Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS3	0	genome.wustl.edu	37	4	73149357	73149357	+	Silent	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	4	73149357	73149357	G	A	SNP	ADAMTS3	ENST00000286657	human	ensembl	69_37n	-1	known	silent	c.3114	p.S1038	1.000	pfscan_PLAC	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS3	HGNC	ENSG00000156140	139	0	0.00	86	73	45.91	-	-	-
ARMCX5	0	genome.wustl.edu	37	X	101858403	101858403	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	X	101858403	101858403	G	T	SNP	ARMCX5	ENST00000246174	human	ensembl	69_37n	+1	known	missense	c.1334	p.S445I	0.146	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	ARMCX5	HGNC	ENSG00000125962	104	0	0.00	98	42	30.00	-	-	-
ASIC3	0	genome.wustl.edu	37	7	150746364	150746364	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	7	150746364	150746364	G	A	SNP	ASIC3	ENST00000297512	human	ensembl	69_37n	+1	known	missense	c.392	p.R131Q	0.954	pfam_Na+channel_ASC,tigrfam_EnaC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	ASIC3	HGNC	ENSG00000213199	43	0	0.00	4	16	80.00	-	-	-
C1QTNF5	0	genome.wustl.edu	37	11	119216272	119216273	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	11	119216272	119216273	-	G	INS	C1QTNF5	ENST00000449574	human	ensembl	69_37n	-1	known	frame_shift_ins	c.499_498	p.N166fs	0.997:1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Frizzled_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB,smart_LDrepeatLR_classA_rpt,smart_Frizzled_dom,pfscan_CUB,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt	-	no_errors	MFRP	Clone_based_vega_gene	ENSG00000235718	108	0	0.00	31	6	16.22	-	-	-
C1QTNF9B	0	genome.wustl.edu	37	13	24465804	24465804	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	13	24465804	24465804	G	A	SNP	C1QTNF9B	ENST00000382137	human	ensembl	69_37n	-1	known	missense	c.626	p.T209M	0.982	pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF9B	HGNC	ENSG00000205863	191	0	0.00	324	50	13.37	-	-	-
C5orf25	0	genome.wustl.edu	37	5	175717341	175717341	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	5	175717341	175717341	C	T	SNP	C5orf25	ENST00000443967	human	ensembl	69_37n	+1	known	missense	c.757	p.R253W	0.004	NULL	NULL	-	no_errors	C5orf25	HGNC	ENSG00000170085	404	0	0.00	130	116	46.59	-	-	-
CDC42EP1	0	genome.wustl.edu	37	22	37962638	37962639	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	22	37962638	37962639	-	C	INS	CDC42EP1	ENST00000249014	human	ensembl	69_37n	+1	known	frame_shift_ins	c.282_283	p.R96fs	0.000:0.001	NULL	pfam_PAK_box_Rho-bd,smart_PAK_box_Rho-bd,pfscan_PAK_box_Rho-bd	-	no_errors	CDC42EP1	HGNC	ENSG00000128283	53	0	0.00	20	4	16.67	-	-	-
CEP250	0	genome.wustl.edu	37	20	34092646	34092646	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	20	34092646	34092646	G	A	SNP	CEP250	ENST00000397527	human	ensembl	69_37n	+1	known	missense	c.6449	p.R2150Q	0.036	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001	90	0	0.00	61	55	47.41	-	-	-
CNGA4	0	genome.wustl.edu	37	11	6261469	6261469	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	11	6261469	6261469	C	T	SNP	CNGA4	ENST00000379936	human	ensembl	69_37n	+1	known	missense	c.445	p.R149C	1.000	pfam_Ion_trans_dom	pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA4	HGNC	ENSG00000132259	18	0	0.00	69	36	34.29	-	-	-
COL9A1	0	genome.wustl.edu	37	6	70942387	70942387	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	6	70942387	70942387	G	A	SNP	COL9A1	ENST00000357250	human	ensembl	69_37n	-1	known	missense	c.2402	p.P801L	0.997	pfam_Collagen	pfam_Collagen,superfamily_ConA-like_lec_gl,smart_Laminin_G	-	no_errors	COL9A1	HGNC	ENSG00000112280	124	0	0.00	58	18	23.68	-	-	-
CR1	0	genome.wustl.edu	37	1	207726127	207726127	+	Missense_Mutation	SNP	T	T	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	1	207726127	207726127	T	G	SNP	CR1	ENST00000367049	human	ensembl	69_37n	+1	known	missense	c.3032	p.V1011G	0.003	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710	182	0	0.00	106	17	13.71	-	-	-
CRNKL1	0	genome.wustl.edu	37	20	20033036	20033036	+	Missense_Mutation	SNP	A	A	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	20	20033036	20033036	A	C	SNP	CRNKL1	ENST00000377340	human	ensembl	69_37n	-1	known	missense	c.434	p.F145C	0.000	NULL	pfam_HAT,pfam_Suf,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	CRNKL1	HGNC	ENSG00000101343	86	0	0.00	58	29	33.33	-	-	-
DTNB	0	genome.wustl.edu	37	2	25611152	25611152	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	25611152	25611152	A	G	SNP	DTNB	ENST00000406818	human	ensembl	69_37n	-1	known	missense	c.1654	p.S552P	0.992	pirsf_Distrobrevin	pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_Znf_ZZ,smart_Znf_ZZ,pirsf_Distrobrevin,pfscan_Znf_ZZ	-	no_errors	DTNB	HGNC	ENSG00000138101	63	0	0.00	50	13	20.63	-	-	-
DYSF	0	genome.wustl.edu	37	2	71839796	71839797	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	71839796	71839797	-	C	INS	DYSF	ENST00000413539	human	ensembl	69_37n	+1	known	frame_shift_ins	c.4286_4287	p.I1432fs	1.000:0.989	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_MFS_dom_general_subst_transpt,smart_C2_Ca-dep,smart_Peroxin/Ferlin,pfscan_C2_membr_targeting	-	no_errors	DYSF	HGNC	ENSG00000135636	69	0	0.00	41	5	10.87	-	-	-
ELMO1	0	genome.wustl.edu	37	7	37253022	37253022	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	7	37253022	37253022	G	A	SNP	ELMO1	ENST00000310758	human	ensembl	69_37n	-1	known	missense	c.872	p.A291V	1.000	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849	209	0	0.00	243	57	18.94	-	-	-
FAM59A	0	genome.wustl.edu	37	18	29848211	29848211	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	18	29848211	29848211	C	T	SNP	FAM59A	ENST00000269209	human	ensembl	69_37n	-1	known	missense	c.2254	p.E752K	1.000	NULL	superfamily_SAM/pointed	-	no_errors	FAM59A	HGNC	ENSG00000141441	96	0	0.00	119	19	13.77	-	-	-
GAD1	0	genome.wustl.edu	37	2	171685996	171685996	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	171685996	171685996	A	G	SNP	GAD1	ENST00000358196	human	ensembl	69_37n	+1	known	missense	c.157	p.R53G	1.000	NULL	pfam_PyrdxlP-dep_de-COase,pfam_Aminotrans_V/Cys_dSase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	GAD1	HGNC	ENSG00000128683	31	0	0.00	20	12	37.50	-	-	-
GIPC3	0	genome.wustl.edu	37	19	3589526	3589527	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	19	3589526	3589527	-	G	INS	GIPC3	ENST00000322315	human	ensembl	69_37n	+1	known	frame_shift_ins	c.678_679	p.A228fs	0.411:0.803	pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC3	HGNC	ENSG00000179855	82	0	0.00	36	4	10.00	-	-	-
GLYR1	0	genome.wustl.edu	37	16	4862228	4862229	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	16	4862228	4862229	-	C	INS	GLYR1	ENST00000321919	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1141_1140	p.R380fs	0.990:0.170	pfam_6PGDH_NADP-bd	pfam_6PGDH_NADP-bd,pfam_PWWP,pfam_NADP_OxRdtase_F420,superfamily_6-PGluconate_DH_C-like,smart_PWWP,pfscan_PWWP	-	no_errors	GLYR1	HGNC	ENSG00000140632	73	0	0.00	129	16	11.03	-	-	-
GPC6	0	genome.wustl.edu	37	13	94482640	94482640	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	13	94482640	94482640	G	A	SNP	GPC6	ENST00000377047	human	ensembl	69_37n	+1	known	missense	c.553	p.D185N	1.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC6	HGNC	ENSG00000183098	181	0	0.00	135	61	31.12	-	-	-
GPR162	0	genome.wustl.edu	37	12	6933549	6933549	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	12	6933549	6933549	G	A	SNP	GPR162	ENST00000311268	human	ensembl	69_37n	+1	known	missense	c.485	p.R162H	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_GPCR_162,prints_GPCR_153/162	-	no_errors	GPR162	HGNC	ENSG00000250510	36	0	0.00	25	8	23.53	-	-	-
GSK3B	0	genome.wustl.edu	37	3	119585461	119585461	+	Silent	SNP	T	T	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	3	119585461	119585461	T	G	SNP	GSK3B	ENST00000316626	human	ensembl	69_37n	-1	known	silent	c.924	p.T308	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	GSK3B	HGNC	ENSG00000082701	207	0	0.00	199	66	24.81	-	-	-
HEPH	0	genome.wustl.edu	37	X	65475997	65475997	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	X	65475997	65475997	C	G	SNP	HEPH	ENST00000519389	human	ensembl	69_37n	+1	known	missense	c.2883	p.I961M	0.065	superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPH	HGNC	ENSG00000089472	499	0	0.00	318	121	27.56	-	-	-
KIAA0100	0	genome.wustl.edu	37	17	26961724	26961724	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	17	26961724	26961724	G	C	SNP	KIAA0100	ENST00000005905	human	ensembl	69_37n	-1	known	missense	c.2881	p.R961G	1.000	NULL	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202	142	0	0.00	207	33	13.75	-	-	-
LCT	0	genome.wustl.edu	37	2	136567537	136567537	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	136567537	136567537	G	A	SNP	LCT	ENST00000264162	human	ensembl	69_37n	-1	known	missense	c.2380	p.R794C	0.985	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	81	0	0.00	42	19	31.15	-	-	-
LOXL3	0	genome.wustl.edu	37	2	74763923	74763924	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	74763923	74763924	-	C	INS	LOXL3	ENST00000264094	human	ensembl	69_37n	-1	known	frame_shift_ins	c.825_824	p.A277fs	0.118:0.001	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt	pfam_Lysyl_oxidase,pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_Lysyl_oxidase,prints_Srcr_rcpt,pfscan_Srcr_rcpt	-	no_errors	LOXL3	HGNC	ENSG00000115318	108	0	0.00	98	12	10.91	-	-	-
MAPRE3	0	genome.wustl.edu	37	2	27248516	27248517	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	27248516	27248517	-	C	INS	MAPRE3	ENST00000233121	human	ensembl	69_37n	+1	known	frame_shift_ins	c.535_536	p.C182fs	0.999:1.000	NULL	pfam_EB1_C,pfam_CH-domain,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	MAPRE3	HGNC	ENSG00000084764	94	0	0.00	107	22	17.05	-	-	-
MUC7	0	genome.wustl.edu	37	4	71346600	71346600	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	4	71346600	71346600	C	T	SNP	MUC7	ENST00000304887	human	ensembl	69_37n	+1	known	missense	c.139	p.H47Y	0.000	NULL	NULL	-	no_errors	MUC7	HGNC	ENSG00000171195	376	0	0.00	513	92	15.21	-	-	-
NBAS	0	genome.wustl.edu	37	2	15374721	15374721	+	Missense_Mutation	SNP	A	A	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	15374721	15374721	A	T	SNP	NBAS	ENST00000281513	human	ensembl	69_37n	-1	known	missense	c.6094	p.S2032T	0.680	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	106	0	0.00	60	22	26.83	-	-	-
NEUROD1	0	genome.wustl.edu	37	2	182542971	182542972	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	182542971	182542972	-	G	INS	NEUROD1	ENST00000295108	human	ensembl	69_37n	-1	known	frame_shift_ins	c.617_616	p.H206fs	0.999:0.996	pfam_Neurogenic_DUF,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pirsf_TF_bHLH_NeuroD,pfscan_HLH_DNA-bd	-	no_errors	NEUROD1	HGNC	ENSG00000162992	79	0	0.00	131	17	11.49	-	-	-
NFRKB	0	genome.wustl.edu	37	11	129754709	129754709	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	11	129754709	129754709	G	A	SNP	NFRKB	ENST00000524794	human	ensembl	69_37n	-1	known	missense	c.748	p.R250C	0.920	NULL	NULL	-	no_errors	NFRKB	HGNC	ENSG00000170322	165	0	0.00	133	26	16.35	-	-	-
NOS1	0	genome.wustl.edu	37	12	117723955	117723955	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	12	117723955	117723955	C	T	SNP	NOS1	ENST00000317775	human	ensembl	69_37n	-1	known	missense	c.1244	p.R415Q	1.000	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_met	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_met,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250	544	0	0.00	141	54	27.69	-	-	-
NRXN1	0	genome.wustl.edu	37	2	50464028	50464028	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	50464028	50464028	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	69_37n	-1	known	missense	c.3421	p.A1141T	1.000	superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	238	0	0.00	150	52	25.74	-	-	-
OR13C8	0	genome.wustl.edu	37	9	107331659	107331659	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	9	107331659	107331659	G	A	SNP	OR13C8	ENST00000335040	human	ensembl	69_37n	+1	known	missense	c.211	p.V71I	0.999	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR13C8	HGNC	ENSG00000186943	930	1	0.11	174	216	55.38	-	-	-
PCED1B	0	genome.wustl.edu	37	12	47630075	47630075	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	12	47630075	47630075	C	T	SNP	PCED1B	ENST00000432328	human	ensembl	69_37n	+1	known	missense	c.1229	p.T410M	0.000	NULL	superfamily_Esterase_SGNH_hydro-type	-	no_errors	PCED1B	HGNC	ENSG00000179715	72	0	0.00	34	35	50.72	-	-	-
PLCG1	0	genome.wustl.edu	37	20	39802848	39802848	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	20	39802848	39802848	C	T	SNP	PLCG1	ENST00000244007	human	ensembl	69_37n	+1	known	nonsense	c.3730	p.R1244*	0.999	pirsf_PLC-gamma	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_Pleckstrin_homology,pfam_C2_Ca-dep,pfam_SH3_domain,pfam_SH3_2,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,pirsf_PLC-gamma,pfscan_EF_HAND_2,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2	-	no_errors	PLCG1	HGNC	ENSG00000124181	70	0	0.00	50	17	25.37	-	-	-
PLD4	0	genome.wustl.edu	37	14	105396393	105396393	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	14	105396393	105396393	G	-	DEL	PLD4	ENST00000392593	human	ensembl	69_37n	+1	known	frame_shift_del	c.668	p.H224fs	0.765	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD4	HGNC	ENSG00000166428	159	0	0.00	16	2	11.11	-	-	-
PLXND1	0	genome.wustl.edu	37	3	129303234	129303235	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	3	129303234	129303235	-	G	INS	PLXND1	ENST00000324093	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2023_2022	p.N674fs	0.000:0.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXND1	HGNC	ENSG00000004399	44	0	0.00	24	4	14.29	-	-	-
PTPRCAP	0	genome.wustl.edu	37	11	67203502	67203502	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	11	67203502	67203502	T	-	DEL	PTPRCAP	ENST00000326294	human	ensembl	69_37n	-1	known	frame_shift_del	c.323	p.E108fs	0.876	pirsf_Tyr_Pase_rcpt_C-assoc_CD45-AP	pirsf_Tyr_Pase_rcpt_C-assoc_CD45-AP	-	no_errors	PTPRCAP	HGNC	ENSG00000213402	68	0	0.00	15	2	11.76	-	-	-
QSOX2	0	genome.wustl.edu	37	9	139110971	139110971	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	9	139110971	139110971	C	T	SNP	QSOX2	ENST00000455222	human	ensembl	69_37n	-1	novel	missense	c.163	p.V55I	1.000	NULL	pfam_Evr1_Alr,superfamily_Evr1_Alr	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	QSOX2	HGNC	ENSG00000165661	215	0	0.00	31	16	34.04	-	-	-
RB1	0	genome.wustl.edu	37	13	48955538	48955538	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	13	48955538	48955538	C	T	SNP	RB1	ENST00000267163	human	ensembl	69_37n	+1	known	nonsense	c.1654	p.R552*	1.000	pfam_RB_A,superfamily_Cyclin-like	pfam_Rb_C,pfam_RB_A,pfam_RB_B,pfam_DUF3452_retinoblatoma-assoc,superfamily_Cyclin-like,superfamily_FH2_actin-bd,smart_Cyclin-like	-	no_errors	RB1	HGNC	ENSG00000139687	177	0	0.00	41	90	68.70	-	-	-
RFX1	0	genome.wustl.edu	37	19	14073674	14073674	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	19	14073674	14073674	C	A	SNP	RFX1	ENST00000254325	human	ensembl	69_37n	-1	known	nonsense	c.2773	p.E925*	1.000	NULL	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX1	HGNC	ENSG00000132005	12	0	0.00	3	5	62.50	-	-	-
RIPK1	0	genome.wustl.edu	37	6	3077011	3077012	+	RNA	INS	-	-	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	6	3077011	3077012	-	G	INS	RIPK1	ENST00000490396	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RIPK1	HGNC	ENSG00000137275	50	0	0.00	90	11	10.89	-	-	-
RREB1	0	genome.wustl.edu	37	6	7211929	7211929	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	6	7211929	7211929	G	A	SNP	RREB1	ENST00000379938	human	ensembl	69_37n	+1	known	missense	c.694	p.D232N	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782	201	0	0.00	125	29	18.83	-	-	-
SETDB1	0	genome.wustl.edu	37	1	150917623	150917624	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	1	150917623	150917624	-	G	INS	SETDB1	ENST00000368962	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1179_1180	p.T396fs	0.000:0.000	NULL	smart_Tudor	-	no_errors	SETDB1	HGNC	ENSG00000143379	170	0	0.00	203	24	10.57	-	-	-
SFMBT1	0	genome.wustl.edu	37	3	52977509	52977509	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	3	52977509	52977509	G	A	SNP	SFMBT1	ENST00000358080	human	ensembl	69_37n	-1	known	missense	c.224	p.T75I	1.000	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT1	HGNC	ENSG00000163935	155	1	0.64	100	43	30.07	-	-	-
SH2B1	0	genome.wustl.edu	37	16	28878058	28878058	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	16	28878058	28878058	A	G	SNP	SH2B1	ENST00000322610	human	ensembl	69_37n	+1	known	missense	c.643	p.S215G	0.006	NULL	pfam_Phe_ZIP,pfam_Pleckstrin_homology,pfam_SH2,superfamily_Phe_ZIP,smart_Pleckstrin_homology,smart_SH2,prints_SH2,pfscan_SH2	-	no_errors	SH2B1	HGNC	ENSG00000178188	90	0	0.00	61	12	16.44	-	-	-
SIGLEC1	0	genome.wustl.edu	37	20	3683872	3683872	+	Silent	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	20	3683872	3683872	G	A	SNP	SIGLEC1	ENST00000344754	human	ensembl	69_37n	-1	known	silent	c.1200	p.R400	0.635	smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	SIGLEC1	HGNC	ENSG00000088827	79	0	0.00	42	20	32.26	-	-	-
STRN	0	genome.wustl.edu	37	2	37085129	37085129	+	Silent	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	37085129	37085129	C	T	SNP	STRN	ENST00000263918	human	ensembl	69_37n	-1	known	silent	c.1707	p.T569	0.070	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Striatin_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	STRN	HGNC	ENSG00000115808	130	0	0.00	125	36	22.36	-	-	-
SUOX	0	genome.wustl.edu	37	12	56397811	56397813	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	12	56397811	56397813	TCT	-	DEL	SUOX	ENST00000266971	human	ensembl	69_37n	+1	known	in_frame_del	c.638_640	p.F215in_frame_del	1.000:0.991:1.000	superfamily_OxRdtase_Mopterin-bd_dom,prints_Mopterin_OxRdtase_euk	pfam_OxRdtase_Mopterin-bd_dom,pfam_MoCF_OxRdtse_dimer,pfam_Cyt_B5,superfamily_OxRdtase_Mopterin-bd_dom,superfamily_Ig_E-set,superfamily_Cyt_B5,pfscan_Cyt_B5,prints_Mopterin_OxRdtase_euk,prints_Cyt_B5	-	no_errors	SUOX	HGNC	ENSG00000139531	410	0	0.00	118	21	15.00	-	-	-
TATDN1	0	genome.wustl.edu	37	8	125506171	125506171	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	8	125506171	125506171	G	A	SNP	TATDN1	ENST00000276692	human	ensembl	69_37n	-1	known	missense	c.694	p.H232Y	1.000	pfam_TatD_superfamily,pirsf_DNase_TatD	pfam_TatD_superfamily,pirsf_DNase_TatD	-	no_errors	TATDN1	HGNC	ENSG00000147687	485	0	0.00	404	55	11.96	-	-	-
TEKT2	0	genome.wustl.edu	37	1	36553575	36553575	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	1	36553575	36553575	G	A	SNP	TEKT2	ENST00000207457	human	ensembl	69_37n	+1	known	missense	c.1081	p.D361N	0.997	pfam_Tektin,superfamily_Prefoldin	pfam_Tektin,superfamily_Prefoldin,prints_Tektin	-	no_errors	TEKT2	HGNC	ENSG00000092850	26	0	0.00	14	4	22.22	-	-	-
TOP3A	0	genome.wustl.edu	37	17	18181544	18181545	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	17	18181544	18181545	-	G	INS	TOP3A	ENST00000321105	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2272_2271	p.R757fs	0.001:0.001	NULL	pfam_Topo_IA_cen,pfam_Znf_GRF,pfam_Toprim_domain,pfam_Topo_IA_Znf,superfamily_Topo_IA_core_domain,superfamily_Znf_CCHC,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3A	HGNC	ENSG00000177302	49	0	0.00	21	3	12.50	-	-	-
TP53	0	genome.wustl.edu	37	17	7578413	7578413	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	17	7578413	7578413	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.517	p.V173M	0.996	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	111	0	0.00	26	138	84.15	-	-	-
TSC22D1	0	genome.wustl.edu	37	13	45148691	45148693	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	13	45148691	45148693	TGT	-	DEL	TSC22D1	ENST00000458659	human	ensembl	69_37n	-1	known	in_frame_del	c.1520_1518	p.Q509in_frame_del	0.003:0.003:0.004	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D1	HGNC	ENSG00000102804	68	0	0.00	17	2	10.53	-	-	-
TTC22	0	genome.wustl.edu	37	1	55253434	55253434	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	1	55253434	55253434	G	A	SNP	TTC22	ENST00000371276	human	ensembl	69_37n	-1	known	missense	c.689	p.T230M	0.976	NULL	smart_TPR_repeat	-	no_errors	TTC22	HGNC	ENSG00000006555	86	0	0.00	120	31	20.53	-	-	-
VWA3B	0	genome.wustl.edu	37	2	98928506	98928507	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	2	98928506	98928507	-	G	INS	VWA3B	ENST00000473149	human	ensembl	69_37n	+1	putative	frame_shift_ins	c.1977_1978	p.T662fs	0.000:0.004	NULL	pfscan_VWF_A	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	VWA3B	HGNC	ENSG00000168658	30	0	0.00	37	6	13.95	-	-	-
WDR5	0	genome.wustl.edu	37	9	137019597	137019598	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	9	137019597	137019598	-	C	INS	WDR5	ENST00000358625	human	ensembl	69_37n	+1	known	frame_shift_ins	c.641_642	p.V217fs	1.000:1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_TIF2A_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR5	HGNC	ENSG00000196363	228	0	0.00	54	6	10.00	-	-	-
ZNF33A	0	genome.wustl.edu	37	10	38343498	38343498	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	10	38343498	38343498	T	C	SNP	ZNF33A	ENST00000432900	human	ensembl	69_37n	+1	known	missense	c.464	p.F155S	0.027	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180	145	0	0.00	86	44	33.85	-	-	-
ZNF501	0	genome.wustl.edu	37	3	44776097	44776097	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A0FY-01A-11W-A050-09	TCGA-AN-A0FY-10A-01D-A047-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a6a8bd08-0e60-442d-adce-de020177f82c	aa5cbdd2-e1f7-4d59-962a-3362278d401a	3	44776097	44776097	C	A	SNP	ZNF501	ENST00000396048	human	ensembl	69_37n	+1	known	missense	c.184	p.Q62K	0.006	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF501	HGNC	ENSG00000186446	346	0	0.00	213	81	27.55	-	-	-
