Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-BK-A26L-01C-04D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B08_1347348	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B08_1347348.nocnv_hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.143.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2015040200	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2015040200.0.0	yes
TCGA-BK-A139-10A-01D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C03_1347492	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C03_1347492.nocnv_hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.92.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2015040200	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2015040200.0.0	yes
TCGA-BK-A0CA-10A-02D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B12_1347408	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B12_1347408.nocnv_hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.92.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2015040200	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2015040200.0.0	yes
TCGA-BK-A0CA-01B-02D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B11_1347494	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B11_1347494.nocnv_hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.92.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2015040200	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2015040200.0.0	yes
TCGA-BK-A139-01C-08D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C02_1347456	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C02_1347456.nocnv_hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.92.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2015040200	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2015040200.0.0	yes
TCGA-BK-A0CC-01B-04D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C08_1347480	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C08_1347480.nocnv_hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.49.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2015040200	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2015040200.0.0	yes
TCGA-BK-A26L-10A-01D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B09_1347386	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B09_1347386.nocnv_hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.143.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2015040200	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2015040200.0.0	yes
