Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AGBL3	0	genome.wustl.edu	37	7	134672706	134672706	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	134672706	134672706	G	A	SNP	AGBL3	ENST00000436302	human	ensembl	69_37n	+1	known	missense	c.22	p.E8K	0.999	NULL	pfam_Peptidase_M14	-	no_errors	AGBL3	HGNC	ENSG00000146856	524	0	0.00	306	52	14.53	-	-	-
AP2A1	0	genome.wustl.edu	37	19	50302177	50302177	+	Silent	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	50302177	50302177	C	T	SNP	AP2A1	ENST00000359032	human	ensembl	69_37n	+1	known	silent	c.933	p.F311	0.984	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP2_complex_asu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a-adaptin_app_sub_C,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP2_complex_asu	-	no_errors	AP2A1	HGNC	ENSG00000196961	145	0	0.00	151	27	15.17	-	-	-
AQP5	0	genome.wustl.edu	37	12	50355892	50355892	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	12	50355892	50355892	C	G	SNP	AQP5	ENST00000293599	human	ensembl	69_37n	+1	known	missense	c.92	p.S31W	0.949	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_Aquaporin	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_5,tigrfam_Aquaporin	-	no_errors	AQP5	HGNC	ENSG00000161798	56	0	0.00	64	19	22.89	-	-	-
ATP7A	0	genome.wustl.edu	37	X	77289220	77289220	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	X	77289220	77289220	G	A	SNP	ATP7A	ENST00000341514	human	ensembl	69_37n	+1	known	missense	c.3412	p.E1138K	1.000	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_heavy-metal	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,pfam_HAD-SF_hydro-like_3,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_ATPase_P-typ_cat/Cu-transptr,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_H-transp,prints_HG_scavenger,tigrfam_ATPase_P-typ_heavy-metal,tigrfam_ATPase_P-typ_ion-transptr,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7A	HGNC	ENSG00000165240	468	0	0.00	264	107	28.69	-	-	-
BOD1L1	0	genome.wustl.edu	37	4	13579099	13579099	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	13579099	13579099	C	G	SNP	BOD1L1	ENST00000040738	human	ensembl	69_37n	-1	known	missense	c.8812	p.E2938Q	0.383	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	541	0	0.00	376	66	14.93	-	-	-
C16orf96	0	genome.wustl.edu	37	16	4638311	4638311	+	Silent	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	16	4638311	4638311	C	G	SNP	C16orf96	ENST00000444310	human	ensembl	69_37n	+1	known	silent	c.2571	p.L857	0.000	NULL	NULL	-	no_errors	C16orf96	HGNC	ENSG00000205832	295	0	0.00	269	69	20.35	-	-	-
C19orf76	0	genome.wustl.edu	37	19	50193365	50193365	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	50193365	50193365	G	A	SNP	C19orf76	ENST00000420022	human	ensembl	69_37n	+1	known	missense	c.77	p.R26Q	0.000	NULL	NULL	-	no_errors	C19orf76	HGNC	ENSG00000224420	17	0	0.00	19	12	38.71	-	-	-
C2orf83	0	genome.wustl.edu	37	2	228476365	228476365	+	Silent	SNP	A	A	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	2	228476365	228476365	A	G	SNP	C2orf83	ENST00000264387	human	ensembl	69_37n	-1	known	silent	c.198	p.S66	0.382	NULL	pfam_Folate_carrier	-	no_errors	C2orf83	HGNC	ENSG00000042304	207	0	0.00	156	35	18.32	-	-	-
CA6	0	genome.wustl.edu	37	1	9022689	9022689	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	9022689	9022689	C	T	SNP	CA6	ENST00000377443	human	ensembl	69_37n	+1	known	missense	c.545	p.S182F	0.085	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA6	HGNC	ENSG00000131686	389	1	0.26	282	68	19.43	-	-	-
CCDC154	0	genome.wustl.edu	37	16	1488633	1488633	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	16	1488633	1488633	C	T	SNP	CCDC154	ENST00000389176	human	ensembl	69_37n	-1	known	missense	c.1039	p.E347K	0.564	NULL	NULL	-	no_errors	CCDC154	HGNC	ENSG00000197599	48	0	0.00	84	15	15.15	-	-	-
CCDC158	0	genome.wustl.edu	37	4	77304840	77304840	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	77304840	77304840	G	C	SNP	CCDC158	ENST00000388914	human	ensembl	69_37n	-1	known	missense	c.778	p.L260V	0.955	NULL	superfamily_Prefoldin	-	no_errors	CCDC158	HGNC	ENSG00000163749	1026	0	0.00	816	118	12.63	-	-	-
CCNT1	0	genome.wustl.edu	37	12	49086993	49086993	+	Silent	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	12	49086993	49086993	G	C	SNP	CCNT1	ENST00000261900	human	ensembl	69_37n	-1	known	silent	c.2004	p.L668	0.999	NULL	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNT1	HGNC	ENSG00000129315	315	0	0.00	307	55	15.15	-	-	-
CD55	0	genome.wustl.edu	37	1	207498997	207498997	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	207498997	207498997	G	A	SNP	CD55	ENST00000314754	human	ensembl	69_37n	+1	known	missense	c.509	p.R170Q	0.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CD55	HGNC	ENSG00000196352	570	0	0.00	426	74	14.80	-	-	-
CDHR4	0	genome.wustl.edu	37	3	49831147	49831147	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	3	49831147	49831147	G	A	SNP	CDHR4	ENST00000412678	human	ensembl	69_37n	-1	known	missense	c.1492	p.H498Y	0.032	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDHR4	HGNC	ENSG00000187492	277	0	0.00	161	63	28.00	-	-	-
CDK19	0	genome.wustl.edu	37	6	110944522	110944522	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	6	110944522	110944522	C	A	SNP	CDK19	ENST00000368911	human	ensembl	69_37n	-1	known	missense	c.904	p.V302F	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK19	HGNC	ENSG00000155111	366	0	0.00	240	57	19.13	-	-	-
CHRNB1	0	genome.wustl.edu	37	17	7359155	7359155	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	17	7359155	7359155	C	A	SNP	CHRNB1	ENST00000570557	human	ensembl	69_37n	+1	novel	nonsense	c.923	p.S308*	0.987	superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CHRNB1	HGNC	ENSG00000170175	115	0	0.00	86	28	24.56	-	-	-
CHRNB4	0	genome.wustl.edu	37	15	78921439	78921439	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	15	78921439	78921439	G	A	SNP	CHRNB4	ENST00000261751	human	ensembl	69_37n	-1	known	missense	c.1208	p.S403F	0.003	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB4	HGNC	ENSG00000117971	215	0	0.00	253	85	25.07	-	-	-
COL12A1	0	genome.wustl.edu	37	6	75814970	75814970	+	Silent	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	6	75814970	75814970	G	A	SNP	COL12A1	ENST00000322507	human	ensembl	69_37n	-1	known	silent	c.8217	p.C2739	0.997	NULL	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	226	0	0.00	151	30	16.57	-	-	-
COL12A1	0	genome.wustl.edu	37	6	75892984	75892984	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	6	75892984	75892984	C	G	SNP	COL12A1	ENST00000322507	human	ensembl	69_37n	-1	known	missense	c.1673	p.R558T	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	404	0	0.00	251	49	16.33	-	-	-
CSMD1	0	genome.wustl.edu	37	8	3057296	3057296	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	8	3057296	3057296	G	A	SNP	CSMD1	ENST00000335551	human	ensembl	69_37n	-1	novel	missense	c.3575	p.S1192F	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,smart_CUB,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CSMD1	HGNC	ENSG00000183117	129	0	0.00	77	29	27.36	-	-	-
DGKA	0	genome.wustl.edu	37	12	56335341	56335341	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	12	56335341	56335341	A	G	SNP	DGKA	ENST00000331886	human	ensembl	69_37n	+1	known	missense	c.1223	p.N408S	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKA	HGNC	ENSG00000065357	463	1	0.22	322	144	30.84	-	-	-
EIF4G3	0	genome.wustl.edu	37	1	21175934	21175934	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	21175934	21175934	C	T	SNP	EIF4G3	ENST00000374937	human	ensembl	69_37n	-1	known	missense	c.3712	p.E1238K	1.000	pfam_Initiation_fac_eIF4g_MI,superfamily_ARM-type_fold,smart_Initiation_fac_eIF4g_MI	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G3	HGNC	ENSG00000075151	365	0	0.00	237	71	23.05	-	-	-
EML5	0	genome.wustl.edu	37	14	89091348	89091348	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	14	89091348	89091348	C	T	SNP	EML5	ENST00000554922	human	ensembl	69_37n	-1	known	missense	c.4864	p.D1622N	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML5	HGNC	ENSG00000165521	158	0	0.00	136	35	20.47	-	-	-
EPOR	0	genome.wustl.edu	37	19	11488778	11488778	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	11488778	11488778	G	A	SNP	EPOR	ENST00000222139	human	ensembl	69_37n	-1	known	missense	c.1409	p.S470L	0.971	pirsf_Erythropoietin_rcpt	pfam_Growth/epo_recpt_lig-bind,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pirsf_Erythropoietin_rcpt,pfscan_Fibronectin_type3	-	no_errors	EPOR	HGNC	ENSG00000187266	125	0	0.00	59	60	50.42	-	-	-
EYS	0	genome.wustl.edu	37	6	65531584	65531584	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	6	65531584	65531584	G	A	SNP	EYS	ENST00000370616	human	ensembl	69_37n	-1	known	missense	c.3197	p.S1066L	0.030	smart_EGF-like_Ca-bd,smart_EGF-like	pfam_Laminin_G,pfam_EGF-like_dom,superfamily_ConA-like_lec_gl,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	253	0	0.00	103	49	32.24	-	-	-
FAM186A	0	genome.wustl.edu	37	12	50747708	50747708	+	Silent	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	12	50747708	50747708	C	T	SNP	FAM186A	ENST00000327337	human	ensembl	69_37n	-1	known	silent	c.2907	p.Q969	0.867	NULL	NULL	-	no_errors	FAM186A	HGNC	ENSG00000185958	944	0	0.00	630	280	30.77	-	-	-
FAM35B	0	genome.wustl.edu	37	10	46927958	46927958	+	RNA	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	10	46927958	46927958	C	G	SNP	FAM35B	ENST00000497389	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FAM35B	HGNC	ENSG00000165874	141	0	0.00	64	29	31.18	-	-	-
FAM45A	0	genome.wustl.edu	37	10	120863682	120863682	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	10	120863682	120863682	C	G	SNP	FAM45A	ENST00000361432	human	ensembl	69_37n	+1	known	missense	c.28	p.Q10E	1.000	NULL	pfam_Secretory_pathway_prot_Avl9	-	no_errors	FAM45A	HGNC	ENSG00000119979	12	0	0.00	22	7	24.14	-	-	-
FANK1	0	genome.wustl.edu	37	10	127668745	127668745	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	10	127668745	127668745	C	T	SNP	FANK1	ENST00000368693	human	ensembl	69_37n	+1	known	missense	c.29	p.S10L	0.753	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Fibronectin_type3,prints_Ankyrin_rpt	-	no_errors	FANK1	HGNC	ENSG00000203780	314	0	0.00	202	48	19.20	-	-	-
FBL	0	genome.wustl.edu	37	19	40328380	40328380	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	40328380	40328380	C	T	SNP	FBL	ENST00000221801	human	ensembl	69_37n	-1	known	missense	c.653	p.R218Q	1.000	pfam_Fibrillarin,pirsf_Fibrillarin,prints_Fibrillarin	pfam_Fibrillarin,pirsf_Fibrillarin,prints_Fibrillarin	-	no_errors	FBL	HGNC	ENSG00000105202	273	0	0.00	219	100	31.35	-	-	-
FREM1	0	genome.wustl.edu	37	9	14851512	14851512	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	9	14851512	14851512	C	G	SNP	FREM1	ENST00000380881	human	ensembl	69_37n	-1	known	missense	c.925	p.D309H	1.000	NULL	pfam_C-type_lectin,pfam_Calx_beta,superfamily_C-type_lectin_fold,superfamily_Cadherin-like,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	FREM1	HGNC	ENSG00000164946	257	0	0.00	161	37	18.69	-	-	-
GABRQ	0	genome.wustl.edu	37	X	151808900	151808900	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	X	151808900	151808900	G	A	SNP	GABRQ	ENST00000370306	human	ensembl	69_37n	+1	known	missense	c.211	p.D71N	0.999	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABBAg_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAt_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABAAb_rcpt,prints_GABAAa_rcpt,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRQ	HGNC	ENSG00000147402	475	0	0.00	507	115	18.49	-	-	-
GALNTL6	0	genome.wustl.edu	37	4	173961139	173961141	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	173961139	173961141	AGA	-	DEL	GALNTL6	ENST00000506823	human	ensembl	69_37n	+1	known	in_frame_del	c.1694_1696	p.K567in_frame_del	1.000:1.000:1.000	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNTL6	HGNC	ENSG00000174473	428	0	0.00	398	49	10.89	-	-	-
GOLGA8G	0	genome.wustl.edu	37	15	28769180	28769180	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	15	28769180	28769180	C	T	SNP	GOLGA8G	ENST00000416855	human	ensembl	69_37n	-1	known	missense	c.1316	p.G439E	1.000	NULL	NULL	-	no_errors	GOLGA8G	HGNC	ENSG00000183629	153	0	0.00	97	32	24.62	-	-	-
GPATCH4	0	genome.wustl.edu	37	1	156567909	156567909	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	156567909	156567909	C	A	SNP	GPATCH4	ENST00000438976	human	ensembl	69_37n	-1	known	missense	c.266	p.G89V	1.000	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH4	HGNC	ENSG00000160818	415	0	0.00	284	125	30.49	-	-	-
GPSM2	0	genome.wustl.edu	37	1	109445764	109445764	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	109445764	109445764	G	A	SNP	GPSM2	ENST00000264126	human	ensembl	69_37n	+1	known	missense	c.970	p.A324T	1.000	pfam_TPR-4,smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_GoLoco_motif,pfam_TPR-1,pfam_TPR-4,smart_TPR_repeat,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GPSM2	HGNC	ENSG00000121957	513	0	0.00	237	142	37.47	-	-	-
GRIN3A	0	genome.wustl.edu	37	9	104499593	104499593	+	Silent	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	9	104499593	104499593	G	A	SNP	GRIN3A	ENST00000361820	human	ensembl	69_37n	-1	known	silent	c.669	p.I223	0.999	NULL	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785	70	0	0.00	93	14	13.08	-	-	-
HIST1H2AD	0	genome.wustl.edu	37	6	26199108	26199108	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	6	26199108	26199108	C	G	SNP	HIST1H2AD	ENST00000341023	human	ensembl	69_37n	-1	known	missense	c.364	p.E122Q	1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AD	HGNC	ENSG00000196866	417	0	0.00	304	54	15.08	-	-	-
HIST1H2BC	0	genome.wustl.edu	37	6	26123904	26123904	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	6	26123904	26123904	C	A	SNP	HIST1H2BC	ENST00000314332	human	ensembl	69_37n	-1	known	nonsense	c.229	p.E77*	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BC	HGNC	ENSG00000180596	139	0	0.00	110	26	19.12	-	-	-
HIST1H4I	0	genome.wustl.edu	37	6	27107360	27107360	+	Silent	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	6	27107360	27107360	C	G	SNP	HIST1H4I	ENST00000354348	human	ensembl	69_37n	+1	known	silent	c.273	p.L91	0.999	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4I	HGNC	ENSG00000198339	71	0	0.00	61	16	20.78	-	-	-
HMGN5	0	genome.wustl.edu	37	X	80371738	80371738	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	X	80371738	80371738	C	A	SNP	HMGN5	ENST00000358130	human	ensembl	69_37n	-1	known	nonsense	c.232	p.E78*	0.484	pfam_HMGN_fam,smart_HMGN_fam	pfam_HMGN_fam,smart_HMGN_fam,prints_HMGN_fam	-	no_errors	HMGN5	HGNC	ENSG00000198157	823	1	0.12	644	98	13.12	-	-	-
IGKV1D-12	0	genome.wustl.edu	37	2	90199146	90199146	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	2	90199146	90199146	G	A	SNP	IGKV1D-12	ENST00000390276	human	ensembl	69_37n	+1	known	missense	c.307	p.E103K	1.000	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGKV1D-12	HGNC	ENSG00000240834	410	0	0.00	309	72	18.90	-	-	-
IL37	0	genome.wustl.edu	37	2	113676141	113676141	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	2	113676141	113676141	G	C	SNP	IL37	ENST00000263326	human	ensembl	69_37n	+1	known	missense	c.412	p.E138Q	0.610	pfam_Interleukin_1,superfamily_Cytokine_IL1-like,smart_Interleukin_1	pfam_Interleukin_1,superfamily_Cytokine_IL1-like,smart_Interleukin_1,prints_Interleukin_1,prints_IL_rcpt_IL1RA	-	no_errors	IL37	HGNC	ENSG00000125571	144	0	0.00	95	22	18.80	-	-	-
ITGA2	0	genome.wustl.edu	37	5	52366060	52366060	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	5	52366060	52366060	G	C	SNP	ITGA2	ENST00000296585	human	ensembl	69_37n	+1	known	missense	c.2205	p.Q735H	0.000	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGA2	HGNC	ENSG00000164171	164	0	0.00	92	54	36.99	-	-	-
KIAA1109	0	genome.wustl.edu	37	4	123230553	123230553	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	123230553	123230553	G	T	SNP	KIAA1109	ENST00000264501	human	ensembl	69_37n	+1	known	missense	c.10186	p.D3396Y	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	629	0	0.00	391	87	18.20	-	-	-
KIAA2022	0	genome.wustl.edu	37	X	73962903	73962903	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	X	73962903	73962903	C	G	SNP	KIAA2022	ENST00000055682	human	ensembl	69_37n	-1	known	missense	c.1489	p.D497H	1.000	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030	534	0	0.00	449	79	14.96	-	-	-
KRTAP4-8	0	genome.wustl.edu	37	17	39254032	39254032	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	17	39254032	39254032	G	T	SNP	KRTAP4-8	ENST00000333822	human	ensembl	69_37n	-1	known	missense	c.305	p.P102H	0.655	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-8	HGNC	ENSG00000204880	23	0	0.00	18	12	40.00	-	-	-
LIMK1	0	genome.wustl.edu	37	7	73511431	73511431	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	73511431	73511431	C	T	SNP	LIMK1	ENST00000336180	human	ensembl	69_37n	+1	known	missense	c.313	p.H105Y	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Znf_LIM,pfam_PDZ,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK1	HGNC	ENSG00000106683	92	0	0.00	95	21	18.10	-	-	-
LPPR2	0	genome.wustl.edu	37	19	11473233	11473233	+	Silent	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	11473233	11473233	C	G	SNP	LPPR2	ENST00000591608	human	ensembl	69_37n	+1	known	silent	c.633	p.V211	0.940	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR2	Clone_based_vega_gene	ENSG00000105520	65	0	0.00	18	17	48.57	-	-	-
LRRC43	0	genome.wustl.edu	37	12	122685099	122685099	+	Silent	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	12	122685099	122685099	G	A	SNP	LRRC43	ENST00000339777	human	ensembl	69_37n	+1	known	silent	c.1512	p.V504	0.000	NULL	NULL	-	no_errors	LRRC43	HGNC	ENSG00000158113	188	0	0.00	180	49	21.40	-	-	-
LTBP4	0	genome.wustl.edu	37	19	41117097	41117097	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	41117097	41117097	G	T	SNP	LTBP4	ENST00000308370	human	ensembl	69_37n	+1	known	missense	c.2051	p.R684L	0.963	pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd,pfam_TB_dom,superfamily_TB_dom,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006	85	0	0.00	118	26	18.06	-	-	-
MANBA	0	genome.wustl.edu	37	4	103590198	103590198	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	103590198	103590198	C	G	SNP	MANBA	ENST00000226578	human	ensembl	69_37n	-1	known	missense	c.1239	p.Q413H	1.000	pfam_Glyco_hydro_2_TIM,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_TIM,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like	-	no_errors	MANBA	HGNC	ENSG00000109323	322	0	0.00	252	54	17.59	-	-	-
MAP4	0	genome.wustl.edu	37	3	47951254	47951254	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	3	47951254	47951254	C	A	SNP	MAP4	ENST00000264724	human	ensembl	69_37n	-1	known	nonsense	c.478	p.E160*	0.074	NULL	pfam_Tau/MAP_tubulin-bd_rpt	-	no_errors	MAP4	HGNC	ENSG00000047849	219	0	0.00	58	76	56.72	-	-	-
MAST1	0	genome.wustl.edu	37	19	12976890	12976890	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	12976890	12976890	C	T	SNP	MAST1	ENST00000251472	human	ensembl	69_37n	+1	known	missense	c.2003	p.S668L	1.000	superfamily_Kinase-like_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_cat_dom	-	no_errors	MAST1	HGNC	ENSG00000105613	183	0	0.00	100	37	26.81	-	-	-
MNDA	0	genome.wustl.edu	37	1	158812198	158812198	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	158812198	158812198	G	C	SNP	MNDA	ENST00000368141	human	ensembl	69_37n	+1	known	missense	c.255	p.E85D	0.001	pfscan_DAPIN	pfam_HIN200/IF120x,pfam_DAPIN,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	MNDA	HGNC	ENSG00000163563	206	0	0.00	136	27	16.56	-	-	-
MUC17	0	genome.wustl.edu	37	7	100681335	100681335	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	100681335	100681335	C	T	SNP	MUC17	ENST00000306151	human	ensembl	69_37n	+1	known	missense	c.6638	p.S2213L	0.002	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	MUC17	HGNC	ENSG00000169876	236	0	0.00	170	38	18.27	-	-	-
MUC17	0	genome.wustl.edu	37	7	100683508	100683508	+	Silent	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	100683508	100683508	C	T	SNP	MUC17	ENST00000306151	human	ensembl	69_37n	+1	known	silent	c.8811	p.T2937	0.002	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	MUC17	HGNC	ENSG00000169876	114	0	0.00	88	21	19.27	-	-	-
MYLK	0	genome.wustl.edu	37	3	123419644	123419644	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	3	123419644	123419644	C	G	SNP	MYLK	ENST00000360304	human	ensembl	69_37n	-1	known	missense	c.2671	p.E891Q	1.000	NULL	pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	MYLK	HGNC	ENSG00000065534	101	0	0.00	104	30	22.22	-	-	-
NFATC4	0	genome.wustl.edu	37	14	24836334	24836334	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	14	24836334	24836334	C	G	SNP	NFATC4	ENST00000413692	human	ensembl	69_37n	+1	known	missense	c.74	p.S25C	0.000	NULL	pfam_RHD,pfam_IPT_TIG_rcpt,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT_TIG_rcpt,pfscan_RHD,prints_NFAT	-	no_errors	NFATC4	HGNC	ENSG00000100968	391	0	0.00	470	87	15.59	-	-	-
NLRP2	0	genome.wustl.edu	37	19	55493529	55493529	+	Splice_Site	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	55493529	55493529	G	C	SNP	NLRP2	ENST00000448584	human	ensembl	69_37n	+1	known	splice_site	c.464-1	e5-1	0.000	-	-	-	no_errors	NLRP2	HGNC	ENSG00000022556	131	0	0.00	101	17	14.41	-	-	-
NSUN3	0	genome.wustl.edu	37	3	93783283	93783283	+	Silent	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	3	93783283	93783283	G	C	SNP	NSUN3	ENST00000314622	human	ensembl	69_37n	+1	known	silent	c.15	p.L5	1.000	NULL	pfam_Fmu/NOL1/Nop2p,prints_RCMT	-	no_errors	NSUN3	HGNC	ENSG00000178694	370	0	0.00	252	37	12.76	-	-	-
NUP205	0	genome.wustl.edu	37	7	135272700	135272700	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	135272700	135272700	C	G	SNP	NUP205	ENST00000285968	human	ensembl	69_37n	+1	known	missense	c.1433	p.S478C	1.000	pfam_DUF3414	pfam_DUF3414	-	no_errors	NUP205	HGNC	ENSG00000155561	334	0	0.00	271	52	16.05	-	-	-
OR2AG1	0	genome.wustl.edu	37	11	6807135	6807135	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	11	6807135	6807135	C	G	SNP	OR2AG1	ENST00000307401	human	ensembl	69_37n	+1	known	missense	c.867	p.I289M	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2AG1	HGNC	ENSG00000170803	509	0	0.00	249	88	26.11	-	-	-
OR2T34	0	genome.wustl.edu	37	1	248737415	248737415	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	248737415	248737415	G	T	SNP	OR2T34	ENST00000328782	human	ensembl	69_37n	-1	known	missense	c.644	p.P215H	0.001	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T34	HGNC	ENSG00000183310	419	0	0.00	473	92	16.28	-	-	-
OTUD7B	0	genome.wustl.edu	37	1	149937782	149937782	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	149937782	149937782	C	T	SNP	OTUD7B	ENST00000369135	human	ensembl	69_37n	-1	known	missense	c.524	p.S175N	0.986	NULL	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7B	HGNC	ENSG00000163113	125	0	0.00	137	23	14.37	-	-	-
P2RY4	0	genome.wustl.edu	37	X	69478551	69478551	+	Silent	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	X	69478551	69478551	G	C	SNP	P2RY4	ENST00000374519	human	ensembl	69_37n	-1	known	silent	c.924	p.L308	1.000	prints_P2Y4_purnocptor,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,prints_P2Y4_purnocptor,prints_P2_purnocptor,prints_7TM_GPCR_Rhodpsn,prints_P2U_purnocptor,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	P2RY4	HGNC	ENSG00000186912	107	0	0.00	100	47	31.97	-	-	-
PAPPA2	0	genome.wustl.edu	37	1	176564678	176564678	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	176564678	176564678	C	A	SNP	PAPPA2	ENST00000367662	human	ensembl	69_37n	+1	known	missense	c.1938	p.D646E	1.000	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl,superfamily_Complement_control_module,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	148	0	0.00	162	37	18.41	-	-	-
PCDH18	0	genome.wustl.edu	37	4	138451370	138451370	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	138451370	138451370	C	T	SNP	PCDH18	ENST00000344876	human	ensembl	69_37n	-1	known	missense	c.1873	p.E625K	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDH18	HGNC	ENSG00000189184	222	0	0.00	179	36	16.74	-	-	-
PCDHGA3	0	genome.wustl.edu	37	5	140724883	140724883	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	5	140724883	140724883	G	T	SNP	PCDHGA3	ENST00000253812	human	ensembl	69_37n	+1	known	missense	c.1283	p.G428V	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245	152	0	0.00	131	28	17.50	-	-	-
PGBD5	0	genome.wustl.edu	37	1	230503782	230503782	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	230503782	230503782	G	C	SNP	PGBD5	ENST00000321327	human	ensembl	69_37n	-1	known	missense	c.233	p.S78C	0.000	NULL	NULL	-	no_errors	PGBD5	HGNC	ENSG00000177614	498	0	0.00	533	82	13.29	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178941973	178941973	+	Silent	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	3	178941973	178941973	C	T	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	silent	c.2292	p.L764	1.000	superfamily_Kinase-like_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	439	0	0.00	309	55	15.11	-	-	-
PIP	0	genome.wustl.edu	37	7	142836690	142836690	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	142836690	142836690	C	G	SNP	PIP	ENST00000291009	human	ensembl	69_37n	+1	known	missense	c.396	p.I132M	0.001	pirsf_SV_autoAg	pfam_SV_autoAg,pirsf_SV_autoAg	-	no_errors	PIP	HGNC	ENSG00000159763	277	0	0.00	227	59	20.63	-	-	-
PLA1A	0	genome.wustl.edu	37	3	119327722	119327722	+	Silent	SNP	A	A	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	3	119327722	119327722	A	T	SNP	PLA1A	ENST00000273371	human	ensembl	69_37n	+1	known	silent	c.381	p.G127	0.000	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase	-	no_errors	PLA1A	HGNC	ENSG00000144837	550	0	0.00	329	80	19.56	-	-	-
PLA2G6	0	genome.wustl.edu	37	22	38541572	38541572	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	22	38541572	38541572	G	C	SNP	PLA2G6	ENST00000332509	human	ensembl	69_37n	-1	known	missense	c.298	p.Q100E	0.273	NULL	pfam_Ankyrin_rpt,pfam_Patatin/PLipase_A2-rel,superfamily_Ankyrin_rpt-contain_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PLA2G6	HGNC	ENSG00000184381	108	0	0.00	267	40	13.03	-	-	-
PLEKHA8	0	genome.wustl.edu	37	7	30088947	30088947	+	Silent	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	30088947	30088947	C	G	SNP	PLEKHA8	ENST00000449726	human	ensembl	69_37n	+1	known	silent	c.546	p.L182	0.003	NULL	pfam_Glycolipid_transfer_prot_dom,pfam_Pleckstrin_homology,superfamily_Glycolipid_transfer_prot_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA8	HGNC	ENSG00000106086	406	0	0.00	387	103	21.02	-	-	-
POU6F2	0	genome.wustl.edu	37	7	39125579	39125579	+	Silent	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	39125579	39125579	G	A	SNP	POU6F2	ENST00000403058	human	ensembl	69_37n	+1	known	silent	c.138	p.L46	1.000	NULL	pfam_POU_specific,pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,smart_Homeodomain,pfscan_Homeodomain,pfscan_POU_specific,prints_POU	-	no_errors	POU6F2	HGNC	ENSG00000106536	423	0	0.00	316	153	32.62	-	-	-
PPARGC1B	0	genome.wustl.edu	37	5	149206414	149206414	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	5	149206414	149206414	C	T	SNP	PPARGC1B	ENST00000309241	human	ensembl	69_37n	+1	known	missense	c.431	p.S144L	0.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPARGC1B	HGNC	ENSG00000155846	41	0	0.00	66	9	12.00	-	-	-
PPM1E	0	genome.wustl.edu	37	17	57043169	57043169	+	Nonsense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	17	57043169	57043169	C	G	SNP	PPM1E	ENST00000308249	human	ensembl	69_37n	+1	known	nonsense	c.698	p.S233*	1.000	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1E	HGNC	ENSG00000175175	283	0	0.00	171	62	26.61	-	-	-
PTPRU	0	genome.wustl.edu	37	1	29587268	29587268	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	29587268	29587268	G	A	SNP	PTPRU	ENST00000345512	human	ensembl	69_37n	+1	known	missense	c.997	p.E333K	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRU	HGNC	ENSG00000060656	60	0	0.00	77	19	19.79	-	-	-
RBM8A	0	genome.wustl.edu	37	1	145508273	145508273	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	145508273	145508273	G	T	SNP	RBM8A	ENST00000330165	human	ensembl	69_37n	+1	known	missense	c.194	p.G65V	1.000	prints_RNA-bd_8	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom,prints_RNA-bd_8	-	no_errors	RBM8A	HGNC	ENSG00000131795	244	0	0.00	178	90	33.58	-	-	-
RICTOR	0	genome.wustl.edu	37	5	38944601	38944601	+	Silent	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	5	38944601	38944601	G	C	SNP	RICTOR	ENST00000296782	human	ensembl	69_37n	-1	known	silent	c.4932	p.V1644	0.386	NULL	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327	427	0	0.00	272	40	12.78	-	-	-
RIF1	0	genome.wustl.edu	37	2	152322549	152322549	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	2	152322549	152322549	C	T	SNP	RIF1	ENST00000243326	human	ensembl	69_37n	+1	known	missense	c.6515	p.S2172F	1.000	NULL	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_errors	RIF1	HGNC	ENSG00000080345	132	0	0.00	74	20	21.28	-	-	-
RIPK1	0	genome.wustl.edu	37	6	3081330	3081330	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	6	3081330	3081330	G	A	SNP	RIPK1	ENST00000259808	human	ensembl	69_37n	+1	known	missense	c.439	p.D147N	0.998	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Death,superfamily_Kinase-like_dom,superfamily_DEATH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Death,pfscan_Death,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RIPK1	HGNC	ENSG00000137275	295	0	0.00	193	31	13.84	-	-	-
SARDH	0	genome.wustl.edu	37	9	136595296	136595296	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	9	136595296	136595296	C	T	SNP	SARDH	ENST00000371872	human	ensembl	69_37n	-1	known	missense	c.704	p.C235Y	1.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C	-	no_errors	SARDH	HGNC	ENSG00000123453	133	0	0.00	160	32	16.67	-	-	-
SF3B3	0	genome.wustl.edu	37	16	70569223	70569223	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	16	70569223	70569223	C	T	SNP	SF3B3	ENST00000302516	human	ensembl	69_37n	+1	known	missense	c.725	p.S242L	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C,superfamily_WD40_repeat_dom	-	no_errors	SF3B3	HGNC	ENSG00000189091	297	0	0.00	180	28	13.46	-	-	-
SHROOM3	0	genome.wustl.edu	37	4	77476816	77476816	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	77476816	77476816	G	A	SNP	SHROOM3	ENST00000296043	human	ensembl	69_37n	+1	known	missense	c.223	p.E75K	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	226	0	0.00	156	86	35.39	-	-	-
SHROOM3	0	genome.wustl.edu	37	4	77676338	77676338	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	77676338	77676338	C	T	SNP	SHROOM3	ENST00000296043	human	ensembl	69_37n	+1	known	missense	c.4702	p.R1568C	0.000	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	78	0	0.00	92	24	20.69	-	-	-
SLC17A6	0	genome.wustl.edu	37	11	22391723	22391723	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	11	22391723	22391723	G	A	SNP	SLC17A6	ENST00000263160	human	ensembl	69_37n	+1	known	missense	c.1030	p.E344K	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A6	HGNC	ENSG00000091664	178	0	0.00	73	18	19.78	-	-	-
SMAD2	0	genome.wustl.edu	37	18	45372102	45372102	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	18	45372102	45372102	A	C	SNP	SMAD2	ENST00000262160	human	ensembl	69_37n	-1	known	missense	c.1067	p.F356C	1.000	pfam_SMAD_dom_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD2	HGNC	ENSG00000175387	351	0	0.00	100	110	52.38	-	-	-
SMAD3	0	genome.wustl.edu	37	15	67457304	67457304	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	15	67457304	67457304	G	A	SNP	SMAD3	ENST00000327367	human	ensembl	69_37n	+1	known	missense	c.278	p.R93Q	1.000	pfam_MAD_homology1_Dwarfin-type,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,pfscan_MAD_homology_MH1	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD3	HGNC	ENSG00000166949	61	0	0.00	30	27	47.37	-	-	-
SNAI3	0	genome.wustl.edu	37	16	88747605	88747605	+	Silent	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	16	88747605	88747605	G	A	SNP	SNAI3	ENST00000332281	human	ensembl	69_37n	-1	known	silent	c.594	p.L198	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI3	HGNC	ENSG00000185669	105	0	0.00	76	43	36.13	-	-	-
SNX7	0	genome.wustl.edu	37	1	99150448	99150448	+	Nonsense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	99150448	99150448	C	G	SNP	SNX7	ENST00000306121	human	ensembl	69_37n	+1	known	nonsense	c.188	p.S63*	0.996	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX7	HGNC	ENSG00000162627	348	0	0.00	181	41	18.47	-	-	-
SPARCL1	0	genome.wustl.edu	37	4	88415072	88415072	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	88415072	88415072	G	A	SNP	SPARCL1	ENST00000282470	human	ensembl	69_37n	-1	known	nonsense	c.880	p.Q294*	0.514	pirsf_SPARC-like_p1	pfam_SPARC/Testican_Ca-bd-dom,pfam_Prot_inh_Kazal,pfam_Kazal-type_dom,pfam_Follistatin/Osteonectin_EGF,smart_Fol_N,smart_Prot_inh_Kazal,pirsf_SPARC-like_p1,pfscan_EF_HAND_2	-	no_errors	SPARCL1	HGNC	ENSG00000152583	680	0	0.00	530	123	18.81	-	-	-
SPINT3	0	genome.wustl.edu	37	20	44141314	44141314	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	20	44141314	44141314	C	A	SNP	SPINT3	ENST00000217428	human	ensembl	69_37n	-1	known	nonsense	c.247	p.E83*	0.001	pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	SPINT3	HGNC	ENSG00000101446	245	1	0.41	189	43	18.53	-	-	-
SPRR2F	0	genome.wustl.edu	37	1	153085068	153085068	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	153085068	153085068	G	A	SNP	SPRR2F	ENST00000468739	human	ensembl	69_37n	-1	known	nonsense	c.142	p.Q48*	0.007	NULL	NULL	-	no_errors	SPRR2F	HGNC	ENSG00000244094	541	0	0.00	498	265	34.69	-	-	-
SZRD1	0	genome.wustl.edu	37	1	16719813	16719813	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	16719813	16719813	G	C	SNP	SZRD1	ENST00000375590	human	ensembl	69_37n	+1	known	missense	c.132	p.K44N	1.000	NULL	NULL	-	no_errors	SZRD1	HGNC	ENSG00000055070	95	0	0.00	67	15	18.29	-	-	-
TACR1	0	genome.wustl.edu	37	2	75280858	75280858	+	Silent	SNP	C	C	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	2	75280858	75280858	C	A	SNP	TACR1	ENST00000305249	human	ensembl	69_37n	-1	known	silent	c.609	p.L203	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Neurokn_rcpt,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_NK1_rcpt,prints_Neurokn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NK3_rcpt	-	no_errors	TACR1	HGNC	ENSG00000115353	251	0	0.00	156	40	20.41	-	-	-
TAF1B	0	genome.wustl.edu	37	2	10050972	10050972	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	2	10050972	10050972	G	A	SNP	TAF1B	ENST00000263663	human	ensembl	69_37n	+1	known	missense	c.1063	p.D355N	1.000	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750	453	0	0.00	265	55	17.19	-	-	-
TARS	0	genome.wustl.edu	37	5	33459816	33459816	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	5	33459816	33459816	G	A	SNP	TARS	ENST00000265112	human	ensembl	69_37n	+1	known	missense	c.1100	p.R367K	1.000	pfam_aa-tRNA-synt_IIb_cons-dom,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-synth_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,prints_Thr-tRNA-synth_IIa,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-synth_IIa	-	no_errors	TARS	HGNC	ENSG00000113407	185	0	0.00	123	42	25.45	-	-	-
TEAD1	0	genome.wustl.edu	37	11	12785961	12785961	+	Nonsense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	11	12785961	12785961	C	G	SNP	TEAD1	ENST00000361905	human	ensembl	69_37n	+1	known	nonsense	c.137	p.S46*	1.000	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD1	HGNC	ENSG00000187079	248	0	0.00	118	22	15.71	-	-	-
THBS3	0	genome.wustl.edu	37	1	155165801	155165801	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	1	155165801	155165801	G	C	SNP	THBS3	ENST00000368378	human	ensembl	69_37n	-1	known	missense	c.2789	p.S930C	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	THBS3	HGNC	ENSG00000169231	299	0	0.00	277	50	15.29	-	-	-
THSD7B	0	genome.wustl.edu	37	2	137814238	137814238	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	2	137814238	137814238	G	C	SNP	THSD7B	ENST00000272643	human	ensembl	69_37n	+1	known	missense	c.388	p.E130Q	0.547	superfamily_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	172	0	0.00	115	39	25.32	-	-	-
TMEM189-UBE2V1	0	genome.wustl.edu	37	20	48699337	48699337	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	20	48699337	48699337	G	A	SNP	TMEM189-UBE2V1	ENST00000341698	human	ensembl	69_37n	-1	known	nonsense	c.1081	p.Q361*	1.000	superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_KuaUb-conj-enz_UEV1,pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	TMEM189-UBE2V1	HGNC	ENSG00000124208	488	0	0.00	438	70	13.78	-	-	-
TP53	0	genome.wustl.edu	37	17	7578536	7578536	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	17	7578536	7578536	T	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.394	p.K132E	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	130	0	0.00	54	54	50.00	-	-	-
TPPP	0	genome.wustl.edu	37	5	666230	666230	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	5	666230	666230	G	A	SNP	TPPP	ENST00000360578	human	ensembl	69_37n	-1	known	missense	c.320	p.S107F	1.000	pfam_P25-alpha	pfam_P25-alpha	-	no_errors	TPPP	HGNC	ENSG00000171368	71	0	0.00	109	19	14.84	-	-	-
TSC22D2	0	genome.wustl.edu	37	3	150127372	150127372	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	3	150127372	150127372	G	C	SNP	TSC22D2	ENST00000361875	human	ensembl	69_37n	+1	known	missense	c.235	p.E79Q	1.000	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D2	HGNC	ENSG00000196428	30	0	0.00	28	13	31.71	-	-	-
TSGA13	0	genome.wustl.edu	37	7	130364154	130364154	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	130364154	130364154	G	C	SNP	TSGA13	ENST00000356588	human	ensembl	69_37n	-1	known	missense	c.226	p.Q76E	0.015	NULL	NULL	-	no_errors	TSGA13	HGNC	ENSG00000213265	664	0	0.00	609	115	15.88	-	-	-
TTC18	0	genome.wustl.edu	37	10	75034278	75034278	+	Nonsense_Mutation	SNP	A	A	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	10	75034278	75034278	A	C	SNP	TTC18	ENST00000310715	human	ensembl	69_37n	-1	known	nonsense	c.2958	p.Y986*	0.999	smart_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC18	HGNC	ENSG00000156042	372	0	0.00	248	57	18.69	-	-	-
UBTD2	0	genome.wustl.edu	37	5	171639034	171639034	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	5	171639034	171639034	G	A	SNP	UBTD2	ENST00000393792	human	ensembl	69_37n	-1	known	missense	c.505	p.R169C	1.000	pfam_Ubiquitin,pfam_SUMO,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin,pfam_SUMO,pfscan_Ubiquitin_supergroup	-	no_errors	UBTD2	HGNC	ENSG00000168246	303	0	0.00	243	57	19.00	-	-	-
UGT2B10	0	genome.wustl.edu	37	4	69681927	69681927	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	4	69681927	69681927	G	C	SNP	UGT2B10	ENST00000265403	human	ensembl	69_37n	+1	known	missense	c.190	p.D64H	0.011	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B10	HGNC	ENSG00000109181	155	0	0.00	110	23	17.29	-	-	-
UNC13C	0	genome.wustl.edu	37	15	54793090	54793090	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	15	54793090	54793090	C	T	SNP	UNC13C	ENST00000260323	human	ensembl	69_37n	+1	known	nonsense	c.5215	p.Q1739*	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_Ca-dep,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	367	0	0.00	201	77	27.70	-	-	-
VSIG1	0	genome.wustl.edu	37	X	107301404	107301404	+	Silent	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	X	107301404	107301404	C	T	SNP	VSIG1	ENST00000415430	human	ensembl	69_37n	+1	known	silent	c.186	p.F62	0.002	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	VSIG1	HGNC	ENSG00000101842	543	0	0.00	441	92	17.26	-	-	-
WDR96	0	genome.wustl.edu	37	10	105965792	105965792	+	Splice_Site	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	10	105965792	105965792	C	G	SNP	WDR96	ENST00000428666	human	ensembl	69_37n	-1	known	splice_site	c.896-1	e7-1	0.017	-	-	-	no_errors	WDR96	HGNC	ENSG00000197748	224	0	0.00	113	54	32.34	-	-	-
ZBTB46	0	genome.wustl.edu	37	20	62421337	62421337	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	20	62421337	62421337	C	G	SNP	ZBTB46	ENST00000245663	human	ensembl	69_37n	-1	known	missense	c.774	p.Q258H	0.969	NULL	pfam_BTB_POZ,pfam_DUF3342,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB46	HGNC	ENSG00000130584	109	0	0.00	127	28	17.95	-	-	-
ZNF462	0	genome.wustl.edu	37	9	109689136	109689136	+	Silent	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	9	109689136	109689136	G	A	SNP	ZNF462	ENST00000457913	human	ensembl	69_37n	+1	known	silent	c.2943	p.L981	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143	215	0	0.00	181	46	20.26	-	-	-
ZNF469	0	genome.wustl.edu	37	16	88504833	88504833	+	Nonsense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	16	88504833	88504833	C	G	SNP	ZNF469	ENST00000437464	human	ensembl	69_37n	+1	known	nonsense	c.10871	p.S3624*	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	15	0	0.00	22	7	24.14	-	-	-
ZNF48	0	genome.wustl.edu	37	16	30409375	30409375	+	Silent	SNP	G	G	A			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	16	30409375	30409375	G	A	SNP	ZNF48	ENST00000320159	human	ensembl	69_37n	+1	known	silent	c.804	p.P268	0.289	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF48	HGNC	ENSG00000180035	84	0	0.00	76	16	17.39	-	-	-
ZNF480	0	genome.wustl.edu	37	19	52825581	52825581	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	52825581	52825581	C	T	SNP	ZNF480	ENST00000468240	human	ensembl	69_37n	+1	known	nonsense	c.1078	p.R360*	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF480	HGNC	ENSG00000198464	117	0	0.00	69	8	10.39	-	-	-
ZNF609	0	genome.wustl.edu	37	15	64792007	64792007	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	15	64792007	64792007	A	G	SNP	ZNF609	ENST00000326648	human	ensembl	69_37n	+1	known	missense	c.389	p.N130S	0.993	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357	186	1	0.53	78	69	46.94	-	-	-
ZNF786	0	genome.wustl.edu	37	7	148767652	148767652	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	7	148767652	148767652	C	T	SNP	ZNF786	ENST00000491431	human	ensembl	69_37n	-1	known	missense	c.2212	p.G738R	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF786	HGNC	ENSG00000197362	317	0	0.00	203	118	36.65	-	-	-
ZSCAN5A	0	genome.wustl.edu	37	19	56735124	56735124	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b266b370-425c-4146-8b72-59248436618e	61e9e215-f15b-4968-9afc-4931ad991c80	19	56735124	56735124	C	G	SNP	ZSCAN5A	ENST00000391713	human	ensembl	69_37n	-1	known	missense	c.464	p.R155T	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5A	HGNC	ENSG00000131848	113	0	0.00	160	20	11.11	-	-	-
