Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
CNTLN	0	genome.wustl.edu	37	9	17486986	17486986	+	Splice_Site	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	9	17486986	17486986	G	A	SNP	CNTLN	ENST00000380647	human	ensembl	69_37n	+1	known	splice_site	c.4042-1	e25-1	1.000	-	-	-	no_errors	CNTLN	HGNC	ENSG00000044459	125	0	0.00	88	26	22.81	-	-	-
CNTLN	0	genome.wustl.edu	37	9	17486986	17486986	+	Splice_Site	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	9	17486986	17486986	G	A	SNP	CNTLN	ENST00000380647	human	ensembl	69_37n	+1	known	splice_site	c.4042-1	e25-1	1.000	-	-	-	no_errors	CNTLN	HGNC	ENSG00000044459	164	0	0.00	88	26	22.81	-	-	-
DCAF5	0	genome.wustl.edu	37	14	69520662	69520662	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	14	69520662	69520662	T	A	SNP	DCAF5	ENST00000341516	human	ensembl	69_37n	-1	known	missense	c.2741	p.H914L	0.992	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF5	HGNC	ENSG00000139990	40	0	0.00	124	44	26.19	-	-	-
DCAF5	0	genome.wustl.edu	37	14	69520662	69520662	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	14	69520662	69520662	T	A	SNP	DCAF5	ENST00000341516	human	ensembl	69_37n	-1	known	missense	c.2741	p.H914L	0.992	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF5	HGNC	ENSG00000139990	64	0	0.00	124	44	26.19	-	-	-
DCUN1D2	0	genome.wustl.edu	37	13	114138226	114138226	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	13	114138226	114138226	G	A	SNP	DCUN1D2	ENST00000478244	human	ensembl	69_37n	-1	known	missense	c.149	p.S50L	0.975	NULL	pfam_PONY_dom,superfamily_UBA-like	-	no_errors	DCUN1D2	HGNC	ENSG00000150401	26	0	0.00	61	11	15.28	-	-	-
DCUN1D2	0	genome.wustl.edu	37	13	114138226	114138226	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	13	114138226	114138226	G	A	SNP	DCUN1D2	ENST00000478244	human	ensembl	69_37n	-1	known	missense	c.149	p.S50L	0.975	NULL	pfam_PONY_dom,superfamily_UBA-like	-	no_errors	DCUN1D2	HGNC	ENSG00000150401	38	0	0.00	61	11	15.28	-	-	-
DDB1	0	genome.wustl.edu	37	11	61093120	61093120	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	61093120	61093120	C	T	SNP	DDB1	ENST00000301764	human	ensembl	69_37n	-1	known	missense	c.725	p.G242D	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	DDB1	HGNC	ENSG00000167986	62	0	0.00	101	65	39.16	-	-	-
DDB1	0	genome.wustl.edu	37	11	61093120	61093120	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	61093120	61093120	C	T	SNP	DDB1	ENST00000301764	human	ensembl	69_37n	-1	known	missense	c.725	p.G242D	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	DDB1	HGNC	ENSG00000167986	88	0	0.00	101	65	39.16	-	-	-
DMKN	0	genome.wustl.edu	37	19	35999142	35999142	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	19	35999142	35999142	C	T	SNP	DMKN	ENST00000419602	human	ensembl	69_37n	-1	known	missense	c.856	p.G286S	0.003	NULL	NULL	-	no_errors	DMKN	HGNC	ENSG00000161249	73	0	0.00	118	43	26.71	-	-	-
ENSG00000210191	0	genome.wustl.edu	37	MT	12327	12327	+	RNA	SNP	A	A	G			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	MT	12327	12327	A	G	SNP	ENSG00000210191	ENST00000387456	human	ensembl	69_37n	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	J01415.20	Clone_based_ensembl_gene	ENSG00000210191	19	0	0.00	4	2	33.33	-	-	-
EP400	0	genome.wustl.edu	37	12	132498069	132498069	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	12	132498069	132498069	C	T	SNP	EP400	ENST00000333577	human	ensembl	69_37n	+1	known	missense	c.3754	p.H1252Y	1.000	pfam_SNF2_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495	30	0	0.00	60	31	34.07	-	-	-
EP400	0	genome.wustl.edu	37	12	132498069	132498069	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	12	132498069	132498069	C	T	SNP	EP400	ENST00000333577	human	ensembl	69_37n	+1	known	missense	c.3754	p.H1252Y	1.000	pfam_SNF2_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495	34	0	0.00	60	31	34.07	-	-	-
FAIM3	0	genome.wustl.edu	37	1	207086340	207086341	+	Frame_Shift_Ins	INS	-	-	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	207086340	207086341	-	T	INS	FAIM3	ENST00000367091	human	ensembl	69_37n	-1	known	frame_shift_ins	c.421_420	p.W140fs	0.272:0.014	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	FAIM3	HGNC	ENSG00000162894	102	0	0.00	90	80	47.06	-	-	-
FAIM3	0	genome.wustl.edu	37	1	207086340	207086341	+	Frame_Shift_Ins	INS	-	-	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	207086340	207086341	-	T	INS	FAIM3	ENST00000367091	human	ensembl	69_37n	-1	known	frame_shift_ins	c.421_420	p.W140fs	0.272:0.014	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	FAIM3	HGNC	ENSG00000162894	68	0	0.00	90	80	47.06	-	-	-
FCGBP	0	genome.wustl.edu	37	19	40368619	40368619	+	Silent	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	19	40368619	40368619	G	A	SNP	FCGBP	ENST00000221347	human	ensembl	69_37n	-1	known	silent	c.12729	p.G4243	0.496	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	46	0	0.00	241	32	11.72	-	-	-
FHAD1	0	genome.wustl.edu	37	1	15708607	15708607	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	15708607	15708607	C	T	SNP	FHAD1	ENST00000375999	human	ensembl	69_37n	+1	known	missense	c.4040	p.A1347V	0.999	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	FHAD1	HGNC	ENSG00000142621	13	0	0.00	35	55	61.11	-	-	-
FHAD1	0	genome.wustl.edu	37	1	15708607	15708607	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	15708607	15708607	C	T	SNP	FHAD1	ENST00000375999	human	ensembl	69_37n	+1	known	missense	c.4040	p.A1347V	0.999	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	FHAD1	HGNC	ENSG00000142621	20	0	0.00	35	55	61.11	-	-	-
FOLR4	0	genome.wustl.edu	37	11	94040778	94040788	+	Frame_Shift_Del	DEL	CTCTTCGCCAG	CTCTTCGCCAG	-			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	CTCTTCGCCAG	CTCTTCGCCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	94040778	94040788	CTCTTCGCCAG	-	DEL	FOLR4	ENST00000440961	human	ensembl	69_37n	+1	novel	frame_shift_del	c.652_662	p.F219fs	0.003:0.002:0.014:0.018:0.012:0.007:0.288:0.315:0.009:0.006:0.000	NULL	pfam_Folate_rcpt-like	-	no_errors	FOLR4	HGNC	ENSG00000183560	26	0	0.00	78	9	10.34	-	-	-
FOLR4	0	genome.wustl.edu	37	11	94040778	94040788	+	Frame_Shift_Del	DEL	CTCTTCGCCAG	CTCTTCGCCAG	-			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	CTCTTCGCCAG	CTCTTCGCCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	94040778	94040788	CTCTTCGCCAG	-	DEL	FOLR4	ENST00000440961	human	ensembl	69_37n	+1	novel	frame_shift_del	c.652_662	p.F219fs	0.003:0.002:0.014:0.018:0.012:0.007:0.288:0.315:0.009:0.006:0.000	NULL	pfam_Folate_rcpt-like	-	no_errors	FOLR4	HGNC	ENSG00000183560	35	0	0.00	78	9	10.34	-	-	-
GIMAP8	0	genome.wustl.edu	37	7	150171600	150171634	+	Frame_Shift_Del	DEL	AGATATAGTGCCTTCAACTACCGGGCAACAGGAGA	AGATATAGTGCCTTCAACTACCGGGCAACAGGAGA	-			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	AGATATAGTGCCTTCAACTACCGGGCAACAGGAGA	AGATATAGTGCCTTCAACTACCGGGCAACAGGAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	7	150171600	150171634	AGATATAGTGCCTTCAACTACCGGGCAACAGGAGA	-	DEL	GIMAP8	ENST00000307271	human	ensembl	69_37n	+1	known	frame_shift_del	c.1183_1217	p.Y396fs	0.000:0.004:0.000:0.016:0.012:0.003:0.000:0.000:0.000:0.000:0.001:0.464:0.880:0.952:0.961:0.967:0.968:0.973:0.969:0.901:0.861:0.133:0.001:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000	pfam_AIG1	pfam_AIG1	-	no_errors	GIMAP8	HGNC	ENSG00000171115	38	0	0.00	97	13	11.82	-	-	-
GRHL2	0	genome.wustl.edu	37	8	102570699	102570699	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	8	102570699	102570699	C	T	SNP	GRHL2	ENST00000251808	human	ensembl	69_37n	+1	known	nonsense	c.337	p.R113*	1.000	NULL	pfam_CP2	-	no_errors	GRHL2	HGNC	ENSG00000083307	56	0	0.00	99	38	27.74	-	-	-
GRHL2	0	genome.wustl.edu	37	8	102570699	102570699	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	8	102570699	102570699	C	T	SNP	GRHL2	ENST00000251808	human	ensembl	69_37n	+1	known	nonsense	c.337	p.R113*	1.000	NULL	pfam_CP2	-	no_errors	GRHL2	HGNC	ENSG00000083307	86	0	0.00	99	38	27.74	-	-	-
HSDL2	0	genome.wustl.edu	37	9	115167969	115167969	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	9	115167969	115167969	G	C	SNP	HSDL2	ENST00000398805	human	ensembl	69_37n	+1	known	missense	c.247	p.A83P	0.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_SCP2_sterol-bd_dom,pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,prints_Glc/ribitol_DH	-	no_errors	HSDL2	HGNC	ENSG00000119471	132	0	0.00	85	26	23.42	-	-	-
HSDL2	0	genome.wustl.edu	37	9	115167969	115167969	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	9	115167969	115167969	G	C	SNP	HSDL2	ENST00000398805	human	ensembl	69_37n	+1	known	missense	c.247	p.A83P	0.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_SCP2_sterol-bd_dom,pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,prints_Glc/ribitol_DH	-	no_errors	HSDL2	HGNC	ENSG00000119471	94	0	0.00	85	26	23.42	-	-	-
LGI2	0	genome.wustl.edu	37	4	25005663	25005663	+	Silent	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	4	25005663	25005663	G	A	SNP	LGI2	ENST00000382114	human	ensembl	69_37n	-1	known	silent	c.1048	p.L350	0.488	pfam_EPTP,pfscan_EAR	pfam_EPTP,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI2	HGNC	ENSG00000153012	61	0	0.00	135	37	21.51	-	-	-
LGI2	0	genome.wustl.edu	37	4	25005663	25005663	+	Silent	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	4	25005663	25005663	G	A	SNP	LGI2	ENST00000382114	human	ensembl	69_37n	-1	known	silent	c.1048	p.L350	0.488	pfam_EPTP,pfscan_EAR	pfam_EPTP,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI2	HGNC	ENSG00000153012	82	0	0.00	135	37	21.51	-	-	-
LSM11	0	genome.wustl.edu	37	5	157178496	157178496	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	5	157178496	157178496	T	C	SNP	LSM11	ENST00000286307	human	ensembl	69_37n	+1	known	missense	c.547	p.C183R	1.000	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	-	no_errors	LSM11	HGNC	ENSG00000155858	60	0	0.00	73	48	39.34	-	-	-
LSM11	0	genome.wustl.edu	37	5	157178496	157178496	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	5	157178496	157178496	T	C	SNP	LSM11	ENST00000286307	human	ensembl	69_37n	+1	known	missense	c.547	p.C183R	1.000	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	-	no_errors	LSM11	HGNC	ENSG00000155858	76	0	0.00	73	48	39.34	-	-	-
MIR410	0	genome.wustl.edu	37	14	101532265	101532265	+	RNA	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	14	101532265	101532265	T	A	SNP	MIR410	ENST00000362222	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR410	HGNC	ENSG00000199092	63	0	0.00	113	42	26.75	-	-	-
MIR410	0	genome.wustl.edu	37	14	101532265	101532265	+	RNA	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	14	101532265	101532265	T	A	SNP	MIR410	ENST00000362222	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR410	HGNC	ENSG00000199092	82	0	0.00	113	42	26.75	-	-	-
MT-CYB	0	genome.wustl.edu	37	MT	14934	14934	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	MT	14934	14934	T	C	SNP	MT-CYB	ENST00000361789	human	ensembl	69_37n	+1	known	missense	c.188	p.F63S	NULL	pfam_Di-haem_cyt_TM,superfamily_Di-haem_cyt_TM,pfscan_Cyt_b/b6_N	pfam_Cyt_b/b6_C,pfam_Di-haem_cyt_TM,superfamily_Di-haem_cyt_TM,superfamily_Cyt_b/b6_C,pfscan_Cyt_b/b6_N,pfscan_Cyt_b/b6_C	-	no_stop_codon:bad_bp_length_for_coding_region	MT-CYB	HGNC	ENSG00000198727	120	0	0.00	43	8	15.69	-	-	-
MT-CYB	0	genome.wustl.edu	37	MT	14934	14934	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	MT	14934	14934	T	C	SNP	MT-CYB	ENST00000361789	human	ensembl	69_37n	+1	known	missense	c.188	p.F63S	NULL	pfam_Di-haem_cyt_TM,superfamily_Di-haem_cyt_TM,pfscan_Cyt_b/b6_N	pfam_Cyt_b/b6_C,pfam_Di-haem_cyt_TM,superfamily_Di-haem_cyt_TM,superfamily_Cyt_b/b6_C,pfscan_Cyt_b/b6_N,pfscan_Cyt_b/b6_C	-	no_stop_codon:bad_bp_length_for_coding_region	MT-CYB	HGNC	ENSG00000198727	89	0	0.00	43	8	15.69	-	-	-
MT-ND1	0	genome.wustl.edu	37	MT	4100	4100	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	MT	4100	4100	T	C	SNP	MT-ND1	ENST00000361390	human	ensembl	69_37n	+1	known	missense	c.794	p.L265P	NULL	pfam_NADH_UbQ_OxRdtase_su1/FPO	pfam_NADH_UbQ_OxRdtase_su1/FPO	-	no_stop_codon	MT-ND1	HGNC	ENSG00000198888	10	0	0.00	3	3	50.00	-	-	-
MT-ND1	0	genome.wustl.edu	37	MT	4100	4100	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	MT	4100	4100	T	C	SNP	MT-ND1	ENST00000361390	human	ensembl	69_37n	+1	known	missense	c.794	p.L265P	NULL	pfam_NADH_UbQ_OxRdtase_su1/FPO	pfam_NADH_UbQ_OxRdtase_su1/FPO	-	no_stop_codon	MT-ND1	HGNC	ENSG00000198888	15	0	0.00	3	3	50.00	-	-	-
NCOR1	0	genome.wustl.edu	37	17	15983302	15983302	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	17	15983302	15983302	T	A	SNP	NCOR1	ENST00000395849	human	ensembl	69_37n	-1	novel	missense	c.20	p.H7L	0.525	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	NCOR1	HGNC	ENSG00000141027	131	0	0.00	159	40	20.10	-	-	-
NCOR1	0	genome.wustl.edu	37	17	15983302	15983302	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	17	15983302	15983302	T	A	SNP	NCOR1	ENST00000395849	human	ensembl	69_37n	-1	novel	missense	c.20	p.H7L	0.525	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	NCOR1	HGNC	ENSG00000141027	176	0	0.00	159	40	20.10	-	-	-
OR2C3	0	genome.wustl.edu	37	1	247695646	247695646	+	Silent	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	247695646	247695646	G	A	SNP	OR2C3	ENST00000366487	human	ensembl	69_37n	-1	known	silent	c.168	p.L56	0.999	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2C3	HGNC	ENSG00000196242	76	0	0.00	104	109	51.17	-	-	-
OR2C3	0	genome.wustl.edu	37	1	247695646	247695646	+	Silent	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	247695646	247695646	G	A	SNP	OR2C3	ENST00000366487	human	ensembl	69_37n	-1	known	silent	c.168	p.L56	0.999	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2C3	HGNC	ENSG00000196242	97	0	0.00	104	109	51.17	-	-	-
OR4A15	0	genome.wustl.edu	37	11	55136222	55136222	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	55136222	55136222	G	T	SNP	OR4A15	ENST00000314706	human	ensembl	69_37n	+1	known	missense	c.863	p.R288M	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR4A15	HGNC	ENSG00000181958	301	0	0.00	218	49	18.35	-	-	-
OR4A15	0	genome.wustl.edu	37	11	55136222	55136222	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	55136222	55136222	G	T	SNP	OR4A15	ENST00000314706	human	ensembl	69_37n	+1	known	missense	c.863	p.R288M	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR4A15	HGNC	ENSG00000181958	384	0	0.00	218	49	18.35	-	-	-
OR4D10	0	genome.wustl.edu	37	11	59245446	59245446	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	59245446	59245446	C	T	SNP	OR4D10	ENST00000530162	human	ensembl	69_37n	+1	known	missense	c.544	p.H182Y	0.587	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4D10	HGNC	ENSG00000254466	65	0	0.00	59	50	45.87	-	-	-
OR4D10	0	genome.wustl.edu	37	11	59245446	59245446	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	59245446	59245446	C	T	SNP	OR4D10	ENST00000530162	human	ensembl	69_37n	+1	known	missense	c.544	p.H182Y	0.587	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4D10	HGNC	ENSG00000254466	95	0	0.00	59	50	45.87	-	-	-
P2RY1	0	genome.wustl.edu	37	3	152554206	152554206	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	152554206	152554206	G	A	SNP	P2RY1	ENST00000305097	human	ensembl	69_37n	+1	known	missense	c.635	p.R212Q	0.999	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_P2Y_purnocptor,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	P2RY1	HGNC	ENSG00000169860	118	0	0.00	136	34	20.00	-	-	-
P2RY1	0	genome.wustl.edu	37	3	152554206	152554206	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	152554206	152554206	G	A	SNP	P2RY1	ENST00000305097	human	ensembl	69_37n	+1	known	missense	c.635	p.R212Q	0.999	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_P2Y_purnocptor,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	P2RY1	HGNC	ENSG00000169860	83	0	0.00	136	34	20.00	-	-	-
PCED1B	0	genome.wustl.edu	37	12	47629963	47629963	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	12	47629963	47629963	T	A	SNP	PCED1B	ENST00000432328	human	ensembl	69_37n	+1	known	missense	c.1117	p.F373I	0.023	NULL	superfamily_Esterase_SGNH_hydro-type	-	no_errors	PCED1B	HGNC	ENSG00000179715	103	0	0.00	93	17	15.45	-	-	-
PCED1B	0	genome.wustl.edu	37	12	47629963	47629963	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	12	47629963	47629963	T	A	SNP	PCED1B	ENST00000432328	human	ensembl	69_37n	+1	known	missense	c.1117	p.F373I	0.023	NULL	superfamily_Esterase_SGNH_hydro-type	-	no_errors	PCED1B	HGNC	ENSG00000179715	77	0	0.00	93	17	15.45	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936074	178936074	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	178936074	178936074	C	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1616	p.P539R	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	126	0	0.00	98	75	43.10	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936074	178936074	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	178936074	178936074	C	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1616	p.P539R	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	156	0	0.00	98	75	43.10	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	100	0	0.00	60	25	29.41	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	82	0	0.00	60	25	29.41	-	-	-
RARS	0	genome.wustl.edu	37	5	167927622	167927622	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	5	167927622	167927622	G	C	SNP	RARS	ENST00000231572	human	ensembl	69_37n	+1	known	missense	c.849	p.E283D	0.969	pfam_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-synth_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,pfam_Arg-tRNA-synth_N,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-synth_Ia	-	no_errors	RARS	HGNC	ENSG00000113643	144	0	0.00	113	63	35.59	-	-	-
RARS	0	genome.wustl.edu	37	5	167927622	167927622	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	5	167927622	167927622	G	C	SNP	RARS	ENST00000231572	human	ensembl	69_37n	+1	known	missense	c.849	p.E283D	0.969	pfam_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-synth_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,pfam_Arg-tRNA-synth_N,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-synth_Ia	-	no_errors	RARS	HGNC	ENSG00000113643	196	0	0.00	113	63	35.59	-	-	-
RHAG	0	genome.wustl.edu	37	6	49580246	49580246	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	6	49580246	49580246	A	G	SNP	RHAG	ENST00000371175	human	ensembl	69_37n	-1	known	missense	c.809	p.V270A	1.000	pfam_NH4_transpt_AmtB-like,superfamily_NH4_transpt_AmtB-like	pfam_NH4_transpt_AmtB-like,superfamily_NH4_transpt_AmtB-like,prints_RhesusRHD	-	no_errors	RHAG	HGNC	ENSG00000112077	32	0	0.00	35	25	41.67	-	-	-
RHAG	0	genome.wustl.edu	37	6	49580246	49580246	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	6	49580246	49580246	A	G	SNP	RHAG	ENST00000371175	human	ensembl	69_37n	-1	known	missense	c.809	p.V270A	1.000	pfam_NH4_transpt_AmtB-like,superfamily_NH4_transpt_AmtB-like	pfam_NH4_transpt_AmtB-like,superfamily_NH4_transpt_AmtB-like,prints_RhesusRHD	-	no_errors	RHAG	HGNC	ENSG00000112077	54	0	0.00	35	25	41.67	-	-	-
RNLS	0	genome.wustl.edu	37	10	90332770	90332772	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	10	90332770	90332772	TCT	-	DEL	RNLS	ENST00000331772	human	ensembl	69_37n	-1	known	in_frame_del	c.416_414	p.RD138in_frame_delS	0.035:0.010:0.007	pfam_Amino_oxidase	pfam_Amino_oxidase	-	no_errors	RNLS	HGNC	ENSG00000184719	114	0	0.00	176	33	15.64	-	-	-
RNLS	0	genome.wustl.edu	37	10	90332770	90332772	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	10	90332770	90332772	TCT	-	DEL	RNLS	ENST00000331772	human	ensembl	69_37n	-1	known	in_frame_del	c.416_414	p.RD138in_frame_delS	0.035:0.010:0.007	pfam_Amino_oxidase	pfam_Amino_oxidase	-	no_errors	RNLS	HGNC	ENSG00000184719	83	0	0.00	176	33	15.64	-	-	-
SERPINE3	0	genome.wustl.edu	37	13	51922387	51922387	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	13	51922387	51922387	C	A	SNP	SERPINE3	ENST00000521255	human	ensembl	69_37n	+1	known	missense	c.739	p.L247M	0.996	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINE3	HGNC	ENSG00000253309	28	0	0.00	134	28	17.28	-	-	-
SERPINE3	0	genome.wustl.edu	37	13	51922387	51922387	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	13	51922387	51922387	C	A	SNP	SERPINE3	ENST00000521255	human	ensembl	69_37n	+1	known	missense	c.739	p.L247M	0.996	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINE3	HGNC	ENSG00000253309	41	0	0.00	134	28	17.28	-	-	-
SORCS3	0	genome.wustl.edu	37	10	106974227	106974227	+	Silent	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	10	106974227	106974227	C	T	SNP	SORCS3	ENST00000369701	human	ensembl	69_37n	+1	known	silent	c.2403	p.C801	1.000	superfamily_PKD_dom,smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	49	0	0.00	83	18	17.82	-	-	-
SORCS3	0	genome.wustl.edu	37	10	106974227	106974227	+	Silent	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	10	106974227	106974227	C	T	SNP	SORCS3	ENST00000369701	human	ensembl	69_37n	+1	known	silent	c.2403	p.C801	1.000	superfamily_PKD_dom,smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	61	0	0.00	83	18	17.82	-	-	-
SPEN	0	genome.wustl.edu	37	1	16257012	16257012	+	Nonsense_Mutation	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	16257012	16257012	T	A	SNP	SPEN	ENST00000375759	human	ensembl	69_37n	+1	known	nonsense	c.4277	p.L1426*	1.000	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526	62	0	0.00	37	86	69.92	-	-	-
SPEN	0	genome.wustl.edu	37	1	16257012	16257012	+	Nonsense_Mutation	SNP	T	T	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	16257012	16257012	T	A	SNP	SPEN	ENST00000375759	human	ensembl	69_37n	+1	known	nonsense	c.4277	p.L1426*	1.000	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526	80	0	0.00	37	86	69.92	-	-	-
TMEM151B	0	genome.wustl.edu	37	6	44241139	44241139	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	6	44241139	44241139	C	T	SNP	TMEM151B	ENST00000451188	human	ensembl	69_37n	+1	known	nonsense	c.472	p.Q158*	1.000	NULL	NULL	-	no_errors	TMEM151B	HGNC	ENSG00000178233	17	0	0.00	53	13	19.70	-	-	-
TMEM151B	0	genome.wustl.edu	37	6	44241139	44241139	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	6	44241139	44241139	C	T	SNP	TMEM151B	ENST00000451188	human	ensembl	69_37n	+1	known	nonsense	c.472	p.Q158*	1.000	NULL	NULL	-	no_errors	TMEM151B	HGNC	ENSG00000178233	19	0	0.00	53	13	19.70	-	-	-
TTN	0	genome.wustl.edu	37	2	179585182	179585182	+	Silent	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	2	179585182	179585182	G	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	silent	c.19575	p.V6525	0.069	pfam_Ig_I-set,pfam_Ig_V-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	170	0	0.00	160	52	24.41	-	-	-
TTN	0	genome.wustl.edu	37	2	179585182	179585182	+	Silent	SNP	G	G	A			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	2	179585182	179585182	G	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	silent	c.19575	p.V6525	0.069	pfam_Ig_I-set,pfam_Ig_V-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	226	0	0.00	160	52	24.41	-	-	-
UBE2E3	0	genome.wustl.edu	37	2	181925537	181925537	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	2	181925537	181925537	C	T	SNP	UBE2E3	ENST00000392415	human	ensembl	69_37n	+1	known	missense	c.524	p.P175L	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2E3	HGNC	ENSG00000170035	147	0	0.00	164	41	20.00	-	-	-
UBE2E3	0	genome.wustl.edu	37	2	181925537	181925537	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	2	181925537	181925537	C	T	SNP	UBE2E3	ENST00000392415	human	ensembl	69_37n	+1	known	missense	c.524	p.P175L	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2E3	HGNC	ENSG00000170035	194	1	0.51	164	41	20.00	-	-	-
ZNF658	0	genome.wustl.edu	37	9	40775035	40775035	+	Silent	SNP	C	C	T			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	9	40775035	40775035	C	T	SNP	ZNF658	ENST00000377626	human	ensembl	69_37n	-1	known	silent	c.240	p.G80	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF658	HGNC	ENSG00000196409	25	0	0.00	16	3	15.79	-	-	-
