Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACOX3	0	genome.wustl.edu	37	4	8416065	8416065	+	Missense_Mutation	SNP	T	T	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	4	8416065	8416065	T	G	SNP	ACOX3	ENST00000356406	human	ensembl	69_37n	-1	known	missense	c.497	p.N166T	1.000	pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_Oxase/DH_1,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX3	HGNC	ENSG00000087008	125	0	0.00	20	60	75.00	-	-	-
ADAM12	0	genome.wustl.edu	37	10	127760205	127760205	+	Silent	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	10	127760205	127760205	C	T	SNP	ADAM12	ENST00000368679	human	ensembl	69_37n	-1	known	silent	c.1173	p.V391	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,prints_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM12	HGNC	ENSG00000148848	91	0	0.00	87	56	39.16	-	-	-
AKAP8	0	genome.wustl.edu	37	19	15472955	15472955	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	15472955	15472955	G	C	SNP	AKAP8	ENST00000269701	human	ensembl	69_37n	-1	known	missense	c.1268	p.T423S	0.995	pfam_AKAP95	pfam_AKAP95	-	no_errors	AKAP8	HGNC	ENSG00000105127	67	0	0.00	51	40	43.96	-	-	-
ANKRD30A	0	genome.wustl.edu	37	10	37430800	37430800	+	Silent	SNP	T	T	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	10	37430800	37430800	T	A	SNP	ANKRD30A	ENST00000361713	human	ensembl	69_37n	+1	known	silent	c.807	p.P269	0.009	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513	98	0	0.00	67	34	33.66	-	-	-
ARPC1A	0	genome.wustl.edu	37	7	98946502	98946502	+	Silent	SNP	G	G	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	7	98946502	98946502	G	T	SNP	ARPC1A	ENST00000262942	human	ensembl	69_37n	+1	known	silent	c.420	p.P140	0.018	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_ARPC2/3_su1	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_ARPC2/3_su1,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ARPC1A	HGNC	ENSG00000241685	118	0	0.00	105	48	31.37	-	-	-
ATAD2B	0	genome.wustl.edu	37	2	24046432	24046432	+	Nonsense_Mutation	SNP	A	A	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	2	24046432	24046432	A	T	SNP	ATAD2B	ENST00000238789	human	ensembl	69_37n	-1	known	nonsense	c.1827	p.C609*	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778	71	0	0.00	31	27	46.55	-	-	-
AZI2	0	genome.wustl.edu	37	3	28365652	28365652	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	28365652	28365652	G	A	SNP	AZI2	ENST00000479665	human	ensembl	69_37n	-1	known	missense	c.1060	p.P354S	1.000	NULL	NULL	-	no_errors	AZI2	HGNC	ENSG00000163512	127	0	0.00	21	61	74.39	-	-	-
C10orf2	0	genome.wustl.edu	37	10	102748073	102748073	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	10	102748073	102748073	C	T	SNP	C10orf2	ENST00000311916	human	ensembl	69_37n	+1	known	missense	c.106	p.P36S	0.989	NULL	pfam_Circ_KaiC/RadA,pfam_DNA_helicase_DnaB-like_C,pfscan_DNA_helicase_DnaB-like_C	-	no_errors	C10orf2	HGNC	ENSG00000107815	27	0	0.00	16	15	48.39	-	-	-
C12orf40	0	genome.wustl.edu	37	12	40076596	40076596	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	12	40076596	40076596	C	A	SNP	C12orf40	ENST00000324616	human	ensembl	69_37n	+1	known	missense	c.870	p.N290K	0.000	NULL	NULL	-	no_errors	C12orf40	HGNC	ENSG00000180116	230	0	0.00	107	85	44.27	-	-	-
C1QTNF9B	0	genome.wustl.edu	37	13	24465799	24465799	+	Silent	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	13	24465799	24465799	G	A	SNP	C1QTNF9B	ENST00000382137	human	ensembl	69_37n	-1	known	silent	c.631	p.L211	0.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF9B	HGNC	ENSG00000205863	210	0	0.00	309	75	19.53	-	-	-
C1QTNF9B-AS1	0	genome.wustl.edu	37	13	24895535	24895535	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	13	24895535	24895535	C	T	SNP	C1QTNF9B-AS1	ENST00000422229	human	ensembl	69_37n	-1	known	missense	c.32	p.S11N	0.001	NULL	NULL	-	no_errors	AL359736.1	Clone_based_ensembl_gene	ENSG00000205850	116	0	0.00	86	56	39.44	-	-	-
C1orf172	0	genome.wustl.edu	37	1	27278442	27278443	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	27278442	27278443	-	G	INS	C1orf172	ENST00000320567	human	ensembl	69_37n	-1	known	frame_shift_ins	c.430_429	p.S143fs	0.989:0.427	NULL	NULL	-	no_errors	C1orf172	HGNC	ENSG00000175707	20	0	0.00	5	4	44.44	-	-	-
C4orf17	0	genome.wustl.edu	37	4	100443690	100443690	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	4	100443690	100443690	A	G	SNP	C4orf17	ENST00000326581	human	ensembl	69_37n	+1	known	missense	c.161	p.D54G	1.000	NULL	NULL	-	no_errors	C4orf17	HGNC	ENSG00000138813	233	0	0.00	276	80	22.47	-	-	-
CACNA1H	0	genome.wustl.edu	37	16	1265025	1265025	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	16	1265025	1265025	C	G	SNP	CACNA1H	ENST00000569107	human	ensembl	69_37n	+1	novel	missense	c.1222	p.L408V	0.225	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_PKD_2	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CACNA1H	HGNC	ENSG00000196557	35	0	0.00	27	14	34.15	-	-	-
CAPS	0	genome.wustl.edu	37	19	5914711	5914713	+	In_Frame_Del	DEL	GCG	GCG	-			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	GCG	GCG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	5914711	5914713	GCG	-	DEL	CAPS	ENST00000222125	human	ensembl	69_37n	+1	known	in_frame_del	c.221_223	p.SG74in_frame_delR	0.737:0.741:0.995	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	CAPS	HGNC	ENSG00000105519	34	0	0.00	17	19	52.78	-	-	-
CCNE1	0	genome.wustl.edu	37	19	30313495	30313495	+	Silent	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	30313495	30313495	C	T	SNP	CCNE1	ENST00000262643	human	ensembl	69_37n	+1	known	silent	c.1095	p.D365	1.000	pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNE1	HGNC	ENSG00000105173	95	0	0.00	93	73	43.98	-	-	-
CEP170	0	genome.wustl.edu	37	1	243354442	243354442	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	243354442	243354442	G	C	SNP	CEP170	ENST00000366542	human	ensembl	69_37n	-1	known	missense	c.986	p.P329R	0.934	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_Fibronectin_type3,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170	HGNC	ENSG00000143702	185	0	0.00	343	50	12.66	-	-	-
COL4A2	0	genome.wustl.edu	37	13	111155500	111155500	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	13	111155500	111155500	G	A	SNP	COL4A2	ENST00000360467	human	ensembl	69_37n	+1	known	missense	c.3910	p.A1304T	0.068	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A2	HGNC	ENSG00000134871	39	0	0.00	39	56	58.95	-	-	-
COL7A1	0	genome.wustl.edu	37	3	48608296	48608296	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	48608296	48608296	G	A	SNP	COL7A1	ENST00000328333	human	ensembl	69_37n	-1	known	missense	c.7270	p.R2424W	1.000	pfam_Collagen	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270	39	0	0.00	11	34	73.91	-	-	-
CRNKL1	0	genome.wustl.edu	37	20	20033188	20033188	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	20	20033188	20033188	C	T	SNP	CRNKL1	ENST00000496549	human	ensembl	69_37n	-1	known	missense	c.152	p.R51K	0.813	NULL	NULL	-	no_errors	CRNKL1	HGNC	ENSG00000101343	39	0	0.00	28	21	42.86	-	-	-
CROCC	0	genome.wustl.edu	37	1	17263261	17263261	+	Silent	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	17263261	17263261	G	A	SNP	CROCC	ENST00000375541	human	ensembl	69_37n	+1	known	silent	c.1086	p.L362	0.997	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453	21	0	0.00	10	9	47.37	-	-	-
DDX55	0	genome.wustl.edu	37	12	124094567	124094567	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	12	124094567	124094567	C	G	SNP	DDX55	ENST00000238146	human	ensembl	69_37n	+1	known	missense	c.633	p.N211K	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX55	HGNC	ENSG00000111364	114	0	0.00	81	62	43.36	-	-	-
DEFB112	0	genome.wustl.edu	37	6	50011348	50011348	+	Missense_Mutation	SNP	A	A	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	6	50011348	50011348	A	T	SNP	DEFB112	ENST00000322246	human	ensembl	69_37n	-1	known	missense	c.282	p.N94K	0.000	NULL	NULL	-	no_errors	DEFB112	HGNC	ENSG00000180872	102	0	0.00	66	46	41.07	-	-	-
DLGAP1	0	genome.wustl.edu	37	18	3534227	3534227	+	Missense_Mutation	SNP	T	T	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	18	3534227	3534227	T	G	SNP	DLGAP1	ENST00000315677	human	ensembl	69_37n	-1	known	missense	c.2444	p.E815A	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579	92	0	0.00	75	42	35.59	-	-	-
ENPP7	0	genome.wustl.edu	37	17	77705071	77705071	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	17	77705071	77705071	T	C	SNP	ENPP7	ENST00000328313	human	ensembl	69_37n	+1	known	missense	c.170	p.M57T	1.000	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP7	HGNC	ENSG00000182156	33	0	0.00	87	34	28.10	-	-	-
EXO1	0	genome.wustl.edu	37	1	242030258	242030258	+	Missense_Mutation	SNP	T	T	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	242030258	242030258	T	G	SNP	EXO1	ENST00000348581	human	ensembl	69_37n	+1	known	missense	c.1168	p.L390V	0.000	NULL	pfam_XPG/RAD2_endonuclease,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG/RAD2_endonuclease,smart_HhH2,prints_XPGC_Rad_DNA_repair	-	no_errors	EXO1	HGNC	ENSG00000174371	170	0	0.00	278	105	27.42	-	-	-
F5	0	genome.wustl.edu	37	1	169541502	169541502	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	169541502	169541502	C	G	SNP	F5	ENST00000367796	human	ensembl	69_37n	-1	known	missense	c.330	p.L110F	0.991	pfam_Cu-oxidase_3,superfamily_Cupredoxin	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734	101	0	0.00	146	47	24.35	-	-	-
FAM98A	0	genome.wustl.edu	37	2	33810243	33810243	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	2	33810243	33810243	C	G	SNP	FAM98A	ENST00000238823	human	ensembl	69_37n	-1	known	missense	c.1157	p.G386A	1.000	NULL	pfam_Uncharacterised_FAM98	-	no_errors	FAM98A	HGNC	ENSG00000119812	394	0	0.00	329	238	41.98	-	-	-
FCRL5	0	genome.wustl.edu	37	1	157512676	157512676	+	Missense_Mutation	SNP	T	T	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	157512676	157512676	T	A	SNP	FCRL5	ENST00000356953	human	ensembl	69_37n	-1	known	missense	c.1096	p.S366C	0.017	smart_Ig_sub,pfscan_Ig-like	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	FCRL5	HGNC	ENSG00000143297	103	0	0.00	155	48	23.65	-	-	-
GABRA4	0	genome.wustl.edu	37	4	46973128	46973128	+	Silent	SNP	T	T	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	4	46973128	46973128	T	C	SNP	GABRA4	ENST00000264318	human	ensembl	69_37n	-1	known	silent	c.846	p.K282	0.998	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABBAa4_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA4	HGNC	ENSG00000109158	168	0	0.00	57	64	52.89	-	-	-
GLIS1	0	genome.wustl.edu	37	1	54059934	54059934	+	Silent	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	54059934	54059934	C	T	SNP	GLIS1	ENST00000312233	human	ensembl	69_37n	-1	known	silent	c.642	p.R214	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS1	HGNC	ENSG00000174332	19	0	0.00	12	29	70.73	-	-	-
GNPTAB	0	genome.wustl.edu	37	12	102159023	102159023	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	12	102159023	102159023	G	C	SNP	GNPTAB	ENST00000299314	human	ensembl	69_37n	-1	known	missense	c.1672	p.P558A	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_HAND_2,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	156	0	0.00	102	78	43.33	-	-	-
GOLGA6D	0	genome.wustl.edu	37	15	75580671	75580671	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	15	75580671	75580671	G	C	SNP	GOLGA6D	ENST00000434739	human	ensembl	69_37n	+1	known	missense	c.530	p.C177S	0.999	NULL	NULL	-	no_errors	GOLGA6D	HGNC	ENSG00000140478	23	0	0.00	4	4	50.00	-	-	-
GON4L	0	genome.wustl.edu	37	1	155744795	155744795	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	155744795	155744795	G	C	SNP	GON4L	ENST00000368331	human	ensembl	69_37n	-1	known	missense	c.2348	p.T783S	0.990	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	144	0	0.00	215	79	26.87	-	-	-
GRIN2B	0	genome.wustl.edu	37	12	13768083	13768083	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	12	13768083	13768083	C	T	SNP	GRIN2B	ENST00000279593	human	ensembl	69_37n	-1	known	missense	c.1619	p.R540H	1.000	pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000150086	171	0	0.00	102	62	37.80	-	-	-
IL1RAPL2	0	genome.wustl.edu	37	X	104961445	104961445	+	Silent	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	X	104961445	104961445	G	A	SNP	IL1RAPL2	ENST00000344799	human	ensembl	69_37n	+1	known	silent	c.858	p.K286	1.000	smart_Ig_sub,pfscan_Ig-like	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like,prints_IL1_rcpt_1,prints_Interleukin-1_rcpt_II	-	no_errors	IL1RAPL2	HGNC	ENSG00000189108	560	0	0.00	276	102	26.84	-	-	-
IPO9	0	genome.wustl.edu	37	1	201798352	201798352	+	Silent	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	201798352	201798352	G	A	SNP	IPO9	ENST00000361565	human	ensembl	69_37n	+1	known	silent	c.15	p.A5	0.994	NULL	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO9	HGNC	ENSG00000198700	16	0	0.00	37	15	28.85	-	-	-
ITGB4	0	genome.wustl.edu	37	17	73738675	73738675	+	Missense_Mutation	SNP	T	T	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	17	73738675	73738675	T	A	SNP	ITGB4	ENST00000200181	human	ensembl	69_37n	+1	known	missense	c.2795	p.M932K	1.000	pirsf_Integrin_bsu-4	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,pfscan_Fibronectin_type3,prints_Integrin_bsu	-	no_errors	ITGB4	HGNC	ENSG00000132470	21	0	0.00	31	14	31.11	-	-	-
ITGB5	0	genome.wustl.edu	37	3	124567323	124567323	+	Silent	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	124567323	124567323	C	G	SNP	ITGB5	ENST00000296181	human	ensembl	69_37n	-1	known	silent	c.444	p.L148	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,smart_VWF_A,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,smart_VWF_A,prints_Integrin_bsu	-	no_errors	ITGB5	HGNC	ENSG00000082781	123	0	0.00	151	67	30.73	-	-	-
KATNB1	0	genome.wustl.edu	37	16	57775730	57775730	+	Splice_Site	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	16	57775730	57775730	G	A	SNP	KATNB1	ENST00000379661	human	ensembl	69_37n	+1	known	splice_site	c.171+1	e2+1	1.000	-	-	-	no_errors	KATNB1	HGNC	ENSG00000140854	35	0	0.00	24	23	48.94	-	-	-
KIAA0226	0	genome.wustl.edu	37	3	197427914	197427915	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	197427914	197427915	-	G	INS	KIAA0226	ENST00000296343	human	ensembl	69_37n	-1	known	frame_shift_ins	c.831_830	p.V278fs	0.000:0.000	NULL	pfam_Run,smart_Run,pfscan_Run	-	no_errors	KIAA0226	HGNC	ENSG00000145016	38	0	0.00	41	5	10.87	-	-	-
KIAA0947	0	genome.wustl.edu	37	5	5464610	5464610	+	Silent	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	5	5464610	5464610	G	A	SNP	KIAA0947	ENST00000296564	human	ensembl	69_37n	+1	known	silent	c.5163	p.P1721	0.413	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	47	0	0.00	3	18	85.71	-	-	-
KIF7	0	genome.wustl.edu	37	15	90190208	90190209	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	15	90190208	90190209	-	C	INS	KIF7	ENST00000394412	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1641_1640	p.R549fs	0.002:0.000	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF7	HGNC	ENSG00000166813	36	0	0.00	26	4	13.33	-	-	-
KLHL38	0	genome.wustl.edu	37	8	124664078	124664078	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	8	124664078	124664078	C	G	SNP	KLHL38	ENST00000325995	human	ensembl	69_37n	-1	known	missense	c.1089	p.W363C	1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL38	HGNC	ENSG00000175946	94	0	0.00	120	47	28.14	-	-	-
KRTAP10-11	0	genome.wustl.edu	37	21	46066670	46066670	+	Missense_Mutation	SNP	T	T	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	21	46066670	46066670	T	G	SNP	KRTAP10-11	ENST00000334670	human	ensembl	69_37n	+1	known	missense	c.295	p.C99G	0.874	NULL	NULL	-	no_errors	KRTAP10-11	HGNC	ENSG00000243489	150	0	0.00	120	77	39.09	-	-	-
LCA5L	0	genome.wustl.edu	37	21	40794925	40794925	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	21	40794925	40794925	C	A	SNP	LCA5L	ENST00000288350	human	ensembl	69_37n	-1	known	missense	c.814	p.D272Y	1.000	NULL	NULL	-	no_errors	LCA5L	HGNC	ENSG00000157578	114	0	0.00	61	56	47.86	-	-	-
LRBA	0	genome.wustl.edu	37	4	151223890	151223890	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	4	151223890	151223890	C	T	SNP	LRBA	ENST00000357115	human	ensembl	69_37n	-1	known	missense	c.7937	p.R2646H	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589	107	0	0.00	84	64	43.24	-	-	-
LSM14B	0	genome.wustl.edu	37	20	60708435	60708435	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	20	60708435	60708435	G	C	SNP	LSM14B	ENST00000253001	human	ensembl	69_37n	+1	known	missense	c.1076	p.R359P	0.944	NULL	pfam_FDF_dom,superfamily_LSM_dom	-	no_errors	LSM14B	HGNC	ENSG00000149657	108	0	0.00	15	166	91.21	-	-	-
MAPK4	0	genome.wustl.edu	37	18	48255592	48255592	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	18	48255592	48255592	G	T	SNP	MAPK4	ENST00000400384	human	ensembl	69_37n	+1	known	missense	c.1132	p.V378L	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_MAPK_ERK3/4	-	no_errors	MAPK4	HGNC	ENSG00000141639	10	0	0.00	4	6	60.00	-	-	-
MBD5	0	genome.wustl.edu	37	2	149247300	149247300	+	Silent	SNP	T	T	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	2	149247300	149247300	T	C	SNP	MBD5	ENST00000407073	human	ensembl	69_37n	+1	known	silent	c.3400	p.L1134	0.077	NULL	superfamily_DNA-bd_integrase-typ,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_PWWP	-	no_errors	MBD5	HGNC	ENSG00000204406	118	0	0.00	89	57	39.04	-	-	-
MFI2	0	genome.wustl.edu	37	3	196748288	196748288	+	Silent	SNP	C	C	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	196748288	196748288	C	A	SNP	MFI2	ENST00000296350	human	ensembl	69_37n	-1	known	silent	c.699	p.L233	1.000	pfam_Peptidase_S60,smart_Peptidase_S60,pirsf_Transferrin	pfam_Peptidase_S60,smart_Peptidase_S60,pirsf_Transferrin,prints_Peptidase_S60	-	no_errors	MFI2	HGNC	ENSG00000163975	37	0	0.00	36	16	30.77	-	-	-
MIR634	0	genome.wustl.edu	37	17	64783222	64783222	+	RNA	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	17	64783222	64783222	G	C	SNP	MIR634	ENST00000385208	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	MIR634	HGNC	ENSG00000207943	90	0	0.00	150	61	28.91	-	-	-
MUC16	0	genome.wustl.edu	37	19	9065209	9065209	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	9065209	9065209	C	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.22237	p.A7413T	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	236	0	0.00	179	103	36.52	-	-	-
MYNN	0	genome.wustl.edu	37	3	169500356	169500356	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	169500356	169500356	C	T	SNP	MYNN	ENST00000349841	human	ensembl	69_37n	+1	known	missense	c.1324	p.P442S	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	MYNN	HGNC	ENSG00000085274	148	0	0.00	136	222	62.01	-	-	-
NAMPTL	0	genome.wustl.edu	37	10	36812168	36812168	+	Missense_Mutation	SNP	A	A	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	10	36812168	36812168	A	T	SNP	NAMPTL	ENST00000440465	human	ensembl	69_37n	-1	known	missense	c.995	p.I332N	1.000	pfam_Nic_PRibTrfase-like,superfamily_Quinolinate_PRibosylTrfase_C,pirsf_Nicotinamide_PRibTrfase	pfam_Nic_PRibTrfase-like,superfamily_Quinolinate_PRibosylTrfase_C,pirsf_Nicotinamide_PRibTrfase	-	no_start_codon	NAMPTL	HGNC	ENSG00000229644	201	0	0.00	133	109	45.04	-	-	-
NOS1AP	0	genome.wustl.edu	37	1	162326813	162326813	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	162326813	162326813	T	C	SNP	NOS1AP	ENST00000361897	human	ensembl	69_37n	+1	known	missense	c.826	p.S276P	0.004	NULL	pfam_PTyr_interaction_dom,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom	-	no_errors	NOS1AP	HGNC	ENSG00000198929	35	0	0.00	62	21	25.30	-	-	-
NUSAP1	0	genome.wustl.edu	37	15	41650380	41650380	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	15	41650380	41650380	A	G	SNP	NUSAP1	ENST00000559596	human	ensembl	69_37n	+1	known	missense	c.584	p.E195G	1.000	NULL	NULL	-	no_errors	NUSAP1	HGNC	ENSG00000137804	24	0	0.00	13	4	23.53	-	-	-
OR10S1	0	genome.wustl.edu	37	11	123847945	123847945	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	11	123847945	123847945	T	A	SNP	OR10S1	ENST00000531945	human	ensembl	69_37n	-1	known	nonsense	c.454	p.R152*	0.001	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10S1	HGNC	ENSG00000196248	124	0	0.00	126	40	23.95	-	-	-
OR10V1	0	genome.wustl.edu	37	11	59480439	59480439	+	Missense_Mutation	SNP	T	T	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	11	59480439	59480439	T	A	SNP	OR10V1	ENST00000307552	human	ensembl	69_37n	-1	known	missense	c.880	p.R294W	1.000	prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR10V1	HGNC	ENSG00000172289	154	0	0.00	131	97	42.54	-	-	-
PCDHB2	0	genome.wustl.edu	37	5	140474886	140474886	+	Missense_Mutation	SNP	A	A	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	5	140474886	140474886	A	T	SNP	PCDHB2	ENST00000194155	human	ensembl	69_37n	+1	known	missense	c.512	p.N171I	0.049	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB2	HGNC	ENSG00000112852	42	0	0.00	22	28	54.90	-	-	-
PDE3A	0	genome.wustl.edu	37	12	20522722	20522723	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	12	20522722	20522723	-	G	INS	PDE3A	ENST00000359062	human	ensembl	69_37n	+1	known	frame_shift_ins	c.504_505	p.E170fs	1.000:1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3A	HGNC	ENSG00000172572	11	0	0.00	10	3	23.08	-	-	-
PHACTR4	0	genome.wustl.edu	37	1	28800394	28800394	+	Missense_Mutation	SNP	T	T	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	28800394	28800394	T	G	SNP	PHACTR4	ENST00000373836	human	ensembl	69_37n	+1	known	missense	c.1182	p.I394M	0.077	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR4	HGNC	ENSG00000204138	118	0	0.00	238	84	26.09	-	-	-
PHC3	0	genome.wustl.edu	37	3	169854406	169854406	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	169854406	169854406	G	C	SNP	PHC3	ENST00000495893	human	ensembl	69_37n	-1	known	missense	c.720	p.S240R	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC3	HGNC	ENSG00000173889	355	0	0.00	401	128	24.20	-	-	-
PRAMEF22	0	genome.wustl.edu	37	1	13036693	13036693	+	Silent	SNP	A	A	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	13036693	13036693	A	G	SNP	PRAMEF22	ENST00000376187	human	ensembl	69_37n	+1	known	silent	c.765	p.E255	0.007	NULL	NULL	-	no_errors	PRAMEF22	HGNC	ENSG00000204508	39	0	0.00	43	33	43.42	-	-	-
PRDM4	0	genome.wustl.edu	37	12	108134960	108134960	+	Silent	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	12	108134960	108134960	G	A	SNP	PRDM4	ENST00000228437	human	ensembl	69_37n	-1	known	silent	c.1687	p.L563	1.000	smart_Znf_C2H2-like,pirsf_Znf_PRDM4	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_Znf_PRDM4,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM4	HGNC	ENSG00000110851	171	0	0.00	117	85	42.08	-	-	-
RORC	0	genome.wustl.edu	37	1	151787698	151787698	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	151787698	151787698	C	T	SNP	RORC	ENST00000392697	human	ensembl	69_37n	-1	known	missense	c.664	p.E222K	0.995	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ROR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt	-	no_errors	RORC	HGNC	ENSG00000143365	33	0	0.00	36	12	24.49	-	-	-
RRP12	0	genome.wustl.edu	37	10	99126551	99126551	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	10	99126551	99126551	C	G	SNP	RRP12	ENST00000370992	human	ensembl	69_37n	-1	known	missense	c.3163	p.E1055Q	1.000	NULL	pfam_Uncharacterised_NUC173,superfamily_ARM-type_fold	-	no_errors	RRP12	HGNC	ENSG00000052749	48	0	0.00	49	43	46.74	-	-	-
RUSC1	0	genome.wustl.edu	37	1	155298046	155298046	+	Silent	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	155298046	155298046	C	G	SNP	RUSC1	ENST00000368352	human	ensembl	69_37n	+1	known	silent	c.2520	p.P840	0.579	superfamily_SH3_domain	pfam_Run,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC1	HGNC	ENSG00000160753	34	0	0.00	50	16	24.24	-	-	-
SBSN	0	genome.wustl.edu	37	19	36018958	36018958	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	36018958	36018958	C	T	SNP	SBSN	ENST00000518157	human	ensembl	69_37n	-1	known	missense	c.226	p.G76R	0.045	NULL	NULL	-	no_errors	SBSN	HGNC	ENSG00000189001	54	0	0.00	58	40	40.82	-	-	-
SH3PXD2A	0	genome.wustl.edu	37	10	105484097	105484098	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	10	105484097	105484098	-	G	INS	SH3PXD2A	ENST00000369774	human	ensembl	69_37n	-1	known	frame_shift_ins	c.329_328	p.H110fs	1.000:0.989	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2A	HGNC	ENSG00000107957	35	0	0.00	25	5	16.67	-	-	-
SI	0	genome.wustl.edu	37	3	164737418	164737418	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	164737418	164737418	C	-	DEL	SI	ENST00000264382	human	ensembl	69_37n	-1	known	frame_shift_del	c.3395	p.G1132fs	1.000	superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402	201	0	0.00	242	112	31.37	-	-	-
SLC16A12	0	genome.wustl.edu	37	10	91198842	91198842	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	10	91198842	91198842	T	C	SNP	SLC16A12	ENST00000371790	human	ensembl	69_37n	-1	known	missense	c.547	p.S183G	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A12	HGNC	ENSG00000152779	54	0	0.00	70	38	35.19	-	-	-
SLC26A9	0	genome.wustl.edu	37	1	205898368	205898368	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	205898368	205898368	G	T	SNP	SLC26A9	ENST00000340781	human	ensembl	69_37n	-1	known	missense	c.834	p.H278Q	1.000	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A9	HGNC	ENSG00000174502	189	0	0.00	394	91	18.76	-	-	-
SLC30A8	0	genome.wustl.edu	37	8	118169971	118169971	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	8	118169971	118169971	G	T	SNP	SLC30A8	ENST00000456015	human	ensembl	69_37n	+1	known	missense	c.460	p.V154L	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A8	HGNC	ENSG00000164756	268	0	0.00	711	147	17.13	-	-	-
SLC35C2	0	genome.wustl.edu	37	20	44983581	44983582	+	In_Frame_Ins	INS	-	-	GCA			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	20	44983581	44983582	-	GCA	INS	SLC35C2	ENST00000543605	human	ensembl	69_37n	-1	known	in_frame_ins	c.688_687	p.229in_frame_insC	1.000:1.000	pfam_DUF250,pfam_UAA	pfam_DUF250,pfam_UAA	-	no_errors	SLC35C2	HGNC	ENSG00000080189	88	0	0.00	112	40	26.32	-	-	-
SNCAIP	0	genome.wustl.edu	37	5	121780331	121780331	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	5	121780331	121780331	G	T	SNP	SNCAIP	ENST00000379533	human	ensembl	69_37n	+1	known	missense	c.1637	p.R546L	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692	99	0	0.00	117	27	18.75	-	-	-
SPATS1	0	genome.wustl.edu	37	6	44320474	44320474	+	Missense_Mutation	SNP	A	A	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	6	44320474	44320474	A	C	SNP	SPATS1	ENST00000288390	human	ensembl	69_37n	+1	known	missense	c.151	p.S51R	0.000	NULL	NULL	-	no_errors	SPATS1	HGNC	ENSG00000249481	193	0	0.00	124	106	45.89	-	-	-
SUGP1	0	genome.wustl.edu	37	19	19414553	19414553	+	Nonsense_Mutation	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	19414553	19414553	G	C	SNP	SUGP1	ENST00000247001	human	ensembl	69_37n	-1	known	nonsense	c.642	p.Y214*	1.000	pfam_Surp,superfamily_Surp,smart_Surp,pfscan_Surp	pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	SUGP1	HGNC	ENSG00000105705	91	0	0.00	62	49	44.14	-	-	-
SUGP1	0	genome.wustl.edu	37	19	19414555	19414555	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	19414555	19414555	A	-	DEL	SUGP1	ENST00000247001	human	ensembl	69_37n	-1	known	frame_shift_del	c.640	p.Y214fs	1.000	pfam_Surp,superfamily_Surp,smart_Surp,pfscan_Surp	pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	SUGP1	HGNC	ENSG00000105705	92	0	0.00	60	47	43.12	-	-	-
TCEAL5	0	genome.wustl.edu	37	X	102528976	102528976	+	Missense_Mutation	SNP	T	T	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	X	102528976	102528976	T	A	SNP	TCEAL5	ENST00000372680	human	ensembl	69_37n	-1	known	missense	c.516	p.Q172H	0.901	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL5	HGNC	ENSG00000204065	1348	0	0.00	1047	711	40.37	-	-	-
TCN2	0	genome.wustl.edu	37	22	31019054	31019054	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	22	31019054	31019054	C	A	SNP	TCN2	ENST00000215838	human	ensembl	69_37n	+1	known	missense	c.1206	p.N402K	0.960	NULL	pfam_Cbl-bd_transpt_euk,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	TCN2	HGNC	ENSG00000185339	29	0	0.00	30	29	48.33	-	-	-
TDRD5	0	genome.wustl.edu	37	1	179659890	179659890	+	Silent	SNP	T	T	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	179659890	179659890	T	C	SNP	TDRD5	ENST00000444136	human	ensembl	69_37n	+1	known	silent	c.2920	p.L974	0.006	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD5	HGNC	ENSG00000162782	98	0	0.00	141	45	24.19	-	-	-
TMEM131	0	genome.wustl.edu	37	2	98428967	98428967	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	2	98428967	98428967	C	G	SNP	TMEM131	ENST00000186436	human	ensembl	69_37n	-1	known	missense	c.1780	p.V594L	0.996	NULL	pfam_DUF3651_TMEM131	-	no_errors	TMEM131	HGNC	ENSG00000075568	129	0	0.00	77	57	42.54	-	-	-
TNXB	0	genome.wustl.edu	37	6	32011575	32011575	+	Silent	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	6	32011575	32011575	C	T	SNP	TNXB	ENST00000375247	human	ensembl	69_37n	-1	known	silent	c.11475	p.S3825	0.003	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C,superfamily_Fibronectin_type3,smart_EGF-like,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	12	0	0.00	6	14	70.00	-	-	-
TTC39A	0	genome.wustl.edu	37	1	51767912	51767913	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	51767912	51767913	-	C	INS	TTC39A	ENST00000262676	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1104_1103	p.Q369fs	0.000:0.000	NULL	pfam_OMP_IML2_mit/TPR_39	-	no_errors	TTC39A	HGNC	ENSG00000085831	9	0	0.00	4	2	33.33	-	-	-
TTN	0	genome.wustl.edu	37	2	179576811	179576811	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	2	179576811	179576811	G	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.24014	p.T8005M	0.038	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	43	0	0.00	22	8	26.67	-	-	-
TTN	0	genome.wustl.edu	37	2	179588692	179588692	+	Silent	SNP	G	G	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	2	179588692	179588692	G	C	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	silent	c.17562	p.V5854	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	86	0	0.00	42	23	35.38	-	-	-
UBA1	0	genome.wustl.edu	37	X	47070446	47070446	+	Silent	SNP	G	G	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	X	47070446	47070446	G	A	SNP	UBA1	ENST00000335972	human	ensembl	69_37n	+1	known	silent	c.2286	p.L762	1.000	pfam_UBact_repeat,superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA1	HGNC	ENSG00000130985	148	0	0.00	84	75	47.17	-	-	-
UCK2	0	genome.wustl.edu	37	1	165865513	165865513	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	165865513	165865513	T	C	SNP	UCK2	ENST00000367879	human	ensembl	69_37n	+1	known	missense	c.443	p.L148P	1.000	pfam_PRK/URK,pfam_Depp_CoAkinase,prints_PRK,tigrfam_Uridine_kinase	pfam_PRK/URK,pfam_Depp_CoAkinase,prints_Uridine_kinase,prints_PRK,tigrfam_Uridine_kinase	-	no_errors	UCK2	HGNC	ENSG00000143179	91	0	0.00	178	59	24.89	-	-	-
UHRF1BP1	0	genome.wustl.edu	37	6	34827338	34827338	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	6	34827338	34827338	C	T	SNP	UHRF1BP1	ENST00000192788	human	ensembl	69_37n	+1	known	missense	c.3205	p.P1069S	0.968	NULL	NULL	-	no_errors	UHRF1BP1	HGNC	ENSG00000065060	104	0	0.00	58	44	43.14	-	-	-
USH2A	0	genome.wustl.edu	37	1	216221986	216221986	+	Missense_Mutation	SNP	A	A	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	1	216221986	216221986	A	T	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.6053	p.I2018K	0.930	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	356	0	0.00	407	176	30.14	-	-	-
USPL1	0	genome.wustl.edu	37	13	31221139	31221139	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	13	31221139	31221139	G	T	SNP	USPL1	ENST00000255304	human	ensembl	69_37n	+1	known	missense	c.1183	p.G395C	1.000	pfscan_Peptidase_C19	pfscan_Peptidase_C19	-	no_errors	USPL1	HGNC	ENSG00000132952	382	0	0.00	212	185	46.60	-	-	-
VAMP7	0	genome.wustl.edu	37	X	155169387	155169387	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	X	155169387	155169387	G	T	SNP	VAMP7	ENST00000262640	human	ensembl	69_37n	+1	known	missense	c.456	p.Q152H	1.000	NULL	superfamily_Longin-like_dom,pfscan_Longin_dom	-	no_errors	VAMP7	HGNC	ENSG00000124333	1724	2	0.12	1829	764	29.45	-	-	-
VN1R2	0	genome.wustl.edu	37	19	53762388	53762388	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	53762388	53762388	A	G	SNP	VN1R2	ENST00000341702	human	ensembl	69_37n	+1	known	missense	c.760	p.S254G	0.000	pfam_Vmron_rcpt_1,pfam_7TM_GPCR_Rhodpsn,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_Vmron_rcpt_1,pfam_7TM_GPCR_Rhodpsn,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_supfam,prints_Vmron_rcpt_1	-	no_errors	VN1R2	HGNC	ENSG00000196131	65	0	0.00	75	11	12.79	-	-	-
VNN2	0	genome.wustl.edu	37	6	133077134	133077134	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	6	133077134	133077134	C	G	SNP	VNN2	ENST00000326499	human	ensembl	69_37n	-1	known	missense	c.385	p.A129P	0.994	pirsf_Biotinidase_euk,pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pfscan_C-N_Hydrolase	pirsf_Biotinidase_euk,pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pfscan_C-N_Hydrolase	-	no_errors	VNN2	HGNC	ENSG00000112303	249	0	0.00	251	107	29.89	-	-	-
WDR52	0	genome.wustl.edu	37	3	113146069	113146069	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	3	113146069	113146069	C	A	SNP	WDR52	ENST00000393845	human	ensembl	69_37n	-1	known	missense	c.218	p.S73I	0.574	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530	251	0	0.00	300	95	24.05	-	-	-
ZFP91	0	genome.wustl.edu	37	11	58384774	58384775	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	11	58384774	58384775	-	A	INS	ZFP91	ENST00000316059	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1308_1309	p.F438fs	1.000:1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP91	HGNC	ENSG00000186660	78	0	0.00	35	24	40.68	-	-	-
ZNF841	0	genome.wustl.edu	37	19	52568485	52568485	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9407735f-19e3-49d0-b783-cd9672dfa6a9	f491c9e0-384e-4dc9-973f-d4513f9acef9	19	52568485	52568485	T	A	SNP	ZNF841	ENST00000389534	human	ensembl	69_37n	-1	known	nonsense	c.2650	p.K884*	0.753	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF841	HGNC	ENSG00000197608	249	0	0.00	168	138	45.10	-	-	-
