Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABT1	0	genome.wustl.edu	37	6	26598210	26598210	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	6	26598210	26598210	G	T	SNP	ABT1	ENST00000274849	human	ensembl	69_37n	+1	known	missense	c.310	p.D104Y	1.000	NULL	NULL	-	no_errors	ABT1	HGNC	ENSG00000146109	28	0	0.00	21	11	34.38	-	-	-
ACVR2A	0	genome.wustl.edu	37	2	148680662	148680662	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	2	148680662	148680662	C	T	SNP	ACVR2A	ENST00000241416	human	ensembl	69_37n	+1	known	missense	c.1198	p.R400C	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Activin_II/TGFBeta-II_recpt	-	no_errors	ACVR2A	HGNC	ENSG00000121989	86	0	0.00	100	55	35.48	-	-	-
AOX1	0	genome.wustl.edu	37	2	201523988	201523988	+	Missense_Mutation	SNP	T	T	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	2	201523988	201523988	T	A	SNP	AOX1	ENST00000374700	human	ensembl	69_37n	+1	known	missense	c.3272	p.V1091E	0.997	pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase	-	no_errors	AOX1	HGNC	ENSG00000138356	105	0	0.00	79	36	31.30	-	-	-
ATIC	0	genome.wustl.edu	37	2	216177253	216177253	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	2	216177253	216177253	G	A	SNP	ATIC	ENST00000236959	human	ensembl	69_37n	+1	known	missense	c.52	p.V18M	0.994	pfam_MGS-like_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	pfam_AICARFT_IMPCHas,pfam_MGS-like_dom,superfamily_Cytidine_deaminase-like,superfamily_MGS-like_dom,smart_MGS-like_dom,smart_AICARFT_IMPCHas,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	-	no_errors	ATIC	HGNC	ENSG00000138363	150	0	0.00	90	50	35.71	-	-	-
ATP9A	0	genome.wustl.edu	37	20	50287755	50287755	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	20	50287755	50287755	C	T	SNP	ATP9A	ENST00000338821	human	ensembl	69_37n	-1	known	nonsense	c.1079	p.W360*	1.000	tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP9A	HGNC	ENSG00000054793	84	0	0.00	74	32	30.19	-	-	-
BRAT1	0	genome.wustl.edu	37	7	2578238	2578238	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	7	2578238	2578238	C	T	SNP	BRAT1	ENST00000340611	human	ensembl	69_37n	-1	known	missense	c.1931	p.R644Q	0.045	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	BRAT1	HGNC	ENSG00000106009	8	0	0.00	6	5	45.45	-	-	-
C18orf54	0	genome.wustl.edu	37	18	51889197	51889197	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	18	51889197	51889197	G	A	SNP	C18orf54	ENST00000300091	human	ensembl	69_37n	+1	known	missense	c.646	p.E216K	0.811	NULL	NULL	-	no_errors	C18orf54	HGNC	ENSG00000166845	161	0	0.00	125	42	25.15	-	-	-
CRHR2	0	genome.wustl.edu	37	7	30704716	30704716	+	Silent	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	7	30704716	30704716	G	A	SNP	CRHR2	ENST00000348438	human	ensembl	69_37n	-1	known	silent	c.594	p.L198	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF2_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF2_rcpt,prints_GPCR_2_diuretic_rcpt	-	no_errors	CRHR2	HGNC	ENSG00000106113	65	0	0.00	53	25	32.05	-	-	-
INO80	0	genome.wustl.edu	37	15	41275191	41275191	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	15	41275191	41275191	G	A	SNP	INO80	ENST00000361937	human	ensembl	69_37n	-1	known	missense	c.4322	p.A1441V	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	INO80	HGNC	ENSG00000128908	25	0	0.00	32	14	30.43	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56155725	56155726	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	5	56155725	56155726	AG	-	DEL	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_del	c.817_818	p.R273fs	0.959:0.996	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	49	0	0.00	42	18	30.00	-	-	-
NT5DC3	0	genome.wustl.edu	37	12	104208866	104208866	+	Missense_Mutation	SNP	T	T	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	12	104208866	104208866	T	A	SNP	NT5DC3	ENST00000392876	human	ensembl	69_37n	-1	known	missense	c.242	p.N81I	1.000	superfamily_HAD-like_dom,pirsf_Pur_nucleotidase	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,pirsf_Pur_nucleotidase,tigrfam_HAD-SF_hydro_IG_5-nucl	-	no_errors	NT5DC3	HGNC	ENSG00000111696	125	0	0.00	120	52	30.23	-	-	-
PDZRN3	0	genome.wustl.edu	37	3	73433946	73433946	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	3	73433946	73433946	C	T	SNP	PDZRN3	ENST00000263666	human	ensembl	69_37n	-1	known	missense	c.1771	p.D591N	1.000	NULL	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440	51	0	0.00	68	32	32.00	-	-	-
PHLDB1	0	genome.wustl.edu	37	11	118486807	118486807	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	11	118486807	118486807	G	A	SNP	PHLDB1	ENST00000361417	human	ensembl	69_37n	+1	known	missense	c.236	p.G79D	1.000	superfamily_SMAD_FHA_domain	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144	55	0	0.00	46	12	20.69	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	117	0	0.00	104	39	27.27	-	-	-
PTPRM	0	genome.wustl.edu	37	18	8088802	8088802	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	18	8088802	8088802	C	T	SNP	PTPRM	ENST00000583289	human	ensembl	69_37n	+1	novel	missense	c.227	p.P76L	0.007	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_start_codon:pseudogene:no_stop_codon	PTPRM	HGNC	ENSG00000173482	148	0	0.00	147	44	23.04	-	-	-
RCSD1	0	genome.wustl.edu	37	1	167667018	167667018	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	1	167667018	167667018	G	T	SNP	RCSD1	ENST00000367854	human	ensembl	69_37n	+1	known	missense	c.1157	p.G386V	0.000	NULL	pfam_RCSD	-	no_errors	RCSD1	HGNC	ENSG00000198771	24	0	0.00	25	6	19.35	-	-	-
ROR1	0	genome.wustl.edu	37	1	64643303	64643303	+	Missense_Mutation	SNP	A	A	C			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	1	64643303	64643303	A	C	SNP	ROR1	ENST00000371079	human	ensembl	69_37n	+1	known	missense	c.1579	p.M527L	0.865	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	ROR1	HGNC	ENSG00000185483	89	0	0.00	64	36	36.00	-	-	-
SH3PXD2B	0	genome.wustl.edu	37	5	171766645	171766645	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	5	171766645	171766645	C	A	SNP	SH3PXD2B	ENST00000311601	human	ensembl	69_37n	-1	known	missense	c.1464	p.W488C	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,pfam_SH3-like_bac,pfam_DUF1058,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2B	HGNC	ENSG00000174705	62	0	0.00	49	30	37.97	-	-	-
SLC25A2	0	genome.wustl.edu	37	5	140682837	140682837	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	5	140682837	140682837	G	A	SNP	SLC25A2	ENST00000239451	human	ensembl	69_37n	-1	known	missense	c.596	p.A199V	0.995	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A2	HGNC	ENSG00000120329	117	0	0.00	98	45	31.47	-	-	-
SLC44A2	0	genome.wustl.edu	37	19	10742416	10742416	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	19	10742416	10742416	A	G	SNP	SLC44A2	ENST00000335757	human	ensembl	69_37n	+1	known	missense	c.617	p.E206G	1.000	NULL	pfam_Choline_transptr-like	-	no_errors	SLC44A2	HGNC	ENSG00000129353	59	0	0.00	69	40	36.70	-	-	-
SLC4A11	0	genome.wustl.edu	37	20	3214874	3214874	+	Silent	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	20	3214874	3214874	G	A	SNP	SLC4A11	ENST00000380059	human	ensembl	69_37n	-1	known	silent	c.507	p.N169	0.722	superfamily_PTrfase/Anion_transptr	pfam_HCO3_transpt_C,pfam_PTS_EIIA_2,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk	-	no_errors	SLC4A11	HGNC	ENSG00000088836	71	0	0.00	74	41	35.65	-	-	-
SPDYE6	0	genome.wustl.edu	37	7	102296747	102296747	+	Silent	SNP	G	G	A			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	7	102296747	102296747	G	A	SNP	SPDYE6	ENST00000436228	human	ensembl	69_37n	+1	known	silent	c.663	p.S221	0.086	pfam_Cell_cycle_regulatory_Spy1	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYE6	HGNC	ENSG00000173678	39	0	0.00	35	4	10.26	-	-	-
TAF3	0	genome.wustl.edu	37	10	8006100	8006103	+	Frame_Shift_Del	DEL	ATTG	ATTG	-			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	ATTG	ATTG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	10	8006100	8006103	ATTG	-	DEL	TAF3	ENST00000344293	human	ensembl	69_37n	+1	known	frame_shift_del	c.627_630	p.L210fs	0.166:0.220:0.877:0.928	NULL	pfam_BTP,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Histone-fold,smart_BTP,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	TAF3	HGNC	ENSG00000165632	50	0	0.00	43	24	32.88	-	-	-
THNSL2	0	genome.wustl.edu	37	2	88482500	88482500	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	2	88482500	88482500	C	-	DEL	THNSL2	ENST00000324166	human	ensembl	69_37n	+1	known	frame_shift_del	c.985	p.L329fs	1.000	pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,tigrfam_Thr_synthase	pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,tigrfam_Thr_synthase	-	no_errors	THNSL2	HGNC	ENSG00000144115	82	0	0.00	88	26	22.41	-	-	-
TNFRSF8	0	genome.wustl.edu	37	1	12157238	12157238	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	1	12157238	12157238	G	T	SNP	TNFRSF8	ENST00000263932	human	ensembl	69_37n	+1	known	missense	c.232	p.A78S	0.000	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_8	-	no_errors	TNFRSF8	HGNC	ENSG00000120949	115	0	0.00	95	47	32.87	-	-	-
XRCC6BP1	0	genome.wustl.edu	37	12	58339430	58339430	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	12	58339430	58339430	G	-	DEL	XRCC6BP1	ENST00000300145	human	ensembl	69_37n	+1	known	frame_shift_del	c.207	p.D71fs	0.001	pfam_Peptidase_M76_ATP23	pfam_Peptidase_M76_ATP23	-	no_errors	XRCC6BP1	HGNC	ENSG00000166896	266	0	0.00	231	89	27.22	-	-	-
XRCC6BP1	0	genome.wustl.edu	37	12	58339432	58339432	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AN-A0XS-01A-22D-A10G-09	TCGA-AN-A0XS-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f1b5268d-556f-404f-a956-770df4a1e7aa	3a722354-b991-44cf-9ab8-f276b4a38701	12	58339432	58339432	T	-	DEL	XRCC6BP1	ENST00000300145	human	ensembl	69_37n	+1	known	frame_shift_del	c.209	p.D71fs	0.993	pfam_Peptidase_M76_ATP23	pfam_Peptidase_M76_ATP23	-	no_errors	XRCC6BP1	HGNC	ENSG00000166896	270	0	0.00	233	89	27.05	-	-	-
