Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTN2	0	genome.wustl.edu	37	1	236894614	236894614	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	236894614	236894614	G	T	SNP	ACTN2	ENST00000366578	human	ensembl	69_37n	+1	known	missense	c.697	p.D233Y	1.000	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_Ca-bd,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	ACTN2	HGNC	ENSG00000077522	187	0	0.00	192	64	25.00	-	-	-
ASPM	0	genome.wustl.edu	37	1	197062229	197062230	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	197062229	197062230	-	A	INS	ASPM	ENST00000367409	human	ensembl	69_37n	-1	known	frame_shift_ins	c.9247_9246	p.T3082fs	0.055:0.074	pfam_IQ_motif_EF-hand-BS,superfamily_ARM-type_fold,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279	135	0	0.00	27	4	12.90	-	-	-
ATCAY	0	genome.wustl.edu	37	19	3908273	3908273	+	Silent	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	19	3908273	3908273	C	T	SNP	ATCAY	ENST00000301260	human	ensembl	69_37n	+1	known	silent	c.552	p.Y184	0.998	pfam_Bcl2-/adenovirus-E1B,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	ATCAY	HGNC	ENSG00000167654	29	0	0.00	27	22	44.00	-	-	-
BAI2	0	genome.wustl.edu	37	1	32210310	32210310	+	Silent	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	32210310	32210310	C	T	SNP	BAI2	ENST00000373658	human	ensembl	69_37n	-1	known	silent	c.861	p.P287	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	96	0	0.00	158	18	10.17	-	-	-
BCAN	0	genome.wustl.edu	37	1	156622582	156622582	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	156622582	156622582	A	G	SNP	BCAN	ENST00000329117	human	ensembl	69_37n	+1	known	missense	c.1840	p.N614D	0.689	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EGF-like_dom,superfamily_C-type_lectin_fold,superfamily_Complement_control_module,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EGF-like,smart_C-type_lectin,smart_Sushi_SCR_CCP,prints_Link,prints_AntifreezeII,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like	-	no_errors	BCAN	HGNC	ENSG00000132692	20	0	0.00	44	23	34.33	-	-	-
BTBD1	0	genome.wustl.edu	37	15	83710593	83710593	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	15	83710593	83710593	G	A	SNP	BTBD1	ENST00000261721	human	ensembl	69_37n	-1	known	missense	c.749	p.A250V	1.000	pfam_BACK,smart_BACK	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD1	HGNC	ENSG00000064726	210	0	0.00	139	116	44.96	-	-	-
BTBD1	0	genome.wustl.edu	37	15	83710594	83710594	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	15	83710594	83710594	C	T	SNP	BTBD1	ENST00000261721	human	ensembl	69_37n	-1	known	missense	c.748	p.A250T	1.000	pfam_BACK,smart_BACK	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD1	HGNC	ENSG00000064726	213	0	0.00	143	113	43.97	-	-	-
CCDC168	0	genome.wustl.edu	37	13	103382805	103382805	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	13	103382805	103382805	T	-	DEL	CCDC168	ENST00000322527	human	ensembl	69_37n	-1	known	frame_shift_del	c.6355	p.R2119fs	0.000	NULL	NULL	-	no_errors	CCDC168	HGNC	ENSG00000175820	84	0	0.00	12	2	14.29	-	-	-
CCT3	0	genome.wustl.edu	37	1	156305652	156305652	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	156305652	156305652	C	G	SNP	CCT3	ENST00000295688	human	ensembl	69_37n	-1	known	missense	c.59	p.R20T	1.000	superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_gamma	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_gamma	-	no_errors	CCT3	HGNC	ENSG00000163468	257	0	0.00	490	132	21.19	-	-	-
CDH10	0	genome.wustl.edu	37	5	24535931	24535931	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	5	24535931	24535931	C	-	DEL	CDH10	ENST00000264463	human	ensembl	69_37n	-1	known	frame_shift_del	c.527	p.G176fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH10	HGNC	ENSG00000040731	90	0	0.00	14	2	12.50	-	-	-
CDX4	0	genome.wustl.edu	37	X	72674300	72674300	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	X	72674300	72674300	C	T	SNP	CDX4	ENST00000373514	human	ensembl	69_37n	+1	known	missense	c.734	p.S245L	0.984	superfamily_Homeodomain-like	pfam_Caudal_activation_dom,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	CDX4	HGNC	ENSG00000131264	229	0	0.00	95	161	62.89	-	-	-
CHRM2	0	genome.wustl.edu	37	7	136700083	136700084	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	7	136700083	136700084	-	G	INS	CHRM2	ENST00000320658	human	ensembl	69_37n	+1	known	frame_shift_ins	c.471_472	p.A157fs	0.201:1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Musac_M2_rcpt,prints_Musac_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	CHRM2	HGNC	ENSG00000181072	53	0	0.00	21	4	16.00	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16952334	16952334	+	RNA	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	16952334	16952334	G	A	SNP	CROCCP2	ENST00000412962	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.983	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	12	0	0.00	18	7	28.00	-	-	-
CSMD1	0	genome.wustl.edu	37	8	3855433	3855433	+	Silent	SNP	T	T	C			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	8	3855433	3855433	T	C	SNP	CSMD1	ENST00000520002	human	ensembl	69_37n	-1	known	silent	c.810	p.P270	0.009	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	73	0	0.00	22	11	33.33	-	-	-
EARS2	0	genome.wustl.edu	37	16	23535677	23535677	+	RNA	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	16	23535677	23535677	C	T	SNP	EARS2	ENST00000564987	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EARS2	HGNC	ENSG00000103356	119	0	0.00	122	41	25.00	-	-	-
ECM2	0	genome.wustl.edu	37	9	95277299	95277301	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	9	95277299	95277301	TCT	-	DEL	ECM2	ENST00000344604	human	ensembl	69_37n	-1	known	in_frame_del	c.668_666	p.E222in_frame_del	0.015:0.011:0.071	NULL	pfam_Leu-rich_rpt,pfam_VWF_C,smart_VWF_C,smart_Leu-rich_rpt_typical-subtyp,pfscan_VWF_C	-	no_errors	ECM2	HGNC	ENSG00000106823	152	0	0.00	127	79	38.16	-	-	-
FASN	0	genome.wustl.edu	37	17	80054315	80054315	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	17	80054315	80054315	C	G	SNP	FASN	ENST00000306749	human	ensembl	69_37n	-1	known	missense	c.7	p.E3Q	1.000	pfam_Ketoacyl_synth_N,superfamily_Thiolase-like	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	28	0	0.00	32	13	28.89	-	-	-
FCRL3	0	genome.wustl.edu	37	1	157667171	157667171	+	Silent	SNP	G	G	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	157667171	157667171	G	T	SNP	FCRL3	ENST00000368186	human	ensembl	69_37n	-1	known	silent	c.603	p.P201	0.002	smart_Ig_sub,pfscan_Ig-like	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	FCRL3	HGNC	ENSG00000160856	62	0	0.00	25	29	53.70	-	-	-
FHAD1	0	genome.wustl.edu	37	1	15694118	15694118	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	15694118	15694118	G	A	SNP	FHAD1	ENST00000375999	human	ensembl	69_37n	+1	known	missense	c.3248	p.R1083K	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	FHAD1	HGNC	ENSG00000142621	17	0	0.00	7	19	73.08	-	-	-
HK3	0	genome.wustl.edu	37	5	176308376	176308376	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	5	176308376	176308376	G	A	SNP	HK3	ENST00000292432	human	ensembl	69_37n	-1	known	missense	c.2554	p.R852W	1.000	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK3	HGNC	ENSG00000160883	57	0	0.00	101	13	11.40	-	-	-
HYDIN	0	genome.wustl.edu	37	16	71008518	71008518	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	16	71008518	71008518	G	A	SNP	HYDIN	ENST00000316490	human	ensembl	69_37n	-1	known	nonsense	c.4825	p.R1609*	0.048	NULL	superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	77	0	0.00	1	26	96.30	-	-	-
IL17RA	0	genome.wustl.edu	37	22	17577966	17577966	+	Silent	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	22	17577966	17577966	G	A	SNP	IL17RA	ENST00000319363	human	ensembl	69_37n	+1	known	silent	c.153	p.T51	0.009	NULL	pfam_SEFIR	-	no_errors	IL17RA	HGNC	ENSG00000177663	324	0	0.00	256	216	45.76	-	-	-
IREB2	0	genome.wustl.edu	37	15	78758680	78758680	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	15	78758680	78758680	A	G	SNP	IREB2	ENST00000258886	human	ensembl	69_37n	+1	known	missense	c.478	p.K160E	0.004	superfamily_Acoase/IPM_deHydtase_lsu_aba	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381	149	0	0.00	57	33	36.26	-	-	-
JAK2	0	genome.wustl.edu	37	9	5077523	5077523	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	9	5077523	5077523	A	-	DEL	JAK2	ENST00000381652	human	ensembl	69_37n	+1	known	frame_shift_del	c.1935	p.N646fs	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak2,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK2	HGNC	ENSG00000096968	45	0	0.00	13	2	13.33	-	-	-
KIF26B	0	genome.wustl.edu	37	1	245861431	245861431	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	1	245861431	245861431	C	T	SNP	KIF26B	ENST00000407071	human	ensembl	69_37n	+1	known	missense	c.5848	p.P1950S	1.000	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849	96	0	0.00	238	52	17.87	-	-	-
MLL3	0	genome.wustl.edu	37	7	151880094	151880094	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	7	151880094	151880094	C	A	SNP	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	nonsense	c.5230	p.E1744*	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	290	0	0.00	50	101	66.89	-	-	-
MRPL45	0	genome.wustl.edu	37	17	36453190	36453190	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	17	36453190	36453190	G	C	SNP	MRPL45	ENST00000312513	human	ensembl	69_37n	+1	known	missense	c.41	p.R14T	0.616	NULL	pfam_Tim44-related/Ribosome_L45,smart_Tim44-related/Ribosome_L45	-	no_errors	MRPL45	HGNC	ENSG00000174100	222	0	0.00	200	153	43.34	-	-	-
NDNF	0	genome.wustl.edu	37	4	121958762	121958763	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	4	121958762	121958763	-	TG	INS	NDNF	ENST00000379692	human	ensembl	69_37n	-1	known	frame_shift_ins	c.364_363	p.G121fs	1.000:0.865	NULL	pfam_DUF2369,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	NDNF	HGNC	ENSG00000173376	68	0	0.00	17	2	10.53	-	-	-
OTOP1	0	genome.wustl.edu	37	4	4199797	4199797	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	4	4199797	4199797	G	A	SNP	OTOP1	ENST00000296358	human	ensembl	69_37n	-1	known	missense	c.764	p.T255M	0.710	NULL	pfam_Otopetrin	-	no_errors	OTOP1	HGNC	ENSG00000163982	38	0	0.00	15	17	53.12	-	-	-
PCDHA6	0	genome.wustl.edu	37	5	140208763	140208763	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	5	140208763	140208763	G	A	SNP	PCDHA6	ENST00000529310	human	ensembl	69_37n	+1	known	missense	c.1087	p.A363T	0.909	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA6	HGNC	ENSG00000081842	75	0	0.00	65	56	45.90	-	-	-
PHKA2	0	genome.wustl.edu	37	X	18969226	18969226	+	Silent	SNP	G	G	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	X	18969226	18969226	G	T	SNP	PHKA2	ENST00000379942	human	ensembl	69_37n	-1	known	silent	c.450	p.A150	0.966	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC	ENSG00000044446	120	0	0.00	79	148	65.20	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	126	0	0.00	25	17	40.48	-	-	-
PRDM1	0	genome.wustl.edu	37	6	106553787	106553787	+	Silent	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	6	106553787	106553787	C	T	SNP	PRDM1	ENST00000369096	human	ensembl	69_37n	+1	known	silent	c.1752	p.F584	0.932	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_Znf_PRDM1,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM1,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM1	HGNC	ENSG00000057657	12	0	0.00	13	13	50.00	-	-	-
PRKD2	0	genome.wustl.edu	37	19	47207835	47207835	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	19	47207835	47207835	G	A	SNP	PRKD2	ENST00000291281	human	ensembl	69_37n	-1	known	missense	c.583	p.R195C	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_DAG/PE-bd,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PRKD2	HGNC	ENSG00000105287	32	0	0.00	21	28	57.14	-	-	-
PRPSAP2	0	genome.wustl.edu	37	17	18785979	18785979	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	17	18785979	18785979	C	T	SNP	PRPSAP2	ENST00000268835	human	ensembl	69_37n	+1	known	nonsense	c.511	p.Q171*	1.000	tigrfam_Rib-P_diPkinase	tigrfam_Rib-P_diPkinase	-	no_errors	PRPSAP2	HGNC	ENSG00000141127	202	1	0.49	54	91	62.33	-	-	-
RASGRF2	0	genome.wustl.edu	37	5	80390150	80390150	+	Silent	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	5	80390150	80390150	G	A	SNP	RASGRF2	ENST00000265080	human	ensembl	69_37n	+1	known	silent	c.1587	p.L529	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF2	HGNC	ENSG00000113319	160	0	0.00	100	47	31.97	-	-	-
SAP25	0	genome.wustl.edu	37	7	100170189	100170189	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	7	100170189	100170189	C	T	SNP	SAP25	ENST00000538735	human	ensembl	69_37n	-1	known	missense	c.321	p.M107I	0.187	NULL	NULL	-	no_errors	SAP25	HGNC	ENSG00000205307	23	0	0.00	35	16	31.37	-	-	-
SLC39A6	0	genome.wustl.edu	37	18	33706858	33706858	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	18	33706858	33706858	G	C	SNP	SLC39A6	ENST00000269187	human	ensembl	69_37n	-1	known	missense	c.113	p.P38R	0.010	NULL	pfam_ZIP	-	no_errors	SLC39A6	HGNC	ENSG00000141424	175	0	0.00	104	101	49.27	-	-	-
TCAIM	0	genome.wustl.edu	37	3	44441887	44441887	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	3	44441887	44441887	G	A	SNP	TCAIM	ENST00000342649	human	ensembl	69_37n	+1	known	missense	c.926	p.R309K	0.893	NULL	NULL	-	no_errors	TCAIM	HGNC	ENSG00000179152	181	0	0.00	45	49	52.13	-	-	-
TEX15	0	genome.wustl.edu	37	8	30701516	30701516	+	Missense_Mutation	SNP	T	T	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	8	30701516	30701516	T	A	SNP	TEX15	ENST00000256246	human	ensembl	69_37n	-1	known	missense	c.5018	p.N1673I	0.817	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863	137	0	0.00	25	38	60.32	-	-	-
TMEM247	0	genome.wustl.edu	37	2	46707851	46707851	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	2	46707851	46707851	G	A	SNP	TMEM247	ENST00000434431	human	ensembl	69_37n	+1	known	missense	c.425	p.R142Q	1.000	NULL	NULL	-	no_stop_codon:bad_bp_length_for_coding_region	TMEM247	HGNC	ENSG00000187600	14	0	0.00	18	9	33.33	-	-	-
TTN	0	genome.wustl.edu	37	2	179514309	179514310	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-AO-A125-01A-11D-A10M-09	TCGA-AO-A125-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	17669c6d-2eeb-4d56-ac72-f06bfafb7e42	423d3a68-5276-4fa6-bc76-298f23758452	2	179514309	179514310	-	TG	INS	TTN	ENST00000589042	human	ensembl	69_37n	-1	putative	frame_shift_ins	c.39945_39944	p.K13316fs	0.948:0.886	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_PPAK_motif,pfam_Titin_Z,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,superfamily_ARM-type_fold,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	9	0	0.00	2	2	50.00	-	-	-
