Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AHDC1	0	genome.wustl.edu	37	1	27875711	27875711	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	1	27875711	27875711	G	-	DEL	AHDC1	ENST00000247087	human	ensembl	69_37n	-1	known	frame_shift_del	c.2916	p.G973fs	0.041	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705	22	0	0.00	4	2	33.33	-	-	-
ATP1A4	0	genome.wustl.edu	37	1	160144388	160144388	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	1	160144388	160144388	C	T	SNP	ATP1A4	ENST00000368081	human	ensembl	69_37n	+1	known	missense	c.2162	p.T721I	0.999	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP1A4	HGNC	ENSG00000132681	106	1	0.93	31	35	53.03	-	-	-
CLEC12A	0	genome.wustl.edu	37	12	10134654	10134654	+	Silent	SNP	T	T	C			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	12	10134654	10134654	T	C	SNP	CLEC12A	ENST00000355690	human	ensembl	69_37n	+1	known	silent	c.597	p.Y199	0.826	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12A	HGNC	ENSG00000172322	199	0	0.00	89	23	20.54	-	-	-
CP	0	genome.wustl.edu	37	3	148896320	148896320	+	Silent	SNP	A	A	G			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	3	148896320	148896320	A	G	SNP	CP	ENST00000264613	human	ensembl	69_37n	-1	known	silent	c.2760	p.F920	0.994	superfamily_Cupredoxin	pfam_Cu-oxidase_2,pfam_Cu-oxidase_3,pfam_Cu-oxidase,superfamily_Cupredoxin	-	no_errors	CP	HGNC	ENSG00000047457	229	0	0.00	190	71	27.20	-	-	-
CSMD1	0	genome.wustl.edu	37	8	3076793	3076793	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	8	3076793	3076793	G	A	SNP	CSMD1	ENST00000335551	human	ensembl	69_37n	-1	novel	missense	c.3097	p.R1033C	0.975	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,smart_CUB,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CSMD1	HGNC	ENSG00000183117	110	0	0.00	38	15	28.30	-	-	-
DCST1	0	genome.wustl.edu	37	1	155020578	155020578	+	Nonsense_Mutation	SNP	A	A	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	1	155020578	155020578	A	T	SNP	DCST1	ENST00000295542	human	ensembl	69_37n	+1	known	nonsense	c.1801	p.K601*	1.000	NULL	pfam_DC_STAMP-like,pfscan_Znf_RING	-	no_errors	DCST1	HGNC	ENSG00000163357	108	0	0.00	157	20	11.24	-	-	-
EGR3	0	genome.wustl.edu	37	8	22548460	22548460	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	8	22548460	22548460	G	-	DEL	EGR3	ENST00000317216	human	ensembl	69_37n	-1	known	frame_shift_del	c.690	p.I231fs	1.000	NULL	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR3	HGNC	ENSG00000179388	77	0	0.00	11	2	15.38	-	-	-
ESYT1	0	genome.wustl.edu	37	12	56532266	56532266	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	12	56532266	56532266	C	T	SNP	ESYT1	ENST00000267113	human	ensembl	69_37n	+1	known	missense	c.2446	p.R816W	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,prints_C2_dom,pfscan_C2_membr_targeting	-	no_errors	ESYT1	HGNC	ENSG00000139641	62	0	0.00	14	5	26.32	-	-	-
GOLGA3	0	genome.wustl.edu	37	12	133393258	133393258	+	Missense_Mutation	SNP	C	C	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	12	133393258	133393258	C	A	SNP	GOLGA3	ENST00000204726	human	ensembl	69_37n	-1	known	missense	c.274	p.D92Y	1.000	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615	101	0	0.00	18	9	33.33	-	-	-
HEATR4	0	genome.wustl.edu	37	14	73989691	73989691	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	14	73989691	73989691	G	A	SNP	HEATR4	ENST00000334988	human	ensembl	69_37n	-1	known	missense	c.166	p.R56C	0.000	NULL	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	HEATR4	HGNC	ENSG00000187105	51	0	0.00	18	5	21.74	-	-	-
HLA-DRB1	0	genome.wustl.edu	37	6	32552060	32552061	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	6	32552060	32552061	-	G	INS	HLA-DRB1	ENST00000360004	human	ensembl	69_37n	-1	known	frame_shift_ins	c.196_195	p.S65fs	0.000:0.881	pfam_MHC_II_b_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DRB1	HGNC	ENSG00000196126	53	0	0.00	9	2	18.18	-	-	-
ID2	0	genome.wustl.edu	37	2	8822549	8822549	+	Missense_Mutation	SNP	T	T	C			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	2	8822549	8822549	T	C	SNP	ID2	ENST00000234091	human	ensembl	69_37n	+1	known	missense	c.254	p.I85T	0.814	superfamily_HLH_DNA-bd	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	ID2	HGNC	ENSG00000115738	36	0	0.00	7	4	36.36	-	-	-
IKBKB	0	genome.wustl.edu	37	8	42151033	42151033	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	8	42151033	42151033	A	-	DEL	IKBKB	ENST00000342222	human	ensembl	69_37n	+1	known	frame_shift_del	c.391	p.K131fs	1.000	smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	IKBKB	HGNC	ENSG00000104365	141	0	0.00	45	18	28.12	-	-	-
IKBKB	0	genome.wustl.edu	37	8	42179428	42179428	+	Missense_Mutation	SNP	G	G	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	8	42179428	42179428	G	T	SNP	IKBKB	ENST00000520810	human	ensembl	69_37n	+1	known	missense	c.1703	p.R568M	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IKKbetaNEMObind,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ubiquitin_supergroup,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	IKBKB	HGNC	ENSG00000104365	258	0	0.00	178	73	29.08	-	-	-
KCNH7	0	genome.wustl.edu	37	2	163256927	163256928	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	2	163256927	163256928	-	T	INS	KCNH7	ENST00000332142	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2179_2178	p.L726fs	1.000:0.978	superfamily_cNMP-bd-like	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_Ion_trans_2,pfam_PAS_fold_3,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,tigrfam_PAS	-	no_errors	KCNH7	HGNC	ENSG00000184611	135	0	0.00	20	3	13.04	-	-	-
KIR2DL4	0	genome.wustl.edu	37	19	55325455	55325455	+	Silent	SNP	G	G	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	19	55325455	55325455	G	A	SNP	KIR2DL4	ENST00000396284	human	ensembl	69_37n	+1	known	silent	c.1083	p.L361	0.001	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL4	HGNC	ENSG00000189013	24	0	0.00	18	4	18.18	-	-	-
LPP	0	genome.wustl.edu	37	3	188584034	188584034	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	3	188584034	188584034	G	A	SNP	LPP	ENST00000312675	human	ensembl	69_37n	+1	known	missense	c.1457	p.R486Q	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LPP	HGNC	ENSG00000145012	156	0	0.00	24	11	31.43	-	-	-
MUC20	0	genome.wustl.edu	37	3	195452668	195452668	+	Silent	SNP	C	C	G			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	3	195452668	195452668	C	G	SNP	MUC20	ENST00000447234	human	ensembl	69_37n	+1	known	silent	c.1194	p.P398	0.004	NULL	NULL	-	no_errors	MUC20	HGNC	ENSG00000176945	50	0	0.00	12	6	33.33	-	-	-
ODZ4	0	genome.wustl.edu	37	11	78780799	78780799	+	Missense_Mutation	SNP	A	A	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	11	78780799	78780799	A	T	SNP	ODZ4	ENST00000278550	human	ensembl	69_37n	-1	known	missense	c.191	p.V64E	1.000	pfam_Ten_N	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ4	HGNC	ENSG00000149256	55	0	0.00	50	7	12.28	-	-	-
PGAM1P5	0	genome.wustl.edu	37	12	96066487	96066487	+	RNA	SNP	C	C	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	12	96066487	96066487	C	T	SNP	PGAM1P5	ENST00000552554	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PGAM1P5	HGNC	ENSG00000257150	37	0	0.00	21	11	34.38	-	-	-
PIPSL	0	genome.wustl.edu	37	10	95720549	95720549	+	RNA	SNP	T	T	C			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	10	95720549	95720549	T	C	SNP	PIPSL	ENST00000480546	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	PIPSL	HGNC	ENSG00000180764	89	0	0.00	46	19	29.23	-	-	-
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037868	10037868	+	RNA	SNP	G	G	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	Y	10037868	10037868	G	A	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705	45	0	0.00	21	5	18.52	-	-	-
RRP12	0	genome.wustl.edu	37	10	99130258	99130258	+	Silent	SNP	G	G	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	10	99130258	99130258	G	A	SNP	RRP12	ENST00000370992	human	ensembl	69_37n	-1	known	silent	c.2643	p.L881	1.000	superfamily_ARM-type_fold	pfam_Uncharacterised_NUC173,superfamily_ARM-type_fold	-	no_errors	RRP12	HGNC	ENSG00000052749	65	0	0.00	23	9	28.12	-	-	-
SEZ6L2	0	genome.wustl.edu	37	16	29888138	29888138	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	16	29888138	29888138	G	-	DEL	SEZ6L2	ENST00000308713	human	ensembl	69_37n	-1	known	frame_shift_del	c.2043	p.D682fs	0.610	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_CUB,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L2	HGNC	ENSG00000174938	20	0	0.00	1	2	66.67	-	-	-
SMARCA1	0	genome.wustl.edu	37	X	128614761	128614761	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	X	128614761	128614761	G	-	DEL	SMARCA1	ENST00000371122	human	ensembl	69_37n	-1	known	frame_shift_del	c.2359	p.Q787fs	1.000	pfam_ATPase_nucl-remodel_HAND-dom,superfamily_ATPase_nucl-remodel_HAND-dom	pfam_SNF2_N,pfam_SLIDE,pfam_ATPase_nucl-remodel_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_Homeodomain-like,superfamily_ATPase_nucl-remodel_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038	106	0	0.00	60	79	55.63	-	-	-
STEAP2	0	genome.wustl.edu	37	7	89854877	89854879	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	7	89854877	89854879	GCC	-	DEL	STEAP2	ENST00000287908	human	ensembl	69_37n	+1	known	in_frame_del	c.481_483	p.A161in_frame_del	1.000:1.000:1.000	NULL	pfam_Fe3_Rdtase_TM_dom,pfam_NADP_OxRdtase_F420	-	no_errors	STEAP2	HGNC	ENSG00000157214	39	0	0.00	13	3	17.65	-	-	-
TBC1D8	0	genome.wustl.edu	37	2	101648789	101648789	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	2	101648789	101648789	C	T	SNP	TBC1D8	ENST00000409318	human	ensembl	69_37n	-1	known	nonsense	c.1877	p.W626*	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8	HGNC	ENSG00000204634	100	0	0.00	23	4	14.81	-	-	-
TCTE1	0	genome.wustl.edu	37	6	44250253	44250253	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	6	44250253	44250253	C	T	SNP	TCTE1	ENST00000371505	human	ensembl	69_37n	-1	known	missense	c.890	p.R297H	0.997	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	TCTE1	HGNC	ENSG00000146221	111	0	0.00	22	8	26.67	-	-	-
TSNARE1	0	genome.wustl.edu	37	8	143436021	143436021	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	8	143436021	143436021	G	A	SNP	TSNARE1	ENST00000307180	human	ensembl	69_37n	-1	known	missense	c.65	p.S22L	0.030	NULL	pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	TSNARE1	HGNC	ENSG00000171045	36	0	0.00	11	6	35.29	-	-	-
ZAN	0	genome.wustl.edu	37	7	100349612	100349612	+	Silent	SNP	C	C	T			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	7	100349612	100349612	C	T	SNP	ZAN	ENST00000546292	human	ensembl	69_37n	+1	known	silent	c.1884	p.I628	0.000	NULL	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	887	0	0.00	540	259	32.42	-	-	-
ZNF229	0	genome.wustl.edu	37	19	44936532	44936532	+	Missense_Mutation	SNP	T	T	G			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	19	44936532	44936532	T	G	SNP	ZNF229	ENST00000588931	human	ensembl	69_37n	-1	known	missense	c.103	p.S35R	0.640	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF229	HGNC	ENSG00000167383	161	0	0.00	54	24	30.77	-	-	-
ZNF804B	0	genome.wustl.edu	37	7	88963520	88963521	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A1-A0SM-01A-11D-A099-09	TCGA-A1-A0SM-10A-02D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2057b341-ff5c-45ef-83bb-005e29b2e740	e9a6364d-c86f-4656-9089-d0a59a87bd73	7	88963520	88963521	-	A	INS	ZNF804B	ENST00000333190	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1224_1225	p.N408fs	0.001:0.001	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	65	0	0.00	14	2	12.50	-	-	-
