Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AMPD2	0	genome.wustl.edu	37	1	110168296	110168296	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	1	110168296	110168296	C	T	SNP	AMPD2	ENST00000256578	human	ensembl	69_37n	+1	known	missense	c.397	p.R133C	1.000	pirsf_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD2	HGNC	ENSG00000116337	36	0	0.00	29	19	39.58	-	-	-
ANXA6	0	genome.wustl.edu	37	5	150509044	150509044	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	5	150509044	150509044	C	T	SNP	ANXA6	ENST00000354546	human	ensembl	69_37n	-1	known	missense	c.842	p.R281H	1.000	pfam_Annexin_repeat,superfamily_Annexin,smart_Annexin_repeat,prints_Annexin	pfam_Annexin_repeat,superfamily_Annexin,smart_Annexin_repeat,prints_Annexin,prints_AnnexinVI,prints_AnnexinIV	-	no_errors	ANXA6	HGNC	ENSG00000197043	38	0	0.00	62	7	10.14	-	-	-
AP1M2	0	genome.wustl.edu	37	19	10689625	10689625	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	19	10689625	10689625	G	C	SNP	AP1M2	ENST00000590923	human	ensembl	69_37n	-1	known	missense	c.837	p.I279M	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP1M2	HGNC	ENSG00000129354	54	0	0.00	50	18	26.47	-	-	-
ATP11B	0	genome.wustl.edu	37	3	182566341	182566341	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	3	182566341	182566341	G	C	SNP	ATP11B	ENST00000323116	human	ensembl	69_37n	+1	known	missense	c.847	p.E283Q	1.000	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP11B	HGNC	ENSG00000058063	72	0	0.00	35	14	28.57	-	-	-
BRIP1	0	genome.wustl.edu	37	17	59871074	59871074	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	17	59871074	59871074	C	T	SNP	BRIP1	ENST00000259008	human	ensembl	69_37n	-1	known	missense	c.1357	p.A453T	0.998	tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_TIL_dom,smart_Helicase-like_DEXD_c2,smart_Helicase_ATP-bd,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	BRIP1	HGNC	ENSG00000136492	38	0	0.00	45	25	35.21	-	-	-
CACNA2D2	0	genome.wustl.edu	37	3	50404847	50404847	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	3	50404847	50404847	G	A	SNP	CACNA2D2	ENST00000435965	human	ensembl	69_37n	-1	known	silent	c.2400	p.V800	1.000	NULL	pfam_VWA_N,pfam_VDCC_a2/dsu,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D2	HGNC	ENSG00000007402	47	0	0.00	45	29	39.19	-	-	-
CASZ1	0	genome.wustl.edu	37	1	10709343	10709343	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	1	10709343	10709343	C	T	SNP	CASZ1	ENST00000377022	human	ensembl	69_37n	-1	known	missense	c.3032	p.R1011H	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	35	0	0.00	10	6	37.50	-	-	-
DDX4	0	genome.wustl.edu	37	5	55094277	55094277	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	5	55094277	55094277	C	T	SNP	DDX4	ENST00000505374	human	ensembl	69_37n	+1	known	missense	c.1493	p.S498L	0.003	smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX4	HGNC	ENSG00000152670	153	1	0.65	188	69	26.85	-	-	-
DHX37	0	genome.wustl.edu	37	12	125449009	125449009	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	12	125449009	125449009	C	A	SNP	DHX37	ENST00000308736	human	ensembl	69_37n	-1	known	missense	c.1976	p.W659L	1.000	pfam_Helicase_C,smart_Helicase_C,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX37	HGNC	ENSG00000150990	46	0	0.00	32	15	31.91	-	-	-
DNAL1	0	genome.wustl.edu	37	14	74156135	74156135	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	14	74156135	74156135	A	G	SNP	DNAL1	ENST00000553645	human	ensembl	69_37n	+1	known	missense	c.449	p.N150S	1.000	NULL	NULL	-	no_errors	DNAL1	HGNC	ENSG00000119661	67	0	0.00	62	20	24.39	-	-	-
ELF2	0	genome.wustl.edu	37	4	139981717	139981717	+	Silent	SNP	G	G	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	4	139981717	139981717	G	T	SNP	ELF2	ENST00000379550	human	ensembl	69_37n	-1	known	silent	c.918	p.T306	0.863	NULL	pfam_TF_Elf_N,pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ELF2	HGNC	ENSG00000109381	51	0	0.00	31	21	40.38	-	-	-
FBLN2	0	genome.wustl.edu	37	3	13669372	13669372	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	3	13669372	13669372	G	A	SNP	FBLN2	ENST00000404922	human	ensembl	69_37n	+1	known	silent	c.2472	p.P824	0.000	pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like	pfam_EGF-like_Ca-bd,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_,smart_EGF-like,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520	27	0	0.00	22	13	37.14	-	-	-
HEY1	0	genome.wustl.edu	37	8	80677525	80677525	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	8	80677525	80677525	G	A	SNP	HEY1	ENST00000337919	human	ensembl	69_37n	-1	known	silent	c.825	p.F275	0.997	NULL	pfam_HLH_DNA-bd,pfam_Orange,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,smart_Orange_subgr,pfscan_Orange,pfscan_HLH_DNA-bd	-	no_errors	HEY1	HGNC	ENSG00000164683	44	0	0.00	50	27	35.06	-	-	-
HLA-DRB1	0	genome.wustl.edu	37	6	32549548	32549548	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	6	32549548	32549548	G	A	SNP	HLA-DRB1	ENST00000360004	human	ensembl	69_37n	-1	known	silent	c.438	p.C146	1.000	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DRB1	HGNC	ENSG00000196126	37	0	0.00	81	18	18.18	-	-	-
HLA-DRB1	0	genome.wustl.edu	37	6	32549563	32549563	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	6	32549563	32549563	G	A	SNP	HLA-DRB1	ENST00000360004	human	ensembl	69_37n	-1	known	silent	c.423	p.H141	1.000	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DRB1	HGNC	ENSG00000196126	34	0	0.00	82	18	18.00	-	-	-
IGHA1	0	genome.wustl.edu	37	14	106174399	106174399	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	14	106174399	106174399	G	T	SNP	IGHA1	ENST00000390547	human	ensembl	69_37n	-1	known	missense	c.390	p.H130Q	0.005	pfscan_Ig-like	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like	-	no_start_codon	IGHA1	HGNC	ENSG00000211895	59	0	0.00	53	36	40.45	-	-	-
IREB2	0	genome.wustl.edu	37	15	78783006	78783006	+	Missense_Mutation	SNP	T	T	G			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	15	78783006	78783006	T	G	SNP	IREB2	ENST00000258886	human	ensembl	69_37n	+1	known	missense	c.2227	p.L743V	0.407	superfamily_Aconitase/3IPM_dehydase_swvl,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381	66	0	0.00	60	8	11.76	-	-	-
ITPKB	0	genome.wustl.edu	37	1	226924884	226924885	+	In_Frame_Ins	INS	-	-	CCA			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	1	226924884	226924885	-	CCA	INS	ITPKB	ENST00000272117	human	ensembl	69_37n	-1	known	in_frame_ins	c.276_275	p.93in_frame_insG	0.091:0.097	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772	12	0	0.00	5	2	28.57	-	-	-
KGFLP2	0	genome.wustl.edu	37	9	41962602	41962602	+	RNA	SNP	G	G	C			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	9	41962602	41962602	G	C	SNP	KGFLP2	ENST00000454645	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RP11-204M4.2	Clone_based_vega_gene	ENSG00000204837	42	0	0.00	68	10	12.82	-	-	-
MAMDC4	0	genome.wustl.edu	37	9	139752492	139752492	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	9	139752492	139752492	C	A	SNP	MAMDC4	ENST00000445819	human	ensembl	69_37n	+1	known	missense	c.2763	p.H921Q	0.000	pfam_MAM_dom,superfamily_ConA-like_lec_gl,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom	-	no_errors	MAMDC4	HGNC	ENSG00000177943	13	0	0.00	2	4	66.67	-	-	-
MEN1	0	genome.wustl.edu	37	11	64572092	64572093	+	Frame_Shift_Ins	INS	-	-	G			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	11	64572092	64572093	-	G	INS	MEN1	ENST00000337652	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1562_1561	p.R521fs	1.000:0.999	pfam_Menin	pfam_Menin	-	no_errors	MEN1	HGNC	ENSG00000133895	21	0	0.00	14	16	53.33	-	-	-
MMGT1	0	genome.wustl.edu	37	X	135053263	135053263	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	X	135053263	135053263	G	A	SNP	MMGT1	ENST00000433339	human	ensembl	69_37n	-1	known	missense	c.281	p.S94F	1.000	pfam_Magnesium_transport	pfam_Magnesium_transport	-	no_errors	MMGT1	HGNC	ENSG00000169446	88	0	0.00	89	10	10.10	-	-	-
MTOR	0	genome.wustl.edu	37	1	11294317	11294317	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	1	11294317	11294317	C	G	SNP	MTOR	ENST00000361445	human	ensembl	69_37n	-1	known	missense	c.2214	p.L738F	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_FKBP_rapamycin-assoc_FKBP12-bd,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_FKBP_rapamycin-assoc_FKBP12-bd,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793	65	0	0.00	38	15	28.30	-	-	-
MUC16	0	genome.wustl.edu	37	19	9070657	9070657	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	19	9070657	9070657	C	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.16789	p.V5597M	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	56	0	0.00	56	32	36.36	-	-	-
MYF5	0	genome.wustl.edu	37	12	81111126	81111126	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	12	81111126	81111126	G	A	SNP	MYF5	ENST00000228644	human	ensembl	69_37n	+1	known	missense	c.284	p.R95H	1.000	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	pfam_Basic,pfam_Myf5,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_Basic,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	MYF5	HGNC	ENSG00000111049	22	0	0.00	10	7	41.18	-	-	-
NFE2L3	0	genome.wustl.edu	37	7	26224525	26224525	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	7	26224525	26224525	T	A	SNP	NFE2L3	ENST00000056233	human	ensembl	69_37n	+1	known	missense	c.1207	p.F403I	0.364	NULL	pfam_bZIP_1,pfam_bZIP_Maf,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L3	HGNC	ENSG00000050344	54	0	0.00	41	16	28.07	-	-	-
NID1	0	genome.wustl.edu	37	1	236156947	236156947	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	1	236156947	236156947	G	A	SNP	NID1	ENST00000264187	human	ensembl	69_37n	-1	known	missense	c.2753	p.P918L	0.763	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd,superfamily_Green_fluorescent_prot-like,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd,smart_EGF-like,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962	13	0	0.00	4	5	55.56	-	-	-
NME7	0	genome.wustl.edu	37	1	169279296	169279296	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	1	169279296	169279296	C	T	SNP	NME7	ENST00000367811	human	ensembl	69_37n	-1	known	missense	c.301	p.D101N	1.000	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,pirsf_NDK7	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Uncharacterised_DM10,smart_Nucleoside_diP_kinase,pirsf_NDK7,prints_Nucleoside_diP_kinase	-	no_errors	NME7	HGNC	ENSG00000143156	84	0	0.00	75	65	46.43	-	-	-
PCDHGA3	0	genome.wustl.edu	37	5	140725490	140725490	+	Silent	SNP	A	A	C			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	5	140725490	140725490	A	C	SNP	PCDHGA3	ENST00000253812	human	ensembl	69_37n	+1	known	silent	c.1890	p.R630	0.688	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245	29	0	0.00	26	5	16.13	-	-	-
PIF1	0	genome.wustl.edu	37	15	65114690	65114690	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	15	65114690	65114690	G	A	SNP	PIF1	ENST00000333425	human	ensembl	69_37n	-1	known	silent	c.678	p.F226	1.000	NULL	pfam_DNA_helicase_PIF1,pfam_DNA_helicase	-	no_errors	PIF1	HGNC	ENSG00000140451	39	0	0.00	24	8	25.00	-	-	-
PPP1R12A	0	genome.wustl.edu	37	12	80199488	80199488	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	12	80199488	80199488	C	T	SNP	PPP1R12A	ENST00000553081	human	ensembl	69_37n	-1	novel	missense	c.659	p.R220Q	0.996	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon	PPP1R12A	HGNC	ENSG00000058272	81	0	0.00	80	30	27.27	-	-	-
PRDM6	0	genome.wustl.edu	37	5	122506701	122506701	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	5	122506701	122506701	G	A	SNP	PRDM6	ENST00000407847	human	ensembl	69_37n	+1	known	silent	c.1395	p.S465	0.996	NULL	pfam_Znf_C2H2,pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM6	HGNC	ENSG00000061455	52	0	0.00	18	21	53.85	-	-	-
SALL3	0	genome.wustl.edu	37	18	76754213	76754213	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	18	76754213	76754213	G	A	SNP	SALL3	ENST00000537592	human	ensembl	69_37n	+1	known	missense	c.2222	p.C741Y	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463	30	0	0.00	19	25	56.82	-	-	-
SFXN5	0	genome.wustl.edu	37	2	73249692	73249692	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	2	73249692	73249692	G	C	SNP	SFXN5	ENST00000272433	human	ensembl	69_37n	-1	known	missense	c.290	p.P97R	1.000	pfam_Mtc,tigrfam_Mtc	pfam_Mtc,tigrfam_Mtc	-	no_errors	SFXN5	HGNC	ENSG00000144040	77	0	0.00	19	11	36.67	-	-	-
SLC35F3	0	genome.wustl.edu	37	1	234041449	234041449	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	1	234041449	234041449	G	A	SNP	SLC35F3	ENST00000366618	human	ensembl	69_37n	+1	known	silent	c.228	p.R76	1.000	NULL	pfam_DMT,pfam_DUF250,pfam_DUF914_euk	-	no_errors	SLC35F3	HGNC	ENSG00000183780	29	0	0.00	5	4	44.44	-	-	-
SOGA1	0	genome.wustl.edu	37	20	35443721	35443721	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	20	35443721	35443721	C	A	SNP	SOGA1	ENST00000357779	human	ensembl	69_37n	-1	known	missense	c.1410	p.K470N	1.000	NULL	pfam_DUF3166	-	no_errors	SOGA1	HGNC	ENSG00000149639	39	0	0.00	30	5	14.29	-	-	-
STRADA	0	genome.wustl.edu	37	17	61788157	61788157	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	17	61788157	61788157	T	C	SNP	STRADA	ENST00000336174	human	ensembl	69_37n	-1	known	missense	c.388	p.I130V	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	STRADA	HGNC	ENSG00000266173	90	0	0.00	117	51	30.36	-	-	-
STXBP6	0	genome.wustl.edu	37	14	25288273	25288273	+	Silent	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	14	25288273	25288273	G	A	SNP	STXBP6	ENST00000323944	human	ensembl	69_37n	-1	known	silent	c.579	p.S193	0.989	pfam_Synaptobrevin,pfscan_Synaptobrevin	pfam_Synaptobrevin,pfscan_Synaptobrevin	-	no_errors	STXBP6	HGNC	ENSG00000168952	81	0	0.00	48	16	25.00	-	-	-
SYNJ1	0	genome.wustl.edu	37	21	34014274	34014274	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	21	34014274	34014274	G	A	SNP	SYNJ1	ENST00000433931	human	ensembl	69_37n	-1	known	missense	c.3637	p.R1213C	0.998	NULL	pfam_Syja_N,pfam_Endo/exonuclease/phosphatase,pfam_DUF1866,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ1	HGNC	ENSG00000159082	80	0	0.00	55	40	42.11	-	-	-
TOX4	0	genome.wustl.edu	37	14	21963403	21963403	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	14	21963403	21963403	C	T	SNP	TOX4	ENST00000262709	human	ensembl	69_37n	+1	known	nonsense	c.1657	p.Q553*	1.000	NULL	pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	TOX4	HGNC	ENSG00000092203	79	0	0.00	69	32	31.68	-	-	-
TTLL2	0	genome.wustl.edu	37	6	167754327	167754327	+	Missense_Mutation	SNP	A	A	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	6	167754327	167754327	A	T	SNP	TTLL2	ENST00000239587	human	ensembl	69_37n	+1	known	missense	c.939	p.K313N	0.973	pfam_Tub_tyr_ligase	pfam_Tub_tyr_ligase	-	no_errors	TTLL2	HGNC	ENSG00000120440	80	0	0.00	26	48	64.86	-	-	-
VPS26A	0	genome.wustl.edu	37	10	70917832	70917832	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	10	70917832	70917832	G	A	SNP	VPS26A	ENST00000263559	human	ensembl	69_37n	+1	known	missense	c.416	p.R139K	1.000	pfam_VPS26	pfam_VPS26	-	no_errors	VPS26A	HGNC	ENSG00000122958	69	0	0.00	70	14	16.67	-	-	-
VWA3A	0	genome.wustl.edu	37	16	22152977	22152977	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	16	22152977	22152977	C	T	SNP	VWA3A	ENST00000389398	human	ensembl	69_37n	+1	known	missense	c.2458	p.L820F	0.326	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3A	HGNC	ENSG00000175267	45	0	0.00	56	21	27.27	-	-	-
ZNF461	0	genome.wustl.edu	37	19	37134740	37134740	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A228-01A-31D-A159-09	TCGA-E9-A228-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a804a8d-7dc8-4b5b-9537-b7f8f7133bda	c618a148-78cb-425d-b026-e2f1c10773bd	19	37134740	37134740	T	C	SNP	ZNF461	ENST00000588268	human	ensembl	69_37n	-1	known	missense	c.257	p.H86R	0.054	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF461	HGNC	ENSG00000197808	63	0	0.00	55	22	28.57	-	-	-
