Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANO1	0	genome.wustl.edu	37	11	70007819	70007819	+	Silent	SNP	C	C	T			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	11	70007819	70007819	C	T	SNP	ANO1	ENST00000355303	human	ensembl	69_37n	+1	known	silent	c.1872	p.Y624	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO1	HGNC	ENSG00000131620	94	0	0.00	103	50	32.26	-	-	-
APOBEC3A	0	genome.wustl.edu	37	22	39357391	39357391	+	Splice_Site	SNP	G	G	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	22	39357391	39357391	G	A	SNP	APOBEC3A	ENST00000249116	human	ensembl	69_37n	+1	known	splice_site	c.175-1	e3-1	0.000	-	-	-	no_errors	APOBEC3A	HGNC	ENSG00000128383	18	0	0.00	6	11	64.71	-	-	-
CACNA1G	0	genome.wustl.edu	37	17	48703503	48703503	+	Silent	SNP	C	C	G			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	17	48703503	48703503	C	G	SNP	CACNA1G	ENST00000359106	human	ensembl	69_37n	+1	known	silent	c.6525	p.T2175	0.958	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	28	0	0.00	18	16	47.06	-	-	-
CACNA1G	0	genome.wustl.edu	37	17	48703604	48703604	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	17	48703604	48703604	C	T	SNP	CACNA1G	ENST00000359106	human	ensembl	69_37n	+1	known	missense	c.6626	p.P2209L	0.014	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	22	0	0.00	26	17	39.53	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16950687	16950687	+	RNA	SNP	G	G	T			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	1	16950687	16950687	G	T	SNP	CROCCP2	ENST00000421700	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	11	0	0.00	18	6	25.00	-	-	-
DNA2	0	genome.wustl.edu	37	10	70231706	70231706	+	Silent	SNP	G	G	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	10	70231706	70231706	G	A	SNP	DNA2	ENST00000399180	human	ensembl	69_37n	-1	known	silent	c.174	p.R58	0.012	NULL	pfam_DNA_replication_fac_Dna2	-	no_errors	DNA2	HGNC	ENSG00000138346	33	0	0.00	16	9	36.00	-	-	-
EP400	0	genome.wustl.edu	37	12	132562209	132562209	+	Silent	SNP	G	G	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	12	132562209	132562209	G	A	SNP	EP400	ENST00000333577	human	ensembl	69_37n	+1	known	silent	c.9471	p.P3157	0.737	NULL	pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495	18	0	0.00	15	8	34.78	-	-	-
FAM78B	0	genome.wustl.edu	37	1	166039779	166039779	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	1	166039779	166039779	C	A	SNP	FAM78B	ENST00000338353	human	ensembl	69_37n	-1	known	missense	c.485	p.R162I	0.997	NULL	NULL	-	no_errors	FAM78B	HGNC	ENSG00000188859	72	0	0.00	121	27	18.24	-	-	-
GATA3	0	genome.wustl.edu	37	10	8111513	8111514	+	Frame_Shift_Ins	INS	-	-	G			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	10	8111513	8111514	-	G	INS	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1002_1003	p.D335fs	0.859:1.000	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	62	0	0.00	96	34	26.15	-	-	-
GRM6	0	genome.wustl.edu	37	5	178418554	178418555	+	Frame_Shift_Ins	INS	-	-	C			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	5	178418554	178418555	-	C	INS	GRM6	ENST00000231188	human	ensembl	69_37n	-1	known	frame_shift_ins	c.728_727	p.V243fs	1.000:0.986	pfam_ANF_lig-bd_rcpt,prints_GPCR_3_mtglu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM6	HGNC	ENSG00000113262	44	0	0.00	43	13	23.21	-	-	-
NACA2	0	genome.wustl.edu	37	17	59668404	59668404	+	Silent	SNP	G	G	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	17	59668404	59668404	G	A	SNP	NACA2	ENST00000521764	human	ensembl	69_37n	-1	known	silent	c.138	p.T46	0.976	pirsf_Nas_poly-pep-assoc_cplx_asu	pfam_Nas_poly-pep-assoc_cplx,superfamily_UBA-like,pirsf_Nas_poly-pep-assoc_cplx_asu,pfscan_Nas_poly-pep-assoc_cplx	-	no_errors	NACA2	HGNC	ENSG00000253506	96	0	0.00	480	58	10.78	-	-	-
NPAS4	0	genome.wustl.edu	37	11	66191476	66191476	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	11	66191476	66191476	G	A	SNP	NPAS4	ENST00000311034	human	ensembl	69_37n	+1	known	missense	c.1115	p.S372N	1.000	NULL	pfam_PAS_fold_3,smart_PAS,pfscan_PAS	-	no_errors	NPAS4	HGNC	ENSG00000174576	24	0	0.00	36	20	35.71	-	-	-
OR8H1	0	genome.wustl.edu	37	11	56058034	56058034	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	11	56058034	56058034	C	T	SNP	OR8H1	ENST00000313022	human	ensembl	69_37n	-1	known	missense	c.505	p.D169N	0.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR8H1	HGNC	ENSG00000181693	49	0	0.00	59	30	33.71	-	-	-
PCDHB6	0	genome.wustl.edu	37	5	140530373	140530373	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	5	140530373	140530373	G	A	SNP	PCDHB6	ENST00000231136	human	ensembl	69_37n	+1	known	missense	c.535	p.V179I	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211	56	0	0.00	42	20	32.26	-	-	-
SCN3A	0	genome.wustl.edu	37	2	165952146	165952146	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	2	165952146	165952146	G	A	SNP	SCN3A	ENST00000283254	human	ensembl	69_37n	-1	known	missense	c.4306	p.P1436S	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN3A	HGNC	ENSG00000153253	65	0	0.00	60	35	36.84	-	-	-
SIRPB1	0	genome.wustl.edu	37	20	1551639	1551639	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	20	1551639	1551639	G	A	SNP	SIRPB1	ENST00000381605	human	ensembl	69_37n	-1	known	missense	c.896	p.S299L	0.000	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	SIRPB1	HGNC	ENSG00000101307	139	0	0.00	165	96	36.64	-	-	-
SLC24A3	0	genome.wustl.edu	37	20	19662508	19662508	+	Silent	SNP	C	C	T			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	20	19662508	19662508	C	T	SNP	SLC24A3	ENST00000328041	human	ensembl	69_37n	+1	known	silent	c.774	p.N258	0.619	tigrfam_K-dep_Na/Ca-exchanger-like	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger-like	-	no_errors	SLC24A3	HGNC	ENSG00000185052	49	0	0.00	42	25	37.31	-	-	-
SNUPN	0	genome.wustl.edu	37	15	75901960	75901960	+	Nonsense_Mutation	SNP	G	G	T			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	15	75901960	75901960	G	T	SNP	SNUPN	ENST00000371091	human	ensembl	69_37n	-1	known	nonsense	c.567	p.Y189*	1.000	pirsf_Snurportin-1	pfam_Snurportin-1_N,pirsf_Snurportin-1,pfscan_Importin-a_IBB	-	no_errors	SNUPN	HGNC	ENSG00000169371	62	0	0.00	72	19	20.88	-	-	-
TTC7B	0	genome.wustl.edu	37	14	91077095	91077095	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	14	91077095	91077095	G	T	SNP	TTC7B	ENST00000357056	human	ensembl	69_37n	-1	known	missense	c.1957	p.P653T	1.000	NULL	pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC7B	HGNC	ENSG00000165914	92	0	0.00	117	50	29.94	-	-	-
UBN2	0	genome.wustl.edu	37	7	138968233	138968233	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A273-01A-11D-A16D-09	TCGA-C8-A273-10A-01D-A16D-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c5e6f325-5fd0-4cff-8eaf-6e23e016f605	938d7d67-f5e1-4fce-aacd-9224ed1a882f	7	138968233	138968233	C	A	SNP	UBN2	ENST00000473989	human	ensembl	69_37n	+1	known	missense	c.2582	p.S861Y	1.000	NULL	NULL	-	no_errors	UBN2	HGNC	ENSG00000157741	41	0	0.00	176	32	15.38	-	-	-
