Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AMPD1	0	genome.wustl.edu	37	1	115220952	115220952	+	Splice_Site	SNP	A	A	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	1	115220952	115220952	A	G	SNP	AMPD1	ENST00000520113	human	ensembl	69_37n	-1	known	splice_site	c.1191+2	e8+2	1.000	-	-	-	no_errors	AMPD1	HGNC	ENSG00000116748	317	0	0	92	50	35.21	-	-	-
ANKRD12	0	genome.wustl.edu	37	18	9195691	9195691	+	Missense_Mutation	SNP	A	A	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	18	9195691	9195691	A	G	SNP	ANKRD12	ENST00000262126	human	ensembl	69_37n	+1	known	missense	c.230	p.D77G	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD12	HGNC	ENSG00000101745	186	0	0.00	26	14	35.00	-	-	-
ATP11A	0	genome.wustl.edu	37	13	113439503	113439503	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	13	113439503	113439503	G	T	SNP	ATP11A	ENST00000375630	human	ensembl	69_37n	+1	known	nonsense	c.94	p.E32*	1.000	NULL	pfam_ATPase_P-typ_ATPase-assoc-dom,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP11A	HGNC	ENSG00000068650	71	0	0.00	25	20	44.44	-	-	-
C1orf173	0	genome.wustl.edu	37	1	75055760	75055761	+	Frame_Shift_Ins	INS	-	-	AA			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	1	75055760	75055761	-	AA	INS	C1orf173	ENST00000326665	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1731_1730	p.M577fs	0.048:0.017	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965	81	0	0.00	19	3	13.64	-	-	-
C9orf171	0	genome.wustl.edu	37	9	135374976	135374976	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	9	135374976	135374976	G	A	SNP	C9orf171	ENST00000343036	human	ensembl	69_37n	+1	known	silent	c.621	p.G207	0.983	NULL	NULL	-	no_errors	C9orf171	HGNC	ENSG00000188523	26	0	0.00	29	19	39.58	-	-	-
CA4	0	genome.wustl.edu	37	17	58234014	58234014	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	17	58234014	58234014	G	A	SNP	CA4	ENST00000300900	human	ensembl	69_37n	+1	known	missense	c.206	p.R69H	0.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA4	HGNC	ENSG00000167434	84	0	0.00	100	20	16.67	-	-	-
CDS2	0	genome.wustl.edu	37	20	5157348	5157348	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	20	5157348	5157348	G	A	SNP	CDS2	ENST00000460006	human	ensembl	69_37n	+1	known	missense	c.346	p.V116I	1.000	pfam_PC_trans,pirsf_PC_Trfase_euk	pfam_PC_trans,pirsf_PC_Trfase_euk	-	no_errors	CDS2	HGNC	ENSG00000101290	252	0	0.00	190	95	33.33	-	-	-
CEP290	0	genome.wustl.edu	37	12	88442981	88442981	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	12	88442981	88442981	C	T	SNP	CEP290	ENST00000309041	human	ensembl	69_37n	-1	known	missense	c.7426	p.V2476I	0.001	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707	230	0	0.00	30	15	33.33	-	-	-
CFHR5	0	genome.wustl.edu	37	1	196967316	196967316	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	1	196967316	196967316	G	A	SNP	CFHR5	ENST00000367414	human	ensembl	69_37n	+1	known	silent	c.1101	p.K367	0.000	superfamily_Complement_control_module,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR5	HGNC	ENSG00000134389	204	0	0.00	97	16	14.16	-	-	-
CLDN6	0	genome.wustl.edu	37	16	3065517	3065517	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	16	3065517	3065517	G	A	SNP	CLDN6	ENST00000328796	human	ensembl	69_37n	-1	known	missense	c.506	p.A169V	0.994	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin6	-	no_errors	CLDN6	HGNC	ENSG00000184697	11	0	0.00	14	6	30.00	-	-	-
CNGA1	0	genome.wustl.edu	37	4	47938686	47938686	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	4	47938686	47938686	G	A	SNP	CNGA1	ENST00000402813	human	ensembl	69_37n	-1	known	silent	c.2032	p.L678	0.246	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA1	HGNC	ENSG00000198515	110	0	0.00	31	14	31.11	-	-	-
COL19A1	0	genome.wustl.edu	37	6	70840095	70840095	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	6	70840095	70840095	G	T	SNP	COL19A1	ENST00000322773	human	ensembl	69_37n	+1	known	nonsense	c.1363	p.G455*	0.000	NULL	pfam_Collagen,superfamily_ConA-like_lec_gl,smart_Laminin_G	-	no_errors	COL19A1	HGNC	ENSG00000082293	301	2	0.66	191	66	25.68	-	-	-
COL22A1	0	genome.wustl.edu	37	8	139697498	139697498	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	8	139697498	139697498	C	T	SNP	COL22A1	ENST00000303045	human	ensembl	69_37n	-1	known	missense	c.2920	p.A974T	0.002	pfam_Collagen	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436	47	0	0.00	32	23	41.82	-	-	-
CSMD1	0	genome.wustl.edu	37	8	3015484	3015484	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	8	3015484	3015484	C	T	SNP	CSMD1	ENST00000520002	human	ensembl	69_37n	-1	known	missense	c.5852	p.R1951H	0.863	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	61	0	0.00	32	16	33.33	-	-	-
DGKD	0	genome.wustl.edu	37	2	234357797	234357797	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	2	234357797	234357797	G	A	SNP	DGKD	ENST00000264057	human	ensembl	69_37n	+1	known	missense	c.1663	p.D555N	0.990	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,pfam_Pleckstrin_homology,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKD	HGNC	ENSG00000077044	97	0	0.00	66	21	24.14	-	-	-
DGKG	0	genome.wustl.edu	37	3	185969589	185969589	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	3	185969589	185969589	C	T	SNP	DGKG	ENST00000265022	human	ensembl	69_37n	-1	known	missense	c.1720	p.V574I	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKG	HGNC	ENSG00000058866	137	0	0.00	57	113	66.08	-	-	-
EIF2C2	0	genome.wustl.edu	37	8	141549439	141549439	+	Missense_Mutation	SNP	A	A	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	8	141549439	141549439	A	T	SNP	EIF2C2	ENST00000220592	human	ensembl	69_37n	-1	known	missense	c.2149	p.C717S	1.000	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	EIF2C2	HGNC	ENSG00000123908	48	0	0.00	54	20	27.03	-	-	-
EPS8	0	genome.wustl.edu	37	12	15800121	15800121	+	Missense_Mutation	SNP	T	T	C			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	12	15800121	15800121	T	C	SNP	EPS8	ENST00000281172	human	ensembl	69_37n	-1	known	missense	c.1508	p.H503R	0.039	NULL	pfam_PTB,pfam_SH3_domain,pfam_PTyr_interaction_dom,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTyr_interaction_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8	HGNC	ENSG00000151491	131	0	0.00	69	19	21.35	-	-	-
F7	0	genome.wustl.edu	37	13	113771834	113771834	+	Silent	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	13	113771834	113771834	C	T	SNP	F7	ENST00000375581	human	ensembl	69_37n	+1	known	silent	c.729	p.I243	0.000	pirsf_Pept_S1A_FX,pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6	pirsf_Pept_S1A_FX,pfam_Peptidase_S1_S6,pfam_GLA_domain,pfam_Peptidase_S1A_nudel,pfam_EGF-like_dom,superfamily_Pept_cys/ser_Trypsin-like,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd,smart_EGF-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,prints_GLA_domain,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1_S6	-	no_errors	F7	HGNC	ENSG00000057593	102	0	0.00	58	22	27.50	-	-	-
FLRT2	0	genome.wustl.edu	37	14	86089263	86089263	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	14	86089263	86089263	C	T	SNP	FLRT2	ENST00000330753	human	ensembl	69_37n	+1	known	missense	c.1405	p.R469C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070	66	0	0.00	27	17	38.64	-	-	-
GPR17	0	genome.wustl.edu	37	2	128409054	128409054	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	2	128409054	128409054	G	A	SNP	GPR17	ENST00000272644	human	ensembl	69_37n	+1	known	missense	c.829	p.V277M	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor,prints_Protea_act_rcpt	-	no_errors	GPR17	HGNC	ENSG00000144230	20	0	0.00	18	10	35.71	-	-	-
GPR64	0	genome.wustl.edu	37	X	19017274	19017274	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	X	19017274	19017274	C	A	SNP	GPR64	ENST00000379869	human	ensembl	69_37n	-1	known	missense	c.2454	p.K818N	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR64	HGNC	ENSG00000173698	239	0	0.00	116	66	36.07	-	-	-
IPPK	0	genome.wustl.edu	37	9	95378177	95378177	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	9	95378177	95378177	G	A	SNP	IPPK	ENST00000287996	human	ensembl	69_37n	-1	known	silent	c.1413	p.N471	0.000	NULL	pfam_Ins_P5_2-kin	-	no_errors	IPPK	HGNC	ENSG00000127080	208	0	0.00	184	43	18.94	-	-	-
IQSEC1	0	genome.wustl.edu	37	3	12977013	12977013	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	3	12977013	12977013	C	A	SNP	IQSEC1	ENST00000450726	human	ensembl	69_37n	-1	known	missense	c.1546	p.A516S	0.511	NULL	pfam_Sec7,superfamily_Sec7,smart_Sec7,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	IQSEC1	HGNC	ENSG00000144711	58	0	0.00	19	45	62.50	-	-	-
ITGAD	0	genome.wustl.edu	37	16	31424209	31424209	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	16	31424209	31424209	G	A	SNP	ITGAD	ENST00000389202	human	ensembl	69_37n	+1	known	silent	c.1758	p.A586	0.094	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886	53	0	0.00	23	18	43.90	-	-	-
KCNB1	0	genome.wustl.edu	37	20	47989776	47989776	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	20	47989776	47989776	G	A	SNP	KCNB1	ENST00000371741	human	ensembl	69_37n	-1	known	missense	c.2321	p.P774L	1.000	NULL	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445	184	0	0.00	175	55	23.91	-	-	-
KCNH4	0	genome.wustl.edu	37	17	40322182	40322182	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	17	40322182	40322182	C	T	SNP	KCNH4	ENST00000264661	human	ensembl	69_37n	-1	known	missense	c.1333	p.V445M	1.000	pfam_Ion_trans_dom,pfam_Ion_trans_2	pfam_Ion_trans_dom,pfam_Ion_trans_2,pfam_PAS_fold_3,pfam_PAS_fold,pfam_PAS_4,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,tigrfam_PAS	-	no_errors	KCNH4	HGNC	ENSG00000089558	11	0	0.00	9	11	55.00	-	-	-
KRTAP20-3	0	genome.wustl.edu	37	21	32015215	32015215	+	Missense_Mutation	SNP	A	A	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	21	32015215	32015215	A	G	SNP	KRTAP20-3	ENST00000382826	human	ensembl	69_37n	+1	novel	missense	c.8	p.Y3C	0.000	pfam_KRTAP	pfam_KRTAP	-	no_errors	KRTAP20-3	HGNC	ENSG00000206104	270	0	0.00	108	34	23.94	-	-	-
MAEL	0	genome.wustl.edu	37	1	166990949	166990949	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	1	166990949	166990949	G	A	SNP	MAEL	ENST00000367872	human	ensembl	69_37n	+1	known	missense	c.1162	p.V388I	1.000	NULL	pfam_HMG_superfamily,superfamily_HMG_superfamily,superfamily_CH-domain	-	no_errors	MAEL	HGNC	ENSG00000143194	240	0	0.00	37	15	28.85	-	-	-
MAGEC2	0	genome.wustl.edu	37	X	141290906	141290906	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	X	141290906	141290906	G	C	SNP	MAGEC2	ENST00000247452	human	ensembl	69_37n	-1	known	missense	c.868	p.P290A	0.004	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEC2	HGNC	ENSG00000046774	96	0	0.00	52	37	41.57	-	-	-
MAP1LC3C	0	genome.wustl.edu	37	1	242159611	242159611	+	Missense_Mutation	SNP	T	T	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	1	242159611	242159611	T	A	SNP	MAP1LC3C	ENST00000357246	human	ensembl	69_37n	-1	known	missense	c.298	p.T100S	1.000	pfam_Atg8_ubiquitin-like,pfam_Autophagy-rel_prot_12	pfam_Atg8_ubiquitin-like,pfam_Autophagy-rel_prot_12	-	no_errors	MAP1LC3C	HGNC	ENSG00000197769	113	0	0.00	136	36	20.93	-	-	-
MRPL15	0	genome.wustl.edu	37	8	55060178	55060178	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	8	55060178	55060178	C	G	SNP	MRPL15	ENST00000260102	human	ensembl	69_37n	+1	known	missense	c.790	p.Q264E	1.000	NULL	pfam_Ribosomal_L18e/L15P,superfamily_Ribosomal_L18e/L15P	-	no_errors	MRPL15	HGNC	ENSG00000137547	203	0	0.00	149	37	19.89	-	-	-
NAT10	0	genome.wustl.edu	37	11	34160944	34160944	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	11	34160944	34160944	G	T	SNP	NAT10	ENST00000257829	human	ensembl	69_37n	+1	known	missense	c.2321	p.R774L	1.000	NULL	pfam_Helicase_dom,pfam_DUF1726,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAT10	HGNC	ENSG00000135372	89	0	0.00	39	50	56.18	-	-	-
NIN	0	genome.wustl.edu	37	14	51237255	51237255	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	14	51237255	51237255	G	A	SNP	NIN	ENST00000245441	human	ensembl	69_37n	-1	known	nonsense	c.1285	p.R429*	0.934	NULL	superfamily_tRNA-bd_arm,pfscan_EF_HAND_2	-	no_errors	NIN	HGNC	ENSG00000100503	299	0	0.00	231	54	18.88	-	-	-
NLRP9	0	genome.wustl.edu	37	19	56243838	56243838	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	19	56243838	56243838	G	A	SNP	NLRP9	ENST00000332836	human	ensembl	69_37n	-1	known	silent	c.1359	p.A453	0.808	NULL	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792	67	0	0.00	38	20	34.48	-	-	-
NPR2	0	genome.wustl.edu	37	9	35792632	35792632	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	9	35792632	35792632	C	G	SNP	NPR2	ENST00000342694	human	ensembl	69_37n	+1	known	missense	c.227	p.S76C	1.000	pfam_ANF_lig-bd_rcpt	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	NPR2	HGNC	ENSG00000159899	11	0	0.00	12	6	33.33	-	-	-
NRXN3	0	genome.wustl.edu	37	14	80328161	80328161	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	14	80328161	80328161	G	A	SNP	NRXN3	ENST00000335750	human	ensembl	69_37n	+1	known	missense	c.3040	p.D1014N	1.000	smart_Neurexin-like	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	45	0	0.00	22	13	37.14	-	-	-
OGG1	0	genome.wustl.edu	37	3	9792081	9792081	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	3	9792081	9792081	G	C	SNP	OGG1	ENST00000429146	human	ensembl	69_37n	+1	known	missense	c.43	p.G15R	1.000	pfam_OGG_N	pfam_OGG_N,pfam_HhH-GPD_domain,superfamily_DNA_glycosylase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	OGG1	HGNC	ENSG00000114026	32	0	0.00	34	9	20.93	-	-	-
OTX2	0	genome.wustl.edu	37	14	57269058	57269058	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	14	57269058	57269058	G	A	SNP	OTX2	ENST00000339475	human	ensembl	69_37n	-1	known	nonsense	c.289	p.R97*	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	pfam_Otx_TF_C,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Otx2_TF,prints_Otx_TF,pfscan_Homeodomain	-	no_errors	OTX2	HGNC	ENSG00000165588	128	0	0.00	59	52	46.85	-	-	-
OXR1	0	genome.wustl.edu	37	8	107696538	107696538	+	Missense_Mutation	SNP	T	T	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	8	107696538	107696538	T	G	SNP	OXR1	ENST00000442977	human	ensembl	69_37n	+1	known	missense	c.479	p.V160G	0.998	NULL	pfam_TLDc,pfam_Peptidoglycan-bd_lysin,pfam_GRAM,smart_Peptidoglycan-bd_Lysin_subgr,smart_TLDc	-	no_errors	OXR1	HGNC	ENSG00000164830	642	0	0.00	431	116	21.21	-	-	-
PCDHA7	0	genome.wustl.edu	37	5	140215374	140215374	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	5	140215374	140215374	C	T	SNP	PCDHA7	ENST00000525929	human	ensembl	69_37n	+1	known	missense	c.1406	p.P469L	0.220	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963	14	0	0.00	9	10	52.63	-	-	-
PCDHGA5	0	genome.wustl.edu	37	5	140745927	140745927	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	5	140745927	140745927	G	A	SNP	PCDHGA5	ENST00000518069	human	ensembl	69_37n	+1	known	missense	c.2030	p.S677N	0.115	pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA5	HGNC	ENSG00000253485	19	0	0.00	16	8	33.33	-	-	-
PGAP2	0	genome.wustl.edu	37	11	3845298	3845298	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	11	3845298	3845298	C	T	SNP	PGAP2	ENST00000396993	human	ensembl	69_37n	+1	known	missense	c.211	p.R71W	0.002	NULL	NULL	-	no_errors	PGAP2	HGNC	ENSG00000148985	71	0	0.00	34	13	27.66	-	-	-
PIEZO2	0	genome.wustl.edu	37	18	10773432	10773432	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	18	10773432	10773432	G	A	SNP	PIEZO2	ENST00000582913	human	ensembl	69_37n	-1	known	silent	c.2730	p.S910	0.202	NULL	NULL	-	no_errors	PIEZO2	HGNC	ENSG00000154864	97	0	0.00	31	31	50.00	-	-	-
PLSCR2	0	genome.wustl.edu	37	3	146171913	146171913	+	Missense_Mutation	SNP	T	T	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	3	146171913	146171913	T	G	SNP	PLSCR2	ENST00000336685	human	ensembl	69_37n	-1	known	missense	c.359	p.Y120S	1.000	pfam_Scramblase	pfam_Scramblase,superfamily_Tubby_C-like	-	no_errors	PLSCR2	HGNC	ENSG00000163746	482	0	0.00	52	240	82.19	-	-	-
PPFIA1	0	genome.wustl.edu	37	11	70202345	70202345	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	11	70202345	70202345	G	A	SNP	PPFIA1	ENST00000253925	human	ensembl	69_37n	+1	known	missense	c.2567	p.R856H	0.895	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA1	HGNC	ENSG00000131626	162	0	0.00	311	37	10.63	-	-	-
PXDNL	0	genome.wustl.edu	37	8	52359611	52359611	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	8	52359611	52359611	G	A	SNP	PXDNL	ENST00000356297	human	ensembl	69_37n	-1	known	missense	c.1478	p.S493L	0.695	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like	-	no_errors	PXDNL	HGNC	ENSG00000147485	137	0	0.00	96	57	37.25	-	-	-
RAE1	0	genome.wustl.edu	37	20	55953115	55953115	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	20	55953115	55953115	G	A	SNP	RAE1	ENST00000371242	human	ensembl	69_37n	+1	known	missense	c.1067	p.R356H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RAE1	HGNC	ENSG00000101146	222	1	0.45	299	47	13.58	-	-	-
RAPGEF6	0	genome.wustl.edu	37	5	130769161	130769161	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	5	130769161	130769161	G	A	SNP	RAPGEF6	ENST00000509018	human	ensembl	69_37n	-1	known	silent	c.3936	p.H1312	0.610	NULL	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987	168	0	0.00	65	88	57.52	-	-	-
RBMXL3	0	genome.wustl.edu	37	X	114425210	114425210	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	X	114425210	114425210	G	A	SNP	RBMXL3	ENST00000424776	human	ensembl	69_37n	+1	known	silent	c.1206	p.G402	0.083	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL3	HGNC	ENSG00000175718	8	0	0.00	5	7	58.33	-	-	-
RDM1	0	genome.wustl.edu	37	17	34249590	34249590	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	17	34249590	34249590	C	A	SNP	RDM1	ENST00000293273	human	ensembl	69_37n	-1	known	missense	c.658	p.V220F	0.956	NULL	pfam_RRM_dom,pfam_Rad52_Rad22,pfscan_RRM_dom	-	no_errors	RDM1	HGNC	ENSG00000187456	346	1	0.29	402	59	12.80	-	-	-
RIC8A	0	genome.wustl.edu	37	11	212446	212446	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	11	212446	212446	G	C	SNP	RIC8A	ENST00000325207	human	ensembl	69_37n	+1	known	missense	c.1000	p.V334L	0.993	pfam_Gua_nucleotide_exch_fac_Ric8,superfamily_ARM-type_fold,prints_Synembryn	pfam_Gua_nucleotide_exch_fac_Ric8,superfamily_ARM-type_fold,prints_Synembryn	-	no_errors	RIC8A	HGNC	ENSG00000177963	30	0	0.00	16	6	27.27	-	-	-
RND1	0	genome.wustl.edu	37	12	49251827	49251827	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	12	49251827	49251827	G	C	SNP	RND1	ENST00000309739	human	ensembl	69_37n	-1	known	missense	c.651	p.I217M	1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RND1	HGNC	ENSG00000172602	239	0	0.00	188	57	23.27	-	-	-
RPGR	0	genome.wustl.edu	37	X	38145650	38145651	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	X	38145650	38145651	-	T	INS	RPGR	ENST00000378505	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2602_2601	p.E867fs	0.002:0.000	NULL	pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313	44	0	0.00	6	4	40.00	-	-	-
RYR2	0	genome.wustl.edu	37	1	237551480	237551480	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	1	237551480	237551480	G	A	SNP	RYR2	ENST00000360064	human	ensembl	69_37n	+1	known	missense	c.764	p.R255Q	1.000	pfam_MIR,superfamily_MIR,smart_MIR_motif,pfscan_MIR_motif	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	142	0	0.00	56	65	53.72	-	-	-
SCN10A	0	genome.wustl.edu	37	3	38793791	38793791	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	3	38793791	38793791	G	T	SNP	SCN10A	ENST00000449082	human	ensembl	69_37n	-1	known	missense	c.1674	p.S558R	0.283	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313	144	0	0.00	97	38	28.15	-	-	-
SCN2A	0	genome.wustl.edu	37	2	166245632	166245632	+	Silent	SNP	C	C	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	2	166245632	166245632	C	A	SNP	SCN2A	ENST00000283256	human	ensembl	69_37n	+1	known	silent	c.5316	p.I1772	0.956	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	380	0	0.00	35	33	48.53	-	-	-
SGK2	0	genome.wustl.edu	37	20	42195142	42195142	+	Missense_Mutation	SNP	T	T	C			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	20	42195142	42195142	T	C	SNP	SGK2	ENST00000341458	human	ensembl	69_37n	+1	known	missense	c.187	p.S63P	0.978	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_cat_dom	-	no_errors	SGK2	HGNC	ENSG00000101049	67	0	0.00	75	34	31.19	-	-	-
SHOX	0	genome.wustl.edu	37	X	591785	591785	+	Silent	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	X	591785	591785	G	A	SNP	SHOX	ENST00000381578	human	ensembl	69_37n	+1	known	silent	c.153	p.T51	0.978	NULL	pfam_Homeodomain,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_OAR_dom,pfscan_Homeodomain,prints_HTH_motif	-	no_errors	SHOX	HGNC	ENSG00000185960	78	0	0.00	42	19	31.15	-	-	-
STXBP5	0	genome.wustl.edu	37	6	147703925	147703926	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	6	147703925	147703926	-	A	INS	STXBP5	ENST00000321680	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3205_3206	p.S1069fs	0.856:0.998	NULL	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5	HGNC	ENSG00000164506	71	0	0.00	8	3	27.27	-	-	-
TEX14	0	genome.wustl.edu	37	17	56690897	56690897	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	17	56690897	56690897	C	T	SNP	TEX14	ENST00000240361	human	ensembl	69_37n	-1	known	missense	c.908	p.R303Q	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	TEX14	HGNC	ENSG00000121101	114	0	0.00	22	66	75.00	-	-	-
TMEM57	0	genome.wustl.edu	37	1	25783154	25783154	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	1	25783154	25783154	C	T	SNP	TMEM57	ENST00000374343	human	ensembl	69_37n	+1	known	missense	c.484	p.P162S	1.000	pfam_Macoilin	pfam_Macoilin,superfamily_Prefoldin	-	no_errors	TMEM57	HGNC	ENSG00000204178	114	0	0.00	18	29	61.70	-	-	-
TNFSF10	0	genome.wustl.edu	37	3	172224441	172224441	+	Silent	SNP	A	A	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	3	172224441	172224441	A	G	SNP	TNFSF10	ENST00000241261	human	ensembl	69_37n	-1	known	silent	c.687	p.S229	0.300	pfam_TNF,superfamily_Tumour_necrosis_fac-like,smart_TNF,pirsf_TNF_ligand_10/11,pfscan_TNF	pfam_TNF,superfamily_Tumour_necrosis_fac-like,smart_TNF,pirsf_TNF_ligand_10/11,pfscan_TNF	-	no_errors	TNFSF10	HGNC	ENSG00000121858	794	0	0.00	973	172	15.02	-	-	-
TP53	0	genome.wustl.edu	37	17	7578259	7578259	+	Missense_Mutation	SNP	A	A	C			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	17	7578259	7578259	A	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.590	p.V197G	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	216	2	0.91	44	113	71.97	-	-	-
TTLL4	0	genome.wustl.edu	37	2	219611916	219611916	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	2	219611916	219611916	C	T	SNP	TTLL4	ENST00000417196	human	ensembl	69_37n	+1	known	nonsense	c.496	p.Q166*	1.000	pfam_Tub_tyr_ligase	pfam_Tub_tyr_ligase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	TTLL4	HGNC	ENSG00000135912	115	0	0.00	73	27	27.00	-	-	-
TYRP1	0	genome.wustl.edu	37	9	12702411	12702414	+	Frame_Shift_Del	DEL	ACAA	ACAA	-			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	ACAA	ACAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	9	12702411	12702414	ACAA	-	DEL	TYRP1	ENST00000388918	human	ensembl	69_37n	+1	known	frame_shift_del	c.1054_1057	p.N353fs	1.000:1.000:0.997:0.999	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYRP1	HGNC	ENSG00000107165	224	0	0.00	18	20	51.28	-	-	-
VIL1	0	genome.wustl.edu	37	2	219295614	219295614	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	2	219295614	219295614	C	T	SNP	VIL1	ENST00000440053	human	ensembl	69_37n	+1	putative	missense	c.1115	p.A372V	0.000	NULL	pfam_Gelsolin_dom,smart_Gelsolin,prints_Gelsolin	-	no_errors	VIL1	HGNC	ENSG00000127831	21	0	0.00	3	20	86.96	-	-	-
ZNF778	0	genome.wustl.edu	37	16	89291996	89291996	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	16	89291996	89291996	G	A	SNP	ZNF778	ENST00000433976	human	ensembl	69_37n	+1	known	missense	c.278	p.R93Q	0.004	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF778	HGNC	ENSG00000170100	261	0	0.00	197	66	25.10	-	-	-
ZPLD1	0	genome.wustl.edu	37	3	102171957	102171957	+	Missense_Mutation	SNP	T	T	G			TCGA-AQ-A04H-01B-11D-A10M-09	TCGA-AQ-A04H-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	73c13e04-1400-4ebb-aa80-f54becbe036c	751944ed-705b-43b8-99fc-a49a6514941d	3	102171957	102171957	T	G	SNP	ZPLD1	ENST00000306176	human	ensembl	69_37n	+1	known	missense	c.349	p.L117V	1.000	pfam_Zona_pellucida_Endoglin/CD105,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105	pfam_Zona_pellucida_Endoglin/CD105,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105	-	no_errors	ZPLD1	HGNC	ENSG00000170044	117	0	0.00	55	19	25.68	-	-	-
