Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACLY	0	genome.wustl.edu	37	17	40054937	40054937	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	17	40054937	40054937	G	T	SNP	ACLY	ENST00000352035	human	ensembl	69_37n	-1	known	missense	c.1285	p.P429T	1.000	pirsf_ATP-citrate_synthase	pfam_Citrate_synthase-like,pfam_CoA_ligase,pfam_CoA-bd,pfam_ATP-grasp_succ-CoA_synth-type,superfamily_Citrate_synthase-like_core,superfamily_Succinyl-CoA_synth-like,smart_CoA-bd,pirsf_ATP-citrate_synthase	-	no_errors	ACLY	HGNC	ENSG00000131473	75	0	0.00	78	45	36.59	-	-	-
ARID1A	0	genome.wustl.edu	37	1	27057874	27057874	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	1	27057874	27057874	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	69_37n	+1	known	nonsense	c.1582	p.Q528*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	90	0	0.00	48	44	47.83	-	-	-
C12orf74	0	genome.wustl.edu	37	12	93100574	93100574	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	12	93100574	93100574	C	-	DEL	C12orf74	ENST00000397833	human	ensembl	69_37n	+1	known	frame_shift_del	c.167	p.R57fs	0.224	NULL	NULL	-	no_errors	C12orf74	HGNC	ENSG00000214215	25	0	0.00	33	30	47.62	-	-	-
C1orf170	0	genome.wustl.edu	37	1	914764	914765	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	1	914764	914765	-	G	INS	C1orf170	ENST00000433179	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1364_1363	p.R455fs	0.032:0.262	NULL	NULL	-	no_errors	C1orf170	HGNC	ENSG00000187642	21	0	0.00	24	10	29.41	-	-	-
C2CD3	0	genome.wustl.edu	37	11	73785550	73785550	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	11	73785550	73785550	G	A	SNP	C2CD3	ENST00000334126	human	ensembl	69_37n	-1	known	missense	c.4699	p.P1567S	0.171	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	-	no_errors	C2CD3	HGNC	ENSG00000168014	67	0	0.00	1423	181	11.28	-	-	-
CABIN1	0	genome.wustl.edu	37	22	24432554	24432554	+	Missense_Mutation	SNP	A	A	C			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	22	24432554	24432554	A	C	SNP	CABIN1	ENST00000263119	human	ensembl	69_37n	+1	known	missense	c.21	p.L7F	1.000	NULL	pfam_MEF2_binding,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CABIN1	HGNC	ENSG00000099991	62	0	0.00	66	55	45.45	-	-	-
CDH1	0	genome.wustl.edu	37	16	68855995	68855996	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	16	68855995	68855996	-	T	INS	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1803_1804	p.C602fs	0.000:0.327	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	61	0	0.00	30	34	53.12	-	-	-
CEP152	0	genome.wustl.edu	37	15	49048645	49048645	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	15	49048645	49048645	G	A	SNP	CEP152	ENST00000380950	human	ensembl	69_37n	-1	known	missense	c.2800	p.L934F	0.999	NULL	NULL	-	no_errors	CEP152	HGNC	ENSG00000103995	41	0	0.00	26	19	42.22	-	-	-
CNTNAP3	0	genome.wustl.edu	37	9	39178266	39178266	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	9	39178266	39178266	C	G	SNP	CNTNAP3	ENST00000297668	human	ensembl	69_37n	-1	known	missense	c.630	p.L210F	1.000	superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EGF-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3	HGNC	ENSG00000106714	114	0	0.00	90	33	26.83	-	-	-
CNTRL	0	genome.wustl.edu	37	9	123929866	123929866	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	9	123929866	123929866	C	T	SNP	CNTRL	ENST00000238341	human	ensembl	69_37n	+1	known	nonsense	c.5755	p.Q1919*	0.998	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNTRL	HGNC	ENSG00000119397	41	0	0.00	43	18	29.51	-	-	-
DDN	0	genome.wustl.edu	37	12	49390678	49390678	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	12	49390678	49390678	C	T	SNP	DDN	ENST00000421952	human	ensembl	69_37n	-1	known	missense	c.1981	p.E661K	0.000	NULL	NULL	-	no_errors	DDN	HGNC	ENSG00000181418	42	0	0.00	52	31	37.35	-	-	-
FAT4	0	genome.wustl.edu	37	4	126237986	126237986	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	4	126237986	126237986	C	G	SNP	FAT4	ENST00000394329	human	ensembl	69_37n	+1	known	missense	c.420	p.I140M	0.995	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	29	0	0.00	43	31	41.89	-	-	-
FBXO16	0	genome.wustl.edu	37	8	28286174	28286174	+	Missense_Mutation	SNP	T	T	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	8	28286174	28286174	T	G	SNP	FBXO16	ENST00000346498	human	ensembl	69_37n	-1	novel	missense	c.887	p.D296A	0.004	NULL	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO16	HGNC	ENSG00000214050	26	0	0.00	28	4	12.50	-	-	-
GLI4	0	genome.wustl.edu	37	8	144358399	144358399	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	8	144358399	144358399	G	A	SNP	GLI4	ENST00000340042	human	ensembl	69_37n	+1	known	missense	c.556	p.E186K	0.075	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI4	HGNC	ENSG00000250571	47	0	0.00	23	17	42.50	-	-	-
GOLGA6L10	0	genome.wustl.edu	37	15	82635510	82635510	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	15	82635510	82635510	C	A	SNP	GOLGA6L10	ENST00000439287	human	ensembl	69_37n	-1	known	missense	c.1270	p.V424F	0.879	NULL	NULL	-	no_errors	GOLGA6L10	HGNC	ENSG00000205281	12	0	0.00	4	3	42.86	-	-	-
GTF2IRD2P1	0	genome.wustl.edu	37	7	72657797	72657797	+	RNA	SNP	C	C	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	7	72657797	72657797	C	T	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.908	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	92	0	0.00	131	19	12.67	-	-	-
HBBP1	0	genome.wustl.edu	37	11	5263362	5263362	+	RNA	SNP	T	T	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	11	5263362	5263362	T	G	SNP	HBBP1	ENST00000454892	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.906	-	-	-	no_errors	HBBP1	HGNC	ENSG00000229988	38	0	0.00	24	17	41.46	-	-	-
HILS1	0	genome.wustl.edu	37	17	48258285	48258285	+	RNA	SNP	A	A	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	17	48258285	48258285	A	G	SNP	HILS1	ENST00000504307	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HILS1	HGNC	ENSG00000188662	33	0	0.00	48	6	11.11	-	-	-
IFT27	0	genome.wustl.edu	37	22	37172131	37172131	+	RNA	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	22	37172131	37172131	G	A	SNP	IFT27	ENST00000476548	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IFT27	HGNC	ENSG00000100360	34	0	0.00	28	4	12.50	-	-	-
JMJD1C	0	genome.wustl.edu	37	10	64974188	64974188	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	10	64974188	64974188	G	C	SNP	JMJD1C	ENST00000399262	human	ensembl	69_37n	-1	known	missense	c.1739	p.T580R	0.556	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988	25	0	0.00	19	29	60.42	-	-	-
KCNT2	0	genome.wustl.edu	37	1	196342320	196342320	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	1	196342320	196342320	G	C	SNP	KCNT2	ENST00000294725	human	ensembl	69_37n	-1	known	missense	c.1353	p.C451W	1.000	pfam_K_chnl_Ca-activ_BK_asu	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_2	-	no_errors	KCNT2	HGNC	ENSG00000162687	21	0	0.00	34	18	34.62	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56177802	56177802	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	5	56177802	56177802	G	-	DEL	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_del	c.2775	p.D926fs	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	35	0	0.00	8	11	57.89	-	-	-
MFAP4	0	genome.wustl.edu	37	17	19290122	19290123	+	In_Frame_Ins	INS	-	-	AGC			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	17	19290122	19290123	-	AGC	INS	MFAP4	ENST00000395592	human	ensembl	69_37n	-1	known	in_frame_ins	c.108_107	p.38in_frame_insL	0.022:0.253	NULL	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	-	no_errors	MFAP4	HGNC	ENSG00000166482	14	0	0.00	3	21	87.50	-	-	-
MFGE8	0	genome.wustl.edu	37	15	89444793	89444793	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	15	89444793	89444793	G	A	SNP	MFGE8	ENST00000268150	human	ensembl	69_37n	-1	known	nonsense	c.859	p.Q287*	0.973	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EGF-like_dom,superfamily_Galactose-bd-like,smart_EGF-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	MFGE8	HGNC	ENSG00000140545	57	0	0.00	50	36	41.86	-	-	-
ODF2	0	genome.wustl.edu	37	9	131223278	131223278	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	9	131223278	131223278	G	A	SNP	ODF2	ENST00000372796	human	ensembl	69_37n	+1	known	missense	c.181	p.V61M	1.000	NULL	NULL	-	no_errors	ODF2	HGNC	ENSG00000136811	35	0	0.00	24	13	35.14	-	-	-
OR2L2	0	genome.wustl.edu	37	1	248201808	248201808	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	1	248201808	248201808	T	C	SNP	OR2L2	ENST00000366479	human	ensembl	69_37n	+1	known	missense	c.239	p.M80T	0.004	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2L2	HGNC	ENSG00000203663	177	0	0.00	202	83	29.12	-	-	-
PCDHA13	0	genome.wustl.edu	37	5	140263790	140263790	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	5	140263790	140263790	G	A	SNP	PCDHA13	ENST00000289272	human	ensembl	69_37n	+1	known	missense	c.1937	p.R646H	0.025	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	83	0	0.00	46	86	64.66	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178948136	178948136	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	3	178948136	178948136	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.2908	p.E970K	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	30	0	0.00	26	12	31.58	-	-	-
PINK1	0	genome.wustl.edu	37	1	20977380	20977380	+	RNA	SNP	T	T	C			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	1	20977380	20977380	T	C	SNP	PINK1	ENST00000400490	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	PINK1	HGNC	ENSG00000158828	10	0	0.00	13	7	35.00	-	-	-
PRDM16	0	genome.wustl.edu	37	1	3328444	3328444	+	Silent	SNP	C	C	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	1	3328444	3328444	C	T	SNP	PRDM16	ENST00000270722	human	ensembl	69_37n	+1	known	silent	c.1683	p.A561	0.000	NULL	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	45	0	0.00	70	14	16.67	-	-	-
RBL2	0	genome.wustl.edu	37	16	53524699	53524699	+	RNA	SNP	C	C	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	16	53524699	53524699	C	G	SNP	RBL2	ENST00000379935	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RBL2	HGNC	ENSG00000103479	32	0	0.00	14	21	60.00	-	-	-
SERTAD3	0	genome.wustl.edu	37	19	40947664	40947664	+	Silent	SNP	C	C	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	19	40947664	40947664	C	T	SNP	SERTAD3	ENST00000322354	human	ensembl	69_37n	-1	known	silent	c.324	p.G108	0.227	NULL	pfam_SERTA,pfscan_SERTA	-	no_errors	SERTAD3	HGNC	ENSG00000167565	37	0	0.00	34	25	42.37	-	-	-
SIK3	0	genome.wustl.edu	37	11	116827720	116827720	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	11	116827720	116827720	G	A	SNP	SIK3	ENST00000375300	human	ensembl	69_37n	-1	known	missense	c.334	p.R112W	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_cat_dom	-	no_errors	SIK3	HGNC	ENSG00000160584	39	0	0.00	11	6	35.29	-	-	-
SLC22A1	0	genome.wustl.edu	37	6	160577016	160577016	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	6	160577016	160577016	G	T	SNP	SLC22A1	ENST00000366963	human	ensembl	69_37n	+1	known	missense	c.1508	p.G503V	0.795	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A1	HGNC	ENSG00000175003	82	0	0.00	64	18	21.69	-	-	-
SNORA72	0	genome.wustl.edu	37	8	99054661	99054661	+	RNA	SNP	C	C	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	8	99054661	99054661	C	A	SNP	SNORA72	ENST00000501016	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970	9	0	0.00	2	4	66.67	-	-	-
SNX25	0	genome.wustl.edu	37	4	186284580	186284580	+	Silent	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	4	186284580	186284580	G	A	SNP	SNX25	ENST00000264694	human	ensembl	69_37n	+1	known	silent	c.2484	p.L828	0.962	NULL	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_Regulat_G_prot_signal,pfam_Phox,superfamily_Regulat_G_prot_signal_superfam,superfamily_Phox,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal	-	no_errors	SNX25	HGNC	ENSG00000109762	45	0	0.00	40	29	42.03	-	-	-
SPEG	0	genome.wustl.edu	37	2	220312892	220312892	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	2	220312892	220312892	C	G	SNP	SPEG	ENST00000312358	human	ensembl	69_37n	+1	novel	missense	c.1012	p.R338G	0.203	NULL	pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	SPEG	HGNC	ENSG00000072195	32	0	0.00	30	10	25.00	-	-	-
SYNDIG1	0	genome.wustl.edu	37	20	24524112	24524112	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	20	24524112	24524112	G	A	SNP	SYNDIG1	ENST00000376862	human	ensembl	69_37n	+1	known	missense	c.379	p.E127K	1.000	NULL	pfam_Interferon-induced_TM_protein	-	no_errors	SYNDIG1	HGNC	ENSG00000101463	58	0	0.00	32	28	46.67	-	-	-
TMPRSS7	0	genome.wustl.edu	37	3	111757148	111757148	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	3	111757148	111757148	C	G	SNP	TMPRSS7	ENST00000452346	human	ensembl	69_37n	+1	novel	missense	c.278	p.T93R	0.993	NULL	pfam_Peptidase_S1_S6,pfam_SEA,pfam_LDrepeatLR_classA_rpt,pfam_CUB,superfamily_Pept_cys/ser_Trypsin-like,superfamily_CUB,superfamily_LDrepeatLR_classA_rpt,smart_CUB,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_CUB,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1_S6	-	no_errors	TMPRSS7	HGNC	ENSG00000176040	27	0	0.00	21	6	22.22	-	-	-
TRPM1	0	genome.wustl.edu	37	15	31332453	31332453	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	15	31332453	31332453	C	A	SNP	TRPM1	ENST00000542188	human	ensembl	69_37n	-1	known	missense	c.2235	p.W745C	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160	64	0	0.00	60	15	20.00	-	-	-
TRPV5	0	genome.wustl.edu	37	7	142626581	142626581	+	Silent	SNP	G	G	C			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	7	142626581	142626581	G	C	SNP	TRPV5	ENST00000265310	human	ensembl	69_37n	-1	known	silent	c.429	p.V143	0.997	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6_channel,prints_TRPV5_channel,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV5	HGNC	ENSG00000127412	38	0	0.00	39	21	35.00	-	-	-
TYRO3	0	genome.wustl.edu	37	15	41865525	41865525	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	15	41865525	41865525	G	T	SNP	TYRO3	ENST00000263798	human	ensembl	69_37n	+1	known	missense	c.2005	p.V669L	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TYRO3	HGNC	ENSG00000092445	35	0	0.00	59	8	11.94	-	-	-
UVRAG	0	genome.wustl.edu	37	11	75623074	75623074	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SB-01A-21D-A25Q-09	TCGA-A7-A4SB-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ec022e6-a735-448d-86b4-2854b80669f6	7888d0dc-9a75-417a-8dd6-3897de85f24b	11	75623074	75623074	C	T	SNP	UVRAG	ENST00000356136	human	ensembl	69_37n	+1	known	missense	c.584	p.S195F	1.000	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	-	no_errors	UVRAG	HGNC	ENSG00000198382	42	0	0.00	19	485	96.23	-	-	-
