Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTB	0	genome.wustl.edu	37	7	5569207	5569207	+	Silent	SNP	G	G	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	7	5569207	5569207	G	T	SNP	ACTB	ENST00000331789	human	ensembl	69_37n	-1	known	silent	c.82	p.R28	1.000	pfam_Actin-like,smart_Actin-like,prints_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTB	HGNC	ENSG00000075624	19	0	0.00	15	6	28.57	-	-	-
ACTB	0	genome.wustl.edu	37	7	5569207	5569207	+	Silent	SNP	G	G	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	7	5569207	5569207	G	T	SNP	ACTB	ENST00000331789	human	ensembl	69_37n	-1	known	silent	c.82	p.R28	1.000	pfam_Actin-like,smart_Actin-like,prints_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTB	HGNC	ENSG00000075624	11	0	0.00	15	6	28.57	-	-	-
AHNAK	0	genome.wustl.edu	37	11	62297977	62297977	+	Silent	SNP	T	T	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	11	62297977	62297977	T	C	SNP	AHNAK	ENST00000378024	human	ensembl	69_37n	-1	known	silent	c.3912	p.G1304	0.492	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	397	0	0.00	227	187	45.06	-	-	-
AHNAK	0	genome.wustl.edu	37	11	62297977	62297977	+	Silent	SNP	T	T	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	11	62297977	62297977	T	C	SNP	AHNAK	ENST00000378024	human	ensembl	69_37n	-1	known	silent	c.3912	p.G1304	0.492	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	279	1	0.35	227	187	45.06	-	-	-
AKAP8L	0	genome.wustl.edu	37	19	15511970	15511970	+	Silent	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	19	15511970	15511970	G	C	SNP	AKAP8L	ENST00000397410	human	ensembl	69_37n	-1	known	silent	c.807	p.A269	0.003	NULL	pfam_AKAP95	-	no_errors	AKAP8L	HGNC	ENSG00000011243	131	0	0.00	101	44	30.34	-	-	-
AKAP8L	0	genome.wustl.edu	37	19	15511970	15511970	+	Silent	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	19	15511970	15511970	G	C	SNP	AKAP8L	ENST00000397410	human	ensembl	69_37n	-1	known	silent	c.807	p.A269	0.003	NULL	pfam_AKAP95	-	no_errors	AKAP8L	HGNC	ENSG00000011243	127	0	0.00	101	44	30.34	-	-	-
ANK1	0	genome.wustl.edu	37	8	41582042	41582042	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	8	41582042	41582042	G	A	SNP	ANK1	ENST00000396942	human	ensembl	69_37n	-1	known	missense	c.643	p.H215Y	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534	99	0	0.00	26	32	55.17	-	-	-
ANK1	0	genome.wustl.edu	37	8	41582042	41582042	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	8	41582042	41582042	G	A	SNP	ANK1	ENST00000396942	human	ensembl	69_37n	-1	known	missense	c.643	p.H215Y	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534	100	0	0.00	26	32	55.17	-	-	-
ANK3	0	genome.wustl.edu	37	10	61946501	61946501	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	10	61946501	61946501	C	G	SNP	ANK3	ENST00000280772	human	ensembl	69_37n	-1	known	missense	c.2057	p.R686T	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	405	0	0.00	237	151	38.82	-	-	-
ANK3	0	genome.wustl.edu	37	10	61946501	61946501	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	10	61946501	61946501	C	G	SNP	ANK3	ENST00000280772	human	ensembl	69_37n	-1	known	missense	c.2057	p.R686T	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	353	0	0.00	237	151	38.82	-	-	-
ARRB2	0	genome.wustl.edu	37	17	4621248	4621248	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	17	4621248	4621248	C	T	SNP	ARRB2	ENST00000269260	human	ensembl	69_37n	+1	known	missense	c.551	p.S184L	0.991	superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set,prints_Arrestin	-	no_errors	ARRB2	HGNC	ENSG00000141480	119	0	0.00	43	53	55.21	-	-	-
ARRB2	0	genome.wustl.edu	37	17	4621248	4621248	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	17	4621248	4621248	C	T	SNP	ARRB2	ENST00000269260	human	ensembl	69_37n	+1	known	missense	c.551	p.S184L	0.991	superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set,prints_Arrestin	-	no_errors	ARRB2	HGNC	ENSG00000141480	120	0	0.00	43	53	55.21	-	-	-
ATP1A1	0	genome.wustl.edu	37	1	116933404	116933404	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	1	116933404	116933404	G	A	SNP	ATP1A1	ENST00000295598	human	ensembl	69_37n	+1	known	missense	c.1223	p.G408D	1.000	pfam_Dehalogen-like_hydro,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_cation-ex_asu_euk	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP1A1	HGNC	ENSG00000163399	483	1	0.21	134	204	60.36	-	-	-
ATP1A1	0	genome.wustl.edu	37	1	116933404	116933404	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	1	116933404	116933404	G	A	SNP	ATP1A1	ENST00000295598	human	ensembl	69_37n	+1	known	missense	c.1223	p.G408D	1.000	pfam_Dehalogen-like_hydro,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_cation-ex_asu_euk	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP1A1	HGNC	ENSG00000163399	490	1	0.20	134	204	60.36	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16950820	16950820	+	RNA	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	1	16950820	16950820	G	A	SNP	CROCCP2	ENST00000421700	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	41	0	0.00	35	15	30.00	-	-	-
EFHA2	0	genome.wustl.edu	37	8	16961987	16961987	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	8	16961987	16961987	G	C	SNP	EFHA2	ENST00000318063	human	ensembl	69_37n	+1	known	missense	c.1072	p.E358Q	1.000	NULL	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	EFHA2	HGNC	ENSG00000155970	117	0	0.00	18	25	56.82	-	-	-
EFHA2	0	genome.wustl.edu	37	8	16961987	16961987	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	8	16961987	16961987	G	C	SNP	EFHA2	ENST00000318063	human	ensembl	69_37n	+1	known	missense	c.1072	p.E358Q	1.000	NULL	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	EFHA2	HGNC	ENSG00000155970	85	0	0.00	18	25	56.82	-	-	-
EPN1	0	genome.wustl.edu	37	19	56206663	56206663	+	Silent	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	19	56206663	56206663	C	T	SNP	EPN1	ENST00000411543	human	ensembl	69_37n	+1	known	silent	c.1930	p.L644	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245	22	0	0.00	12	9	42.86	-	-	-
EPN1	0	genome.wustl.edu	37	19	56206663	56206663	+	Silent	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	19	56206663	56206663	C	T	SNP	EPN1	ENST00000411543	human	ensembl	69_37n	+1	known	silent	c.1930	p.L644	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245	24	0	0.00	12	9	42.86	-	-	-
FGFBP2	0	genome.wustl.edu	37	4	15964689	15964689	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	4	15964689	15964689	G	T	SNP	FGFBP2	ENST00000259989	human	ensembl	69_37n	-1	known	missense	c.64	p.P22T	0.162	pfam_FGF1-bd	pfam_FGF1-bd	-	no_errors	FGFBP2	HGNC	ENSG00000137441	59	0	0.00	35	22	38.60	-	-	-
FLG	0	genome.wustl.edu	37	1	152278409	152278409	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	1	152278409	152278409	A	T	SNP	FLG	ENST00000368799	human	ensembl	69_37n	-1	known	missense	c.8953	p.S2985T	0.002	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	22	0	0.00	21	15	41.67	-	-	-
FLG	0	genome.wustl.edu	37	1	152278409	152278409	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	1	152278409	152278409	A	T	SNP	FLG	ENST00000368799	human	ensembl	69_37n	-1	known	missense	c.8953	p.S2985T	0.002	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	20	0	0.00	21	15	41.67	-	-	-
GPRIN2	0	genome.wustl.edu	37	10	46998995	46998995	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	10	46998995	46998995	C	G	SNP	GPRIN2	ENST00000374314	human	ensembl	69_37n	+1	known	missense	c.115	p.L39V	0.989	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175	12	0	0.00	16	5	23.81	-	-	-
HAUS6	0	genome.wustl.edu	37	9	19096691	19096691	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	9	19096691	19096691	G	C	SNP	HAUS6	ENST00000380502	human	ensembl	69_37n	-1	known	missense	c.205	p.L69V	0.991	NULL	NULL	-	no_errors	HAUS6	HGNC	ENSG00000147874	270	0	0.00	122	54	30.68	-	-	-
HAUS6	0	genome.wustl.edu	37	9	19096691	19096691	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	9	19096691	19096691	G	C	SNP	HAUS6	ENST00000380502	human	ensembl	69_37n	-1	known	missense	c.205	p.L69V	0.991	NULL	NULL	-	no_errors	HAUS6	HGNC	ENSG00000147874	210	0	0.00	122	54	30.68	-	-	-
HLA-DRB6	0	genome.wustl.edu	37	6	32522679	32522679	+	RNA	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	6	32522679	32522679	G	C	SNP	HLA-DRB6	ENST00000411500	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HLA-DRB6	HGNC	ENSG00000229391	25	0	0.00	18	5	21.74	-	-	-
KANK2	0	genome.wustl.edu	37	19	11277272	11277272	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	19	11277272	11277272	C	T	SNP	KANK2	ENST00000432929	human	ensembl	69_37n	-1	known	missense	c.2542	p.D848N	0.985	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK2	HGNC	ENSG00000197256	313	0	0.00	183	71	27.95	-	-	-
KANK2	0	genome.wustl.edu	37	19	11277272	11277272	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	19	11277272	11277272	C	T	SNP	KANK2	ENST00000432929	human	ensembl	69_37n	-1	known	missense	c.2542	p.D848N	0.985	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK2	HGNC	ENSG00000197256	250	0	0.00	183	71	27.95	-	-	-
KIAA1210	0	genome.wustl.edu	37	X	118284280	118284280	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	X	118284280	118284280	G	A	SNP	KIAA1210	ENST00000402510	human	ensembl	69_37n	-1	known	missense	c.263	p.P88L	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423	112	0	0.00	99	64	39.26	-	-	-
KIAA1210	0	genome.wustl.edu	37	X	118284280	118284280	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	X	118284280	118284280	G	A	SNP	KIAA1210	ENST00000402510	human	ensembl	69_37n	-1	known	missense	c.263	p.P88L	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423	101	0	0.00	99	64	39.26	-	-	-
LAMB2	0	genome.wustl.edu	37	3	49159432	49159432	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	3	49159432	49159432	C	T	SNP	LAMB2	ENST00000305544	human	ensembl	69_37n	-1	known	missense	c.4868	p.G1623D	0.816	NULL	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037	95	0	0.00	65	44	40.37	-	-	-
LAMB2	0	genome.wustl.edu	37	3	49159432	49159432	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	3	49159432	49159432	C	T	SNP	LAMB2	ENST00000305544	human	ensembl	69_37n	-1	known	missense	c.4868	p.G1623D	0.816	NULL	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037	102	0	0.00	65	44	40.37	-	-	-
LMTK3	0	genome.wustl.edu	37	19	49014822	49014822	+	Silent	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	19	49014822	49014822	G	A	SNP	LMTK3	ENST00000270238	human	ensembl	69_37n	-1	known	silent	c.99	p.P33	0.889	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC	ENSG00000142235	28	0	0.00	20	25	55.56	-	-	-
MGA	0	genome.wustl.edu	37	15	42002989	42002989	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	15	42002989	42002989	G	-	DEL	MGA	ENST00000219905	human	ensembl	69_37n	+1	known	frame_shift_del	c.2526	p.G843fs	1.000	NULL	pfam_TF_T-box,pfam_HLH_DNA-bd,superfamily_p53-like_TF_DNA-bd,superfamily_HLH_DNA-bd,smart_TF_T-box,smart_HLH_DNA-bd,prints_TF_T-box,pfscan_HLH_DNA-bd,pfscan_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197	315	1	0.32	220	98	30.63	-	-	-
MGA	0	genome.wustl.edu	37	15	42002989	42002989	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	15	42002989	42002989	G	-	DEL	MGA	ENST00000219905	human	ensembl	69_37n	+1	known	frame_shift_del	c.2526	p.G843fs	1.000	NULL	pfam_TF_T-box,pfam_HLH_DNA-bd,superfamily_p53-like_TF_DNA-bd,superfamily_HLH_DNA-bd,smart_TF_T-box,smart_HLH_DNA-bd,prints_TF_T-box,pfscan_HLH_DNA-bd,pfscan_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197	320	1	0.31	220	98	30.63	-	-	-
MTRR	0	genome.wustl.edu	37	5	7889262	7889262	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	5	7889262	7889262	C	G	SNP	MTRR	ENST00000264668	human	ensembl	69_37n	+1	known	missense	c.1282	p.L428V	1.000	pfam_FAD-binding_1,superfamily_Riboflavin_synthase-like_b-brl	pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin,pfscan_Flavodoxin/NO_synth	-	no_errors	MTRR	HGNC	ENSG00000124275	209	0	0.00	250	182	42.03	-	-	-
MTRR	0	genome.wustl.edu	37	5	7889262	7889262	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	5	7889262	7889262	C	G	SNP	MTRR	ENST00000264668	human	ensembl	69_37n	+1	known	missense	c.1282	p.L428V	1.000	pfam_FAD-binding_1,superfamily_Riboflavin_synthase-like_b-brl	pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin,pfscan_Flavodoxin/NO_synth	-	no_errors	MTRR	HGNC	ENSG00000124275	203	0	0.00	250	182	42.03	-	-	-
OR10K1	0	genome.wustl.edu	37	1	158436273	158436273	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	1	158436273	158436273	A	T	SNP	OR10K1	ENST00000289451	human	ensembl	69_37n	+1	known	missense	c.922	p.T308S	0.009	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10K1	HGNC	ENSG00000173285	227	0	0.00	201	87	30.21	-	-	-
OR10K1	0	genome.wustl.edu	37	1	158436273	158436273	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	1	158436273	158436273	A	T	SNP	OR10K1	ENST00000289451	human	ensembl	69_37n	+1	known	missense	c.922	p.T308S	0.009	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10K1	HGNC	ENSG00000173285	205	0	0.00	201	87	30.21	-	-	-
PDZD8	0	genome.wustl.edu	37	10	119078457	119078457	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	10	119078457	119078457	C	T	SNP	PDZD8	ENST00000334464	human	ensembl	69_37n	-1	known	missense	c.1024	p.E342K	1.000	NULL	pfam_PDZ,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_PDZ,smart_PDZ,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_PDZ,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PDZD8	HGNC	ENSG00000165650	471	0	0.00	233	99	29.73	-	-	-
PDZD8	0	genome.wustl.edu	37	10	119078457	119078457	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	10	119078457	119078457	C	T	SNP	PDZD8	ENST00000334464	human	ensembl	69_37n	-1	known	missense	c.1024	p.E342K	1.000	NULL	pfam_PDZ,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_PDZ,smart_PDZ,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_PDZ,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PDZD8	HGNC	ENSG00000165650	377	1	0.26	233	99	29.73	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	283	0	0.00	131	96	42.29	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	216	0	0.00	131	96	42.29	-	-	-
PLEKHG6	0	genome.wustl.edu	37	12	6426507	6426507	+	Silent	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	12	6426507	6426507	C	T	SNP	PLEKHG6	ENST00000011684	human	ensembl	69_37n	+1	known	silent	c.795	p.L265	0.868	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG6	HGNC	ENSG00000008323	204	0	0.00	134	66	33.00	-	-	-
PLEKHG6	0	genome.wustl.edu	37	12	6426507	6426507	+	Silent	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	12	6426507	6426507	C	T	SNP	PLEKHG6	ENST00000011684	human	ensembl	69_37n	+1	known	silent	c.795	p.L265	0.868	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG6	HGNC	ENSG00000008323	179	0	0.00	134	66	33.00	-	-	-
RGPD4	0	genome.wustl.edu	37	2	108460141	108460141	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	2	108460141	108460141	C	T	SNP	RGPD4	ENST00000354986	human	ensembl	69_37n	+1	known	missense	c.737	p.T246M	0.967	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR-1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862	27	0	0.00	14	6	30.00	-	-	-
RGS12	0	genome.wustl.edu	37	4	3432479	3432479	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	4	3432479	3432479	C	-	DEL	RGS12	ENST00000344733	human	ensembl	69_37n	+1	known	frame_shift_del	c.3911	p.V1306fs	0.311	NULL	pfam_Raf-like_ras-bd,pfam_Regulat_G_prot_signal,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTyr_interaction_dom,smart_Regulat_G_prot_signal,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTyr_interaction_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal,prints_Regulat_G_prot_signal	-	no_errors	RGS12	HGNC	ENSG00000159788	9	0	0.00	4	2	33.33	-	-	-
SEZ6	0	genome.wustl.edu	37	17	27296863	27296863	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	17	27296863	27296863	G	A	SNP	SEZ6	ENST00000540419	human	ensembl	69_37n	-1	known	missense	c.464	p.S155L	1.000	superfamily_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,smart_CUB,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SEZ6	HGNC	ENSG00000063015	72	0	0.00	115	32	21.62	-	-	-
SEZ6	0	genome.wustl.edu	37	17	27296863	27296863	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	17	27296863	27296863	G	A	SNP	SEZ6	ENST00000540419	human	ensembl	69_37n	-1	known	missense	c.464	p.S155L	1.000	superfamily_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,smart_CUB,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SEZ6	HGNC	ENSG00000063015	82	0	0.00	115	32	21.62	-	-	-
SNTB2	0	genome.wustl.edu	37	16	69294160	69294160	+	Silent	SNP	A	A	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	16	69294160	69294160	A	G	SNP	SNTB2	ENST00000336278	human	ensembl	69_37n	+1	known	silent	c.1002	p.E334	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTB2	HGNC	ENSG00000168807	205	1	0.49	45	90	66.67	-	-	-
SNTB2	0	genome.wustl.edu	37	16	69294160	69294160	+	Silent	SNP	A	A	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	16	69294160	69294160	A	G	SNP	SNTB2	ENST00000336278	human	ensembl	69_37n	+1	known	silent	c.1002	p.E334	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTB2	HGNC	ENSG00000168807	166	0	0.00	45	90	66.67	-	-	-
SPIB	0	genome.wustl.edu	37	19	50926253	50926253	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	19	50926253	50926253	C	-	DEL	SPIB	ENST00000270632	human	ensembl	69_37n	+1	known	frame_shift_del	c.298	p.P100fs	0.982	NULL	pfam_Ets,smart_Ets,prints_Ets,pfscan_Ets	-	no_errors	SPIB	HGNC	ENSG00000142539	12	0	0.00	10	6	37.50	-	-	-
SREBF1	0	genome.wustl.edu	37	17	17716089	17716090	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	17	17716089	17716090	-	AG	INS	SREBF1	ENST00000355815	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3381_3380	p.P1128fs	1.000:1.000	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	SREBF1	HGNC	ENSG00000072310	9	0	0.00	11	4	26.67	-	-	-
SREBF1	0	genome.wustl.edu	37	17	17716089	17716090	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	17	17716089	17716090	-	AG	INS	SREBF1	ENST00000355815	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3381_3380	p.P1128fs	1.000:1.000	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	SREBF1	HGNC	ENSG00000072310	9	0	0.00	11	4	26.67	-	-	-
SYNCRIP	0	genome.wustl.edu	37	6	86332352	86332353	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	6	86332352	86332353	TG	-	DEL	SYNCRIP	ENST00000369622	human	ensembl	69_37n	-1	known	frame_shift_del	c.856_855	p.N285fs	1.000:1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	SYNCRIP	HGNC	ENSG00000135316	405	0	0.00	259	71	21.52	-	-	-
SYNCRIP	0	genome.wustl.edu	37	6	86332352	86332353	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	6	86332352	86332353	TG	-	DEL	SYNCRIP	ENST00000369622	human	ensembl	69_37n	-1	known	frame_shift_del	c.856_855	p.N285fs	1.000:1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	SYNCRIP	HGNC	ENSG00000135316	364	0	0.00	259	71	21.52	-	-	-
TIPIN	0	genome.wustl.edu	37	15	66629421	66629421	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	15	66629421	66629421	C	G	SNP	TIPIN	ENST00000261881	human	ensembl	69_37n	-1	known	missense	c.781	p.D261H	0.003	NULL	pfam_Swi3	-	no_errors	TIPIN	HGNC	ENSG00000075131	494	0	0.00	270	188	41.05	-	-	-
TIPIN	0	genome.wustl.edu	37	15	66629421	66629421	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	15	66629421	66629421	C	G	SNP	TIPIN	ENST00000261881	human	ensembl	69_37n	-1	known	missense	c.781	p.D261H	0.003	NULL	pfam_Swi3	-	no_errors	TIPIN	HGNC	ENSG00000075131	391	1	0.26	270	188	41.05	-	-	-
TP53	0	genome.wustl.edu	37	17	7578524	7578524	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	17	7578524	7578524	G	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.406	p.Q136E	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	152	1	0.65	49	75	59.52	-	-	-
TP53	0	genome.wustl.edu	37	17	7578524	7578524	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	17	7578524	7578524	G	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.406	p.Q136E	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	138	0	0.00	49	75	59.52	-	-	-
TUBA3C	0	genome.wustl.edu	37	13	19751640	19751640	+	Silent	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	13	19751640	19751640	G	A	SNP	TUBA3C	ENST00000400113	human	ensembl	69_37n	-1	known	silent	c.483	p.Y161	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Alpha_tubulin,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	274	1	0.36	259	141	35.25	-	-	-
TUBA3C	0	genome.wustl.edu	37	13	19751640	19751640	+	Silent	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	13	19751640	19751640	G	A	SNP	TUBA3C	ENST00000400113	human	ensembl	69_37n	-1	known	silent	c.483	p.Y161	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Alpha_tubulin,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	248	0	0.00	259	141	35.25	-	-	-
ZNF540	0	genome.wustl.edu	37	19	38104051	38104051	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	1297e0da-fbf8-4566-8f22-17095e4031f4	19	38104051	38104051	G	A	SNP	ZNF540	ENST00000316433	human	ensembl	69_37n	+1	known	missense	c.1870	p.E624K	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF540	HGNC	ENSG00000171817	98	0	0.00	55	40	42.11	-	-	-
ZNF540	0	genome.wustl.edu	37	19	38104051	38104051	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14Y-01A-21D-A12B-09	TCGA-E2-A14Y-11A-33D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63f0927-5186-4558-853d-4eed95ba0ac8	4bca2c1c-af66-454e-a3a0-18f0e11318c8	19	38104051	38104051	G	A	SNP	ZNF540	ENST00000316433	human	ensembl	69_37n	+1	known	missense	c.1870	p.E624K	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF540	HGNC	ENSG00000171817	73	0	0.00	55	40	42.11	-	-	-
