Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABL1	0	genome.wustl.edu	37	9	133755477	133755477	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	9	133755477	133755477	C	A	SNP	ABL1	ENST00000372348	human	ensembl	69_37n	+1	known	missense	c.1503	p.D501E	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_F-actin_binding,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL1	HGNC	ENSG00000097007	69	0	0.00	45	34	43.04	-	-	-
ABL1	0	genome.wustl.edu	37	9	133755477	133755477	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	9	133755477	133755477	C	A	SNP	ABL1	ENST00000372348	human	ensembl	69_37n	+1	known	missense	c.1503	p.D501E	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_F-actin_binding,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL1	HGNC	ENSG00000097007	102	1	0.97	45	34	43.04	-	-	-
AFF2	0	genome.wustl.edu	37	X	147743942	147743942	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	X	147743942	147743942	G	T	SNP	AFF2	ENST00000370460	human	ensembl	69_37n	+1	known	nonsense	c.694	p.E232*	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966	878	0	0.00	539	89	14.17	-	-	-
AFF2	0	genome.wustl.edu	37	X	147743942	147743942	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	X	147743942	147743942	G	T	SNP	AFF2	ENST00000370460	human	ensembl	69_37n	+1	known	nonsense	c.694	p.E232*	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966	1255	0	0.00	539	89	14.17	-	-	-
ATXN1	0	genome.wustl.edu	37	6	16328222	16328222	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	6	16328222	16328222	G	A	SNP	ATXN1	ENST00000244769	human	ensembl	69_37n	-1	known	missense	c.320	p.A107V	0.998	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788	34	0	0.00	68	13	16.05	-	-	-
ATXN1	0	genome.wustl.edu	37	6	16328222	16328222	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	6	16328222	16328222	G	A	SNP	ATXN1	ENST00000244769	human	ensembl	69_37n	-1	known	missense	c.320	p.A107V	0.998	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788	47	0	0.00	68	13	16.05	-	-	-
CSMD2	0	genome.wustl.edu	37	1	34042946	34042946	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	1	34042946	34042946	C	T	SNP	CSMD2	ENST00000373381	human	ensembl	69_37n	-1	known	missense	c.7526	p.R2509Q	1.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	107	0	0.00	45	36	44.44	-	-	-
DMD	0	genome.wustl.edu	37	X	32662397	32662397	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	X	32662397	32662397	G	A	SNP	DMD	ENST00000357033	human	ensembl	69_37n	-1	known	missense	c.1183	p.R395W	0.989	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	360	1	0.28	88	51	36.69	-	-	-
DMD	0	genome.wustl.edu	37	X	32662397	32662397	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	X	32662397	32662397	G	A	SNP	DMD	ENST00000357033	human	ensembl	69_37n	-1	known	missense	c.1183	p.R395W	0.989	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	227	0	0.00	88	51	36.69	-	-	-
FAM86EP	0	genome.wustl.edu	37	4	3951270	3951270	+	RNA	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	4	3951270	3951270	C	A	SNP	FAM86EP	ENST00000504375	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FAM86EP	HGNC	ENSG00000251669	19	0	0.00	16	6	27.27	-	-	-
FAM86EP	0	genome.wustl.edu	37	4	3951270	3951270	+	RNA	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	4	3951270	3951270	C	A	SNP	FAM86EP	ENST00000504375	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FAM86EP	HGNC	ENSG00000251669	18	0	0.00	16	6	27.27	-	-	-
FAT3	0	genome.wustl.edu	37	11	92531859	92531859	+	Silent	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	11	92531859	92531859	C	T	SNP	FAT3	ENST00000298047	human	ensembl	69_37n	+1	known	silent	c.5680	p.L1894	0.833	superfamily_Cadherin-like	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	98	0	0.00	77	14	15.38	-	-	-
FAT3	0	genome.wustl.edu	37	11	92531859	92531859	+	Silent	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	11	92531859	92531859	C	T	SNP	FAT3	ENST00000298047	human	ensembl	69_37n	+1	known	silent	c.5680	p.L1894	0.833	superfamily_Cadherin-like	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	128	0	0.00	77	14	15.38	-	-	-
GIMAP8	0	genome.wustl.edu	37	7	150164402	150164402	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	7	150164402	150164402	A	G	SNP	GIMAP8	ENST00000307271	human	ensembl	69_37n	+1	known	missense	c.616	p.T206A	0.000	NULL	pfam_AIG1	-	no_errors	GIMAP8	HGNC	ENSG00000171115	240	1	0.41	189	68	26.46	-	-	-
GIMAP8	0	genome.wustl.edu	37	7	150164402	150164402	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	7	150164402	150164402	A	G	SNP	GIMAP8	ENST00000307271	human	ensembl	69_37n	+1	known	missense	c.616	p.T206A	0.000	NULL	pfam_AIG1	-	no_errors	GIMAP8	HGNC	ENSG00000171115	370	0	0.00	189	68	26.46	-	-	-
GPI	0	genome.wustl.edu	37	19	34870465	34870465	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	19	34870465	34870465	A	G	SNP	GPI	ENST00000415930	human	ensembl	69_37n	+1	known	missense	c.781	p.T261A	1.000	pfam_G6P_Isomerase	pfam_G6P_Isomerase,prints_G6P_Isomerase	-	no_errors	GPI	HGNC	ENSG00000105220	107	1	0.93	99	15	13.16	-	-	-
GPI	0	genome.wustl.edu	37	19	34870465	34870465	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	19	34870465	34870465	A	G	SNP	GPI	ENST00000415930	human	ensembl	69_37n	+1	known	missense	c.781	p.T261A	1.000	pfam_G6P_Isomerase	pfam_G6P_Isomerase,prints_G6P_Isomerase	-	no_errors	GPI	HGNC	ENSG00000105220	63	0	0.00	99	15	13.16	-	-	-
HIST1H2AD	0	genome.wustl.edu	37	6	26199318	26199318	+	Silent	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	6	26199318	26199318	G	A	SNP	HIST1H2AD	ENST00000341023	human	ensembl	69_37n	-1	known	silent	c.154	p.L52	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AD	HGNC	ENSG00000196866	58	0	0.00	70	8	10.26	-	-	-
HIST1H2AD	0	genome.wustl.edu	37	6	26199318	26199318	+	Silent	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	6	26199318	26199318	G	A	SNP	HIST1H2AD	ENST00000341023	human	ensembl	69_37n	-1	known	silent	c.154	p.L52	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AD	HGNC	ENSG00000196866	63	0	0.00	70	8	10.26	-	-	-
HSPA1A	0	genome.wustl.edu	37	6	31783755	31783755	+	Silent	SNP	T	T	C			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	6	31783755	31783755	T	C	SNP	HSPA1A	ENST00000375651	human	ensembl	69_37n	+1	known	silent	c.222	p.I74	0.999	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA1A	HGNC	ENSG00000204389	9	0	0.00	11	9	45.00	-	-	-
KIF4A	0	genome.wustl.edu	37	X	69623828	69623828	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	X	69623828	69623828	A	T	SNP	KIF4A	ENST00000374403	human	ensembl	69_37n	+1	known	missense	c.2734	p.I912L	1.000	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4A	HGNC	ENSG00000090889	54	0	0.00	34	26	43.33	-	-	-
KIF4A	0	genome.wustl.edu	37	X	69623828	69623828	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	X	69623828	69623828	A	T	SNP	KIF4A	ENST00000374403	human	ensembl	69_37n	+1	known	missense	c.2734	p.I912L	1.000	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4A	HGNC	ENSG00000090889	100	0	0.00	34	26	43.33	-	-	-
LTBP4	0	genome.wustl.edu	37	19	41133200	41133201	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	19	41133200	41133201	-	G	INS	LTBP4	ENST00000308370	human	ensembl	69_37n	+1	known	frame_shift_ins	c.4504_4505	p.D1503fs	0.993:0.784	NULL	pfam_EGF-like_Ca-bd,pfam_TB_dom,superfamily_TB_dom,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006	11	0	0.00	4	2	33.33	-	-	-
MIR1266	0	genome.wustl.edu	37	15	52569338	52569338	+	RNA	DEL	C	C	-			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	15	52569338	52569338	C	-	DEL	MIR1266	ENST00000408125	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR1266	HGNC	ENSG00000221052	42	0	0.00	15	2	11.76	-	-	-
MKRN3	0	genome.wustl.edu	37	15	23811294	23811294	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	15	23811294	23811294	C	T	SNP	MKRN3	ENST00000314520	human	ensembl	69_37n	+1	known	missense	c.365	p.S122F	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455	40	0	0.00	36	26	41.94	-	-	-
MKRN3	0	genome.wustl.edu	37	15	23811294	23811294	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	15	23811294	23811294	C	T	SNP	MKRN3	ENST00000314520	human	ensembl	69_37n	+1	known	missense	c.365	p.S122F	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455	54	0	0.00	36	26	41.94	-	-	-
MMP27	0	genome.wustl.edu	37	11	102575447	102575447	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	11	102575447	102575447	C	G	SNP	MMP27	ENST00000260229	human	ensembl	69_37n	-1	known	missense	c.162	p.K54N	0.006	pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like,pirsf_Pept_M10A_matrix_strom	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin/matrixin_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,pirsf_Pept_M10A_matrix_strom,prints_Pept_M10A_matrixin	-	no_errors	MMP27	HGNC	ENSG00000137675	169	0	0.00	101	62	38.04	-	-	-
MMP27	0	genome.wustl.edu	37	11	102575447	102575447	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	11	102575447	102575447	C	G	SNP	MMP27	ENST00000260229	human	ensembl	69_37n	-1	known	missense	c.162	p.K54N	0.006	pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like,pirsf_Pept_M10A_matrix_strom	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin/matrixin_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,pirsf_Pept_M10A_matrix_strom,prints_Pept_M10A_matrixin	-	no_errors	MMP27	HGNC	ENSG00000137675	220	0	0.00	101	62	38.04	-	-	-
NBPF12	0	genome.wustl.edu	37	1	146459553	146459556	+	Frame_Shift_Del	DEL	GATA	GATA	-			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	GATA	GATA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	1	146459553	146459556	GATA	-	DEL	NBPF12	ENST00000442909	human	ensembl	69_37n	+1	novel	frame_shift_del	c.8794_8797	p.R2933fs	0.160:0.145:0.119:0.077	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF12	HGNC	ENSG00000186275	16	0	0.00	33	6	15.38	-	-	-
NLRP7	0	genome.wustl.edu	37	19	55450913	55450913	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	19	55450913	55450913	G	A	SNP	NLRP7	ENST00000446217	human	ensembl	69_37n	-1	known	missense	c.1358	p.A453V	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634	38	0	0.00	61	18	22.50	-	-	-
NLRP7	0	genome.wustl.edu	37	19	55450913	55450913	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	19	55450913	55450913	G	A	SNP	NLRP7	ENST00000446217	human	ensembl	69_37n	-1	known	missense	c.1358	p.A453V	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634	46	0	0.00	61	18	22.50	-	-	-
NOP14-AS1	0	genome.wustl.edu	37	4	2952750	2952750	+	RNA	SNP	C	C	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	4	2952750	2952750	C	G	SNP	NOP14-AS1	ENST00000515194	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	NOP14-AS1	HGNC	ENSG00000249673	56	0	0.00	39	22	36.07	-	-	-
NOP14-AS1	0	genome.wustl.edu	37	4	2952750	2952750	+	RNA	SNP	C	C	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	4	2952750	2952750	C	G	SNP	NOP14-AS1	ENST00000515194	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	NOP14-AS1	HGNC	ENSG00000249673	96	0	0.00	39	22	36.07	-	-	-
NOS1	0	genome.wustl.edu	37	12	117723956	117723956	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	12	117723956	117723956	G	A	SNP	NOS1	ENST00000317775	human	ensembl	69_37n	-1	known	missense	c.1243	p.R415W	0.997	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_met	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_met,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250	80	0	0.00	47	47	50.00	-	-	-
OR2V2	0	genome.wustl.edu	37	5	180582416	180582416	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	5	180582416	180582416	G	C	SNP	OR2V2	ENST00000328275	human	ensembl	69_37n	+1	known	missense	c.474	p.L158F	0.347	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2V2	HGNC	ENSG00000182613	304	0	0.00	263	181	40.77	-	-	-
OR2V2	0	genome.wustl.edu	37	5	180582416	180582416	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	5	180582416	180582416	G	C	SNP	OR2V2	ENST00000328275	human	ensembl	69_37n	+1	known	missense	c.474	p.L158F	0.347	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2V2	HGNC	ENSG00000182613	347	0	0.00	263	181	40.77	-	-	-
PCDHGB3	0	genome.wustl.edu	37	5	140750987	140750987	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	5	140750987	140750987	C	A	SNP	PCDHGB3	ENST00000576222	human	ensembl	69_37n	+1	known	missense	c.1026	p.D342E	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	74	0	0.00	168	35	17.24	-	-	-
PCDHGB3	0	genome.wustl.edu	37	5	140750987	140750987	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	5	140750987	140750987	C	A	SNP	PCDHGB3	ENST00000576222	human	ensembl	69_37n	+1	known	missense	c.1026	p.D342E	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	174	0	0.00	168	35	17.24	-	-	-
PCDHGB3	0	genome.wustl.edu	37	5	140751317	140751317	+	Silent	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	5	140751317	140751317	C	T	SNP	PCDHGB3	ENST00000576222	human	ensembl	69_37n	+1	known	silent	c.1356	p.F452	0.913	superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	134	0	0.00	308	55	15.15	-	-	-
PCDHGB3	0	genome.wustl.edu	37	5	140751317	140751317	+	Silent	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	5	140751317	140751317	C	T	SNP	PCDHGB3	ENST00000576222	human	ensembl	69_37n	+1	known	silent	c.1356	p.F452	0.913	superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	251	0	0.00	308	55	15.15	-	-	-
POTEM	0	genome.wustl.edu	37	14	20019842	20019842	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	14	20019842	20019842	C	T	SNP	POTEM	ENST00000547848	human	ensembl	69_37n	-1	known	missense	c.379	p.A127T	0.005	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEM	HGNC	ENSG00000187537	16	0	0.00	19	4	17.39	-	-	-
PRKRA	0	genome.wustl.edu	37	2	179300974	179300974	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	179300974	179300974	A	T	SNP	PRKRA	ENST00000325748	human	ensembl	69_37n	-1	known	missense	c.682	p.L228I	0.998	NULL	pfam_Ds-RNA-bd,smart_Ds-RNA-bd,pfscan_Ds-RNA-bd	-	no_errors	PRKRA	HGNC	ENSG00000180228	219	0	0.00	184	42	18.58	-	-	-
PRKRA	0	genome.wustl.edu	37	2	179300974	179300974	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	2	179300974	179300974	A	T	SNP	PRKRA	ENST00000325748	human	ensembl	69_37n	-1	known	missense	c.682	p.L228I	0.998	NULL	pfam_Ds-RNA-bd,smart_Ds-RNA-bd,pfscan_Ds-RNA-bd	-	no_errors	PRKRA	HGNC	ENSG00000180228	355	0	0.00	184	42	18.58	-	-	-
RLF	0	genome.wustl.edu	37	1	40654738	40654738	+	Silent	SNP	A	A	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	1	40654738	40654738	A	G	SNP	RLF	ENST00000372771	human	ensembl	69_37n	+1	known	silent	c.249	p.Q83	0.998	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RLF	HGNC	ENSG00000117000	40	0	0.00	65	20	23.53	-	-	-
SCN2A	0	genome.wustl.edu	37	2	166246050	166246050	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	166246050	166246050	A	T	SNP	SCN2A	ENST00000283256	human	ensembl	69_37n	+1	known	missense	c.5734	p.I1912F	1.000	smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	309	0	0.00	235	64	21.40	-	-	-
SCN2A	0	genome.wustl.edu	37	2	166246050	166246050	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	2	166246050	166246050	A	T	SNP	SCN2A	ENST00000283256	human	ensembl	69_37n	+1	known	missense	c.5734	p.I1912F	1.000	smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	579	1	0.17	235	64	21.40	-	-	-
SCN7A	0	genome.wustl.edu	37	2	167298131	167298131	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	167298131	167298131	G	T	SNP	SCN7A	ENST00000409855	human	ensembl	69_37n	-1	known	missense	c.1932	p.F644L	0.987	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546	278	0	0.00	310	104	25.12	-	-	-
SCN7A	0	genome.wustl.edu	37	2	167298131	167298131	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	2	167298131	167298131	G	T	SNP	SCN7A	ENST00000409855	human	ensembl	69_37n	-1	known	missense	c.1932	p.F644L	0.987	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546	473	0	0.00	310	104	25.12	-	-	-
SEPHS1	0	genome.wustl.edu	37	10	13386865	13386865	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	10	13386865	13386865	G	A	SNP	SEPHS1	ENST00000327347	human	ensembl	69_37n	-1	known	missense	c.86	p.T29I	1.000	pirsf_SelD,tigrfam_SelD	pfam_AIR_synth_C,pfam_AIR_synth,superfamily_AIR_synth_C,superfamily_PurM_N-like,pirsf_SelD,tigrfam_SelD	-	no_errors	SEPHS1	HGNC	ENSG00000086475	118	0	0.00	56	125	69.06	-	-	-
SEPHS1	0	genome.wustl.edu	37	10	13386865	13386865	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	10	13386865	13386865	G	A	SNP	SEPHS1	ENST00000327347	human	ensembl	69_37n	-1	known	missense	c.86	p.T29I	1.000	pirsf_SelD,tigrfam_SelD	pfam_AIR_synth_C,pfam_AIR_synth,superfamily_AIR_synth_C,superfamily_PurM_N-like,pirsf_SelD,tigrfam_SelD	-	no_errors	SEPHS1	HGNC	ENSG00000086475	313	0	0.00	56	125	69.06	-	-	-
SEPT10	0	genome.wustl.edu	37	2	110301779	110301779	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	110301779	110301779	A	C	SNP	SEPT10	ENST00000356688	human	ensembl	69_37n	-1	putative	missense	c.1555	p.F519V	0.348	NULL	pfam_Cell_div_GTP-bd	-	no_errors	SEPT10	HGNC	ENSG00000186522	30	0	0.00	19	6	24.00	-	-	-
SHROOM3	0	genome.wustl.edu	37	4	77662080	77662081	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	4	77662080	77662081	-	T	INS	SHROOM3	ENST00000296043	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2754_2755	p.P918fs	0.000:0.457	pfam_ASD1	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	24	0	0.00	6	5	45.45	-	-	-
SHROOM3	0	genome.wustl.edu	37	4	77662080	77662081	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	4	77662080	77662081	-	T	INS	SHROOM3	ENST00000296043	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2754_2755	p.P918fs	0.000:0.457	pfam_ASD1	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	15	0	0.00	6	5	45.45	-	-	-
SNCAIP	0	genome.wustl.edu	37	5	121786792	121786792	+	Silent	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	5	121786792	121786792	C	A	SNP	SNCAIP	ENST00000379533	human	ensembl	69_37n	+1	known	silent	c.2391	p.P797	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692	250	0	0.00	73	49	40.16	-	-	-
SNCAIP	0	genome.wustl.edu	37	5	121786792	121786792	+	Silent	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	5	121786792	121786792	C	A	SNP	SNCAIP	ENST00000379533	human	ensembl	69_37n	+1	known	silent	c.2391	p.P797	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692	171	0	0.00	73	49	40.16	-	-	-
TBP	0	genome.wustl.edu	37	6	170871052	170871052	+	Silent	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	6	170871052	170871052	G	A	SNP	TBP	ENST00000230354	human	ensembl	69_37n	+1	known	silent	c.228	p.Q76	0.994	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	31	0	0.00	72	25	25.77	-	-	-
TFAP2C	0	genome.wustl.edu	37	20	55208476	55208476	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	20	55208476	55208476	G	A	SNP	TFAP2C	ENST00000201031	human	ensembl	69_37n	+1	known	missense	c.654	p.M218I	0.994	prints_TF_AP2_gamma	pfam_TF_AP2_C,prints_TF_AP2_C,prints_TF_AP2_gamma	-	no_errors	TFAP2C	HGNC	ENSG00000087510	70	0	0.00	65	10	13.33	-	-	-
TFAP2C	0	genome.wustl.edu	37	20	55208476	55208476	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	20	55208476	55208476	G	A	SNP	TFAP2C	ENST00000201031	human	ensembl	69_37n	+1	known	missense	c.654	p.M218I	0.994	prints_TF_AP2_gamma	pfam_TF_AP2_C,prints_TF_AP2_C,prints_TF_AP2_gamma	-	no_errors	TFAP2C	HGNC	ENSG00000087510	67	0	0.00	65	10	13.33	-	-	-
TMEM106B	0	genome.wustl.edu	37	7	12258148	12258148	+	Splice_Site	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	7	12258148	12258148	G	A	SNP	TMEM106B	ENST00000396667	human	ensembl	69_37n	+1	known	splice_site	c.281+1	e2+1	1.000	-	-	-	no_errors	TMEM106B	HGNC	ENSG00000106460	101	0	0.00	123	14	10.22	-	-	-
TMEM106B	0	genome.wustl.edu	37	7	12258148	12258148	+	Splice_Site	SNP	G	G	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	7	12258148	12258148	G	A	SNP	TMEM106B	ENST00000396667	human	ensembl	69_37n	+1	known	splice_site	c.281+1	e2+1	1.000	-	-	-	no_errors	TMEM106B	HGNC	ENSG00000106460	187	0	0.00	123	14	10.22	-	-	-
TP53	0	genome.wustl.edu	37	17	7578203	7578203	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	17	7578203	7578203	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.646	p.V216M	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	135	1	0.74	56	54	49.09	-	-	-
TP53	0	genome.wustl.edu	37	17	7578203	7578203	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	17	7578203	7578203	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.646	p.V216M	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	91	0	0.00	56	54	49.09	-	-	-
UNC13C	0	genome.wustl.edu	37	15	54306670	54306670	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	15	54306670	54306670	A	G	SNP	UNC13C	ENST00000260323	human	ensembl	69_37n	+1	known	missense	c.1570	p.T524A	0.934	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_Ca-dep,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	166	0	0.00	168	26	13.40	-	-	-
UNC13C	0	genome.wustl.edu	37	15	54306670	54306670	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	15	54306670	54306670	A	G	SNP	UNC13C	ENST00000260323	human	ensembl	69_37n	+1	known	missense	c.1570	p.T524A	0.934	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_Ca-dep,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	360	0	0.00	168	26	13.40	-	-	-
VWF	0	genome.wustl.edu	37	12	6134806	6134806	+	Silent	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	12	6134806	6134806	C	A	SNP	VWF	ENST00000261405	human	ensembl	69_37n	-1	known	silent	c.3162	p.T1054	0.587	pirsf_VWF,smart_Unchr_dom_Cys-rich	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	45	0	0.00	63	10	13.70	-	-	-
VWF	0	genome.wustl.edu	37	12	6134806	6134806	+	Silent	SNP	C	C	A			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	12	6134806	6134806	C	A	SNP	VWF	ENST00000261405	human	ensembl	69_37n	-1	known	silent	c.3162	p.T1054	0.587	pirsf_VWF,smart_Unchr_dom_Cys-rich	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	69	0	0.00	63	10	13.70	-	-	-
XIST	0	genome.wustl.edu	37	X	73062010	73062011	+	RNA	INS	-	-	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	X	73062010	73062011	-	T	INS	XIST	ENST00000429829	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	10	0	0.00	4	4	50.00	-	-	-
XIST	0	genome.wustl.edu	37	X	73062010	73062011	+	RNA	INS	-	-	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	X	73062010	73062011	-	T	INS	XIST	ENST00000429829	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	20	0	0.00	4	4	50.00	-	-	-
ZEB2	0	genome.wustl.edu	37	2	145147116	145147116	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	145147116	145147116	C	T	SNP	ZEB2	ENST00000303660	human	ensembl	69_37n	-1	known	missense	c.3547	p.E1183K	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZEB2	HGNC	ENSG00000169554	356	1	0.28	358	85	19.19	-	-	-
ZEB2	0	genome.wustl.edu	37	2	145147116	145147116	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	2	145147116	145147116	C	T	SNP	ZEB2	ENST00000303660	human	ensembl	69_37n	-1	known	missense	c.3547	p.E1183K	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZEB2	HGNC	ENSG00000169554	397	0	0.00	358	85	19.19	-	-	-
ZMYM3	0	genome.wustl.edu	37	X	70472853	70472854	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	X	70472853	70472854	-	C	INS	ZMYM3	ENST00000373988	human	ensembl	69_37n	-1	known	frame_shift_ins	c.253_252	p.L84fs	1.000:1.000	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH	-	no_errors	ZMYM3	HGNC	ENSG00000147130	45	0	0.00	27	3	10.00	-	-	-
