Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AHCTF1	0	genome.wustl.edu	37	1	247016578	247016578	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	1	247016578	247016578	C	T	SNP	AHCTF1	ENST00000326225	human	ensembl	69_37n	-1	known	missense	c.4405	p.G1469S	0.102	NULL	superfamily_Quinonprotein_ADH-like	-	no_errors	AHCTF1	HGNC	ENSG00000153207	34	0	0.00	43	20	31.75	-	-	-
APBA1	0	genome.wustl.edu	37	9	72073092	72073092	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	9	72073092	72073092	A	C	SNP	APBA1	ENST00000265381	human	ensembl	69_37n	-1	known	missense	c.1495	p.L499V	1.000	pfam_PTyr_interaction_dom,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom	pfam_PTyr_interaction_dom,pfam_PDZ,superfamily_PDZ,smart_PTyr_interaction_dom,smart_PDZ,pfscan_PDZ,pfscan_PTyr_interaction_dom	-	no_errors	APBA1	HGNC	ENSG00000107282	86	0	0.00	62	15	19.48	-	-	-
C7orf63	0	genome.wustl.edu	37	7	89938682	89938683	+	Splice_Site	INS	-	-	T			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	7	89938682	89938683	-	T	INS	C7orf63	ENST00000389297	human	ensembl	69_37n	+1	known	splice_site_ins	c.2655+1_2655+1	e22+1	1.000:1.000	-	-	-	no_errors	C7orf63	HGNC	ENSG00000105792	37	0	0.00	24	6	20.00	-	-	-
COQ5	0	genome.wustl.edu	37	12	120966842	120966842	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	12	120966842	120966842	C	A	SNP	COQ5	ENST00000288532	human	ensembl	69_37n	-1	known	missense	c.103	p.G35W	0.000	NULL	pfam_UbiE/COQ5_MeTrFase,pfam_Methyltransf_11,pfam_Methyltransf_12,tigrfam_UbiE/COQ5_MeTrFase	-	no_errors	COQ5	HGNC	ENSG00000110871	42	0	0.00	44	7	13.73	-	-	-
EHBP1	0	genome.wustl.edu	37	2	63206352	63206353	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	2	63206352	63206353	GA	-	DEL	EHBP1	ENST00000263991	human	ensembl	69_37n	+1	known	frame_shift_del	c.2595_2596	p.R868fs	1.000:1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1	HGNC	ENSG00000115504	29	0	0.00	25	3	10.71	-	-	-
HS6ST1	0	genome.wustl.edu	37	2	129075877	129075877	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	2	129075877	129075877	G	T	SNP	HS6ST1	ENST00000259241	human	ensembl	69_37n	-1	known	missense	c.261	p.D87E	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	13	0	0.00	8	7	46.67	-	-	-
KCNA4	0	genome.wustl.edu	37	11	30033418	30033418	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	11	30033418	30033418	G	A	SNP	KCNA4	ENST00000328224	human	ensembl	69_37n	-1	known	missense	c.808	p.R270W	1.000	superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv1	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255	24	0	0.00	14	5	26.32	-	-	-
KLHL31	0	genome.wustl.edu	37	6	53519409	53519409	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	6	53519409	53519409	A	C	SNP	KLHL31	ENST00000370905	human	ensembl	69_37n	-1	known	missense	c.662	p.I221R	0.954	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_DUF1668_ORYSA,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL31	HGNC	ENSG00000124743	52	0	0.00	30	6	16.67	-	-	-
KRAS	0	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	12	25398284	25398284	C	T	SNP	KRAS	ENST00000256078	human	ensembl	69_37n	-1	known	missense	c.35	p.G12D	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703	69	0	0.00	35	8	18.60	-	-	-
NR4A2	0	genome.wustl.edu	37	2	157186269	157186269	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	2	157186269	157186269	C	-	DEL	NR4A2	ENST00000539077	human	ensembl	69_37n	-1	known	frame_shift_del	c.463	p.D155fs	1.000	prints_NURR_rcpt,prints_Nuc_orph_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NURR_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A2	HGNC	ENSG00000153234	39	0	0.00	29	5	14.29	-	-	-
PARP4	0	genome.wustl.edu	37	13	25021263	25021263	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	13	25021263	25021263	T	C	SNP	PARP4	ENST00000381989	human	ensembl	69_37n	-1	known	missense	c.3176	p.Q1059R	1.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_VIT,pfam_VWF_A,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_BRCT_dom,smart_BRCT_dom,smart_VIT,smart_VWF_A,pfscan_BRCT_dom,pfscan_VWF_A,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP4	HGNC	ENSG00000102699	35	0	0.00	22	5	18.52	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	44	0	0.00	25	5	16.67	-	-	-
PLA2G1B	0	genome.wustl.edu	37	12	120763747	120763747	+	Silent	SNP	C	C	A			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	12	120763747	120763747	C	A	SNP	PLA2G1B	ENST00000308366	human	ensembl	69_37n	-1	known	silent	c.111	p.G37	0.028	pfam_PLipase_A2_euk,superfamily_PLipase_A2,smart_PLipase_A2	pfam_PLipase_A2_euk,superfamily_PLipase_A2,smart_PLipase_A2,prints_PLipase_A2_euk	-	no_errors	PLA2G1B	HGNC	ENSG00000170890	40	0	0.00	29	8	21.62	-	-	-
PPP1R12B	0	genome.wustl.edu	37	1	202411672	202411672	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	1	202411672	202411672	T	C	SNP	PPP1R12B	ENST00000336894	human	ensembl	69_37n	+1	known	missense	c.1639	p.S547P	0.996	pirsf_Pase-1_reg_su_12A/B/C_euk	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_12A/B/C_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R12B	HGNC	ENSG00000077157	41	0	0.00	39	6	13.33	-	-	-
TBX3	0	genome.wustl.edu	37	12	115120669	115120669	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	12	115120669	115120669	A	G	SNP	TBX3	ENST00000257566	human	ensembl	69_37n	-1	known	missense	c.337	p.W113R	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX3	HGNC	ENSG00000135111	11	0	0.00	8	4	33.33	-	-	-
WDR96	0	genome.wustl.edu	37	10	105990439	105990439	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	10	105990439	105990439	G	-	DEL	WDR96	ENST00000357060	human	ensembl	69_37n	-1	known	frame_shift_del	c.228	p.C77fs	0.000	superfamily_Quino_amine_DH_bsu	superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu	-	no_errors	WDR96	HGNC	ENSG00000197748	66	0	0.00	40	8	16.67	-	-	-
ZNF747	0	genome.wustl.edu	37	16	30545573	30545573	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A1IF-01A-11D-A142-09	TCGA-E2-A1IF-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7751c2d5-e548-4439-aac1-e7b9dce97583	34cbed4d-6aff-4293-8f12-931ad2f174ca	16	30545573	30545573	C	T	SNP	ZNF747	ENST00000535210	human	ensembl	69_37n	-1	known	nonsense	c.288	p.W96*	0.967	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955	13	0	0.00	10	10	50.00	-	-	-
