Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAM19	0	genome.wustl.edu	37	5	156907994	156907994	+	Nonsense_Mutation	SNP	G	G	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	5	156907994	156907994	G	C	SNP	ADAM19	ENST00000394020	human	ensembl	69_37n	-1	known	nonsense	c.2726	p.S909*	0.022	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM19	HGNC	ENSG00000135074	101	0	0.00	67	12	15.19	-	-	-
ADAMTS20	0	genome.wustl.edu	37	12	43826141	43826141	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	12	43826141	43826141	G	A	SNP	ADAMTS20	ENST00000389420	human	ensembl	69_37n	-1	known	missense	c.3062	p.S1021F	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	183	0	0.00	126	17	11.89	-	-	-
AIM1	0	genome.wustl.edu	37	6	106967193	106967193	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	6	106967193	106967193	A	G	SNP	AIM1	ENST00000369066	human	ensembl	69_37n	+1	known	missense	c.886	p.T296A	0.000	NULL	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	AIM1	HGNC	ENSG00000112297	94	0	0.00	106	16	12.80	-	-	-
AKNA	0	genome.wustl.edu	37	9	117120303	117120303	+	Silent	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	9	117120303	117120303	G	A	SNP	AKNA	ENST00000307564	human	ensembl	69_37n	-1	known	silent	c.2637	p.S879	0.000	NULL	pfam_TF_AT-hook	-	no_errors	AKNA	HGNC	ENSG00000106948	47	0	0.00	43	8	15.69	-	-	-
ALG8	0	genome.wustl.edu	37	11	77820538	77820538	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	11	77820538	77820538	G	A	SNP	ALG8	ENST00000299626	human	ensembl	69_37n	-1	known	missense	c.988	p.P330S	0.999	pfam_Glyco_trans_ALG6/ALG8	pfam_Glyco_trans_ALG6/ALG8	-	no_errors	ALG8	HGNC	ENSG00000159063	127	0	0.00	150	23	13.29	-	-	-
ANGEL2	0	genome.wustl.edu	37	1	213180387	213180387	+	RNA	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	213180387	213180387	G	A	SNP	ANGEL2	ENST00000460337	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	ANGEL2	HGNC	ENSG00000174606	61	0	0.00	71	10	12.35	-	-	-
ANKRD17	0	genome.wustl.edu	37	4	74043217	74043217	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	4	74043217	74043217	C	T	SNP	ANKRD17	ENST00000558247	human	ensembl	69_37n	-1	known	nonsense	c.81	p.W27*	1.000	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ANKRD17	HGNC	ENSG00000132466	333	0	0.00	247	38	13.33	-	-	-
ARHGAP29	0	genome.wustl.edu	37	1	94643587	94643587	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	94643587	94643587	G	A	SNP	ARHGAP29	ENST00000260526	human	ensembl	69_37n	-1	known	missense	c.2617	p.R873C	0.066	superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	ARHGAP29	HGNC	ENSG00000137962	202	0	0.00	182	23	11.22	-	-	-
ATP5A1	0	genome.wustl.edu	37	18	43667040	43667040	+	Silent	SNP	T	T	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	18	43667040	43667040	T	G	SNP	ATP5A1	ENST00000282050	human	ensembl	69_37n	-1	known	silent	c.1110	p.I370	0.959	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,tigrfam_ATPase_F1-cplx_asu	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,pfam_ATPase_F1/V1/A1-cplx_a/bsu_C,pfam_ATPase_F1/V1/A1-cplx_a/bsu_N,superfamily_ATPase_F1/V1/A1-cplx_a/bsu_C,superfamily_ATPase_F1/A1-cplx_a/bsu_N,tigrfam_ATPase_F1-cplx_asu	-	no_errors	ATP5A1	HGNC	ENSG00000152234	163	0	0.00	86	35	28.93	-	-	-
ATP6V0B	0	genome.wustl.edu	37	1	44442306	44442306	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	44442306	44442306	C	A	SNP	ATP6V0B	ENST00000472174	human	ensembl	69_37n	+1	known	missense	c.323	p.A108E	1.000	pfam_ATPase_F0/V0-cplx_csu,superfamily_ATPase_F0/V0-cplx_csu	pfam_ATPase_F0/V0-cplx_csu,superfamily_ATPase_F0/V0-cplx_csu,prints_ATPase_V0-cplx_csu	-	no_errors	ATP6V0B	HGNC	ENSG00000117410	110	0	0.00	41	8	16.33	-	-	-
B3GALT4	0	genome.wustl.edu	37	6	33245209	33245209	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	6	33245209	33245209	C	A	SNP	B3GALT4	ENST00000451237	human	ensembl	69_37n	+1	known	missense	c.13	p.L5I	0.131	NULL	pfam_Glyco_trans_31	-	no_errors	B3GALT4	HGNC	ENSG00000235863	53	0	0.00	27	4	12.90	-	-	-
BCOR	0	genome.wustl.edu	37	X	39932241	39932241	+	Silent	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	X	39932241	39932241	C	T	SNP	BCOR	ENST00000378444	human	ensembl	69_37n	-1	known	silent	c.2358	p.K786	0.703	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337	94	0	0.00	117	14	10.69	-	-	-
CATSPERG	0	genome.wustl.edu	37	19	38853402	38853402	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	19	38853402	38853402	C	T	SNP	CATSPERG	ENST00000409235	human	ensembl	69_37n	+1	known	missense	c.2405	p.A802V	0.319	NULL	NULL	-	no_errors	CATSPERG	HGNC	ENSG00000099338	85	0	0.00	102	14	11.97	-	-	-
CCDC112	0	genome.wustl.edu	37	5	114611095	114611095	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	5	114611095	114611095	G	A	SNP	CCDC112	ENST00000379611	human	ensembl	69_37n	-1	known	nonsense	c.736	p.R246*	1.000	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221	285	0	0.00	172	51	22.87	-	-	-
CCDC66	0	genome.wustl.edu	37	3	56653531	56653531	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	3	56653531	56653531	G	A	SNP	CCDC66	ENST00000394672	human	ensembl	69_37n	+1	known	missense	c.2611	p.D871N	0.517	NULL	NULL	-	no_errors	CCDC66	HGNC	ENSG00000180376	369	1	0.27	194	32	14.10	-	-	-
CCNE1	0	genome.wustl.edu	37	19	30313457	30313457	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	19	30313457	30313457	G	A	SNP	CCNE1	ENST00000262643	human	ensembl	69_37n	+1	known	missense	c.1057	p.A353T	0.225	pfam_Cyclin_C,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNE1	HGNC	ENSG00000105173	123	0	0.00	119	53	30.64	-	-	-
CCR7	0	genome.wustl.edu	37	17	38711716	38711716	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	17	38711716	38711716	T	A	SNP	CCR7	ENST00000246657	human	ensembl	69_37n	-1	known	missense	c.415	p.S139C	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_7TM_GPCR_Rhodpsn,prints_Chemokine_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Chemokine_CCR7,prints_7TM_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CXCR4,prints_Chemokine_CCR11,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	CCR7	HGNC	ENSG00000126353	102	0	0.00	93	20	17.70	-	-	-
CDC14A	0	genome.wustl.edu	37	1	100921011	100921011	+	Silent	SNP	A	A	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	100921011	100921011	A	G	SNP	CDC14A	ENST00000361544	human	ensembl	69_37n	+1	known	silent	c.570	p.A190	0.997	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	CDC14A	HGNC	ENSG00000079335	243	0	0.00	116	26	18.31	-	-	-
CDCA7L	0	genome.wustl.edu	37	7	21947807	21947807	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	21947807	21947807	G	T	SNP	CDCA7L	ENST00000406877	human	ensembl	69_37n	-1	known	missense	c.622	p.Q208K	0.900	NULL	pfam_Znf-4CXXC_R1	-	no_errors	CDCA7L	HGNC	ENSG00000164649	77	0	0.00	52	11	17.46	-	-	-
CDKAL1	0	genome.wustl.edu	37	6	21201369	21201369	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	6	21201369	21201369	T	G	SNP	CDKAL1	ENST00000274695	human	ensembl	69_37n	+1	known	missense	c.1412	p.M471R	1.000	pfam_TRAM_dom,pfscan_TRAM_dom,tigrfam_MiaB-like_B,tigrfam_Methylthiotransferase	pfam_Methylthiotransferase_N,pfam_rSAM,pfam_TRAM_dom,smart_Elp3/MiaB/NifB,pfscan_TRAM_dom,tigrfam_MiaB-like_B,tigrfam_Methylthiotransferase	-	no_errors	CDKAL1	HGNC	ENSG00000145996	297	1	0.33	275	62	18.40	-	-	-
CERS2	0	genome.wustl.edu	37	1	150941434	150941434	+	Silent	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	150941434	150941434	G	A	SNP	CERS2	ENST00000271688	human	ensembl	69_37n	-1	known	silent	c.133	p.L45	1.000	pirsf_Longevity_assurance_LAG1_LAC1	pirsf_Longevity_assurance_LAG1_LAC1,pfam_TLC-dom,pfam_Homeodomain,superfamily_Homeodomain-like,smart_TLC-dom,pfscan_TLC-dom,pfscan_Homeodomain	-	no_errors	CERS2	HGNC	ENSG00000143418	73	0	0.00	97	18	15.65	-	-	-
CHD9	0	genome.wustl.edu	37	16	53279531	53279531	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	16	53279531	53279531	A	C	SNP	CHD9	ENST00000398510	human	ensembl	69_37n	+1	known	missense	c.3223	p.K1075Q	1.000	pfam_SNF2_N	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	174	0	0.00	156	46	22.77	-	-	-
CHIA	0	genome.wustl.edu	37	1	111854943	111854943	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	111854943	111854943	A	G	SNP	CHIA	ENST00000343320	human	ensembl	69_37n	+1	known	missense	c.187	p.N63D	0.009	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,pfam_Chitin-bd_dom,superfamily_Glycoside_hydrolase_SF,superfamily_Chitin-bd_dom,smart_Chitinase_II,smart_Chitin-bd_dom,pfscan_Chitin-bd_dom	-	no_errors	CHIA	HGNC	ENSG00000134216	252	0	0.00	173	25	12.63	-	-	-
CLASP2	0	genome.wustl.edu	37	3	33668523	33668523	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	3	33668523	33668523	A	G	SNP	CLASP2	ENST00000399362	human	ensembl	69_37n	-1	known	missense	c.992	p.I331T	1.000	pfam_CLASP_N_dom,superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC	ENSG00000163539	49	0	0.00	30	5	14.29	-	-	-
CNTLN	0	genome.wustl.edu	37	9	17235769	17235769	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	9	17235769	17235769	A	T	SNP	CNTLN	ENST00000380647	human	ensembl	69_37n	+1	known	missense	c.648	p.K216N	1.000	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	482	0	0.00	273	64	18.99	-	-	-
CNTN4	0	genome.wustl.edu	37	3	3080650	3080650	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	3	3080650	3080650	G	A	SNP	CNTN4	ENST00000397461	human	ensembl	69_37n	+1	known	missense	c.2126	p.G709D	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	CNTN4	HGNC	ENSG00000144619	81	0	0.00	47	19	28.79	-	-	-
COG3	0	genome.wustl.edu	37	13	46065675	46065675	+	Splice_Site	SNP	T	T	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	13	46065675	46065675	T	C	SNP	COG3	ENST00000349995	human	ensembl	69_37n	+1	known	splice_site	c.1095+2	e10+2	1.000	-	-	-	no_errors	COG3	HGNC	ENSG00000136152	208	0	0.00	126	17	11.89	-	-	-
CPA1	0	genome.wustl.edu	37	7	130025723	130025723	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	130025723	130025723	A	G	SNP	CPA1	ENST00000011292	human	ensembl	69_37n	+1	known	missense	c.1031	p.Y344C	0.999	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA1	HGNC	ENSG00000091704	19	0	0.00	22	7	24.14	-	-	-
DAPK1	0	genome.wustl.edu	37	9	90220079	90220079	+	Silent	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	9	90220079	90220079	G	T	SNP	DAPK1	ENST00000469640	human	ensembl	69_37n	+1	known	silent	c.273	p.L91	0.859	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_Prot_kinase_cat_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	72	0	0.00	72	14	16.28	-	-	-
DEFB115	0	genome.wustl.edu	37	20	29847380	29847380	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	20	29847380	29847380	A	T	SNP	DEFB115	ENST00000400552	human	ensembl	69_37n	+1	known	missense	c.212	p.K71M	0.015	NULL	NULL	-	no_errors	DEFB115	HGNC	ENSG00000215547	188	0	0.00	277	50	15.29	-	-	-
ELOVL6	0	genome.wustl.edu	37	4	110980805	110980805	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	4	110980805	110980805	G	C	SNP	ELOVL6	ENST00000394607	human	ensembl	69_37n	-1	known	missense	c.327	p.S109R	1.000	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL6	HGNC	ENSG00000170522	168	1	0.59	178	20	10.10	-	-	-
EPB41L1	0	genome.wustl.edu	37	20	34775661	34775661	+	Nonsense_Mutation	SNP	C	C	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	20	34775661	34775661	C	G	SNP	EPB41L1	ENST00000338074	human	ensembl	69_37n	+1	known	nonsense	c.849	p.Y283*	0.174	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	EPB41L1	HGNC	ENSG00000088367	81	0	0.00	85	25	22.73	-	-	-
EXT1	0	genome.wustl.edu	37	8	118842508	118842508	+	Nonsense_Mutation	SNP	A	A	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	8	118842508	118842508	A	C	SNP	EXT1	ENST00000378204	human	ensembl	69_37n	-1	known	nonsense	c.1245	p.Y415*	1.000	NULL	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT1	HGNC	ENSG00000182197	125	0	0.00	86	84	49.12	-	-	-
GLUL	0	genome.wustl.edu	37	1	182354560	182354560	+	Silent	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	182354560	182354560	C	T	SNP	GLUL	ENST00000311223	human	ensembl	69_37n	-1	known	silent	c.735	p.G245	0.004	pfam_Gln_synth_cat_dom	pfam_Gln_synth_cat_dom,pfam_Gln_synt_beta,superfamily_Gln_synt_beta	-	no_errors	GLUL	HGNC	ENSG00000135821	96	0	0.00	126	18	12.50	-	-	-
GRIK2	0	genome.wustl.edu	37	6	102124623	102124623	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	6	102124623	102124623	G	C	SNP	GRIK2	ENST00000421544	human	ensembl	69_37n	+1	known	missense	c.667	p.E223Q	1.000	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	152	0	0.00	79	14	15.05	-	-	-
GTF2IRD2P1	0	genome.wustl.edu	37	7	72658101	72658101	+	RNA	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	72658101	72658101	G	A	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	91	0	0.00	99	29	22.48	-	-	-
HEG1	0	genome.wustl.edu	37	3	124748125	124748125	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	3	124748125	124748125	G	C	SNP	HEG1	ENST00000311127	human	ensembl	69_37n	-1	known	missense	c.524	p.S175C	0.180	NULL	pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	-	no_errors	HEG1	HGNC	ENSG00000173706	74	0	0.00	54	9	14.29	-	-	-
HIPK2	0	genome.wustl.edu	37	7	139305147	139305147	+	Silent	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	139305147	139305147	C	T	SNP	HIPK2	ENST00000406875	human	ensembl	69_37n	-1	known	silent	c.1782	p.Q594	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	HIPK2	HGNC	ENSG00000064393	328	0	0.00	215	31	12.60	-	-	-
HIPK2	0	genome.wustl.edu	37	7	139416107	139416107	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	139416107	139416107	C	A	SNP	HIPK2	ENST00000406875	human	ensembl	69_37n	-1	known	nonsense	c.727	p.E243*	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	HIPK2	HGNC	ENSG00000064393	183	0	0.00	203	23	10.18	-	-	-
HNF4A	0	genome.wustl.edu	37	20	43042402	43042402	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	20	43042402	43042402	A	T	SNP	HNF4A	ENST00000316099	human	ensembl	69_37n	+1	known	missense	c.454	p.I152F	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4A	HGNC	ENSG00000101076	35	0	0.00	39	7	15.22	-	-	-
HUWE1	0	genome.wustl.edu	37	X	53644083	53644083	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	X	53644083	53644083	C	G	SNP	HUWE1	ENST00000262854	human	ensembl	69_37n	-1	known	missense	c.1805	p.G602A	1.000	pfam_E3_Ub_ligase_DUF913,superfamily_ARM-type_fold	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/transl_elong_EF1B_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	124	0	0.00	101	14	12.17	-	-	-
IFNA10	0	genome.wustl.edu	37	9	21206600	21206600	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	9	21206600	21206600	A	C	SNP	IFNA10	ENST00000357374	human	ensembl	69_37n	-1	known	missense	c.497	p.V166G	0.013	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA10	HGNC	ENSG00000186803	637	6	0.93	454	75	14.15	-	-	-
IFT46	0	genome.wustl.edu	37	11	118416559	118416559	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	11	118416559	118416559	G	T	SNP	IFT46	ENST00000264020	human	ensembl	69_37n	-1	known	missense	c.835	p.P279T	1.000	pfam_Intraflagellar_transp_cmplxB	pfam_Intraflagellar_transp_cmplxB	-	no_errors	IFT46	HGNC	ENSG00000118096	81	0	0.00	78	33	29.73	-	-	-
IFT52	0	genome.wustl.edu	37	20	42275617	42275617	+	Silent	SNP	T	T	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	20	42275617	42275617	T	C	SNP	IFT52	ENST00000373030	human	ensembl	69_37n	+1	known	silent	c.1308	p.N436	0.855	NULL	pfam_ABC_transp_unknown	-	no_errors	IFT52	HGNC	ENSG00000101052	128	0	0.00	184	74	28.68	-	-	-
INPP5J	0	genome.wustl.edu	37	22	31522391	31522391	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	22	31522391	31522391	C	A	SNP	INPP5J	ENST00000331075	human	ensembl	69_37n	+1	known	missense	c.1301	p.T434N	0.994	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	-	no_errors	INPP5J	HGNC	ENSG00000185133	44	0	0.00	38	5	11.36	-	-	-
IQCD	0	genome.wustl.edu	37	12	113633529	113633529	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	12	113633529	113633529	C	G	SNP	IQCD	ENST00000416617	human	ensembl	69_37n	-1	known	missense	c.1201	p.V401L	0.985	smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCD	HGNC	ENSG00000166578	69	0	0.00	66	17	20.48	-	-	-
IRAK2	0	genome.wustl.edu	37	3	10255044	10255044	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	3	10255044	10255044	C	T	SNP	IRAK2	ENST00000256458	human	ensembl	69_37n	+1	known	missense	c.682	p.H228Y	0.086	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death,superfamily_Kinase-like_dom,superfamily_DEATH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	IRAK2	HGNC	ENSG00000134070	54	0	0.00	79	10	11.24	-	-	-
JAK2	0	genome.wustl.edu	37	9	5022119	5022119	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	9	5022119	5022119	C	A	SNP	JAK2	ENST00000381652	human	ensembl	69_37n	+1	known	nonsense	c.132	p.Y44*	0.996	smart_Band_41_domain,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak2,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK2	HGNC	ENSG00000096968	548	0	0.00	289	150	34.17	-	-	-
KCNQ5	0	genome.wustl.edu	37	6	73900398	73900398	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	6	73900398	73900398	G	T	SNP	KCNQ5	ENST00000402622	human	ensembl	69_37n	+1	known	missense	c.1710	p.M570I	1.000	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ5	HGNC	ENSG00000185760	125	0	0.00	99	23	18.85	-	-	-
KIF20B	0	genome.wustl.edu	37	10	91497158	91497158	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	10	91497158	91497158	A	T	SNP	KIF20B	ENST00000416354	human	ensembl	69_37n	+1	known	missense	c.2650	p.S884C	0.000	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20B	HGNC	ENSG00000138182	229	0	0.00	141	16	10.19	-	-	-
KIT	0	genome.wustl.edu	37	4	55589813	55589813	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	4	55589813	55589813	G	A	SNP	KIT	ENST00000288135	human	ensembl	69_37n	+1	known	missense	c.1295	p.G432E	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	KIT	HGNC	ENSG00000157404	94	0	0.00	34	14	29.17	-	-	-
KRT3	0	genome.wustl.edu	37	12	53184633	53184633	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	12	53184633	53184633	G	A	SNP	KRT3	ENST00000309505	human	ensembl	69_37n	-1	known	missense	c.1562	p.A521V	0.999	NULL	pfam_F,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT3	HGNC	ENSG00000186442	31	0	0.00	40	6	13.04	-	-	-
LGR5	0	genome.wustl.edu	37	12	71978313	71978313	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	12	71978313	71978313	G	T	SNP	LGR5	ENST00000266674	human	ensembl	69_37n	+1	known	missense	c.2523	p.W841C	1.000	NULL	pfam_Leu-rich_rpt,pfam_7TM_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pfscan_GPCR_Rhodpsn_supfam,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	LGR5	HGNC	ENSG00000139292	252	0	0.00	263	45	14.61	-	-	-
LMX1A	0	genome.wustl.edu	37	1	165173228	165173228	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	165173228	165173228	A	T	SNP	LMX1A	ENST00000294816	human	ensembl	69_37n	-1	known	missense	c.1038	p.S346R	1.000	NULL	pfam_Znf_LIM,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeodomain,pfscan_Znf_LIM,pfscan_Homeodomain	-	no_errors	LMX1A	HGNC	ENSG00000162761	88	0	0.00	54	12	17.91	-	-	-
LOXL4	0	genome.wustl.edu	37	10	100015449	100015449	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	10	100015449	100015449	C	A	SNP	LOXL4	ENST00000260702	human	ensembl	69_37n	-1	known	missense	c.1476	p.M492I	1.000	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt	pfam_Lysyl_oxidase,pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt,prints_Lysyl_oxidase,prints_Srcr_rcpt	-	no_errors	LOXL4	HGNC	ENSG00000138131	40	0	0.00	28	7	20.00	-	-	-
LZTS1	0	genome.wustl.edu	37	8	20112577	20112577	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	8	20112577	20112577	T	C	SNP	LZTS1	ENST00000265801	human	ensembl	69_37n	-1	known	missense	c.116	p.D39G	0.999	NULL	pfam_Fez1	-	no_errors	LZTS1	HGNC	ENSG00000061337	60	0	0.00	22	8	26.67	-	-	-
MACF1	0	genome.wustl.edu	37	1	39799640	39799640	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	39799640	39799640	T	G	SNP	MACF1	ENST00000567887	human	ensembl	69_37n	+1	putative	missense	c.7491	p.I2497M	0.154	superfamily_RNaseH-like_dom,smart_Plectin_repeat	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	MACF1	HGNC	ENSG00000127603	322	0	0.00	213	29	11.98	-	-	-
MGAM	0	genome.wustl.edu	37	7	141766522	141766522	+	Splice_Site	SNP	G	G	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	141766522	141766522	G	C	SNP	MGAM	ENST00000475668	human	ensembl	69_37n	+1	putative	splice_site	c.4919+1	e40+1	1.000	-	-	-	no_errors	MGAM	HGNC	ENSG00000257335	85	0	0.00	71	16	18.39	-	-	-
MGAM	0	genome.wustl.edu	37	7	141802435	141802435	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	141802435	141802435	T	G	SNP	MGAM	ENST00000549489	human	ensembl	69_37n	+1	known	missense	c.5281	p.Y1761D	0.818	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	77	0	0.00	56	22	28.21	-	-	-
MTRR	0	genome.wustl.edu	37	5	7878078	7878078	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	5	7878078	7878078	G	A	SNP	MTRR	ENST00000510525	human	ensembl	69_37n	+1	known	missense	c.448	p.V150M	0.030	pfam_Flavodoxin/NO_synth,pfscan_Flavodoxin/NO_synth	pfam_Flavodoxin/NO_synth,pfam_FAD-binding_1,superfamily_Riboflavin_synthase-like_b-brl,pfscan_Flavodoxin/NO_synth,prints_Flavdoxin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MTRR	HGNC	ENSG00000124275	118	0	0.00	125	19	13.10	-	-	-
MYO1B	0	genome.wustl.edu	37	2	192250662	192250662	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	2	192250662	192250662	C	A	SNP	MYO1B	ENST00000304164	human	ensembl	69_37n	+1	known	missense	c.1406	p.T469K	0.985	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1B	HGNC	ENSG00000128641	389	0	0.00	317	53	14.32	-	-	-
NAV2	0	genome.wustl.edu	37	11	20119207	20119207	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	11	20119207	20119207	C	G	SNP	NAV2	ENST00000396087	human	ensembl	69_37n	+1	known	missense	c.6274	p.R2092G	1.000	NULL	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	105	0	0.00	138	32	18.82	-	-	-
NEDD9	0	genome.wustl.edu	37	6	11213899	11213899	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	6	11213899	11213899	C	T	SNP	NEDD9	ENST00000379446	human	ensembl	69_37n	-1	known	missense	c.74	p.R25H	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859	194	0	0.00	195	26	11.76	-	-	-
NFASC	0	genome.wustl.edu	37	1	204966311	204966311	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	204966311	204966311	G	T	SNP	NFASC	ENST00000367172	human	ensembl	69_37n	+1	known	missense	c.3117	p.L1039F	0.915	superfamily_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	NFASC	HGNC	ENSG00000163531	28	0	0.00	51	8	13.33	-	-	-
NKAPL	0	genome.wustl.edu	37	6	28227179	28227179	+	Silent	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	6	28227179	28227179	C	A	SNP	NKAPL	ENST00000343684	human	ensembl	69_37n	+1	known	silent	c.30	p.S10	0.000	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134	41	0	0.00	20	5	20.00	-	-	-
NLRC5	0	genome.wustl.edu	37	16	57104491	57104491	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	16	57104491	57104491	T	C	SNP	NLRC5	ENST00000262510	human	ensembl	69_37n	+1	known	missense	c.4628	p.M1543T	0.371	smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853	26	0	0.00	20	4	16.67	-	-	-
NMUR2	0	genome.wustl.edu	37	5	151777641	151777641	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	5	151777641	151777641	T	G	SNP	NMUR2	ENST00000255262	human	ensembl	69_37n	-1	known	missense	c.791	p.K264T	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_NeuromedU_rcpt_2,prints_NeuromedU_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	NMUR2	HGNC	ENSG00000132911	259	0	0.00	167	22	11.64	-	-	-
OMA1	0	genome.wustl.edu	37	1	59004723	59004723	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	59004723	59004723	G	C	SNP	OMA1	ENST00000371226	human	ensembl	69_37n	-1	known	missense	c.244	p.L82V	0.000	NULL	pfam_Peptidase_M48	-	no_errors	OMA1	HGNC	ENSG00000162600	505	0	0.00	310	40	11.40	-	-	-
OR10A7	0	genome.wustl.edu	37	12	55614826	55614826	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	12	55614826	55614826	C	A	SNP	OR10A7	ENST00000326258	human	ensembl	69_37n	+1	known	missense	c.18	p.H6Q	0.179	NULL	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR10A7	HGNC	ENSG00000179919	536	0	0.00	456	96	17.39	-	-	-
PCNT	0	genome.wustl.edu	37	21	47775512	47775512	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	21	47775512	47775512	G	A	SNP	PCNT	ENST00000359568	human	ensembl	69_37n	+1	known	missense	c.1907	p.R636H	0.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	27	0	0.00	24	5	17.24	-	-	-
PCSK1	0	genome.wustl.edu	37	5	95746673	95746673	+	Silent	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	5	95746673	95746673	C	A	SNP	PCSK1	ENST00000311106	human	ensembl	69_37n	-1	known	silent	c.900	p.G300	0.986	pfam_Peptidase_S8/S53,superfamily_Peptidase_S8/S53	pfam_Peptidase_S8/S53,pfam_PrprotnconvertsP,pfam_Proho_convert,superfamily_Peptidase_S8/S53,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK1	HGNC	ENSG00000175426	277	1	0.36	149	31	17.03	-	-	-
PMFBP1	0	genome.wustl.edu	37	16	72170703	72170703	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	16	72170703	72170703	G	T	SNP	PMFBP1	ENST00000537465	human	ensembl	69_37n	-1	known	missense	c.934	p.Q312K	0.774	NULL	NULL	-	no_errors	PMFBP1	HGNC	ENSG00000118557	87	0	0.00	45	14	23.73	-	-	-
PPEF2	0	genome.wustl.edu	37	4	76782042	76782042	+	Silent	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	4	76782042	76782042	G	A	SNP	PPEF2	ENST00000286719	human	ensembl	69_37n	-1	known	silent	c.2040	p.T680	0.767	pirsf_Ser/Thr-Pase_EF-hand_contain,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	pirsf_Ser/Thr-Pase_EF-hand_contain,pfam_Metallo_PEstase_dom,pfam_PPP_dom,smart_Ser/Thr-sp_prot-phosphatase,smart_EF_hand_Ca-bd,prints_Ser/Thr-sp_prot-phosphatase,pfscan_EF_HAND_2	-	no_errors	PPEF2	HGNC	ENSG00000156194	178	0	0.00	123	15	10.87	-	-	-
PPP5C	0	genome.wustl.edu	37	19	46890423	46890423	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	19	46890423	46890423	G	A	SNP	PPP5C	ENST00000478046	human	ensembl	69_37n	+1	known	missense	c.974	p.R325K	1.000	pfam_Metallo_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,pirsf_Ser/Thr_PPase_5	pfam_Metallo_PEstase_dom,pfam_PPP_dom,pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,smart_Ser/Thr-sp_prot-phosphatase,pirsf_Ser/Thr_PPase_5,prints_Ser/Thr-sp_prot-phosphatase,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PPP5C	HGNC	ENSG00000011485	42	0	0.00	46	7	13.21	-	-	-
PRSS35	0	genome.wustl.edu	37	6	84233451	84233451	+	Silent	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	6	84233451	84233451	G	A	SNP	PRSS35	ENST00000369700	human	ensembl	69_37n	+1	known	silent	c.291	p.R97	0.026	NULL	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like	-	no_errors	PRSS35	HGNC	ENSG00000146250	210	0	0.00	84	64	43.24	-	-	-
PSG11	0	genome.wustl.edu	37	19	43530506	43530506	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	19	43530506	43530506	G	C	SNP	PSG11	ENST00000320078	human	ensembl	69_37n	-1	known	missense	c.19	p.P7A	0.010	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	PSG11	HGNC	ENSG00000243130	187	0	0.00	193	25	11.47	-	-	-
RAPGEFL1	0	genome.wustl.edu	37	17	38345157	38345157	+	Silent	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	17	38345157	38345157	G	A	SNP	RAPGEFL1	ENST00000264644	human	ensembl	69_37n	+1	known	silent	c.255	p.K85	0.995	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	-	no_errors	RAPGEFL1	HGNC	ENSG00000108352	23	0	0.00	34	8	19.05	-	-	-
RBM23	0	genome.wustl.edu	37	14	23371049	23371049	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	14	23371049	23371049	G	A	SNP	RBM23	ENST00000553884	human	ensembl	69_37n	-1	putative	missense	c.613	p.L205F	0.976	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	RBM23	HGNC	ENSG00000100461	452	0	0.00	484	60	11.01	-	-	-
RINT1	0	genome.wustl.edu	37	7	105187507	105187507	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	105187507	105187507	A	T	SNP	RINT1	ENST00000257700	human	ensembl	69_37n	+1	known	missense	c.666	p.K222N	1.000	NULL	pfam_RINT1_TIP1	-	no_errors	RINT1	HGNC	ENSG00000135249	130	0	0.00	161	37	18.69	-	-	-
SACS	0	genome.wustl.edu	37	13	23929666	23929666	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	13	23929666	23929666	T	-	DEL	SACS	ENST00000382292	human	ensembl	69_37n	-1	known	frame_shift_del	c.1085	p.K362fs	0.011	NULL	pfam_HEPN,pfam_Ubiquitin,superfamily_ATPase-like_ATP-bd,superfamily_DnaJ_N,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_N,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	133	0	0.00	112	14	11.11	-	-	-
SEMA7A	0	genome.wustl.edu	37	15	74707008	74707009	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	15	74707008	74707009	-	A	INS	SEMA7A	ENST00000261918	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1174_1173	p.E391fs	0.998:0.992	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like	-	no_errors	SEMA7A	HGNC	ENSG00000138623	46	0	0.00	30	10	25.00	-	-	-
SIPA1L1	0	genome.wustl.edu	37	14	72055185	72055185	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	14	72055185	72055185	G	C	SNP	SIPA1L1	ENST00000555818	human	ensembl	69_37n	+1	known	missense	c.596	p.G199A	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP	-	no_errors	SIPA1L1	HGNC	ENSG00000197555	419	0	0.00	192	45	18.99	-	-	-
SLC26A5	0	genome.wustl.edu	37	7	103051936	103051936	+	Silent	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	7	103051936	103051936	G	T	SNP	SLC26A5	ENST00000306312	human	ensembl	69_37n	-1	known	silent	c.501	p.G167	0.272	tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A5	HGNC	ENSG00000170615	247	0	0.00	168	20	10.64	-	-	-
SLC35F2	0	genome.wustl.edu	37	11	107676086	107676086	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	11	107676086	107676086	G	T	SNP	SLC35F2	ENST00000429869	human	ensembl	69_37n	-1	known	missense	c.730	p.L244I	1.000	pfam_DUF914_euk,pfam_DMT,pfam_UAA,pfam_DUF250	pfam_DUF914_euk,pfam_DMT,pfam_UAA,pfam_DUF250	-	no_errors	SLC35F2	HGNC	ENSG00000110660	131	0	0.00	153	52	25.37	-	-	-
SLFN12L	0	genome.wustl.edu	37	17	33807026	33807026	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	17	33807026	33807026	G	A	SNP	SLFN12L	ENST00000449046	human	ensembl	69_37n	-1	known	missense	c.296	p.A99V	0.015	NULL	pfam_ATPase_AAA-4	-	no_errors	SLFN12L	HGNC	ENSG00000205045	233	2	0.85	254	30	10.56	-	-	-
SNAP47	0	genome.wustl.edu	37	1	227935803	227935803	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	227935803	227935803	G	A	SNP	SNAP47	ENST00000426344	human	ensembl	69_37n	+1	known	missense	c.475	p.D159N	0.953	NULL	pfscan_T_SNARE_dom	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SNAP47	HGNC	ENSG00000143740	59	0	0.00	57	26	31.33	-	-	-
SNORD115-18	0	genome.wustl.edu	37	15	25448374	25448374	+	RNA	SNP	G	G	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	15	25448374	25448374	G	T	SNP	SNORD115-18	ENST00000363293	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SNORD115-18	HGNC	ENSG00000200163	38	0	0.00	61	14	18.67	-	-	-
SNX20	0	genome.wustl.edu	37	16	50707754	50707754	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	16	50707754	50707754	G	A	SNP	SNX20	ENST00000330943	human	ensembl	69_37n	-1	known	missense	c.514	p.R172C	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX20	HGNC	ENSG00000167208	15	0	0.00	11	4	26.67	-	-	-
STAT4	0	genome.wustl.edu	37	2	191931190	191931190	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	2	191931190	191931190	T	C	SNP	STAT4	ENST00000358470	human	ensembl	69_37n	-1	known	missense	c.596	p.Q199R	1.000	pfam_STAT_TF_alpha,superfamily_STAT_TF_coiled-coil	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT4	HGNC	ENSG00000138378	156	1	0.63	107	20	15.75	-	-	-
SULT1A4	0	genome.wustl.edu	37	16	30212154	30212154	+	Silent	SNP	A	A	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	16	30212154	30212154	A	G	SNP	SULT1A4	ENST00000338971	human	ensembl	69_37n	+1	known	silent	c.105	p.Q35	0.053	NULL	pfam_Sulfotransferase_dom	-	no_errors	SULT1A3	Clone_based_vega_gene	ENSG00000261052	11	0	0.00	4	5	55.56	-	-	-
SUPT16H	0	genome.wustl.edu	37	14	21831260	21831260	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	14	21831260	21831260	C	G	SNP	SUPT16H	ENST00000216297	human	ensembl	69_37n	-1	known	missense	c.1444	p.A482P	1.000	NULL	pfam_FACT_Spt16p,pfam_Pept_M24_structural-domain,pfam_DUF1747,superfamily_Pept_M24_structural-domain	-	no_errors	SUPT16H	HGNC	ENSG00000092201	212	0	0.00	255	31	10.84	-	-	-
SYNE2	0	genome.wustl.edu	37	14	64519171	64519171	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	14	64519171	64519171	A	C	SNP	SYNE2	ENST00000358025	human	ensembl	69_37n	+1	known	missense	c.8540	p.Q2847P	0.715	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	220	0	0.00	131	22	14.38	-	-	-
TEKT2	0	genome.wustl.edu	37	1	36550806	36550806	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	36550806	36550806	A	T	SNP	TEKT2	ENST00000207457	human	ensembl	69_37n	+1	known	missense	c.199	p.R67W	1.000	pfam_Tektin	pfam_Tektin,superfamily_Prefoldin,prints_Tektin	-	no_errors	TEKT2	HGNC	ENSG00000092850	53	0	0.00	27	12	30.77	-	-	-
TMEM156	0	genome.wustl.edu	37	4	38990517	38990517	+	Silent	SNP	A	A	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	4	38990517	38990517	A	C	SNP	TMEM156	ENST00000381938	human	ensembl	69_37n	-1	known	silent	c.693	p.T231	0.735	NULL	NULL	-	no_errors	TMEM156	HGNC	ENSG00000121895	310	0	0.00	284	39	12.07	-	-	-
TMTC2	0	genome.wustl.edu	37	12	83359523	83359523	+	Silent	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	12	83359523	83359523	G	A	SNP	TMTC2	ENST00000321196	human	ensembl	69_37n	+1	known	silent	c.1869	p.E623	1.000	pfam_TPR-1,pfam_TPR_2,pfam_TPR-4,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR-1,pfam_TPR_2,pfam_DUF1736,pfam_TPR-4,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC2	HGNC	ENSG00000179104	292	1	0.34	188	41	17.90	-	-	-
TPP1	0	genome.wustl.edu	37	11	6638634	6638634	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	11	6638634	6638634	C	-	DEL	TPP1	ENST00000299427	human	ensembl	69_37n	-1	known	frame_shift_del	c.406	p.A136fs	1.000	pfam_Peptidase_S53_propep,superfamily_Prot_inh_propept,smart_Peptidase_S53_propep	pfam_Peptidase_S53_propep,pfam_Peptidase_S8/S53,superfamily_Peptidase_S8/S53,superfamily_Prot_inh_propept,smart_Peptidase_S53_propep	-	no_errors	TPP1	HGNC	ENSG00000166340	100	0	0.00	72	24	25.00	-	-	-
TRIM29	0	genome.wustl.edu	37	11	120008036	120008036	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	11	120008036	120008036	A	C	SNP	TRIM29	ENST00000341846	human	ensembl	69_37n	-1	known	missense	c.704	p.F235C	1.000	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	-	no_errors	TRIM29	HGNC	ENSG00000137699	64	0	0.00	44	9	16.98	-	-	-
TRIM46	0	genome.wustl.edu	37	1	155150624	155150624	+	Silent	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	155150624	155150624	G	A	SNP	TRIM46	ENST00000334634	human	ensembl	69_37n	+1	known	silent	c.1056	p.E352	1.000	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Fibronectin_type3,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462	41	0	0.00	58	19	24.68	-	-	-
TRIM46	0	genome.wustl.edu	37	1	155150625	155150625	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	155150625	155150625	C	T	SNP	TRIM46	ENST00000334634	human	ensembl	69_37n	+1	known	missense	c.1057	p.H353Y	1.000	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Fibronectin_type3,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462	41	0	0.00	57	20	25.97	-	-	-
TRPM6	0	genome.wustl.edu	37	9	77377214	77377214	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	9	77377214	77377214	G	A	SNP	TRPM6	ENST00000451710	human	ensembl	69_37n	-1	known	missense	c.4373	p.S1458L	0.999	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121	331	0	0.00	182	30	14.15	-	-	-
USP34	0	genome.wustl.edu	37	2	61492665	61492665	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	2	61492665	61492665	C	T	SNP	USP34	ENST00000398571	human	ensembl	69_37n	-1	known	nonsense	c.5645	p.W1882*	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19,superfamily_ARM-type_fold,pfscan_Peptidase_C19	-	no_errors	USP34	HGNC	ENSG00000115464	328	0	0.00	250	34	11.97	-	-	-
VPS13C	0	genome.wustl.edu	37	15	62242616	62242616	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	15	62242616	62242616	C	A	SNP	VPS13C	ENST00000261517	human	ensembl	69_37n	-1	known	missense	c.4537	p.A1513S	1.000	NULL	pfam_VPSAP,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	197	0	0.00	87	10	10.20	-	-	-
VWA3B	0	genome.wustl.edu	37	2	98928506	98928507	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	2	98928506	98928507	-	G	INS	VWA3B	ENST00000473149	human	ensembl	69_37n	+1	putative	frame_shift_ins	c.1977_1978	p.T662fs	0.000:0.004	NULL	pfscan_VWF_A	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	VWA3B	HGNC	ENSG00000168658	30	0	0.00	25	5	16.67	-	-	-
WBP11P1	0	genome.wustl.edu	37	18	30093381	30093381	+	RNA	SNP	C	C	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	18	30093381	30093381	C	A	SNP	WBP11P1	ENST00000567636	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.976	-	-	-	no_errors	WBP11P1	HGNC	ENSG00000260389	120	0	0.00	145	18	11.04	-	-	-
WWC3	0	genome.wustl.edu	37	X	10062266	10062266	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	X	10062266	10062266	C	T	SNP	WWC3	ENST00000380861	human	ensembl	69_37n	+1	known	missense	c.602	p.A201V	0.595	NULL	superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_errors	WWC3	HGNC	ENSG00000047644	129	0	0.00	89	25	21.93	-	-	-
ZNF644	0	genome.wustl.edu	37	1	91405516	91405516	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A09A-01A-11W-A019-09	TCGA-A8-A09A-10A-01W-A062-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ecfedc29-5c31-4d3d-b599-fc0a1c0beafa	c3017ca7-a84a-4cc3-9eb0-0336f130be31	1	91405516	91405516	T	A	SNP	ZNF644	ENST00000337393	human	ensembl	69_37n	-1	known	missense	c.1395	p.K465N	0.998	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482	194	0	0.00	162	53	24.65	-	-	-
