Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
CEP63	0	genome.wustl.edu	37	3	134266281	134266281	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	3	134266281	134266281	T	G	SNP	CEP63	ENST00000337090	human	ensembl	69_37n	+1	known	missense	c.1034	p.L345R	0.880	NULL	NULL	-	no_errors	CEP63	HGNC	ENSG00000182923	57	0	0.00	46	11	19.30	-	-	-
COL5A1	0	genome.wustl.edu	37	9	137622088	137622088	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	9	137622088	137622088	A	T	SNP	COL5A1	ENST00000371817	human	ensembl	69_37n	+1	known	missense	c.931	p.T311S	0.713	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635	19	0	0.00	11	7	38.89	-	-	-
CROCC	0	genome.wustl.edu	37	1	17266536	17266536	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	1	17266536	17266536	G	C	SNP	CROCC	ENST00000375541	human	ensembl	69_37n	+1	known	missense	c.1756	p.D586H	1.000	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453	13	0	0.00	11	7	38.89	-	-	-
ECE2	0	genome.wustl.edu	37	3	183994997	183995000	+	Frame_Shift_Del	DEL	GACT	GACT	-			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	GACT	GACT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	3	183994997	183995000	GACT	-	DEL	ECE2	ENST00000422932	human	ensembl	69_37n	+1	known	frame_shift_del	c.199_202	p.D67fs	0.000:0.000:0.000:0.008	NULL	NULL	-	no_errors	ECE2	HGNC	ENSG00000145194	36	0	0.00	30	9	23.08	-	-	-
KHK	0	genome.wustl.edu	37	2	27320515	27320515	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	2	27320515	27320515	G	T	SNP	KHK	ENST00000260598	human	ensembl	69_37n	+1	known	missense	c.562	p.V188L	1.000	pfam_PfkB	pfam_PfkB	-	no_errors	KHK	HGNC	ENSG00000138030	34	0	0.00	22	5	18.52	-	-	-
KIF16B	0	genome.wustl.edu	37	20	16359706	16359706	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	20	16359706	16359706	G	C	SNP	KIF16B	ENST00000408042	human	ensembl	69_37n	-1	known	missense	c.2941	p.R981G	0.983	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF16B	HGNC	ENSG00000089177	99	0	0.00	101	27	21.09	-	-	-
NEU4	0	genome.wustl.edu	37	2	242757547	242757547	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	2	242757547	242757547	C	T	SNP	NEU4	ENST00000325935	human	ensembl	69_37n	+1	known	missense	c.667	p.R223C	0.989	superfamily_Neuraminidase	superfamily_Neuraminidase	-	no_errors	NEU4	HGNC	ENSG00000204099	17	0	0.00	28	8	22.22	-	-	-
RB1CC1	0	genome.wustl.edu	37	8	53588958	53588958	+	Silent	SNP	G	G	T			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	8	53588958	53588958	G	T	SNP	RB1CC1	ENST00000025008	human	ensembl	69_37n	-1	known	silent	c.543	p.S181	0.995	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287	37	0	0.00	40	6	13.04	-	-	-
ROBO4	0	genome.wustl.edu	37	11	124764141	124764141	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	11	124764141	124764141	C	A	SNP	ROBO4	ENST00000306534	human	ensembl	69_37n	-1	known	missense	c.1274	p.G425V	0.561	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	ROBO4	HGNC	ENSG00000154133	38	0	0.00	28	9	24.32	-	-	-
RYR2	0	genome.wustl.edu	37	1	237897046	237897046	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	1	237897046	237897046	T	A	SNP	RYR2	ENST00000360064	human	ensembl	69_37n	+1	known	missense	c.11075	p.I3692N	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	71	0	0.00	135	21	13.46	-	-	-
TRPM5	0	genome.wustl.edu	37	11	2434365	2434365	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	11	2434365	2434365	G	A	SNP	TRPM5	ENST00000452833	human	ensembl	69_37n	-1	known	missense	c.2101	p.R701W	0.001	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	TRPM5	HGNC	ENSG00000070985	27	0	0.00	9	5	35.71	-	-	-
ZXDB	0	genome.wustl.edu	37	X	57620700	57620700	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LO-01A-31D-A18P-09	TCGA-AR-A2LO-10A-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c65887cd-2df3-46ac-9787-f1ad62279055	67693f81-bf05-4221-ba0b-3a4ce2217bf3	X	57620700	57620700	C	T	SNP	ZXDB	ENST00000374888	human	ensembl	69_37n	+1	known	missense	c.2219	p.S740L	0.955	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDB	HGNC	ENSG00000198455	88	0	0.00	61	25	29.07	-	-	-
