Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADH1B	0	genome.wustl.edu	37	4	100232778	100232778	+	Silent	SNP	G	G	T			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	4	100232778	100232778	G	T	SNP	ADH1B	ENST00000305046	human	ensembl	69_37n	-1	known	silent	c.864	p.G288	0.000	pfam_ADH_C,smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ADH1B	HGNC	ENSG00000196616	156	0	0.00	163	75	31.51	-	-	-
AKAP13	0	genome.wustl.edu	37	15	86124520	86124520	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	15	86124520	86124520	C	T	SNP	AKAP13	ENST00000361243	human	ensembl	69_37n	+1	known	missense	c.3221	p.S1074F	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776	22	0	0.00	22	7	23.33	-	-	-
ANPEP	0	genome.wustl.edu	37	15	90347735	90347736	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	15	90347735	90347736	-	G	INS	ANPEP	ENST00000300060	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1011_1010	p.L338fs	0.115:1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ANPEP	HGNC	ENSG00000166825	37	0	0.00	67	12	15.19	-	-	-
ARHGEF17	0	genome.wustl.edu	37	11	73076908	73076908	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	11	73076908	73076908	G	A	SNP	ARHGEF17	ENST00000263674	human	ensembl	69_37n	+1	known	missense	c.5911	p.G1971S	1.000	superfamily_WD40_repeat_dom	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,superfamily_Vinculin/catenin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF17	HGNC	ENSG00000110237	11	0	0.00	29	6	17.14	-	-	-
BBOX1	0	genome.wustl.edu	37	11	27148982	27148982	+	Silent	SNP	G	G	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	11	27148982	27148982	G	A	SNP	BBOX1	ENST00000263182	human	ensembl	69_37n	+1	known	silent	c.1146	p.R382	0.000	NULL	pfam_Taurine_dOase,pfam_DUF971,tigrfam_2-oxoglut_dOase	-	no_errors	BBOX1	HGNC	ENSG00000129151	74	0	0.00	50	76	60.32	-	-	-
CD1C	0	genome.wustl.edu	37	1	158261934	158261934	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	1	158261934	158261934	G	A	SNP	CD1C	ENST00000368170	human	ensembl	69_37n	+1	known	missense	c.389	p.G130D	0.001	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	CD1C	HGNC	ENSG00000158481	70	0	0.00	148	26	14.94	-	-	-
CHL1	0	genome.wustl.edu	37	3	436516	436516	+	Nonsense_Mutation	SNP	A	A	T			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	3	436516	436516	A	T	SNP	CHL1	ENST00000256509	human	ensembl	69_37n	+1	known	nonsense	c.3055	p.K1019*	0.053	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	CHL1	HGNC	ENSG00000134121	86	0	0.00	87	16	15.53	-	-	-
CHM	0	genome.wustl.edu	37	X	85282501	85282501	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	X	85282501	85282501	A	G	SNP	CHM	ENST00000357749	human	ensembl	69_37n	-1	known	missense	c.110	p.V37A	1.000	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk,prints_GDP_dissociation_inhibitor	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort,prints_GDP_dissociation_inhibitor	-	no_errors	CHM	HGNC	ENSG00000188419	68	0	0.00	66	28	29.47	-	-	-
CLEC17A	0	genome.wustl.edu	37	19	14710534	14710534	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	19	14710534	14710534	G	A	SNP	CLEC17A	ENST00000417570	human	ensembl	69_37n	+1	known	missense	c.652	p.G218S	0.885	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CLEC17A	HGNC	ENSG00000187912	23	0	0.00	40	9	18.37	-	-	-
COMP	0	genome.wustl.edu	37	19	18895094	18895094	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	19	18895094	18895094	C	T	SNP	COMP	ENST00000222271	human	ensembl	69_37n	-1	known	missense	c.1994	p.R665Q	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl	pfam_Thrombospondin_C,pfam_EGF-like_Ca-bd,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,superfamily_ConA-like_lec_gl,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	COMP	HGNC	ENSG00000105664	10	0	0.00	32	14	30.43	-	-	-
CROT	0	genome.wustl.edu	37	7	87005203	87005203	+	Silent	SNP	G	G	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	7	87005203	87005203	G	A	SNP	CROT	ENST00000331536	human	ensembl	69_37n	+1	known	silent	c.810	p.Q270	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CROT	HGNC	ENSG00000005469	144	0	0.00	155	36	18.85	-	-	-
CSTF2	0	genome.wustl.edu	37	X	100083082	100083082	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	X	100083082	100083082	C	T	SNP	CSTF2	ENST00000415585	human	ensembl	69_37n	+1	known	missense	c.880	p.R294W	0.762	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CSTF2	HGNC	ENSG00000101811	211	0	0.00	220	75	25.34	-	-	-
DNAJB8	0	genome.wustl.edu	37	3	128181429	128181429	+	Silent	SNP	C	C	T			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	3	128181429	128181429	C	T	SNP	DNAJB8	ENST00000319153	human	ensembl	69_37n	-1	known	silent	c.660	p.V220	0.724	NULL	pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJB8	HGNC	ENSG00000179407	8	0	0.00	41	13	24.07	-	-	-
GABPA	0	genome.wustl.edu	37	21	27141488	27141488	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	21	27141488	27141488	C	G	SNP	GABPA	ENST00000354828	human	ensembl	69_37n	+1	known	missense	c.1310	p.P437R	1.000	pirsf_TF_GA-bd_asu	pfam_GABP_asu_N,pfam_Ets,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets,pirsf_TF_GA-bd_asu,prints_Ets,pfscan_Ets	-	no_errors	GABPA	HGNC	ENSG00000154727	46	0	0.00	41	17	29.31	-	-	-
GPATCH2	0	genome.wustl.edu	37	1	217688214	217688214	+	Silent	SNP	T	T	G			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	1	217688214	217688214	T	G	SNP	GPATCH2	ENST00000366935	human	ensembl	69_37n	-1	known	silent	c.1116	p.P372	0.191	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH2	HGNC	ENSG00000092978	103	0	0.00	63	19	23.17	-	-	-
HIST2H2BF	0	genome.wustl.edu	37	1	149783828	149783828	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	1	149783828	149783828	C	A	SNP	HIST2H2BF	ENST00000427880	human	ensembl	69_37n	-1	known	missense	c.51	p.K17N	0.854	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST2H2BF	HGNC	ENSG00000203814	105	1	0.94	207	96	31.68	-	-	-
IFNE	0	genome.wustl.edu	37	9	21481249	21481249	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	9	21481249	21481249	G	A	SNP	IFNE	ENST00000448696	human	ensembl	69_37n	-1	known	nonsense	c.445	p.R149*	0.142	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNE	HGNC	ENSG00000184995	110	0	0.00	124	45	26.63	-	-	-
INHBA	0	genome.wustl.edu	37	7	41729515	41729515	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	7	41729515	41729515	C	T	SNP	INHBA	ENST00000242208	human	ensembl	69_37n	-1	known	nonsense	c.1014	p.W338*	1.000	pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaA,prints_Inhibin_asu	-	no_errors	INHBA	HGNC	ENSG00000122641	25	0	0.00	56	24	30.00	-	-	-
MGC16275	0	genome.wustl.edu	37	17	72206133	72206134	+	RNA	INS	-	-	C			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	17	72206133	72206134	-	C	INS	MGC16275	ENST00000499670	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.082:0.088	-	-	-	no_errors	CTD-2514K5.2	Clone_based_vega_gene	ENSG00000246731	24	0	0.00	4	2	33.33	-	-	-
MIR648	0	genome.wustl.edu	37	22	18463645	18463645	+	RNA	SNP	C	C	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	22	18463645	18463645	C	A	SNP	MIR648	ENST00000385046	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR648	HGNC	ENSG00000207780	23	0	0.00	52	15	22.39	-	-	-
MKI67	0	genome.wustl.edu	37	10	129905447	129905447	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	10	129905447	129905447	C	A	SNP	MKI67	ENST00000368654	human	ensembl	69_37n	-1	known	missense	c.4657	p.A1553S	0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	347	0	0.00	339	121	26.30	-	-	-
MTERFD1	0	genome.wustl.edu	37	8	97263275	97263277	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	8	97263275	97263277	AGG	-	DEL	MTERFD1	ENST00000287025	human	ensembl	69_37n	-1	known	in_frame_del	c.536_534	p.L180in_frame_del	1.000:1.000:0.998	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD1	HGNC	ENSG00000156469	249	0	0.00	234	38	13.97	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	79	0	0.00	79	73	48.03	-	-	-
QSOX1	0	genome.wustl.edu	37	1	180159688	180159689	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	1	180159688	180159689	-	A	INS	QSOX1	ENST00000367602	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1261_1262	p.N422fs	0.003:0.001	pfam_Evr1_Alr,superfamily_Evr1_Alr	pfam_Evr1_Alr,pfam_Thioredoxin_domain,superfamily_Evr1_Alr,superfamily_Thioredoxin-like_fold	-	no_errors	QSOX1	HGNC	ENSG00000116260	23	0	0.00	105	28	21.05	-	-	-
RERE	0	genome.wustl.edu	37	1	8421506	8421506	+	Missense_Mutation	SNP	A	A	C			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	1	8421506	8421506	A	C	SNP	RERE	ENST00000337907	human	ensembl	69_37n	-1	known	missense	c.2061	p.S687R	1.000	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599	38	0	0.00	82	41	33.33	-	-	-
RNF157	0	genome.wustl.edu	37	17	74154520	74154520	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	17	74154520	74154520	G	A	SNP	RNF157	ENST00000269391	human	ensembl	69_37n	-1	known	missense	c.1367	p.S456L	0.998	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF157	HGNC	ENSG00000141576	35	0	0.00	74	25	25.25	-	-	-
SPATA1	0	genome.wustl.edu	37	1	85018771	85018772	+	RNA	INS	-	-	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	1	85018771	85018772	-	A	INS	SPATA1	ENST00000460286	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	SPATA1	HGNC	ENSG00000122432	49	0	0.00	27	3	10.00	-	-	-
TARBP1	0	genome.wustl.edu	37	1	234566040	234566040	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	1	234566040	234566040	G	T	SNP	TARBP1	ENST00000040877	human	ensembl	69_37n	-1	known	missense	c.2402	p.T801K	0.001	NULL	pfam_SpoU_MeTrfase,superfamily_ARM-type_fold	-	no_errors	TARBP1	HGNC	ENSG00000059588	8	0	0.00	21	7	25.00	-	-	-
TCF7L2	0	genome.wustl.edu	37	10	114849224	114849224	+	Silent	SNP	T	T	C			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	10	114849224	114849224	T	C	SNP	TCF7L2	ENST00000355717	human	ensembl	69_37n	+1	known	silent	c.549	p.T183	1.000	pfam_CTNNB1-bd_N	pfam_CTNNB1-bd_N,pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	TCF7L2	HGNC	ENSG00000148737	65	0	0.00	53	22	29.33	-	-	-
TRAPPC8	0	genome.wustl.edu	37	18	29497565	29497565	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AN-A0XL-01A-11D-A10M-09	TCGA-AN-A0XL-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1b08a181-a73b-4506-aaa3-3521f2c57207	1acce21e-7513-402f-b586-423415f7cc2c	18	29497565	29497565	C	A	SNP	TRAPPC8	ENST00000283351	human	ensembl	69_37n	-1	known	nonsense	c.418	p.E140*	1.000	NULL	NULL	-	no_errors	TRAPPC8	HGNC	ENSG00000153339	119	0	0.00	107	20	15.75	-	-	-
