Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACYP1	0	genome.wustl.edu	37	14	75520314	75520314	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	75520314	75520314	G	A	SNP	ACYP1	ENST00000238618	human	ensembl	69_37n	-1	known	missense	c.133	p.R45W	0.994	pfam_Acylphosphatase-like,superfamily_Acylphosphatase-like,prints_Acylphosphatase,pfscan_Acylphosphatase-like	pfam_Acylphosphatase-like,superfamily_Acylphosphatase-like,prints_Acylphosphatase,pfscan_Acylphosphatase-like	-	no_errors	ACYP1	HGNC	ENSG00000119640	291	1	0.34	267	36	11.88	-	-	-
AIDA	0	genome.wustl.edu	37	1	222876531	222876531	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	1	222876531	222876531	G	A	SNP	AIDA	ENST00000340020	human	ensembl	69_37n	-1	known	nonsense	c.139	p.Q47*	1.000	pfam_AIDA,superfamily_AIDA_N	pfam_AIDA,superfamily_AIDA_N	-	no_errors	AIDA	HGNC	ENSG00000186063	553	0	0.00	721	219	23.20	-	-	-
AKR1B1	0	genome.wustl.edu	37	7	134135680	134135680	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	7	134135680	134135680	A	T	SNP	AKR1B1	ENST00000426422	human	ensembl	69_37n	-1	known	missense	c.264	p.D88E	0.000	NULL	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	-	no_errors	AKR1B1	HGNC	ENSG00000085662	68	0	0.00	14	26	65.00	-	-	-
ANKH	0	genome.wustl.edu	37	5	14758638	14758638	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	5	14758638	14758638	G	A	SNP	ANKH	ENST00000284268	human	ensembl	69_37n	-1	known	missense	c.383	p.T128M	1.000	pfam_ANKH	pfam_ANKH	-	no_errors	ANKH	HGNC	ENSG00000154122	255	0	0.00	284	38	11.76	-	-	-
APOBEC3G	0	genome.wustl.edu	37	22	39475005	39475005	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	22	39475005	39475005	G	A	SNP	APOBEC3G	ENST00000407997	human	ensembl	69_37n	+1	known	missense	c.86	p.R29H	0.000	pfam_APOBEC_N	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC3G	HGNC	ENSG00000239713	238	0	0.00	17	84	83.17	-	-	-
ARHGAP36	0	genome.wustl.edu	37	X	130218365	130218365	+	Silent	SNP	A	A	G			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	X	130218365	130218365	A	G	SNP	ARHGAP36	ENST00000276211	human	ensembl	69_37n	+1	known	silent	c.732	p.Q244	0.004	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP36	HGNC	ENSG00000147256	134	0	0.00	68	15	17.86	-	-	-
ASH1L	0	genome.wustl.edu	37	1	155450526	155450527	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	1	155450526	155450527	-	T	INS	ASH1L	ENST00000368346	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2135_2134	p.R712fs	1.000:1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539	111	0	0.00	186	22	10.58	-	-	-
ATG2B	0	genome.wustl.edu	37	14	96792113	96792113	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	96792113	96792113	C	G	SNP	ATG2B	ENST00000359933	human	ensembl	69_37n	-1	known	missense	c.2310	p.W770C	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2B	HGNC	ENSG00000066739	259	0	0.00	147	122	45.35	-	-	-
C14orf80	0	genome.wustl.edu	37	14	105958575	105958575	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	105958575	105958575	C	G	SNP	C14orf80	ENST00000392523	human	ensembl	69_37n	+1	known	missense	c.358	p.R120G	0.002	NULL	NULL	-	no_errors	C14orf80	HGNC	ENSG00000185347	69	0	0.00	26	18	40.91	-	-	-
CCDC19	0	genome.wustl.edu	37	1	159846491	159846491	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	1	159846491	159846491	G	A	SNP	CCDC19	ENST00000368099	human	ensembl	69_37n	-1	known	missense	c.1207	p.R403C	1.000	NULL	NULL	-	no_errors	CCDC19	HGNC	ENSG00000213085	222	0	0.00	296	59	16.57	-	-	-
CDH26	0	genome.wustl.edu	37	20	58563973	58563973	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	20	58563973	58563973	G	C	SNP	CDH26	ENST00000244047	human	ensembl	69_37n	+1	known	missense	c.1038	p.E346D	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	95	0	0.00	96	35	26.52	-	-	-
CNOT3	0	genome.wustl.edu	37	19	54647208	54647208	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	19	54647208	54647208	G	A	SNP	CNOT3	ENST00000221232	human	ensembl	69_37n	+1	known	missense	c.124	p.E42K	1.000	pfam_Not_N,pirsf_CCR4-NOT_su3/5	pfam_Not_N,pfam_NOT,pirsf_CCR4-NOT_su3/5	-	no_errors	CNOT3	HGNC	ENSG00000088038	125	0	0.00	100	21	17.36	-	-	-
EEF1A1	0	genome.wustl.edu	37	6	74227940	74227940	+	Silent	SNP	A	A	C			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	6	74227940	74227940	A	C	SNP	EEF1A1	ENST00000309268	human	ensembl	69_37n	-1	known	silent	c.1077	p.P359	1.000	pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C,tigrfam_Transl_elong_EF1A_euk/arc	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_ProtSyn_GTP-bd,tigrfam_Transl_elong_EF1A_euk/arc	-	no_errors	EEF1A1	HGNC	ENSG00000156508	103	1	0.96	51	6	10.53	-	-	-
EHMT1	0	genome.wustl.edu	37	9	140672361	140672361	+	Silent	SNP	C	C	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	9	140672361	140672361	C	T	SNP	EHMT1	ENST00000460843	human	ensembl	69_37n	+1	known	silent	c.2046	p.D682	0.201	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT1	HGNC	ENSG00000181090	62	0	0.00	39	7	15.22	-	-	-
EIF3A	0	genome.wustl.edu	37	10	120795555	120795555	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	10	120795555	120795555	C	T	SNP	EIF3A	ENST00000369144	human	ensembl	69_37n	-1	known	missense	c.4145	p.R1382H	1.000	NULL	pfam_PCI_dom,smart_PCI_dom	-	no_errors	EIF3A	HGNC	ENSG00000107581	234	0	0.00	220	39	15.06	-	-	-
FAM127B	0	genome.wustl.edu	37	X	134185956	134185956	+	Silent	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	X	134185956	134185956	G	A	SNP	FAM127B	ENST00000370775	human	ensembl	69_37n	-1	known	silent	c.183	p.D61	0.304	NULL	NULL	-	no_errors	FAM127B	HGNC	ENSG00000203950	126	0	0.00	53	15	22.06	-	-	-
FAM169A	0	genome.wustl.edu	37	5	74078857	74078857	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	5	74078857	74078857	C	A	SNP	FAM169A	ENST00000389156	human	ensembl	69_37n	-1	known	nonsense	c.1363	p.E455*	1.000	NULL	NULL	-	no_errors	FAM169A	HGNC	ENSG00000198780	146	0	0.00	186	30	13.89	-	-	-
FAM98A	0	genome.wustl.edu	37	2	33809886	33809886	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	2	33809886	33809886	T	G	SNP	FAM98A	ENST00000238823	human	ensembl	69_37n	-1	known	missense	c.1514	p.Y505S	1.000	NULL	pfam_Uncharacterised_FAM98	-	no_errors	FAM98A	HGNC	ENSG00000119812	292	0	0.00	155	120	43.48	-	-	-
FER	0	genome.wustl.edu	37	5	108290582	108290582	+	Silent	SNP	T	T	C			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	5	108290582	108290582	T	C	SNP	FER	ENST00000281092	human	ensembl	69_37n	+1	known	silent	c.1482	p.L494	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_FCH,superfamily_Kinase-like_dom,smart_FCH,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FCH,pfscan_SH2,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	FER	HGNC	ENSG00000151422	195	0	0.00	222	31	12.20	-	-	-
GRIK1	0	genome.wustl.edu	37	21	30934056	30934056	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	21	30934056	30934056	C	T	SNP	GRIK1	ENST00000535441	human	ensembl	69_37n	-1	known	missense	c.2251	p.A751T	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK1	HGNC	ENSG00000171189	289	1	0.34	138	81	36.99	-	-	-
JMJD1C	0	genome.wustl.edu	37	10	64974081	64974081	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	10	64974081	64974081	G	A	SNP	JMJD1C	ENST00000399262	human	ensembl	69_37n	-1	known	nonsense	c.1846	p.R616*	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988	211	0	0.00	113	105	47.95	-	-	-
MEOX2	0	genome.wustl.edu	37	7	15652133	15652133	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	7	15652133	15652133	C	T	SNP	MEOX2	ENST00000262041	human	ensembl	69_37n	-1	known	missense	c.794	p.G265E	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	MEOX2	HGNC	ENSG00000106511	256	0	0.00	121	143	53.76	-	-	-
MUC16	0	genome.wustl.edu	37	19	9062672	9062672	+	Silent	SNP	G	G	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	19	9062672	9062672	G	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	silent	c.24774	p.S8258	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	172	0	0.00	50	20	28.57	-	-	-
MYADML	0	genome.wustl.edu	37	2	33952282	33952282	+	RNA	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	2	33952282	33952282	G	A	SNP	MYADML	ENST00000474610	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.810	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649	37	0	0.00	17	4	19.05	-	-	-
MYBBP1A	0	genome.wustl.edu	37	17	4442756	4442756	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	17	4442756	4442756	C	T	SNP	MYBBP1A	ENST00000381556	human	ensembl	69_37n	-1	known	missense	c.3941	p.S1314N	0.000	NULL	pfam_DNA_pol_V,superfamily_ARM-type_fold	-	no_errors	MYBBP1A	HGNC	ENSG00000132382	105	1	0.94	53	6	10.17	-	-	-
MYRIP	0	genome.wustl.edu	37	3	40192554	40192554	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	3	40192554	40192554	A	T	SNP	MYRIP	ENST00000302541	human	ensembl	69_37n	+1	known	missense	c.348	p.Q116H	1.000	superfamily_Znf_FYVE_PHD,pfscan_Rab-bd_domain	pfam_Myelin-assoc_OBP,superfamily_Znf_FYVE_PHD,pfscan_Rab-bd_domain	-	no_errors	MYRIP	HGNC	ENSG00000170011	90	0	0.00	53	9	14.29	-	-	-
NEK6	0	genome.wustl.edu	37	9	127089686	127089686	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	9	127089686	127089686	G	A	SNP	NEK6	ENST00000373600	human	ensembl	69_37n	+1	known	missense	c.686	p.R229H	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK6	HGNC	ENSG00000119408	193	0	0.00	92	39	29.55	-	-	-
NEK9	0	genome.wustl.edu	37	14	75551376	75551376	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	75551376	75551376	G	A	SNP	NEK9	ENST00000238616	human	ensembl	69_37n	-1	known	missense	c.2831	p.S944F	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK9	HGNC	ENSG00000119638	276	1	0.36	222	56	20.07	-	-	-
OR2T3	0	genome.wustl.edu	37	1	248637260	248637260	+	Silent	SNP	C	C	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	1	248637260	248637260	C	A	SNP	OR2T3	ENST00000359594	human	ensembl	69_37n	+1	known	silent	c.609	p.L203	0.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2T3	HGNC	ENSG00000196539	359	0	0.00	411	70	14.49	-	-	-
OXGR1	0	genome.wustl.edu	37	13	97639726	97639726	+	Silent	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	13	97639726	97639726	G	A	SNP	OXGR1	ENST00000298440	human	ensembl	69_37n	-1	known	silent	c.288	p.G96	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	OXGR1	HGNC	ENSG00000165621	178	1	0.56	46	54	53.47	-	-	-
PER1	0	genome.wustl.edu	37	17	8047052	8047054	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	17	8047052	8047054	CCA	-	DEL	PER1	ENST00000317276	human	ensembl	69_37n	-1	known	in_frame_del	c.2604_2602	p.W868in_frame_del	1.000:1.000:0.998	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,smart_PAS,pfscan_PAS	-	no_errors	PER1	HGNC	ENSG00000179094	31	0	0.00	3	2	33.33	-	-	-
PIWIL2	0	genome.wustl.edu	37	8	22136963	22136963	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	8	22136963	22136963	G	A	SNP	PIWIL2	ENST00000356766	human	ensembl	69_37n	+1	known	missense	c.64	p.V22I	0.048	NULL	pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL2	HGNC	ENSG00000197181	139	0	0.00	49	20	28.57	-	-	-
PLIN1	0	genome.wustl.edu	37	15	90212738	90212738	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	15	90212738	90212738	A	T	SNP	PLIN1	ENST00000300055	human	ensembl	69_37n	-1	known	missense	c.764	p.V255E	0.933	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN1	HGNC	ENSG00000166819	44	0	0.00	30	4	11.76	-	-	-
PLXDC2	0	genome.wustl.edu	37	10	20357104	20357104	+	Silent	SNP	G	G	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	10	20357104	20357104	G	T	SNP	PLXDC2	ENST00000377252	human	ensembl	69_37n	+1	known	silent	c.477	p.V159	1.000	NULL	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like	-	no_errors	PLXDC2	HGNC	ENSG00000120594	270	0	0.00	173	113	39.51	-	-	-
RCOR2	0	genome.wustl.edu	37	11	63683048	63683048	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	11	63683048	63683048	C	A	SNP	RCOR2	ENST00000301459	human	ensembl	69_37n	-1	known	missense	c.163	p.V55L	0.931	pfam_ELM2_dom,pfscan_ELM2_dom	pfam_SANT/Myb,pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	RCOR2	HGNC	ENSG00000167771	30	0	0.00	18	7	28.00	-	-	-
ROR2	0	genome.wustl.edu	37	9	94487328	94487328	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	9	94487328	94487328	C	T	SNP	ROR2	ENST00000375708	human	ensembl	69_37n	-1	known	missense	c.1448	p.R483Q	0.981	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	ROR2	HGNC	ENSG00000169071	127	0	0.00	50	31	37.35	-	-	-
SDR39U1	0	genome.wustl.edu	37	14	24910979	24910980	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	24910979	24910980	-	T	INS	SDR39U1	ENST00000399395	human	ensembl	69_37n	-1	known	frame_shift_ins	c.229_228	p.E76fs	1.000:0.994	pfam_Epimerase_deHydtase,tigrfam_Sugar_nucleotide_Epase_put	pfam_DUF1731_C,pfam_Epimerase_deHydtase,tigrfam_Sugar_nucleotide_Epase_put	-	no_errors	SDR39U1	HGNC	ENSG00000100445	200	0	0.00	164	39	19.21	-	-	-
SNORD42B	0	genome.wustl.edu	37	17	27047625	27047625	+	RNA	SNP	A	A	G			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	17	27047625	27047625	A	G	SNP	SNORD42B	ENST00000458893	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.944	-	-	-	no_errors	SNORD42B	HGNC	ENSG00000238423	374	0	0.00	307	127	29.20	-	-	-
TMEM132D	0	genome.wustl.edu	37	12	129559467	129559467	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	12	129559467	129559467	G	T	SNP	TMEM132D	ENST00000422113	human	ensembl	69_37n	-1	known	missense	c.2253	p.F751L	0.882	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952	198	0	0.00	123	28	18.42	-	-	-
TRPC7	0	genome.wustl.edu	37	5	135587470	135587470	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	5	135587470	135587470	G	A	SNP	TRPC7	ENST00000502753	human	ensembl	69_37n	-1	novel	missense	c.1279	p.R427C	0.992	pfam_Ion_trans_dom,pfam_PKD1_2_channel,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	TRPC7	HGNC	ENSG00000069018	68	0	0.00	36	40	52.63	-	-	-
ZNF391	0	genome.wustl.edu	37	6	27368399	27368399	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	6	27368399	27368399	C	G	SNP	ZNF391	ENST00000244576	human	ensembl	69_37n	+1	known	missense	c.250	p.P84A	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF391	HGNC	ENSG00000124613	125	0	0.00	141	24	14.55	-	-	-
