Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTA1	0	genome.wustl.edu	37	1	229567889	229567890	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	1	229567889	229567890	GT	-	DEL	ACTA1	ENST00000366684	human	ensembl	69_37n	-1	known	frame_shift_del	c.660_659	p.Y220fs	0.998:1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTA1	HGNC	ENSG00000143632	52	0	0.00	29	63	67.02	-	-	-
ACTA1	0	genome.wustl.edu	37	1	229567893	229567894	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	1	229567893	229567894	CA	-	DEL	ACTA1	ENST00000366684	human	ensembl	69_37n	-1	known	frame_shift_del	c.656_655	p.C219fs	1.000:1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTA1	HGNC	ENSG00000143632	53	0	0.00	29	62	68.13	-	-	-
ACTA1	0	genome.wustl.edu	37	1	229567901	229567901	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	1	229567901	229567901	C	-	DEL	ACTA1	ENST00000366684	human	ensembl	69_37n	-1	known	frame_shift_del	c.648	p.K217fs	1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTA1	HGNC	ENSG00000143632	50	0	0.00	28	57	64.04	-	-	-
ALMS1	0	genome.wustl.edu	37	2	73675332	73675332	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	2	73675332	73675332	C	T	SNP	ALMS1	ENST00000264448	human	ensembl	69_37n	+1	known	missense	c.1675	p.P559S	0.000	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	201	0	0.00	131	69	34.50	-	-	-
ANO5	0	genome.wustl.edu	37	11	22294371	22294371	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	11	22294371	22294371	C	A	SNP	ANO5	ENST00000324559	human	ensembl	69_37n	+1	known	missense	c.2071	p.P691T	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO5	HGNC	ENSG00000171714	496	0	0.00	284	68	19.26	-	-	-
ANP32E	0	genome.wustl.edu	37	1	150202960	150202960	+	Silent	SNP	G	G	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	1	150202960	150202960	G	C	SNP	ANP32E	ENST00000314136	human	ensembl	69_37n	-1	known	silent	c.273	p.T91	0.996	pfam_Leu-rich_rpt	pfam_Leu-rich_rpt	-	no_errors	ANP32E	HGNC	ENSG00000143401	128	0	0.00	109	69	38.76	-	-	-
ARHGAP11B	0	genome.wustl.edu	37	15	31042620	31042621	+	RNA	INS	-	-	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	15	31042620	31042621	-	A	INS	ARHGAP11B	ENST00000562954	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ARHGAP11B	HGNC	ENSG00000187951	74	0	0.00	40	6	13.04	-	-	-
ATP1A2	0	genome.wustl.edu	37	1	160098503	160098503	+	Missense_Mutation	SNP	A	A	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	1	160098503	160098503	A	G	SNP	ATP1A2	ENST00000361216	human	ensembl	69_37n	+1	known	missense	c.1079	p.E360G	1.000	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP1A2	HGNC	ENSG00000018625	242	0	0.00	229	41	15.19	-	-	-
BZW1	0	genome.wustl.edu	37	2	201683608	201683608	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	2	201683608	201683608	C	G	SNP	BZW1	ENST00000409600	human	ensembl	69_37n	+1	known	missense	c.950	p.A317G	1.000	superfamily_ARM-type_fold	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	-	no_errors	BZW1	HGNC	ENSG00000082153	83	0	0.00	55	13	19.12	-	-	-
C9orf66	0	genome.wustl.edu	37	9	214629	214630	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	9	214629	214630	-	C	INS	C9orf66	ENST00000382387	human	ensembl	69_37n	-1	known	frame_shift_ins	c.768_767	p.P257fs	0.123:0.141	NULL	NULL	-	no_errors	C9orf66	HGNC	ENSG00000183784	29	0	0.00	29	13	30.95	-	-	-
CLIP2	0	genome.wustl.edu	37	7	73803543	73803544	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	7	73803543	73803544	-	G	INS	CLIP2	ENST00000223398	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2674_2675	p.S892fs	1.000:0.998	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665	53	0	0.00	77	45	36.89	-	-	-
CLIP2	0	genome.wustl.edu	37	7	73803546	73803547	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	7	73803546	73803547	-	T	INS	CLIP2	ENST00000223398	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2677_2678	p.G893fs	1.000:1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665	49	0	0.00	57	45	44.12	-	-	-
CNNM2	0	genome.wustl.edu	37	10	104679069	104679070	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	10	104679069	104679070	-	T	INS	CNNM2	ENST00000457502	human	ensembl	69_37n	+1	known	frame_shift_ins	c.832_833	p.G278fs	1.000:1.000	pfam_DUF21	pfam_DUF21,superfamily_cNMP-bd-like	-	no_errors	CNNM2	HGNC	ENSG00000148842	27	0	0.00	19	18	48.65	-	-	-
CRY2	0	genome.wustl.edu	37	11	45880386	45880386	+	Silent	SNP	A	A	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	11	45880386	45880386	A	T	SNP	CRY2	ENST00000443527	human	ensembl	69_37n	+1	known	silent	c.492	p.V164	1.000	pfam_DNA_photolyase_N,superfamily_DNA_photolyase_N	pfam_Photolyase_FAD-bd/Cryptochr_C,pfam_DNA_photolyase_N,superfamily_Photolyase_FAD-bd/Cryptochr_C,superfamily_DNA_photolyase_N	-	no_errors	CRY2	HGNC	ENSG00000121671	174	0	0.00	96	26	21.31	-	-	-
CXorf64	0	genome.wustl.edu	37	X	125955269	125955269	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	X	125955269	125955269	G	T	SNP	CXorf64	ENST00000371125	human	ensembl	69_37n	+1	known	missense	c.648	p.R216S	0.000	NULL	NULL	-	no_errors	CXorf64	HGNC	ENSG00000183631	162	0	0.00	119	40	25.16	-	-	-
CYP7B1	0	genome.wustl.edu	37	8	65528565	65528565	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	8	65528565	65528565	G	T	SNP	CYP7B1	ENST00000310193	human	ensembl	69_37n	-1	known	missense	c.533	p.A178E	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817	69	0	0.00	78	11	12.36	-	-	-
DCHS2	0	genome.wustl.edu	37	4	155160373	155160373	+	Missense_Mutation	SNP	A	A	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	4	155160373	155160373	A	C	SNP	DCHS2	ENST00000357232	human	ensembl	69_37n	-1	known	missense	c.6076	p.S2026A	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	219	0	0.00	147	38	20.43	-	-	-
DTX1	0	genome.wustl.edu	37	12	113515623	113515623	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	12	113515623	113515623	C	G	SNP	DTX1	ENST00000257600	human	ensembl	69_37n	+1	known	missense	c.654	p.I218M	1.000	NULL	pfam_WWE-dom,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX1	HGNC	ENSG00000135144	8	0	0.00	8	5	38.46	-	-	-
DTX1	0	genome.wustl.edu	37	12	113515624	113515624	+	Silent	SNP	C	C	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	12	113515624	113515624	C	T	SNP	DTX1	ENST00000257600	human	ensembl	69_37n	+1	known	silent	c.655	p.L219	1.000	NULL	pfam_WWE-dom,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX1	HGNC	ENSG00000135144	8	0	0.00	7	4	36.36	-	-	-
ERMP1	0	genome.wustl.edu	37	9	5805716	5805716	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	9	5805716	5805716	C	A	SNP	ERMP1	ENST00000339450	human	ensembl	69_37n	-1	known	missense	c.1618	p.V540F	0.012	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	ERMP1	HGNC	ENSG00000099219	357	0	0.00	363	67	15.55	-	-	-
FAM75D1	0	genome.wustl.edu	37	9	84607639	84607639	+	Missense_Mutation	SNP	T	T	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	9	84607639	84607639	T	A	SNP	FAM75D1	ENST00000344803	human	ensembl	69_37n	+1	known	missense	c.2254	p.F752I	0.000	NULL	NULL	-	no_errors	FAM75D1	HGNC	ENSG00000214929	221	0	0.00	134	22	14.10	-	-	-
FOXP4	0	genome.wustl.edu	37	6	41557744	41557745	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	6	41557744	41557745	TC	-	DEL	FOXP4	ENST00000307972	human	ensembl	69_37n	+1	known	frame_shift_del	c.1193_1194	p.S399fs	1.000:1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP4	HGNC	ENSG00000137166	33	0	0.00	41	8	16.33	-	-	-
GPCPD1	0	genome.wustl.edu	37	20	5556511	5556511	+	Silent	SNP	A	A	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	20	5556511	5556511	A	C	SNP	GPCPD1	ENST00000379019	human	ensembl	69_37n	-1	known	silent	c.819	p.T273	0.931	NULL	pfam_GlyceroP-diester-Pdiesterase,pfam_CBM_fam20,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Carb-bd-like_fold,pfscan_CBM_fam20	-	no_errors	GPCPD1	HGNC	ENSG00000125772	155	0	0.00	146	33	18.33	-	-	-
GPR153	0	genome.wustl.edu	37	1	6314757	6314758	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	1	6314757	6314758	-	A	INS	GPR153	ENST00000377893	human	ensembl	69_37n	-1	known	frame_shift_ins	c.209_208	p.R70fs	1.000:1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_GPCR_153,prints_GPCR_153/162	-	no_errors	GPR153	HGNC	ENSG00000158292	59	0	0.00	52	26	33.33	-	-	-
GZMH	0	genome.wustl.edu	37	14	25075891	25075891	+	Missense_Mutation	SNP	T	T	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	14	25075891	25075891	T	A	SNP	GZMH	ENST00000216338	human	ensembl	69_37n	-1	known	missense	c.659	p.N220I	0.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	GZMH	HGNC	ENSG00000100450	234	0	0.00	117	30	20.41	-	-	-
IFI16	0	genome.wustl.edu	37	1	159021843	159021843	+	Silent	SNP	A	A	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	1	159021843	159021843	A	G	SNP	IFI16	ENST00000295809	human	ensembl	69_37n	+1	known	silent	c.2040	p.S680	0.001	pfam_HIN200/IF120x,pfscan_HIN200/IF120x	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	IFI16	HGNC	ENSG00000163565	79	0	0.00	60	16	21.05	-	-	-
ISOC1	0	genome.wustl.edu	37	5	128448599	128448599	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	5	128448599	128448599	C	T	SNP	ISOC1	ENST00000173527	human	ensembl	69_37n	+1	known	nonsense	c.802	p.Q268*	1.000	superfamily_Isochorismatase-like	pfam_Isochorismatase-like,superfamily_Isochorismatase-like	-	no_errors	ISOC1	HGNC	ENSG00000066583	213	0	0.00	59	31	34.44	-	-	-
KCND1	0	genome.wustl.edu	37	X	48825777	48825777	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	X	48825777	48825777	C	G	SNP	KCND1	ENST00000218176	human	ensembl	69_37n	-1	known	missense	c.902	p.R301P	1.000	pfam_Ion_trans_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND1	HGNC	ENSG00000102057	130	0	0.00	82	13	13.68	-	-	-
LARP7	0	genome.wustl.edu	37	4	113567531	113567531	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	4	113567531	113567531	C	A	SNP	LARP7	ENST00000324052	human	ensembl	69_37n	+1	known	missense	c.227	p.S76Y	0.983	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd,prints_Lupus_La	pfam_RRM_3,pfam_Lupus_La_RNA-bd,pfam_RRM_dom,smart_Lupus_La_RNA-bd,smart_RRM_dom,pfscan_Lupus_La_RNA-bd,pfscan_RRM_dom,prints_Lupus_La	-	no_errors	LARP7	HGNC	ENSG00000174720	116	0	0.00	70	24	25.53	-	-	-
LRRC16B	0	genome.wustl.edu	37	14	24534915	24534915	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	14	24534915	24534915	G	A	SNP	LRRC16B	ENST00000342740	human	ensembl	69_37n	+1	known	missense	c.3481	p.G1161R	0.977	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	155	0	0.00	75	19	20.21	-	-	-
LRRC4C	0	genome.wustl.edu	37	11	40136678	40136678	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	11	40136678	40136678	G	C	SNP	LRRC4C	ENST00000527150	human	ensembl	69_37n	-1	known	missense	c.1165	p.P389A	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	LRRC4C	HGNC	ENSG00000148948	108	0	0.00	51	19	27.14	-	-	-
MAP3K12	0	genome.wustl.edu	37	12	53879958	53879958	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	12	53879958	53879958	G	-	DEL	MAP3K12	ENST00000267079	human	ensembl	69_37n	-1	known	frame_shift_del	c.604	p.L202fs	1.000	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K12	HGNC	ENSG00000139625	83	0	0.00	60	63	49.61	-	-	-
MLC1	0	genome.wustl.edu	37	22	50523318	50523319	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	22	50523318	50523319	-	A	INS	MLC1	ENST00000311597	human	ensembl	69_37n	-1	known	frame_shift_ins	c.14_13	p.P5fs	0.011:0.241	NULL	NULL	-	no_errors	MLC1	HGNC	ENSG00000100427	37	0	0.00	72	101	58.38	-	-	-
MUC21	0	genome.wustl.edu	37	6	30955398	30955398	+	Silent	SNP	C	C	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	6	30955398	30955398	C	A	SNP	MUC21	ENST00000376296	human	ensembl	69_37n	+1	known	silent	c.1446	p.L482	1.000	NULL	NULL	-	no_errors	MUC21	HGNC	ENSG00000204544	382	0	0.00	188	50	21.01	-	-	-
NIN	0	genome.wustl.edu	37	14	51228556	51228556	+	Missense_Mutation	SNP	T	T	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	14	51228556	51228556	T	C	SNP	NIN	ENST00000530997	human	ensembl	69_37n	-1	putative	missense	c.319	p.T107A	0.984	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	NIN	HGNC	ENSG00000100503	164	1	0.61	128	22	14.67	-	-	-
NIN	0	genome.wustl.edu	37	14	51238049	51238049	+	Splice_Site	SNP	C	C	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	14	51238049	51238049	C	A	SNP	NIN	ENST00000245441	human	ensembl	69_37n	-1	known	splice_site	c.1118+1	e8+1	1.000	-	-	-	no_errors	NIN	HGNC	ENSG00000100503	293	0	0.00	165	49	22.90	-	-	-
OBSL1	0	genome.wustl.edu	37	2	220432023	220432023	+	Silent	SNP	G	G	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	2	220432023	220432023	G	A	SNP	OBSL1	ENST00000404537	human	ensembl	69_37n	-1	known	silent	c.1809	p.H603	0.833	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	OBSL1	HGNC	ENSG00000124006	76	0	0.00	47	10	17.54	-	-	-
OXR1	0	genome.wustl.edu	37	8	107718659	107718659	+	Missense_Mutation	SNP	A	A	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	8	107718659	107718659	A	C	SNP	OXR1	ENST00000442977	human	ensembl	69_37n	+1	known	missense	c.913	p.T305P	0.104	NULL	pfam_TLDc,pfam_Peptidoglycan-bd_lysin,pfam_GRAM,smart_Peptidoglycan-bd_Lysin_subgr,smart_TLDc	-	no_errors	OXR1	HGNC	ENSG00000164830	77	0	0.00	63	23	26.74	-	-	-
PDE4C	0	genome.wustl.edu	37	19	18332958	18332958	+	Missense_Mutation	SNP	A	A	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	19	18332958	18332958	A	T	SNP	PDE4C	ENST00000355502	human	ensembl	69_37n	-1	known	missense	c.418	p.S140T	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4C	HGNC	ENSG00000105650	68	0	0.00	51	14	21.21	-	-	-
PEAR1	0	genome.wustl.edu	37	1	156874573	156874573	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	1	156874573	156874573	C	-	DEL	PEAR1	ENST00000292357	human	ensembl	69_37n	+1	known	frame_shift_del	c.135	p.F47fs	0.792	pfscan_EMI_domain	pfam_EGF_laminin,superfamily_Growth_fac_rcpt,smart_EGF-like,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	PEAR1	HGNC	ENSG00000187800	128	0	0.00	107	17	13.60	-	-	-
RPN1	0	genome.wustl.edu	37	3	128369504	128369505	+	Frame_Shift_Ins	INS	-	-	AA			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	3	128369504	128369505	-	AA	INS	RPN1	ENST00000296255	human	ensembl	69_37n	-1	known	frame_shift_ins	c.140_139	p.A47fs	1.000:1.000	pfam_Ribophorin_I	pfam_Ribophorin_I	-	no_errors	RPN1	HGNC	ENSG00000163902	19	0	0.00	24	9	27.27	-	-	-
RPN1	0	genome.wustl.edu	37	3	128369512	128369513	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	3	128369512	128369513	GC	-	DEL	RPN1	ENST00000296255	human	ensembl	69_37n	-1	known	frame_shift_del	c.132_131	p.S44fs	1.000:1.000	pfam_Ribophorin_I	pfam_Ribophorin_I	-	no_errors	RPN1	HGNC	ENSG00000163902	16	0	0.00	20	9	31.03	-	-	-
SOBP	0	genome.wustl.edu	37	6	107908293	107908293	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	6	107908293	107908293	G	T	SNP	SOBP	ENST00000317357	human	ensembl	69_37n	+1	known	nonsense	c.583	p.E195*	1.000	NULL	NULL	-	no_errors	SOBP	HGNC	ENSG00000112320	142	0	0.00	137	25	15.34	-	-	-
SON	0	genome.wustl.edu	37	21	34922545	34922545	+	Silent	SNP	G	G	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	21	34922545	34922545	G	T	SNP	SON	ENST00000356577	human	ensembl	69_37n	+1	known	silent	c.1008	p.A336	0.715	NULL	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_Ds-RNA-bd	-	no_errors	SON	HGNC	ENSG00000159140	82	0	0.00	30	11	26.19	-	-	-
SRBD1	0	genome.wustl.edu	37	2	45812872	45812872	+	Silent	SNP	G	G	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	2	45812872	45812872	G	A	SNP	SRBD1	ENST00000263736	human	ensembl	69_37n	-1	known	silent	c.690	p.A230	1.000	pfam_Tex-like_N	pfam_Tex-like_N,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_NA-bd_OB-fold-like,superfamily_RuvA_2-like,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SRBD1	HGNC	ENSG00000068784	191	0	0.00	83	22	20.95	-	-	-
STAB1	0	genome.wustl.edu	37	3	52544472	52544472	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	3	52544472	52544472	G	C	SNP	STAB1	ENST00000321725	human	ensembl	69_37n	+1	known	missense	c.2736	p.M912I	0.000	smart_EGF-like,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EGF-like,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	34	0	0.00	21	6	22.22	-	-	-
SUPT7L	0	genome.wustl.edu	37	2	27876562	27876562	+	Silent	SNP	C	C	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	2	27876562	27876562	C	T	SNP	SUPT7L	ENST00000337768	human	ensembl	69_37n	-1	known	silent	c.1035	p.E345	1.000	NULL	pfam_BTP,smart_BTP	-	no_errors	SUPT7L	HGNC	ENSG00000119760	334	0	0.00	208	68	24.64	-	-	-
SYNGR4	0	genome.wustl.edu	37	19	48879441	48879441	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	19	48879441	48879441	C	T	SNP	SYNGR4	ENST00000344846	human	ensembl	69_37n	+1	known	missense	c.571	p.P191S	0.998	pirsf_Synaptogyrin	pfam_MARVEL-like_dom,pirsf_Synaptogyrin	-	no_errors	SYNGR4	HGNC	ENSG00000105467	107	0	0.00	89	20	18.35	-	-	-
TMC6	0	genome.wustl.edu	37	17	76109253	76109253	+	Silent	SNP	C	C	T			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	17	76109253	76109253	C	T	SNP	TMC6	ENST00000322914	human	ensembl	69_37n	-1	known	silent	c.2394	p.L798	0.000	NULL	pfam_TMC	-	no_errors	TMC6	HGNC	ENSG00000141524	28	0	0.00	14	4	21.05	-	-	-
TP53	0	genome.wustl.edu	37	17	7579355	7579355	+	Missense_Mutation	SNP	A	A	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	17	7579355	7579355	A	G	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.332	p.L111P	0.684	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	142	0	0.00	118	43	26.54	-	-	-
TRPC4AP	0	genome.wustl.edu	37	20	33623023	33623023	+	Silent	SNP	G	G	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	20	33623023	33623023	G	A	SNP	TRPC4AP	ENST00000252015	human	ensembl	69_37n	-1	known	silent	c.954	p.F318	1.000	NULL	pfam_DUF3689	-	no_errors	TRPC4AP	HGNC	ENSG00000100991	155	0	0.00	63	11	14.86	-	-	-
TSR1	0	genome.wustl.edu	37	17	2236988	2236988	+	Missense_Mutation	SNP	T	T	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	17	2236988	2236988	T	C	SNP	TSR1	ENST00000301364	human	ensembl	69_37n	-1	known	missense	c.1004	p.D335G	0.001	NULL	pfam_BMS1_TSR1_C,pfam_AARP2CN,superfamily_Transl_elong_init/rib_B-barrel,smart_AARP2CN	-	no_errors	TSR1	HGNC	ENSG00000167721	120	0	0.00	102	16	13.56	-	-	-
UBA5	0	genome.wustl.edu	37	3	132379431	132379431	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	3	132379431	132379431	G	A	SNP	UBA5	ENST00000356232	human	ensembl	69_37n	+1	known	missense	c.50	p.R17Q	0.994	NULL	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB	-	no_errors	UBA5	HGNC	ENSG00000081307	59	0	0.00	33	10	23.26	-	-	-
USP42	0	genome.wustl.edu	37	7	6196533	6196533	+	Missense_Mutation	SNP	T	T	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	7	6196533	6196533	T	G	SNP	USP42	ENST00000306177	human	ensembl	69_37n	+1	known	missense	c.3790	p.L1264V	0.002	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP42	HGNC	ENSG00000106346	135	0	0.00	60	58	49.15	-	-	-
VILL	0	genome.wustl.edu	37	3	38039624	38039625	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	3	38039624	38039625	-	C	INS	VILL	ENST00000283713	human	ensembl	69_37n	+1	known	frame_shift_ins	c.808_809	p.L273fs	0.589:0.638	pfam_Gelsolin_dom,smart_Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Gelsolin	-	no_errors	VILL	HGNC	ENSG00000136059	116	1	0.85	33	4	10.81	-	-	-
XIRP2	0	genome.wustl.edu	37	2	168101657	168101657	+	Missense_Mutation	SNP	A	A	G			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	2	168101657	168101657	A	G	SNP	XIRP2	ENST00000295237	human	ensembl	69_37n	+1	known	missense	c.3755	p.K1252R	0.997	NULL	pfam_Actin-binding_Xin_repeat,superfamily_FH2_actin-bd	-	no_errors	XIRP2	HGNC	ENSG00000163092	391	0	0.00	296	66	18.13	-	-	-
ZNF518B	0	genome.wustl.edu	37	4	10447420	10447420	+	Missense_Mutation	SNP	T	T	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	4	10447420	10447420	T	A	SNP	ZNF518B	ENST00000326756	human	ensembl	69_37n	-1	known	missense	c.533	p.Q178L	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF518B	HGNC	ENSG00000178163	121	0	0.00	72	21	22.58	-	-	-
ZNF878	0	genome.wustl.edu	37	19	12154855	12154855	+	Missense_Mutation	SNP	T	T	A			TCGA-AQ-A04J-01A-02W-A050-09	TCGA-AQ-A04J-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cce21f2b-784b-4fa0-9809-ae532c528f8e	a53132c6-21f2-4083-9b0b-5e927d63e199	19	12154855	12154855	T	A	SNP	ZNF878	ENST00000547628	human	ensembl	69_37n	-1	novel	missense	c.1361	p.K454M	0.008	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF878	HGNC	ENSG00000257446	111	0	0.00	97	22	18.49	-	-	-
