Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ARHGEF9	0	genome.wustl.edu	37	X	62894024	62894024	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	X	62894024	62894024	G	A	SNP	ARHGEF9	ENST00000253401	human	ensembl	69_37n	-1	known	missense	c.818	p.A273V	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_SH3_domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF9	HGNC	ENSG00000131089	31	0	0.00	35	24	40.68	-	-	-
BCOR	0	genome.wustl.edu	37	X	39937175	39937175	+	Nonsense_Mutation	SNP	G	G	C			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	X	39937175	39937175	G	C	SNP	BCOR	ENST00000378444	human	ensembl	69_37n	-1	known	nonsense	c.8	p.S3*	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337	35	0	0.00	21	13	38.24	-	-	-
CACNA1H	0	genome.wustl.edu	37	16	1251677	1251677	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	16	1251677	1251677	C	A	SNP	CACNA1H	ENST00000348261	human	ensembl	69_37n	+1	known	missense	c.1227	p.F409L	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557	25	0	0.00	35	4	10.26	-	-	-
CKS1B	0	genome.wustl.edu	37	1	154950513	154950513	+	Missense_Mutation	SNP	T	T	G			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	1	154950513	154950513	T	G	SNP	CKS1B	ENST00000308987	human	ensembl	69_37n	+1	known	missense	c.110	p.L37R	1.000	pfam_Cyclin-dep_kinase_reg-sub,superfamily_Cyclin-dep_kinase_reg-sub	pfam_Cyclin-dep_kinase_reg-sub,superfamily_Cyclin-dep_kinase_reg-sub,prints_Cyclin-dep_kinase_reg-sub	-	no_errors	CKS1B	HGNC	ENSG00000173207	118	0	0.00	170	32	15.84	-	-	-
COG3	0	genome.wustl.edu	37	13	46065553	46065553	+	Silent	SNP	A	A	G			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	13	46065553	46065553	A	G	SNP	COG3	ENST00000349995	human	ensembl	69_37n	+1	known	silent	c.975	p.Q325	0.888	NULL	pfam_COG_su3,superfamily_Cullin_repeat-like_dom	-	no_errors	COG3	HGNC	ENSG00000136152	88	0	0.00	46	22	32.35	-	-	-
CUBN	0	genome.wustl.edu	37	10	16960643	16960643	+	Silent	SNP	T	T	C			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	10	16960643	16960643	T	C	SNP	CUBN	ENST00000377833	human	ensembl	69_37n	-1	known	silent	c.6978	p.G2326	0.842	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_CUB,superfamily_Growth_fac_rcpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_CUB,pfscan_CUB,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	32	0	0.00	28	20	41.67	-	-	-
CXorf40B	0	genome.wustl.edu	37	X	149100974	149100974	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	X	149100974	149100974	T	A	SNP	CXorf40B	ENST00000355203	human	ensembl	69_37n	-1	known	missense	c.265	p.I89F	0.990	superfamily_PUA-like_domain	superfamily_PUA-like_domain	-	no_errors	CXorf40B	HGNC	ENSG00000197021	62	0	0.00	46	16	25.81	-	-	-
DYTN	0	genome.wustl.edu	37	2	207530593	207530593	+	Splice_Site	SNP	C	C	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	2	207530593	207530593	C	A	SNP	DYTN	ENST00000452335	human	ensembl	69_37n	-1	known	splice_site	c.1140+1	e10+1	1.000	-	-	-	no_errors	DYTN	HGNC	ENSG00000232125	77	0	0.00	91	20	18.02	-	-	-
EFNA1	0	genome.wustl.edu	37	1	155103837	155103837	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	1	155103837	155103837	A	G	SNP	EFNA1	ENST00000368407	human	ensembl	69_37n	+1	known	missense	c.115	p.I39V	0.843	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	-	no_errors	EFNA1	HGNC	ENSG00000169242	27	0	0.00	39	6	13.33	-	-	-
F13A1	0	genome.wustl.edu	37	6	6182294	6182294	+	Silent	SNP	C	C	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	6	6182294	6182294	C	A	SNP	F13A1	ENST00000264870	human	ensembl	69_37n	-1	known	silent	c.1386	p.G462	0.998	NULL	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	F13A1	HGNC	ENSG00000124491	45	0	0.00	51	24	32.00	-	-	-
FGD6	0	genome.wustl.edu	37	12	95602823	95602823	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	12	95602823	95602823	G	A	SNP	FGD6	ENST00000343958	human	ensembl	69_37n	-1	known	missense	c.2237	p.P746L	0.981	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD6	HGNC	ENSG00000180263	32	0	0.00	25	9	26.47	-	-	-
FLNC	0	genome.wustl.edu	37	7	128495365	128495365	+	Silent	SNP	C	C	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	7	128495365	128495365	C	T	SNP	FLNC	ENST00000325888	human	ensembl	69_37n	+1	known	silent	c.7248	p.L2416	0.998	superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	24	0	0.00	25	6	19.35	-	-	-
FRMD3	0	genome.wustl.edu	37	9	85881994	85881994	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	9	85881994	85881994	G	C	SNP	FRMD3	ENST00000328788	human	ensembl	69_37n	-1	known	missense	c.99	p.N33K	1.000	NULL	NULL	-	no_errors	FRMD3	HGNC	ENSG00000172159	50	0	0.00	64	14	17.95	-	-	-
GABRG1	0	genome.wustl.edu	37	4	46066490	46066490	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	4	46066490	46066490	T	C	SNP	GABRG1	ENST00000295452	human	ensembl	69_37n	-1	known	missense	c.593	p.D198G	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg1_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG1	HGNC	ENSG00000163285	61	0	0.00	42	8	15.69	-	-	-
HOMER2	0	genome.wustl.edu	37	15	83561570	83561570	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	15	83561570	83561570	C	T	SNP	HOMER2	ENST00000304231	human	ensembl	69_37n	-1	known	missense	c.29	p.R10Q	1.000	pfam_EVH1,smart_EVH1,pfscan_EVH1	pfam_EVH1,smart_EVH1,pfscan_EVH1	-	no_errors	HOMER2	HGNC	ENSG00000103942	57	0	0.00	38	6	13.64	-	-	-
HRH2	0	genome.wustl.edu	37	5	175111006	175111006	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	5	175111006	175111006	G	A	SNP	HRH2	ENST00000377291	human	ensembl	69_37n	+1	known	missense	c.770	p.R257H	0.890	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Histamine_H2_recept,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Histamine_H2_recept,prints_7TM_GPCR_Rhodpsn,prints_5HT6_rcpt,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	HRH2	HGNC	ENSG00000113749	22	0	0.00	23	12	34.29	-	-	-
IGSF1	0	genome.wustl.edu	37	X	130409566	130409566	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	X	130409566	130409566	G	T	SNP	IGSF1	ENST00000370903	human	ensembl	69_37n	-1	known	missense	c.3085	p.P1029T	0.081	smart_Ig_sub,smart_Ig_sub2	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	IGSF1	HGNC	ENSG00000147255	71	0	0.00	50	24	32.43	-	-	-
KITLG	0	genome.wustl.edu	37	12	88928486	88928486	+	Silent	SNP	C	C	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	12	88928486	88928486	C	T	SNP	KITLG	ENST00000378535	human	ensembl	69_37n	-1	putative	silent	c.6	p.P2	0.002	superfamily_4_helix_cytokine-like_core	pfam_SCF,superfamily_4_helix_cytokine-like_core,pirsf_SCF	-	no_errors	KITLG	HGNC	ENSG00000049130	58	0	0.00	36	27	42.86	-	-	-
KPNA7	0	genome.wustl.edu	37	7	98792809	98792809	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	7	98792809	98792809	G	A	SNP	KPNA7	ENST00000327442	human	ensembl	69_37n	-1	known	missense	c.437	p.S146L	0.308	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,pfam_HEAT,pfam_Importin-a_IBB,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA7	HGNC	ENSG00000185467	25	0	0.00	22	12	35.29	-	-	-
MCC	0	genome.wustl.edu	37	5	112824048	112824049	+	In_Frame_Ins	INS	-	-	GCC			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	5	112824048	112824049	-	GCC	INS	MCC	ENST00000408903	human	ensembl	69_37n	-1	putative	in_frame_ins	c.64_63	p.21in_frame_insG	0.854:0.894	NULL	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	MCC	HGNC	ENSG00000171444	9	0	0.00	5	2	28.57	-	-	-
MDN1	0	genome.wustl.edu	37	6	90388353	90388353	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	6	90388353	90388353	G	T	SNP	MDN1	ENST00000369393	human	ensembl	69_37n	-1	known	missense	c.12377	p.A4126D	1.000	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	52	0	0.00	48	7	12.73	-	-	-
MYLK4	0	genome.wustl.edu	37	6	2685633	2685633	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	6	2685633	2685633	C	T	SNP	MYLK4	ENST00000268446	human	ensembl	69_37n	-1	known	missense	c.442	p.V148M	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MYLK4	HGNC	ENSG00000145949	40	0	0.00	49	11	18.33	-	-	-
NKX2-2	0	genome.wustl.edu	37	20	21492969	21492969	+	Silent	SNP	C	C	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	20	21492969	21492969	C	T	SNP	NKX2-2	ENST00000377142	human	ensembl	69_37n	-1	known	silent	c.414	p.A138	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	NKX2-2	HGNC	ENSG00000125820	87	0	0.00	76	9	10.59	-	-	-
NMT1	0	genome.wustl.edu	37	17	43138787	43138787	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	17	43138787	43138787	C	A	SNP	NMT1	ENST00000258960	human	ensembl	69_37n	+1	known	nonsense	c.90	p.C30*	1.000	pirsf_MyristoylCoA_TrFase	pfam_MyristoylCoA_TrFase_C,pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	-	no_errors	NMT1	HGNC	ENSG00000136448	42	0	0.00	12	10	45.45	-	-	-
OR10G2	0	genome.wustl.edu	37	14	22102916	22102916	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	14	22102916	22102916	C	G	SNP	OR10G2	ENST00000542433	human	ensembl	69_37n	-1	known	missense	c.83	p.R28T	0.000	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10G2	HGNC	ENSG00000255582	17	0	0.00	10	5	33.33	-	-	-
ORC5	0	genome.wustl.edu	37	7	103801544	103801544	+	Silent	SNP	A	A	G			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	7	103801544	103801544	A	G	SNP	ORC5	ENST00000297431	human	ensembl	69_37n	-1	known	silent	c.1125	p.A375	1.000	NULL	NULL	-	no_errors	ORC5	HGNC	ENSG00000164815	47	0	0.00	43	16	27.12	-	-	-
OTX2	0	genome.wustl.edu	37	14	57270978	57270978	+	Silent	SNP	C	C	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	14	57270978	57270978	C	T	SNP	OTX2	ENST00000339475	human	ensembl	69_37n	-1	known	silent	c.201	p.K67	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	pfam_Otx_TF_C,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Otx2_TF,prints_Otx_TF,pfscan_Homeodomain	-	no_errors	OTX2	HGNC	ENSG00000165588	18	0	0.00	22	6	21.43	-	-	-
PGBD3	0	genome.wustl.edu	37	10	50724809	50724809	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	10	50724809	50724809	C	T	SNP	PGBD3	ENST00000374127	human	ensembl	69_37n	-1	known	missense	c.352	p.D118N	0.334	NULL	NULL	-	no_errors	PGBD3	HGNC	ENSG00000243251	86	0	0.00	58	63	52.07	-	-	-
PLA2R1	0	genome.wustl.edu	37	2	160901625	160901625	+	Nonsense_Mutation	SNP	G	G	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	2	160901625	160901625	G	T	SNP	PLA2R1	ENST00000283243	human	ensembl	69_37n	-1	known	nonsense	c.153	p.C51*	1.000	superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	PLA2R1	HGNC	ENSG00000153246	28	0	0.00	22	4	15.38	-	-	-
PPP6R2	0	genome.wustl.edu	37	22	50879477	50879477	+	RNA	SNP	C	C	G			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	22	50879477	50879477	C	G	SNP	PPP6R2	ENST00000473283	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.012	-	-	-	no_errors	PPP6R2	HGNC	ENSG00000100239	32	0	0.00	24	6	20.00	-	-	-
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037863	10037863	+	RNA	DEL	C	C	-			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	Y	10037863	10037863	C	-	DEL	RNA5-8SP6	ENST00000515896	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705	41	0	0.00	22	3	11.11	-	-	-
RRBP1	0	genome.wustl.edu	37	20	17594817	17594817	+	RNA	SNP	A	A	G			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	20	17594817	17594817	A	G	SNP	RRBP1	ENST00000468428	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RRBP1	HGNC	ENSG00000125844	19	0	0.00	13	8	38.10	-	-	-
RYR1	0	genome.wustl.edu	37	19	38954140	38954140	+	Silent	SNP	C	C	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	19	38954140	38954140	C	T	SNP	RYR1	ENST00000359596	human	ensembl	69_37n	+1	known	silent	c.2655	p.R885	0.986	pfam_Ryanodine_rcpt,prints_Ryan_recept	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	56	0	0.00	41	21	33.87	-	-	-
SEPT5	0	genome.wustl.edu	37	22	19708174	19708174	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	22	19708174	19708174	G	A	SNP	SEPT5	ENST00000413258	human	ensembl	69_37n	+1	novel	missense	c.196	p.E66K	1.000	pfam_Cell_div_GTP-bd	pfam_Cell_div_GTP-bd	-	no_start_codon:pseudogene:no_stop_codon	SEPT5	HGNC	ENSG00000184702	38	0	0.00	38	24	38.71	-	-	-
SOX4	0	genome.wustl.edu	37	6	21594936	21594936	+	Silent	SNP	G	G	T			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	6	21594936	21594936	G	T	SNP	SOX4	ENST00000244745	human	ensembl	69_37n	+1	known	silent	c.171	p.G57	1.000	superfamily_HMG_superfamily,pirsf_SOX-12/11/4a	pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pirsf_SOX-12/11/4a,pfscan_HMG_superfamily	-	no_errors	SOX4	HGNC	ENSG00000124766	15	0	0.00	26	6	18.75	-	-	-
TP53	0	genome.wustl.edu	37	17	7577525	7577526	+	Frame_Shift_Ins	INS	-	-	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	17	7577525	7577526	-	A	INS	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_ins	c.756_755	p.T253fs	1.000:1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	48	0	0.00	28	15	34.88	-	-	-
VGLL4	0	genome.wustl.edu	37	3	11600885	11600885	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	3	11600885	11600885	G	C	SNP	VGLL4	ENST00000430365	human	ensembl	69_37n	-1	known	missense	c.540	p.N180K	1.000	NULL	smart_TDU_repeat	-	no_errors	VGLL4	HGNC	ENSG00000144560	75	0	0.00	44	9	16.98	-	-	-
ZNF295	0	genome.wustl.edu	37	21	43413758	43413758	+	Silent	SNP	G	G	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	21	43413758	43413758	G	A	SNP	ZNF295	ENST00000310826	human	ensembl	69_37n	-1	known	silent	c.447	p.V149	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZNF295	HGNC	ENSG00000173276	55	0	0.00	48	24	33.33	-	-	-
ZSWIM3	0	genome.wustl.edu	37	20	44506183	44506183	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A409-01A-11D-A243-09	TCGA-B6-A409-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	61f61966-d139-4a02-9c5c-5598d5322407	d061e421-1f2b-4e80-8765-38016a91cbda	20	44506183	44506183	G	A	SNP	ZSWIM3	ENST00000255152	human	ensembl	69_37n	+1	known	missense	c.986	p.R329K	0.007	NULL	pfam_Znf_SWIM,pfam_MULE_transposase_dom,pfam_Transposase,smart_Znf_PMZ,pfscan_Znf_SWIM	-	no_errors	ZSWIM3	HGNC	ENSG00000132801	27	0	0.00	27	12	30.00	-	-	-
