989968	G	T	SNP	WHAMMP2	ENST00000508764	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.204	-	-	-	no_errors	WHAMMP2	HGNC	ENSG00000248334	22	0	0.00	38	11	22.45	-	-	-
WNT9A	0	genome.wustl.edu	37	1	228111953	228111954	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	1	228111953	228111954	-	C	INS	WNT9A	ENST00000272164	human	ensembl	69_37n	-1	known	frame_shift_ins	c.501_500	p.C168fs	1.000:1.000	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt14	-	no_errors	WNT9A	HGNC	ENSG00000143816	20	0	0.00	24	3	11.11	-	-	-
ZNF217	0	genome.wustl.edu	37	20	52192934	52192934	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	20	52192934	52192934	G	A	SNP	ZNF217	ENST00000302342	human	ensembl	69_37n	-1	known	missense	c.2369	p.A790V	0.937	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF217	HGNC	ENSG00000171940	57	0	0.00	82	16	16.33	-	-	-
ZNF479	0	genome.wustl.edu	37	7	57187675	57187675	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	7	57187675	57187675	G	T	SNP	ZNF479	ENST00000331162	human	ensembl	69_37n	-1	known	missense	c.1447	p.H483N	0.982	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF479	HGNC	ENSG00000185177	34	0	0.00	73	12	13.95	-	-	-
ZNF674	0	genome.wustl.edu	37	X	46359485	46359485	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	X	46359485	46359485	G	C	SNP	ZNF674	ENST00000523374	human	ensembl	69_37n	-1	known	missense	c.1539	p.I513M	0.027	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF674	HGNC	ENSG00000251192	209	0	0.00	190	62	24.51	-	-	-
ZNF674	0	genome.wustl.edu	37	X	46359952	46359952	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EQ-01A-11W-A050-09	TCGA-A2-A0EQ-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2c449ea9-c3ff-4726-8566-5933e2b7056d	282ea476-ac8e-4aa3-ac9e-49fced7a4eb2	X	46359952	46359952	G	C	SNP	ZNF674	ENST00000523374	human	ensembl	69_37n	-1	known	missense	c.1072	p.Q358E	0.003	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF674	HGNC	ENSG00000251192	137	0	0.00	106	42	28.38	-	-	-
