Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ASTN1	0	genome.wustl.edu	37	1	176913118	176913118	+	Silent	SNP	C	C	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	1	176913118	176913118	C	A	SNP	ASTN1	ENST00000367654	human	ensembl	69_37n	-1	known	silent	c.2310	p.L770	1.000	NULL	superfamily_Fibronectin_type3,smart_EGF-like,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092	88	0	0.00	86	43	33.08	-	-	-
BRCC3	0	genome.wustl.edu	37	X	154317544	154317544	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	X	154317544	154317544	G	A	SNP	BRCC3	ENST00000399042	human	ensembl	69_37n	+1	known	missense	c.410	p.R137H	1.000	pfam_JAB1_Mov34_MPN_PAD1,smart_JAB1_Mov34_MPN_PAD1	pfam_JAB1_Mov34_MPN_PAD1,smart_JAB1_Mov34_MPN_PAD1	-	no_errors	BRCC3	HGNC	ENSG00000185515	165	0	0.00	164	31	15.90	-	-	-
CAPN14	0	genome.wustl.edu	37	2	31412212	31412212	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	31412212	31412212	C	T	SNP	CAPN14	ENST00000444918	human	ensembl	69_37n	-1	known	missense	c.1420	p.V474M	0.995	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_HAND_2,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN14	HGNC	ENSG00000214711	95	0	0.00	94	58	38.16	-	-	-
CCDC91	0	genome.wustl.edu	37	12	28459679	28459679	+	Missense_Mutation	SNP	A	A	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	12	28459679	28459679	A	C	SNP	CCDC91	ENST00000381259	human	ensembl	69_37n	+1	known	missense	c.272	p.Q91P	1.000	NULL	NULL	-	no_errors	CCDC91	HGNC	ENSG00000123106	98	0	0.00	95	22	18.80	-	-	-
CFP	0	genome.wustl.edu	37	X	47489181	47489181	+	Silent	SNP	G	G	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	X	47489181	47489181	G	C	SNP	CFP	ENST00000247153	human	ensembl	69_37n	-1	known	silent	c.63	p.T21	0.162	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	CFP	HGNC	ENSG00000126759	17	0	0.00	23	9	28.12	-	-	-
CRKL	0	genome.wustl.edu	37	22	21272296	21272296	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	22	21272296	21272296	A	G	SNP	CRKL	ENST00000354336	human	ensembl	69_37n	+1	known	missense	c.74	p.Q25R	1.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_SH3_2,pfam_SH2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH2,smart_SH3_domain,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	CRKL	HGNC	ENSG00000099942	23	0	0.00	8	13	61.90	-	-	-
DBN1	0	genome.wustl.edu	37	5	176885058	176885058	+	Splice_Site	SNP	C	C	G			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	5	176885058	176885058	C	G	SNP	DBN1	ENST00000292385	human	ensembl	69_37n	-1	known	splice_site	c.1782+1	e12+1	1.000	-	-	-	no_errors	DBN1	HGNC	ENSG00000113758	16	0	0.00	3	7	70.00	-	-	-
DCUN1D2	0	genome.wustl.edu	37	13	114128499	114128499	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	13	114128499	114128499	A	G	SNP	DCUN1D2	ENST00000478244	human	ensembl	69_37n	-1	known	missense	c.460	p.F154L	1.000	pfam_PONY_dom	pfam_PONY_dom,superfamily_UBA-like	-	no_errors	DCUN1D2	HGNC	ENSG00000150401	125	1	0.79	144	40	21.74	-	-	-
DNAH14	0	genome.wustl.edu	37	1	225568025	225568025	+	Splice_Site	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	1	225568025	225568025	G	A	SNP	DNAH14	ENST00000430092	human	ensembl	69_37n	+1	known	splice_site	c.12574+1	e77+1	1.000	-	-	-	no_errors	DNAH14	HGNC	ENSG00000185842	109	0	0.00	162	31	16.06	-	-	-
DUSP27	0	genome.wustl.edu	37	1	167095568	167095568	+	Silent	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	1	167095568	167095568	C	T	SNP	DUSP27	ENST00000271385	human	ensembl	69_37n	+1	known	silent	c.1200	p.N400	0.988	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842	34	0	0.00	33	20	37.74	-	-	-
ELP2	0	genome.wustl.edu	37	18	33721133	33721133	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	18	33721133	33721133	G	C	SNP	ELP2	ENST00000358232	human	ensembl	69_37n	+1	known	missense	c.557	p.R186T	0.992	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ELP2	HGNC	ENSG00000134759	191	0	0.00	118	36	23.38	-	-	-
GGT3P	0	genome.wustl.edu	37	22	18778675	18778675	+	RNA	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	22	18778675	18778675	C	T	SNP	GGT3P	ENST00000412448	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.913	-	-	-	no_errors	GGT3P	HGNC	ENSG00000197421	26	0	0.00	53	15	22.06	-	-	-
HACE1	0	genome.wustl.edu	37	6	105244542	105244542	+	Silent	SNP	G	G	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	6	105244542	105244542	G	C	SNP	HACE1	ENST00000262903	human	ensembl	69_37n	-1	known	silent	c.804	p.L268	0.198	NULL	pfam_HECT,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT,prints_Ankyrin_rpt	-	no_errors	HACE1	HGNC	ENSG00000085382	195	0	0.00	128	906	87.45	-	-	-
HIST1H3C	0	genome.wustl.edu	37	6	26045726	26045726	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	6	26045726	26045726	G	C	SNP	HIST1H3C	ENST00000540144	human	ensembl	69_37n	+1	known	missense	c.88	p.A30P	1.000	superfamily_Histone-fold,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3C	HGNC	ENSG00000196532	23	0	0.00	35	9	20.45	-	-	-
IGHA1	0	genome.wustl.edu	37	14	106174386	106174386	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	14	106174386	106174386	C	T	SNP	IGHA1	ENST00000390547	human	ensembl	69_37n	-1	known	missense	c.403	p.E135K	0.414	pfscan_Ig-like	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like	-	no_start_codon	IGHA1	HGNC	ENSG00000211895	85	0	0.00	159	36	18.46	-	-	-
ISLR	0	genome.wustl.edu	37	15	74468053	74468053	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	15	74468053	74468053	T	C	SNP	ISLR	ENST00000249842	human	ensembl	69_37n	+1	known	missense	c.854	p.V285A	0.026	pfam_Ig_I-set,smart_Ig_sub2,pfscan_Ig-like	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	ISLR	HGNC	ENSG00000129009	12	0	0.00	24	8	25.00	-	-	-
KIAA0922	0	genome.wustl.edu	37	4	154547305	154547305	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	4	154547305	154547305	G	T	SNP	KIAA0922	ENST00000409959	human	ensembl	69_37n	+1	known	missense	c.4052	p.S1351I	0.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	KIAA0922	HGNC	ENSG00000121210	421	1	0.24	225	93	29.15	-	-	-
KIF4A	0	genome.wustl.edu	37	X	69510350	69510350	+	Silent	SNP	G	G	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	X	69510350	69510350	G	T	SNP	KIF4A	ENST00000374403	human	ensembl	69_37n	+1	known	silent	c.42	p.L14	1.000	smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4A	HGNC	ENSG00000090889	79	0	0.00	131	28	17.50	-	-	-
KIFC2	0	genome.wustl.edu	37	8	145692700	145692700	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	8	145692700	145692700	C	T	SNP	KIFC2	ENST00000301332	human	ensembl	69_37n	+1	known	missense	c.445	p.R149W	0.000	NULL	pfam_Kinesin_motor_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIFC2	HGNC	ENSG00000167702	20	0	0.00	12	8	40.00	-	-	-
LUZP4	0	genome.wustl.edu	37	X	114524334	114524334	+	Silent	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	X	114524334	114524334	G	A	SNP	LUZP4	ENST00000371920	human	ensembl	69_37n	+1	known	silent	c.9	p.S3	0.031	NULL	NULL	-	no_errors	LUZP4	HGNC	ENSG00000102021	89	0	0.00	70	12	14.63	-	-	-
MAGI1	0	genome.wustl.edu	37	3	65342480	65342480	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	3	65342480	65342480	C	T	SNP	MAGI1	ENST00000402939	human	ensembl	69_37n	-1	known	missense	c.3962	p.R1321Q	0.000	NULL	pfam_PDZ,pfam_WW_Rsp5_WWP,pfam_Guanylate_kin,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP,pfscan_Guanylate_kin	-	no_errors	MAGI1	HGNC	ENSG00000151276	70	0	0.00	25	12	32.43	-	-	-
METAP2	0	genome.wustl.edu	37	12	95905673	95905673	+	Nonsense_Mutation	SNP	A	A	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	12	95905673	95905673	A	T	SNP	METAP2	ENST00000323666	human	ensembl	69_37n	+1	known	nonsense	c.967	p.K323*	1.000	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP2	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP2	-	no_errors	METAP2	HGNC	ENSG00000111142	132	0	0.00	287	36	11.11	-	-	-
MYO18B	0	genome.wustl.edu	37	22	26422713	26422713	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	22	26422713	26422713	G	A	SNP	MYO18B	ENST00000335473	human	ensembl	69_37n	+1	known	missense	c.6773	p.R2258Q	1.000	NULL	pfam_Myosin_head_motor_dom,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd_dom,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	16	0	0.00	21	9	30.00	-	-	-
NOX4	0	genome.wustl.edu	37	11	89106652	89106652	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	11	89106652	89106652	A	G	SNP	NOX4	ENST00000529343	human	ensembl	69_37n	-1	known	missense	c.638	p.L213P	1.000	NULL	pfam_Fe3_Rdtase_TM_dom,tigrfam_Znf_LSD1	-	no_errors	NOX4	HGNC	ENSG00000086991	110	0	0.00	41	48	53.93	-	-	-
NRXN3	0	genome.wustl.edu	37	14	79933659	79933659	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	14	79933659	79933659	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	69_37n	+1	known	missense	c.3325	p.V1109M	1.000	superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	43	0	0.00	75	21	21.43	-	-	-
OR4K2	0	genome.wustl.edu	37	14	20345239	20345239	+	Silent	SNP	G	G	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	14	20345239	20345239	G	T	SNP	OR4K2	ENST00000298642	human	ensembl	69_37n	+1	known	silent	c.813	p.L271	0.586	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR4K2	HGNC	ENSG00000165762	175	0	0.00	199	57	22.18	-	-	-
OTOF	0	genome.wustl.edu	37	2	26696148	26696148	+	Nonsense_Mutation	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	26696148	26696148	G	A	SNP	OTOF	ENST00000426958	human	ensembl	69_37n	-1	putative	nonsense	c.151	p.R51*	0.956	superfamily_C2_Ca/lipid-bd_dom_CaLB	superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	OTOF	HGNC	ENSG00000115155	55	0	0.00	58	11	15.94	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	117	0	0.00	70	80	53.33	-	-	-
PSIP1	0	genome.wustl.edu	37	9	15469016	15469016	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	9	15469016	15469016	G	A	SNP	PSIP1	ENST00000380733	human	ensembl	69_37n	-1	known	missense	c.1145	p.S382L	1.000	pfam_LEDGF	pfam_LEDGF,pfam_PWWP,smart_PWWP,prints_Treacle-like_TCS,pfscan_PWWP	-	no_errors	PSIP1	HGNC	ENSG00000164985	133	1	0.75	72	27	27.27	-	-	-
PTCHD3	0	genome.wustl.edu	37	10	27702625	27702625	+	Silent	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	10	27702625	27702625	C	T	SNP	PTCHD3	ENST00000438700	human	ensembl	69_37n	-1	known	silent	c.555	p.V185	0.389	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077	18	0	0.00	40	8	16.67	-	-	-
SPHKAP	0	genome.wustl.edu	37	2	228883499	228883499	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	228883499	228883499	C	A	SNP	SPHKAP	ENST00000392056	human	ensembl	69_37n	-1	known	missense	c.2071	p.D691Y	0.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	227	0	0.00	152	68	30.91	-	-	-
SPRED1	0	genome.wustl.edu	37	15	38591723	38591723	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	15	38591723	38591723	G	A	SNP	SPRED1	ENST00000299084	human	ensembl	69_37n	+1	known	missense	c.182	p.R61H	1.000	pfam_EVH1,smart_EVH1,pfscan_EVH1	pfam_Sprouty,pfam_EVH1,smart_EVH1,pfscan_EVH1	-	no_errors	SPRED1	HGNC	ENSG00000166068	90	0	0.00	61	23	27.38	-	-	-
TMC5	0	genome.wustl.edu	37	16	19481012	19481012	+	Silent	SNP	G	G	A			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	16	19481012	19481012	G	A	SNP	TMC5	ENST00000396229	human	ensembl	69_37n	+1	known	silent	c.1647	p.K549	0.915	NULL	pfam_TMC	-	no_errors	TMC5	HGNC	ENSG00000103534	127	0	0.00	127	32	20.00	-	-	-
TP53	0	genome.wustl.edu	37	17	7578538	7578538	+	Frame_Shift_Del	DEL	T	T	-			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	17	7578538	7578538	T	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_del	c.392	p.N131fs	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	64	0	0.00	33	44	56.41	-	-	-
TRAK2	0	genome.wustl.edu	37	2	202245617	202245617	+	Silent	SNP	G	G	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	202245617	202245617	G	C	SNP	TRAK2	ENST00000332624	human	ensembl	69_37n	-1	known	silent	c.2394	p.L798	0.931	pfam_Traffickng_kinesin-bd_prot_dom	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK2	HGNC	ENSG00000115993	96	0	0.00	65	40	38.10	-	-	-
ULK4P1	0	genome.wustl.edu	37	15	32720492	32720492	+	RNA	SNP	G	G	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	15	32720492	32720492	G	C	SNP	ULK4P1	ENST00000562108	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ULK4P1	HGNC	ENSG00000215304	11	0	0.00	12	5	29.41	-	-	-
WDR33	0	genome.wustl.edu	37	2	128463985	128463985	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	128463985	128463985	C	T	SNP	WDR33	ENST00000322313	human	ensembl	69_37n	-1	known	missense	c.3923	p.R1308Q	1.000	NULL	pfam_WD40_repeat,pfam_Collagen,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR33	HGNC	ENSG00000136709	26	0	0.00	24	10	29.41	-	-	-
XRRA1	0	genome.wustl.edu	37	11	74570222	74570222	+	Missense_Mutation	SNP	A	A	C			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	11	74570222	74570222	A	C	SNP	XRRA1	ENST00000340360	human	ensembl	69_37n	-1	known	missense	c.1127	p.L376R	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	XRRA1	HGNC	ENSG00000166435	80	0	0.00	108	56	33.94	-	-	-
ZKSCAN4	0	genome.wustl.edu	37	6	28214862	28214862	+	Silent	SNP	C	C	T			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	6	28214862	28214862	C	T	SNP	ZKSCAN4	ENST00000377294	human	ensembl	69_37n	-1	known	silent	c.663	p.L221	0.988	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN4	HGNC	ENSG00000187626	77	0	0.00	93	23	19.66	-	-	-
