Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AAAS	0	genome.wustl.edu	37	12	53702291	53702291	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	53702291	53702291	C	T	SNP	AAAS	ENST00000209873	human	ensembl	69_37n	-1	known	missense	c.1109	p.G370E	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AAAS	HGNC	ENSG00000094914	178	0	0.00	274	47	14.55	-	-	-
ALPK1	0	genome.wustl.edu	37	4	113333139	113333139	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	4	113333139	113333139	C	T	SNP	ALPK1	ENST00000177648	human	ensembl	69_37n	+1	known	missense	c.433	p.P145S	1.000	NULL	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	ALPK1	HGNC	ENSG00000073331	103	0	0.00	110	40	26.67	-	-	-
AP2A1	0	genome.wustl.edu	37	19	50295238	50295238	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	19	50295238	50295238	C	T	SNP	AP2A1	ENST00000359032	human	ensembl	69_37n	+1	known	nonsense	c.520	p.R174*	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP2_complex_asu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a-adaptin_app_sub_C,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP2_complex_asu	-	no_errors	AP2A1	HGNC	ENSG00000196961	32	0	0.00	12	8	38.10	-	-	-
ASB17	0	genome.wustl.edu	37	1	76387978	76387978	+	Silent	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	76387978	76387978	C	T	SNP	ASB17	ENST00000284142	human	ensembl	69_37n	-1	known	silent	c.468	p.Q156	1.000	superfamily_Ankyrin_rpt-contain_dom	pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_SOCS_C,pfscan_SOCS_C	-	no_errors	ASB17	HGNC	ENSG00000154007	87	0	0.00	28	34	54.84	-	-	-
ASXL3	0	genome.wustl.edu	37	18	31325065	31325065	+	Silent	SNP	G	G	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	18	31325065	31325065	G	C	SNP	ASXL3	ENST00000269197	human	ensembl	69_37n	+1	known	silent	c.5253	p.T1751	0.846	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431	80	0	0.00	63	10	13.70	-	-	-
ATXN2L	0	genome.wustl.edu	37	16	28842013	28842013	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	16	28842013	28842013	G	A	SNP	ATXN2L	ENST00000395547	human	ensembl	69_37n	+1	known	missense	c.1112	p.G371D	0.991	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488	50	0	0.00	30	14	31.82	-	-	-
CACNA1G	0	genome.wustl.edu	37	17	48694930	48694930	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	17	48694930	48694930	G	A	SNP	CACNA1G	ENST00000359106	human	ensembl	69_37n	+1	known	missense	c.5153	p.R1718Q	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	29	0	0.00	37	21	36.21	-	-	-
CNDP1	0	genome.wustl.edu	37	18	72244205	72244205	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	18	72244205	72244205	C	G	SNP	CNDP1	ENST00000358821	human	ensembl	69_37n	+1	known	missense	c.943	p.L315V	0.653	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP1	HGNC	ENSG00000150656	276	1	0.36	138	21	13.21	-	-	-
CPT1A	0	genome.wustl.edu	37	11	68530198	68530199	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	11	68530198	68530199	GC	-	DEL	CPT1A	ENST00000265641	human	ensembl	69_37n	-1	known	frame_shift_del	c.1772_1771	p.A591fs	1.000:1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1A	HGNC	ENSG00000110090	49	0	0.00	71	48	40.00	-	-	-
CRYBB1	0	genome.wustl.edu	37	22	27008076	27008076	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	22	27008076	27008076	C	A	SNP	CRYBB1	ENST00000215939	human	ensembl	69_37n	-1	known	missense	c.259	p.G87C	0.997	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBB1	HGNC	ENSG00000100122	230	0	0.00	160	39	19.60	-	-	-
CRYBB1	0	genome.wustl.edu	37	22	27008077	27008077	+	Silent	SNP	A	A	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	22	27008077	27008077	A	G	SNP	CRYBB1	ENST00000215939	human	ensembl	69_37n	-1	known	silent	c.258	p.R86	0.339	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBB1	HGNC	ENSG00000100122	227	0	0.00	161	38	19.10	-	-	-
EGFLAM	0	genome.wustl.edu	37	5	38407032	38407032	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	38407032	38407032	C	G	SNP	EGFLAM	ENST00000354891	human	ensembl	69_37n	+1	known	missense	c.931	p.P311A	0.002	NULL	pfam_Laminin_G,pfam_Fibronectin_type3,pfam_EGF-like_dom,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Laminin_G	-	no_errors	EGFLAM	HGNC	ENSG00000164318	127	0	0.00	136	28	17.07	-	-	-
ERCC5	0	genome.wustl.edu	37	13	103504559	103504559	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	13	103504559	103504559	T	G	SNP	ERCC5	ENST00000355739	human	ensembl	69_37n	+1	known	missense	c.180	p.H60Q	1.000	pfam_XPG_DNA_repair_N,smart_XPG_DNA_repair_N,prints_XPGC_DNA_repair,tigrfam_XPGC_DNA_repair	pfam_XPG_DNA_repair_N,pfam_XPG/RAD2_endonuclease,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG/RAD2_endonuclease,smart_HhH2,prints_XPGC_DNA_repair,prints_XPGC_Rad_DNA_repair,tigrfam_XPGC_DNA_repair	-	no_errors	ERCC5	HGNC	ENSG00000134899	259	0	0.00	123	42	25.30	-	-	-
ESRRG	0	genome.wustl.edu	37	1	216737742	216737742	+	Silent	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	216737742	216737742	C	T	SNP	ESRRG	ENST00000391890	human	ensembl	69_37n	-1	known	silent	c.633	p.L211	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	ESRRG	HGNC	ENSG00000196482	97	0	0.00	81	40	33.06	-	-	-
FAM171A1	0	genome.wustl.edu	37	10	15256542	15256543	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	10	15256542	15256543	-	TG	INS	FAM171A1	ENST00000378116	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1045_1044	p.E348fs	0.999:0.486	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468	59	0	0.00	54	59	52.21	-	-	-
FAT2	0	genome.wustl.edu	37	5	150947878	150947878	+	Silent	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	150947878	150947878	C	T	SNP	FAT2	ENST00000261800	human	ensembl	69_37n	-1	known	silent	c.615	p.V205	0.622	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	79	0	0.00	72	25	25.77	-	-	-
FBXO8	0	genome.wustl.edu	37	4	175184103	175184103	+	Silent	SNP	G	G	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	4	175184103	175184103	G	T	SNP	FBXO8	ENST00000393674	human	ensembl	69_37n	-1	known	silent	c.141	p.V47	1.000	NULL	pfam_Sec7,superfamily_Sec7,superfamily_F-box_dom_cyclin-like,smart_Sec7,pfscan_F-box_dom_cyclin-like,pfscan_Sec7	-	no_errors	FBXO8	HGNC	ENSG00000164117	214	0	0.00	138	64	31.68	-	-	-
FRG1B	0	genome.wustl.edu	37	20	29612363	29612363	+	RNA	SNP	G	G	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	20	29612363	29612363	G	C	SNP	FRG1B	ENST00000482423	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FRG1B	HGNC	ENSG00000149531	12	0	0.00	4	4	50.00	-	-	-
GADL1	0	genome.wustl.edu	37	3	30769808	30769808	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	3	30769808	30769808	T	A	SNP	GADL1	ENST00000282538	human	ensembl	69_37n	-1	known	missense	c.1492	p.I498F	1.000	superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	GADL1	HGNC	ENSG00000144644	142	0	0.00	74	41	35.34	-	-	-
HELZ	0	genome.wustl.edu	37	17	65074482	65074482	+	Silent	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	17	65074482	65074482	C	T	SNP	HELZ	ENST00000358691	human	ensembl	69_37n	-1	known	silent	c.5715	p.K1905	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	HELZ	HGNC	ENSG00000198265	102	1	0.96	143	19	11.59	-	-	-
HKDC1	0	genome.wustl.edu	37	10	70992551	70992552	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	10	70992551	70992552	-	G	INS	HKDC1	ENST00000354624	human	ensembl	69_37n	+1	known	frame_shift_ins	c.258_259	p.S87fs	0.996:1.000	pfam_Hexokinase_N	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HKDC1	HGNC	ENSG00000156510	80	0	0.00	40	7	14.89	-	-	-
HMCN1	0	genome.wustl.edu	37	1	185964013	185964013	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	185964013	185964013	C	T	SNP	HMCN1	ENST00000271588	human	ensembl	69_37n	+1	known	missense	c.3572	p.P1191L	0.970	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd,pfam_Thrombospondin_1_rpt,superfamily_Green_fluorescent_prot-like,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	HMCN1	HGNC	ENSG00000143341	117	0	0.00	99	13	11.61	-	-	-
HMCN1	0	genome.wustl.edu	37	1	185985185	185985185	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	185985185	185985185	C	A	SNP	HMCN1	ENST00000271588	human	ensembl	69_37n	+1	known	missense	c.5005	p.P1669T	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd,pfam_Thrombospondin_1_rpt,superfamily_Green_fluorescent_prot-like,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	HMCN1	HGNC	ENSG00000143341	123	0	0.00	125	15	10.71	-	-	-
IDI1	0	genome.wustl.edu	37	10	1087317	1087317	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	10	1087317	1087317	G	T	SNP	IDI1	ENST00000381344	human	ensembl	69_37n	-1	known	missense	c.665	p.P222H	1.000	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	-	no_errors	IDI1	HGNC	ENSG00000067064	147	0	0.00	88	19	17.76	-	-	-
LRPPRC	0	genome.wustl.edu	37	2	44176743	44176743	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	2	44176743	44176743	G	A	SNP	LRPPRC	ENST00000260665	human	ensembl	69_37n	-1	known	missense	c.1733	p.T578M	1.000	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095	68	0	0.00	56	8	12.50	-	-	-
LRRC16B	0	genome.wustl.edu	37	14	24525586	24525586	+	Silent	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	14	24525586	24525586	C	T	SNP	LRRC16B	ENST00000342740	human	ensembl	69_37n	+1	known	silent	c.849	p.N283	1.000	smart_Leu-rich_rpt_RNase_inh_sub-typ	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	21	0	0.00	10	7	41.18	-	-	-
MACF1	0	genome.wustl.edu	37	1	39888058	39888058	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	39888058	39888058	G	C	SNP	MACF1	ENST00000317713	human	ensembl	69_37n	+1	known	missense	c.9643	p.E3215Q	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	MACF1	HGNC	ENSG00000127603	148	0	0.00	117	19	13.87	-	-	-
MAN2A2	0	genome.wustl.edu	37	15	91455336	91455338	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	15	91455336	91455338	GAT	-	DEL	MAN2A2	ENST00000360468	human	ensembl	69_37n	+1	known	in_frame_del	c.2173_2175	p.D725in_frame_del	0.996:0.984:0.002	pfam_Glyco_hydro_38_C,superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_38_core,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Glyco_hydro-type_carb-bd,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2A2	HGNC	ENSG00000196547	18	0	0.00	24	30	55.56	-	-	-
MAN2A2	0	genome.wustl.edu	37	15	91455349	91455349	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	15	91455349	91455349	C	-	DEL	MAN2A2	ENST00000360468	human	ensembl	69_37n	+1	known	frame_shift_del	c.2186	p.T729fs	0.757	pfam_Glyco_hydro_38_C,superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_38_core,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Glyco_hydro-type_carb-bd,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2A2	HGNC	ENSG00000196547	21	0	0.00	25	30	54.55	-	-	-
MCRS1	0	genome.wustl.edu	37	12	49956786	49956786	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	49956786	49956786	G	C	SNP	MCRS1	ENST00000357123	human	ensembl	69_37n	-1	known	missense	c.842	p.T281R	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MCRS1	HGNC	ENSG00000187778	14	0	0.00	18	8	30.77	-	-	-
MYH7	0	genome.wustl.edu	37	14	23886884	23886884	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	14	23886884	23886884	G	A	SNP	MYH7	ENST00000355349	human	ensembl	69_37n	-1	known	missense	c.4181	p.A1394V	1.000	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	36	0	0.00	28	31	52.54	-	-	-
MYT1L	0	genome.wustl.edu	37	2	1812867	1812867	+	Silent	SNP	G	G	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	2	1812867	1812867	G	A	SNP	MYT1L	ENST00000399161	human	ensembl	69_37n	-1	known	silent	c.3153	p.I1051	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	65	0	0.00	72	16	17.98	-	-	-
NBR1	0	genome.wustl.edu	37	17	41355736	41355737	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	17	41355736	41355737	-	G	INS	NBR1	ENST00000341165	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2660_2661	p.A889fs	1.000:0.968	NULL	pfam_OPR_PB1,pfam_Znf_ZZ,superfamily_UBA-like,smart_OPR_PB1,smart_Znf_ZZ,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_ZZ	-	no_errors	NBR1	HGNC	ENSG00000188554	12	0	0.00	8	2	20.00	-	-	-
NUP210L	0	genome.wustl.edu	37	1	153991518	153991518	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	153991518	153991518	G	C	SNP	NUP210L	ENST00000368559	human	ensembl	69_37n	-1	known	missense	c.4544	p.A1515G	0.049	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	127	0	0.00	106	17	13.82	-	-	-
PCDH10	0	genome.wustl.edu	37	4	134072575	134072575	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	4	134072575	134072575	A	-	DEL	PCDH10	ENST00000264360	human	ensembl	69_37n	+1	known	frame_shift_del	c.1280	p.D427fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	111	0	0.00	114	16	11.11	-	-	-
PCDHB6	0	genome.wustl.edu	37	5	140530844	140530844	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	140530844	140530844	C	G	SNP	PCDHB6	ENST00000231136	human	ensembl	69_37n	+1	known	missense	c.1006	p.L336V	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211	215	0	0.00	150	43	22.16	-	-	-
PCDHGB4	0	genome.wustl.edu	37	5	140769020	140769020	+	Silent	SNP	G	G	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	140769020	140769020	G	T	SNP	PCDHGB4	ENST00000519479	human	ensembl	69_37n	+1	known	silent	c.1569	p.L523	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB4	HGNC	ENSG00000253953	44	0	0.00	55	11	16.67	-	-	-
PLA2R1	0	genome.wustl.edu	37	2	160885378	160885378	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	2	160885378	160885378	T	C	SNP	PLA2R1	ENST00000283243	human	ensembl	69_37n	-1	known	missense	c.938	p.Y313C	0.016	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	PLA2R1	HGNC	ENSG00000153246	65	0	0.00	51	8	13.56	-	-	-
PPEF1	0	genome.wustl.edu	37	X	18822016	18822016	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	X	18822016	18822016	G	C	SNP	PPEF1	ENST00000361511	human	ensembl	69_37n	+1	known	missense	c.1072	p.D358H	0.958	pfam_Metallo_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,pirsf_Ser/Thr-Pase_EF-hand_contain,prints_Ser/Thr-sp_prot-phosphatase	pfam_Metallo_PEstase_dom,pfam_EF-hand,pfam_PPP_dom,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,smart_Ser/Thr-sp_prot-phosphatase,smart_EF_hand_Ca-bd,pirsf_Ser/Thr-Pase_EF-hand_contain,pfscan_EF_HAND_2,pfscan_IQ_motif_EF-hand-BS,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPEF1	HGNC	ENSG00000086717	231	0	0.00	116	23	16.55	-	-	-
PRKCQ	0	genome.wustl.edu	37	10	6472861	6472861	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	10	6472861	6472861	C	T	SNP	PRKCQ	ENST00000263125	human	ensembl	69_37n	-1	known	missense	c.1876	p.G626R	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Prot_kin_PKC_delta,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675	87	0	0.00	49	15	23.44	-	-	-
PRMT5	0	genome.wustl.edu	37	14	23391766	23391766	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	14	23391766	23391766	G	A	SNP	PRMT5	ENST00000324366	human	ensembl	69_37n	-1	known	missense	c.1582	p.P528S	1.000	pfam_Arg_MeTrfase,pirsf_Arg_MeTrfase_PRMT5	pfam_Arg_MeTrfase,pirsf_Arg_MeTrfase_PRMT5	-	no_errors	PRMT5	HGNC	ENSG00000100462	442	0	0.00	277	48	14.77	-	-	-
ROBO2	0	genome.wustl.edu	37	3	77571962	77571962	+	Silent	SNP	A	A	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	3	77571962	77571962	A	G	SNP	ROBO2	ENST00000461745	human	ensembl	69_37n	+1	known	silent	c.843	p.K281	0.935	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	ROBO2	HGNC	ENSG00000185008	342	0	0.00	148	55	26.96	-	-	-
RPGR	0	genome.wustl.edu	37	X	38160625	38160625	+	Splice_Site	SNP	C	C	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	X	38160625	38160625	C	A	SNP	RPGR	ENST00000378505	human	ensembl	69_37n	-1	known	splice_site	c.935-1	e9-1	1.000	-	-	-	no_errors	RPGR	HGNC	ENSG00000156313	85	0	0.00	55	7	11.29	-	-	-
RXRB	0	genome.wustl.edu	37	6	33166204	33166204	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	6	33166204	33166204	C	-	DEL	RXRB	ENST00000374680	human	ensembl	69_37n	-1	known	frame_shift_del	c.521	p.G174fs	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	RXRB	HGNC	ENSG00000204231	92	0	0.00	67	22	24.18	-	-	-
SART1	0	genome.wustl.edu	37	11	65746162	65746162	+	Splice_Site	DEL	T	T	-			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	11	65746162	65746162	T	-	DEL	SART1	ENST00000312397	human	ensembl	69_37n	+1	known	splice_site_del	c.2262+2	e18+2	1.000	-	-	-	no_errors	SART1	HGNC	ENSG00000175467	13	0	0.00	13	8	33.33	-	-	-
SEMA5A	0	genome.wustl.edu	37	5	9154711	9154711	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	9154711	9154711	T	A	SNP	SEMA5A	ENST00000382496	human	ensembl	69_37n	-1	known	missense	c.1370	p.E457V	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Thrombospondin_1_rpt,superfamily_Semaphorin/CD100_Ag,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Thrombospondin_1_rpt,pfscan_Semaphorin/CD100_Ag,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902	78	0	0.00	111	21	15.79	-	-	-
SSRP1	0	genome.wustl.edu	37	11	57102000	57102000	+	Silent	SNP	G	G	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	11	57102000	57102000	G	A	SNP	SSRP1	ENST00000278412	human	ensembl	69_37n	-1	known	silent	c.177	p.G59	0.993	NULL	pfam_SSRP1_dom,pfam_DUF1747,pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily,prints_SSrcognition	-	no_errors	SSRP1	HGNC	ENSG00000149136	129	0	0.00	112	23	17.04	-	-	-
ST18	0	genome.wustl.edu	37	8	53030972	53030972	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	8	53030972	53030972	A	T	SNP	ST18	ENST00000276480	human	ensembl	69_37n	-1	known	missense	c.2785	p.L929M	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488	114	0	0.00	101	12	10.53	-	-	-
TCP11	0	genome.wustl.edu	37	6	35108559	35108560	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	6	35108559	35108560	-	G	INS	TCP11	ENST00000311875	human	ensembl	69_37n	-1	known	frame_shift_ins	c.128_127	p.Q43fs	0.000:0.004	NULL	pfam_Tcp11	-	no_errors	TCP11	HGNC	ENSG00000124678	18	0	0.00	10	3	23.08	-	-	-
TLR7	0	genome.wustl.edu	37	X	12905642	12905642	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	X	12905642	12905642	G	A	SNP	TLR7	ENST00000380659	human	ensembl	69_37n	+1	known	missense	c.2015	p.G672D	0.528	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_TIR_dom,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR7	HGNC	ENSG00000196664	498	1	0.20	181	116	38.80	-	-	-
TNIK	0	genome.wustl.edu	37	3	170819279	170819279	+	Silent	SNP	G	G	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	3	170819279	170819279	G	T	SNP	TNIK	ENST00000436636	human	ensembl	69_37n	-1	known	silent	c.2550	p.T850	0.940	NULL	pfam_Prot_kinase_cat_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_cat_dom	-	no_errors	TNIK	HGNC	ENSG00000154310	434	0	0.00	369	85	18.64	-	-	-
TP53	0	genome.wustl.edu	37	17	7578525	7578525	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	17	7578525	7578525	G	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.405	p.C135W	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	83	0	0.00	24	53	68.83	-	-	-
TTC5	0	genome.wustl.edu	37	14	20764583	20764583	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	14	20764583	20764583	G	C	SNP	TTC5	ENST00000258821	human	ensembl	69_37n	-1	known	missense	c.662	p.S221C	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC5	HGNC	ENSG00000136319	319	0	0.00	117	46	28.22	-	-	-
UACA	0	genome.wustl.edu	37	15	70949465	70949465	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	15	70949465	70949465	C	A	SNP	UACA	ENST00000322954	human	ensembl	69_37n	-1	known	missense	c.4181	p.G1394V	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Prefoldin,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_T_SNARE_dom,prints_Ankyrin_rpt	-	no_errors	UACA	HGNC	ENSG00000137831	154	0	0.00	60	15	20.00	-	-	-
UNC5D	0	genome.wustl.edu	37	8	35563480	35563480	+	Splice_Site	SNP	G	G	T			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	8	35563480	35563480	G	T	SNP	UNC5D	ENST00000404895	human	ensembl	69_37n	+1	known	splice_site	c.1117+1	e8+1	1.000	-	-	-	no_errors	UNC5D	HGNC	ENSG00000156687	62	0	0.00	51	44	46.32	-	-	-
USH2A	0	genome.wustl.edu	37	1	216390881	216390881	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	216390881	216390881	C	G	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.3005	p.C1002S	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	101	1	0.98	95	14	12.84	-	-	-
ZNF320	0	genome.wustl.edu	37	19	53384808	53384808	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	19	53384808	53384808	A	G	SNP	ZNF320	ENST00000391781	human	ensembl	69_37n	-1	known	missense	c.571	p.C191R	0.802	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF320	HGNC	ENSG00000182986	300	0	0.00	287	60	17.29	-	-	-
ZNF540	0	genome.wustl.edu	37	19	38103478	38103478	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	19	38103478	38103478	C	A	SNP	ZNF540	ENST00000316433	human	ensembl	69_37n	+1	known	missense	c.1297	p.H433N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF540	HGNC	ENSG00000171817	184	0	0.00	82	80	49.38	-	-	-
