Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AMOTL2	0	genome.wustl.edu	37	3	134089691	134089692	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	3	134089691	134089692	-	G	INS	AMOTL2	ENST00000249883	human	ensembl	69_37n	-1	known	frame_shift_ins	c.585_584	p.L196fs	0.000:0.000	NULL	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL2	HGNC	ENSG00000114019	15	0	0.00	8	2	20.00	-	-	-
AP3B1	0	genome.wustl.edu	37	5	77458675	77458675	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	5	77458675	77458675	T	C	SNP	AP3B1	ENST00000255194	human	ensembl	69_37n	-1	known	missense	c.1331	p.N444S	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_bsu	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_bsu	-	no_errors	AP3B1	HGNC	ENSG00000132842	209	0	0.00	277	48	14.77	-	-	-
APEX1	0	genome.wustl.edu	37	14	20923818	20923818	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	14	20923818	20923818	G	C	SNP	APEX1	ENST00000216714	human	ensembl	69_37n	+1	known	missense	c.14	p.G5A	1.000	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,tigrfam_ExoDNase_III	-	no_errors	APEX1	HGNC	ENSG00000100823	374	0	0.00	245	103	29.60	-	-	-
ARHGEF5	0	genome.wustl.edu	37	7	144061204	144061204	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	7	144061204	144061204	A	G	SNP	ARHGEF5	ENST00000056217	human	ensembl	69_37n	+1	known	missense	c.1442	p.Q481R	0.025	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF5	HGNC	ENSG00000050327	8	0	0.00	0	3	100.00	-	-	-
BRD8	0	genome.wustl.edu	37	5	137506082	137506082	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	5	137506082	137506082	C	T	SNP	BRD8	ENST00000254900	human	ensembl	69_37n	-1	known	missense	c.457	p.E153K	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983	161	0	0.00	121	62	33.88	-	-	-
C18orf34	0	genome.wustl.edu	37	18	30554604	30554604	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	18	30554604	30554604	C	A	SNP	C18orf34	ENST00000406524	human	ensembl	69_37n	-1	known	missense	c.2502	p.E834D	0.999	NULL	NULL	-	no_errors	C18orf34	HGNC	ENSG00000166960	68	0	0.00	44	9	16.98	-	-	-
CD7	0	genome.wustl.edu	37	17	80274159	80274160	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	17	80274159	80274160	-	T	INS	CD7	ENST00000312648	human	ensembl	69_37n	-1	known	frame_shift_ins	c.524_523	p.A175fs	0.004:0.023	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	CD7	HGNC	ENSG00000173762	21	0	0.00	10	3	23.08	-	-	-
CLDN17	0	genome.wustl.edu	37	21	31538360	31538360	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	21	31538360	31538360	C	A	SNP	CLDN17	ENST00000286808	human	ensembl	69_37n	-1	known	missense	c.576	p.K192N	0.000	prints_Claudin8	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin14,prints_Claudin8	-	no_errors	CLDN17	HGNC	ENSG00000156282	447	0	0.00	236	64	21.33	-	-	-
CYP27A1	0	genome.wustl.edu	37	2	219674428	219674428	+	Silent	SNP	C	C	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	2	219674428	219674428	C	T	SNP	CYP27A1	ENST00000258415	human	ensembl	69_37n	+1	known	silent	c.384	p.N128	0.001	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP27A1	HGNC	ENSG00000135929	160	0	0.00	87	34	28.10	-	-	-
DOK5	0	genome.wustl.edu	37	20	53205225	53205225	+	Splice_Site	SNP	G	G	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	20	53205225	53205225	G	T	SNP	DOK5	ENST00000262593	human	ensembl	69_37n	+1	known	splice_site	c.290-1	e4-1	1.000	-	-	-	no_errors	DOK5	HGNC	ENSG00000101134	315	0	0.00	330	57	14.73	-	-	-
ENSG00000226232	0	genome.wustl.edu	37	16	70010517	70010519	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	16	70010517	70010519	TGT	-	DEL	ENSG00000226232	ENST00000532298	human	ensembl	69_37n	-1	novel	in_frame_del	c.761_759	p.Q253in_frame_del	0.600:0.610:0.620	pfam_NPIP	pfam_NPIP	-	no_errors	RP11-419C5.2	Clone_based_vega_gene	ENSG00000226232	13	0	0.00	4	2	33.33	-	-	-
FAM208A	0	genome.wustl.edu	37	3	56667624	56667624	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	3	56667624	56667624	T	C	SNP	FAM208A	ENST00000355628	human	ensembl	69_37n	-1	known	missense	c.3012	p.I1004M	0.996	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946	123	0	0.00	82	39	32.23	-	-	-
FKBP1B	0	genome.wustl.edu	37	2	24285915	24285915	+	Silent	SNP	C	C	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	2	24285915	24285915	C	A	SNP	FKBP1B	ENST00000380991	human	ensembl	69_37n	+1	known	silent	c.225	p.I75	0.998	NULL	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP1B	HGNC	ENSG00000119782	156	0	0.00	131	26	16.56	-	-	-
GABRG2	0	genome.wustl.edu	37	5	161576155	161576155	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	5	161576155	161576155	G	T	SNP	GABRG2	ENST00000356592	human	ensembl	69_37n	+1	known	missense	c.964	p.A322S	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg2_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG2	HGNC	ENSG00000113327	336	0	0.00	301	39	11.44	-	-	-
KALRN	0	genome.wustl.edu	37	3	124431854	124431855	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	3	124431854	124431855	-	A	INS	KALRN	ENST00000360013	human	ensembl	69_37n	+1	known	frame_shift_ins	c.8148_8149	p.M2718fs	1.000:1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_DH-domain,pfam_Prot_kinase_cat_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	128	0	0.00	138	18	11.54	-	-	-
KCNC3	0	genome.wustl.edu	37	19	50827193	50827193	+	Silent	SNP	G	G	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	19	50827193	50827193	G	A	SNP	KCNC3	ENST00000477616	human	ensembl	69_37n	-1	known	silent	c.1017	p.N339	0.216	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398	102	0	0.00	65	12	15.58	-	-	-
KRT12	0	genome.wustl.edu	37	17	39022941	39022941	+	Silent	SNP	A	A	G			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	17	39022941	39022941	A	G	SNP	KRT12	ENST00000251643	human	ensembl	69_37n	-1	known	silent	c.498	p.T166	0.002	pfam_F	pfam_F,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT12	HGNC	ENSG00000187242	67	0	0.00	48	18	26.87	-	-	-
LAMB3	0	genome.wustl.edu	37	1	209806016	209806016	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	1	209806016	209806016	C	T	SNP	LAMB3	ENST00000356082	human	ensembl	69_37n	-1	known	missense	c.734	p.R245H	0.938	smart_Laminin_N,pfscan_Laminin_N	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878	141	0	0.00	132	21	13.73	-	-	-
LRFN5	0	genome.wustl.edu	37	14	42361011	42361011	+	Silent	SNP	C	C	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	14	42361011	42361011	C	A	SNP	LRFN5	ENST00000298119	human	ensembl	69_37n	+1	known	silent	c.1944	p.G648	0.315	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	LRFN5	HGNC	ENSG00000165379	129	0	0.00	118	20	14.49	-	-	-
MAGED1	0	genome.wustl.edu	37	X	51638306	51638306	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	X	51638306	51638306	C	T	SNP	MAGED1	ENST00000375695	human	ensembl	69_37n	+1	known	missense	c.371	p.S124L	0.904	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222	52	0	0.00	16	6	27.27	-	-	-
PCDHB5	0	genome.wustl.edu	37	5	140516085	140516085	+	Nonsense_Mutation	SNP	G	G	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	5	140516085	140516085	G	T	SNP	PCDHB5	ENST00000231134	human	ensembl	69_37n	+1	known	nonsense	c.1069	p.E357*	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB5	HGNC	ENSG00000113209	120	0	0.00	129	26	16.77	-	-	-
PDCD1	0	genome.wustl.edu	37	2	242794881	242794881	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	2	242794881	242794881	C	T	SNP	PDCD1	ENST00000334409	human	ensembl	69_37n	-1	known	missense	c.328	p.V110M	0.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	PDCD1	HGNC	ENSG00000188389	40	0	0.00	8	6	42.86	-	-	-
RNF34	0	genome.wustl.edu	37	12	121855406	121855406	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	12	121855406	121855406	G	-	DEL	RNF34	ENST00000392465	human	ensembl	69_37n	+1	known	frame_shift_del	c.328	p.A110fs	0.997	superfamily_Znf_FYVE_PHD	superfamily_Znf_FYVE_PHD,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF34	HGNC	ENSG00000170633	101	0	0.00	120	56	31.82	-	-	-
RSPH6A	0	genome.wustl.edu	37	19	46307978	46307978	+	Silent	SNP	G	G	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	19	46307978	46307978	G	A	SNP	RSPH6A	ENST00000221538	human	ensembl	69_37n	-1	known	silent	c.1185	p.D395	0.998	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941	92	0	0.00	76	18	18.75	-	-	-
RUNX1	0	genome.wustl.edu	37	21	36252994	36252995	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	21	36252994	36252995	-	CC	INS	RUNX1	ENST00000300305	human	ensembl	69_37n	-1	known	frame_shift_ins	c.368_367	p.D123fs	0.999:1.000	pfam_AML1/Runt_N,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	pfam_AML1/Runt_N,pfam_RunxI,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	-	no_errors	RUNX1	HGNC	ENSG00000159216	128	0	0.00	62	32	34.04	-	-	-
SHANK1	0	genome.wustl.edu	37	19	51189556	51189556	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	19	51189556	51189556	G	A	SNP	SHANK1	ENST00000391814	human	ensembl	69_37n	-1	known	missense	c.2539	p.P847S	0.994	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	187	0	0.00	156	21	11.73	-	-	-
SLC39A13	0	genome.wustl.edu	37	11	47431811	47431812	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	11	47431811	47431812	-	G	INS	SLC39A13	ENST00000362021	human	ensembl	69_37n	+1	known	frame_shift_ins	c.166_167	p.A58fs	1.000:1.000	NULL	pfam_ZIP	-	no_errors	SLC39A13	HGNC	ENSG00000165915	84	0	0.00	27	3	10.00	-	-	-
SPOCK1	0	genome.wustl.edu	37	5	136314405	136314405	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	5	136314405	136314405	C	T	SNP	SPOCK1	ENST00000282223	human	ensembl	69_37n	-1	known	missense	c.1258	p.V420M	0.273	NULL	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal-type_dom,pfam_Prot_inh_Kazal,superfamily_Thyroglobulin_1,smart_Prot_inh_Kazal,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK1	HGNC	ENSG00000152377	353	0	0.00	435	51	10.49	-	-	-
SPTBN4	0	genome.wustl.edu	37	19	40996086	40996086	+	Silent	SNP	G	G	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	19	40996086	40996086	G	A	SNP	SPTBN4	ENST00000352632	human	ensembl	69_37n	+1	known	silent	c.426	p.S142	0.067	pirsf_Spectrin_bsu,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460	269	0	0.00	258	34	11.64	-	-	-
SUSD5	0	genome.wustl.edu	37	3	33194254	33194254	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	3	33194254	33194254	T	A	SNP	SUSD5	ENST00000309558	human	ensembl	69_37n	-1	known	missense	c.1870	p.I624F	1.000	NULL	pfam_Link,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Complement_control_module,smart_Link,pfscan_Link,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD5	HGNC	ENSG00000173705	186	0	0.00	98	56	36.36	-	-	-
TNFSF15	0	genome.wustl.edu	37	9	117553070	117553070	+	Silent	SNP	G	G	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	9	117553070	117553070	G	A	SNP	TNFSF15	ENST00000374045	human	ensembl	69_37n	-1	known	silent	c.418	p.L140	1.000	pfam_TNF,superfamily_Tumour_necrosis_fac-like,smart_TNF,pfscan_TNF	pfam_TNF,superfamily_Tumour_necrosis_fac-like,smart_TNF,pfscan_TNF,prints_TNF_a/b/c	-	no_errors	TNFSF15	HGNC	ENSG00000181634	305	0	0.00	146	24	14.12	-	-	-
TTC39B	0	genome.wustl.edu	37	9	15177715	15177715	+	Silent	SNP	A	A	G			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	9	15177715	15177715	A	G	SNP	TTC39B	ENST00000512701	human	ensembl	69_37n	-1	known	silent	c.1821	p.C607	1.000	smart_TPR_repeat	pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat	-	no_errors	TTC39B	HGNC	ENSG00000155158	162	0	0.00	114	26	18.57	-	-	-
VWA3A	0	genome.wustl.edu	37	16	22159556	22159556	+	Silent	SNP	C	C	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	16	22159556	22159556	C	T	SNP	VWA3A	ENST00000389398	human	ensembl	69_37n	+1	known	silent	c.2913	p.G971	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3A	HGNC	ENSG00000175267	214	0	0.00	154	33	17.55	-	-	-
ZC3H15	0	genome.wustl.edu	37	2	187371487	187371487	+	Silent	SNP	C	C	T			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	2	187371487	187371487	C	T	SNP	ZC3H15	ENST00000337859	human	ensembl	69_37n	+1	known	silent	c.1014	p.I338	0.993	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H15	HGNC	ENSG00000065548	86	0	0.00	43	31	41.89	-	-	-
ZFPM2	0	genome.wustl.edu	37	8	106813892	106813892	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A0A2-01A-11W-A050-09	TCGA-A8-A0A2-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b681dba3-a608-47c2-9ae8-5d761d1e800e	74e986b0-8284-4f30-8bbd-6132f40ed403	8	106813892	106813892	C	A	SNP	ZFPM2	ENST00000407775	human	ensembl	69_37n	+1	known	missense	c.1582	p.L528M	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	31	0	0.00	40	7	14.89	-	-	-
