Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AP3D1	0	genome.wustl.edu	37	19	2114127	2114127	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	19	2114127	2114127	C	-	DEL	AP3D1	ENST00000355272	human	ensembl	69_37n	-1	known	frame_shift_del	c.2598	p.K867fs	0.158	pfam_BLV_receptor,pirsf_AP3_complex_dsu	pfam_BLV_receptor,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	-	no_errors	AP3D1	HGNC	ENSG00000065000	163	0	0.00	124	15	10.71	-	-	-
C2orf16	0	genome.wustl.edu	37	2	27803312	27803312	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	2	27803312	27803312	G	C	SNP	C2orf16	ENST00000408964	human	ensembl	69_37n	+1	known	missense	c.3873	p.K1291N	0.063	NULL	NULL	-	no_errors	C2orf16	HGNC	ENSG00000221843	108	0	0.00	57	16	21.92	-	-	-
C5orf60	0	genome.wustl.edu	37	5	179071958	179071958	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	5	179071958	179071958	C	G	SNP	C5orf60	ENST00000448248	human	ensembl	69_37n	-1	known	missense	c.64	p.D22H	0.027	NULL	NULL	-	no_errors	C5orf60	HGNC	ENSG00000204661	29	0	0.00	74	13	14.94	-	-	-
CCDC74B	0	genome.wustl.edu	37	2	130897620	130897620	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	2	130897620	130897620	A	G	SNP	CCDC74B	ENST00000392984	human	ensembl	69_37n	-1	known	missense	c.1232	p.V411A	0.003	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076	12	0	0.00	48	21	30.43	-	-	-
GOLGA6L2	0	genome.wustl.edu	37	15	23685205	23685206	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	15	23685205	23685206	-	C	INS	GOLGA6L2	ENST00000567107	human	ensembl	69_37n	-1	putative	frame_shift_ins	c.2417_2416	p.A806fs	0.004:0.005	NULL	NULL	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	27	0	0.00	18	5	21.74	-	-	-
GPR98	0	genome.wustl.edu	37	5	89990148	89990149	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	5	89990148	89990149	TA	-	DEL	GPR98	ENST00000405460	human	ensembl	69_37n	+1	known	frame_shift_del	c.7575_7576	p.I2526fs	0.154:0.184	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	179	0	0.00	153	36	19.05	-	-	-
POTEB	0	genome.wustl.edu	37	15	22077651	22077651	+	Silent	SNP	A	A	G			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	15	22077651	22077651	A	G	SNP	POTEB	ENST00000439682	human	ensembl	69_37n	-1	known	silent	c.579	p.A193	0.570	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEB	HGNC	ENSG00000233917	11	0	0.00	4	3	42.86	-	-	-
RPS27L	0	genome.wustl.edu	37	15	63448632	63448633	+	In_Frame_Ins	INS	-	-	TAC			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	15	63448632	63448633	-	TAC	INS	RPS27L	ENST00000330964	human	ensembl	69_37n	-1	known	in_frame_ins	c.95_94	p.F32in_frame_insCI	1.000:1.000	pfam_Ribosomal_S27e,superfamily_Ribosomal_zn-bd_dom	pfam_Ribosomal_S27e,superfamily_Ribosomal_zn-bd_dom	-	no_errors	RPS27L	HGNC	ENSG00000185088	861	0	0.00	172	23	11.79	-	-	-
TG	0	genome.wustl.edu	37	8	133899093	133899093	+	Silent	SNP	A	A	G			TCGA-AO-A03U-01B-21D-A10M-09	TCGA-AO-A03U-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1e0ecd57-5c7d-4495-874d-9e286c999c22	24b629ef-6829-4494-8843-9877a56303cf	8	133899093	133899093	A	G	SNP	TG	ENST00000220616	human	ensembl	69_37n	+1	known	silent	c.1476	p.R492	0.361	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	48	0	0.00	59	14	19.18	-	-	-
