Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC6	0	genome.wustl.edu	37	16	16315544	16315544	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	16	16315544	16315544	C	A	SNP	ABCC6	ENST00000205557	human	ensembl	69_37n	-1	known	missense	c.181	p.G61C	0.509	tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC6	HGNC	ENSG00000091262	133	0	0.00	95	32	24.81	-	-	-
ANK1	0	genome.wustl.edu	37	8	41591581	41591581	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	8	41591581	41591581	A	T	SNP	ANK1	ENST00000396942	human	ensembl	69_37n	-1	known	missense	c.136	p.L46M	0.979	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534	126	0	0.00	103	14	11.97	-	-	-
ATP2A1	0	genome.wustl.edu	37	16	28909329	28909329	+	Silent	SNP	C	C	A			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	16	28909329	28909329	C	A	SNP	ATP2A1	ENST00000357084	human	ensembl	69_37n	+1	known	silent	c.1428	p.R476	1.000	superfamily_ATPase_cation_domN,tigrfam_ATPase_P-typ_Ca-transp	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_H-transp,tigrfam_ATPase_P-typ_Ca-transp,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2A1	HGNC	ENSG00000196296	55	0	0.00	45	22	32.84	-	-	-
C6orf141	0	genome.wustl.edu	37	6	49519103	49519103	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	6	49519103	49519103	G	C	SNP	C6orf141	ENST00000371194	human	ensembl	69_37n	+1	known	missense	c.598	p.E200Q	0.005	NULL	NULL	-	no_errors	C6orf141	HGNC	ENSG00000197261	81	0	0.00	35	16	31.37	-	-	-
C8orf4	0	genome.wustl.edu	37	8	40011156	40011156	+	Silent	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	8	40011156	40011156	C	T	SNP	C8orf4	ENST00000315792	human	ensembl	69_37n	+1	known	silent	c.105	p.A35	0.001	NULL	NULL	-	no_errors	C8orf4	HGNC	ENSG00000176907	144	0	0.00	135	61	31.12	-	-	-
CNTN4	0	genome.wustl.edu	37	3	3085276	3085276	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	3	3085276	3085276	C	T	SNP	CNTN4	ENST00000397461	human	ensembl	69_37n	+1	known	missense	c.2699	p.P900L	1.000	superfamily_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	CNTN4	HGNC	ENSG00000144619	93	0	0.00	113	31	21.38	-	-	-
DNAH10	0	genome.wustl.edu	37	12	124387592	124387592	+	Silent	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	12	124387592	124387592	C	T	SNP	DNAH10	ENST00000409039	human	ensembl	69_37n	+1	known	silent	c.9393	p.V3131	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_PyrdxlP-dep_Trfase_major_dom,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	85	0	0.00	118	17	12.59	-	-	-
FJX1	0	genome.wustl.edu	37	11	35641314	35641315	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	11	35641314	35641315	-	T	INS	FJX1	ENST00000317811	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1130_1131	p.E377fs	1.000:1.000	pfam_DUF1193	pfam_DUF1193	-	no_errors	FJX1	HGNC	ENSG00000179431	17	0	0.00	5	5	50.00	-	-	-
GHRL	0	genome.wustl.edu	37	3	10331484	10331484	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	3	10331484	10331484	C	T	SNP	GHRL	ENST00000335542	human	ensembl	69_37n	-1	known	missense	c.187	p.G63S	0.000	pfam_Motilin_assoc	pfam_Motilin_assoc,pfam_Motilin_ghrelin,prints_Preproghrelin	-	no_errors	GHRL	HGNC	ENSG00000157017	173	0	0.00	65	44	40.37	-	-	-
IGLV2-23	0	genome.wustl.edu	37	22	23040687	23040687	+	Silent	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	22	23040687	23040687	C	T	SNP	IGLV2-23	ENST00000390306	human	ensembl	69_37n	+1	known	silent	c.135	p.S45	0.013	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon:bad_bp_length_for_coding_region	IGLV2-23	HGNC	ENSG00000211660	147	0	0.00	96	23	19.33	-	-	-
IL1RL2	0	genome.wustl.edu	37	2	102804317	102804317	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	2	102804317	102804317	C	G	SNP	IL1RL2	ENST00000441515	human	ensembl	69_37n	+1	known	missense	c.70	p.P24A	0.057	NULL	pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom,prints_IL1_rcpt_1,prints_IL1_rcpt_I/II	-	no_errors	IL1RL2	HGNC	ENSG00000115598	174	0	0.00	75	11	12.64	-	-	-
IMPG1	0	genome.wustl.edu	37	6	76751758	76751758	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	6	76751758	76751758	C	T	SNP	IMPG1	ENST00000369950	human	ensembl	69_37n	-1	known	missense	c.153	p.M51I	0.001	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	IMPG1	HGNC	ENSG00000112706	306	1	0.33	310	42	11.86	-	-	-
LRIT1	0	genome.wustl.edu	37	10	85997061	85997062	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	10	85997061	85997062	CA	-	DEL	LRIT1	ENST00000372105	human	ensembl	69_37n	-1	known	frame_shift_del	c.504_503	p.M168fs	0.995:0.993	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	LRIT1	HGNC	ENSG00000148602	23	0	0.00	18	18	50.00	-	-	-
MEGF8	0	genome.wustl.edu	37	19	42840407	42840407	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	19	42840407	42840407	C	T	SNP	MEGF8	ENST00000251268	human	ensembl	69_37n	+1	known	missense	c.1153	p.R385W	0.999	NULL	pfam_CUB,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB,superfamily_Plexin-like_fold,smart_CUB,smart_EGF-like,smart_Plexin-like,smart_EGF-like_Ca-bd,smart_EGF_laminin,pfscan_CUB,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429	38	0	0.00	25	7	21.88	-	-	-
MIR1204	0	genome.wustl.edu	37	8	128808257	128808257	+	RNA	SNP	G	G	C			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	8	128808257	128808257	G	C	SNP	MIR1204	ENST00000408388	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR1204	HGNC	ENSG00000221315	100	0	0.00	118	28	19.05	-	-	-
MLLT4	0	genome.wustl.edu	37	6	168312082	168312082	+	Nonsense_Mutation	SNP	C	C	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	6	168312082	168312082	C	G	SNP	MLLT4	ENST00000366806	human	ensembl	69_37n	+1	known	nonsense	c.1950	p.Y650*	1.000	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396	160	0	0.00	115	41	26.28	-	-	-
MOSPD2	0	genome.wustl.edu	37	X	14910870	14910870	+	Silent	SNP	T	T	A			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	X	14910870	14910870	T	A	SNP	MOSPD2	ENST00000380492	human	ensembl	69_37n	+1	known	silent	c.105	p.R35	1.000	superfamily_CRAL/TRIO_N_dom	pfam_CRAL-TRIO_dom,pfam_Major_sperm,superfamily_CRAL-TRIO_dom,superfamily_PapD-like,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_Major_sperm	-	no_errors	MOSPD2	HGNC	ENSG00000130150	213	0	0.00	204	56	21.46	-	-	-
MYO9B	0	genome.wustl.edu	37	19	17313112	17313112	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	19	17313112	17313112	G	T	SNP	MYO9B	ENST00000397274	human	ensembl	69_37n	+1	known	missense	c.4836	p.K1612N	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9B	HGNC	ENSG00000099331	36	0	0.00	31	5	13.89	-	-	-
NTRK1	0	genome.wustl.edu	37	1	156843599	156843599	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	1	156843599	156843599	G	A	SNP	NTRK1	ENST00000524377	human	ensembl	69_37n	+1	known	missense	c.1025	p.R342Q	0.019	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Cys-rich_flank_reg_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_neurotrophic_rcpt_1,prints_Tyr_kinase_NGF_rcpt	-	no_errors	NTRK1	HGNC	ENSG00000198400	48	0	0.00	32	12	27.27	-	-	-
NUP214	0	genome.wustl.edu	37	9	134003062	134003062	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	9	134003062	134003062	A	G	SNP	NUP214	ENST00000451030	human	ensembl	69_37n	+1	known	missense	c.197	p.N66S	1.000	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883	73	0	0.00	58	17	22.67	-	-	-
PDE11A	0	genome.wustl.edu	37	2	178565928	178565928	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	2	178565928	178565928	G	A	SNP	PDE11A	ENST00000286063	human	ensembl	69_37n	-1	known	missense	c.2165	p.A722V	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE11A	HGNC	ENSG00000128655	133	0	0.00	79	16	16.84	-	-	-
PHKA2	0	genome.wustl.edu	37	X	18943843	18943843	+	Silent	SNP	G	G	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	X	18943843	18943843	G	T	SNP	PHKA2	ENST00000379942	human	ensembl	69_37n	-1	known	silent	c.1512	p.V504	0.914	pfam_Glyco_hydro_15	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC	ENSG00000044446	194	0	0.00	161	38	19.10	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	95	0	0.00	95	33	25.78	-	-	-
PRDM8	0	genome.wustl.edu	37	4	81124648	81124648	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	4	81124648	81124648	C	G	SNP	PRDM8	ENST00000339711	human	ensembl	69_37n	+1	known	missense	c.2032	p.R678G	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM8	HGNC	ENSG00000152784	63	0	0.00	19	10	34.48	-	-	-
PRSS57	0	genome.wustl.edu	37	19	687116	687117	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	19	687116	687117	-	G	INS	PRSS57	ENST00000329267	human	ensembl	69_37n	-1	known	frame_shift_ins	c.454_453	p.T151fs	0.000:0.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6	-	no_errors	PRSS57	HGNC	ENSG00000185198	30	0	0.00	23	4	14.81	-	-	-
RAVER1	0	genome.wustl.edu	37	19	10434107	10434107	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	19	10434107	10434107	C	T	SNP	RAVER1	ENST00000293677	human	ensembl	69_37n	-1	known	missense	c.943	p.A315T	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RAVER1	HGNC	ENSG00000161847	24	0	0.00	8	5	35.71	-	-	-
SORCS1	0	genome.wustl.edu	37	10	108412155	108412155	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	10	108412155	108412155	C	G	SNP	SORCS1	ENST00000344440	human	ensembl	69_37n	-1	known	missense	c.2460	p.M820I	1.000	pfam_PKD_dom,superfamily_PKD_dom	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018	133	0	0.00	121	26	17.69	-	-	-
SPEN	0	genome.wustl.edu	37	1	16254679	16254679	+	Silent	SNP	G	G	A			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	1	16254679	16254679	G	A	SNP	SPEN	ENST00000375759	human	ensembl	69_37n	+1	known	silent	c.1944	p.R648	0.952	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526	84	0	0.00	82	18	18.00	-	-	-
TBC1D3P1-DHX40P1	0	genome.wustl.edu	37	17	58092166	58092166	+	RNA	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	17	58092166	58092166	C	T	SNP	TBC1D3P1-DHX40P1	ENST00000407042	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TBC1D3P1-DHX40P1	HGNC	ENSG00000267104	43	0	0.00	19	6	24.00	-	-	-
TCF3	0	genome.wustl.edu	37	19	1612215	1612216	+	Frame_Shift_Ins	INS	-	-	TA			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	19	1612215	1612216	-	TA	INS	TCF3	ENST00000344749	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1804_1803	p.Q601fs	1.000:1.000	superfamily_HLH_DNA-bd,smart_HLH_DNA-bd	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	TCF3	HGNC	ENSG00000071564	14	0	0.00	9	5	35.71	-	-	-
TOPORS	0	genome.wustl.edu	37	9	32541997	32541997	+	Silent	SNP	G	G	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	9	32541997	32541997	G	T	SNP	TOPORS	ENST00000360538	human	ensembl	69_37n	-1	known	silent	c.2526	p.T842	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TOPORS	HGNC	ENSG00000197579	132	0	0.00	105	23	17.97	-	-	-
UPF3B	0	genome.wustl.edu	37	X	118968924	118968924	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	X	118968924	118968924	C	T	SNP	UPF3B	ENST00000276201	human	ensembl	69_37n	-1	known	missense	c.1369	p.D457N	0.996	NULL	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3B	HGNC	ENSG00000125351	174	0	0.00	155	66	29.86	-	-	-
USP39	0	genome.wustl.edu	37	2	85857864	85857864	+	Silent	SNP	T	T	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	2	85857864	85857864	T	G	SNP	USP39	ENST00000409470	human	ensembl	69_37n	+1	known	silent	c.744	p.P248	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19	-	no_errors	USP39	HGNC	ENSG00000168883	81	0	0.00	72	12	14.29	-	-	-
WDR96	0	genome.wustl.edu	37	10	105922136	105922136	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	10	105922136	105922136	G	A	SNP	WDR96	ENST00000357060	human	ensembl	69_37n	-1	known	missense	c.3272	p.P1091L	0.004	NULL	superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu	-	no_errors	WDR96	HGNC	ENSG00000197748	184	0	0.00	134	28	17.28	-	-	-
XK	0	genome.wustl.edu	37	X	37553705	37553705	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	X	37553705	37553705	C	T	SNP	XK	ENST00000378616	human	ensembl	69_37n	+1	known	missense	c.412	p.R138W	0.998	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XK	HGNC	ENSG00000047597	151	0	0.00	199	26	11.56	-	-	-
ZFHX4	0	genome.wustl.edu	37	8	77768353	77768353	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	8	77768353	77768353	C	T	SNP	ZFHX4	ENST00000521891	human	ensembl	69_37n	+1	known	missense	c.9196	p.R3066C	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	63	0	0.00	54	17	23.94	-	-	-
ZNF765	0	genome.wustl.edu	37	19	53911368	53911368	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	19	53911368	53911368	A	G	SNP	ZNF765	ENST00000396408	human	ensembl	69_37n	+1	known	missense	c.560	p.H187R	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF765	HGNC	ENSG00000196417	76	0	0.00	106	21	16.41	-	-	-
ZSCAN21	0	genome.wustl.edu	37	7	99654841	99654841	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0EB-01A-11W-A050-09	TCGA-BH-A0EB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3861ca01-bcc3-42a9-835d-1ef9f1a053bd	991496de-9acd-43e0-b853-2c19c155254e	7	99654841	99654841	G	A	SNP	ZSCAN21	ENST00000292450	human	ensembl	69_37n	+1	known	missense	c.212	p.C71Y	1.000	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN21	HGNC	ENSG00000166529	43	0	0.00	22	10	31.25	-	-	-
