Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AHNAK2	0	genome.wustl.edu	37	14	105416976	105416976	+	Silent	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	14	105416976	105416976	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	69_37n	-1	known	silent	c.4812	p.D1604	0.013	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	88	0	0.00	73	20	21.51	-	-	-
AKAP9	0	genome.wustl.edu	37	7	91643582	91643582	+	Silent	SNP	A	A	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	7	91643582	91643582	A	G	SNP	AKAP9	ENST00000359028	human	ensembl	69_37n	+1	known	silent	c.3588	p.L1196	0.092	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB-like	-	no_errors	AKAP9	HGNC	ENSG00000127914	86	0	0.00	75	15	16.67	-	-	-
ATP6V1B2	0	genome.wustl.edu	37	8	20074770	20074770	+	Silent	SNP	T	T	C			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	8	20074770	20074770	T	C	SNP	ATP6V1B2	ENST00000276390	human	ensembl	69_37n	+1	known	silent	c.1201	p.L401	0.998	tigrfam_ATPase_V1-cplx_bsu	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,pfam_ATPase_F1/V1/A1-cplx_a/bsu_C,pfam_ATPase_F1/V1/A1-cplx_a/bsu_N,superfamily_ATPase_F1/V1/A1-cplx_a/bsu_C,tigrfam_ATPase_V1-cplx_bsu	-	no_errors	ATP6V1B2	HGNC	ENSG00000147416	80	0	0.00	34	11	24.44	-	-	-
BTBD19	0	genome.wustl.edu	37	1	45275937	45275937	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	1	45275937	45275937	T	A	SNP	BTBD19	ENST00000450269	human	ensembl	69_37n	+1	known	missense	c.139	p.C47S	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD19	HGNC	ENSG00000222009	45	0	0.00	36	8	17.39	-	-	-
CBL	0	genome.wustl.edu	37	11	119103255	119103255	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	11	119103255	119103255	T	C	SNP	CBL	ENST00000264033	human	ensembl	69_37n	+1	known	missense	c.293	p.I98T	1.000	pfam_Adaptor_Cbl_N_hlx,superfamily_Adaptor_Cbl_N_hlx	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/transl_elong_EF1B_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBL	HGNC	ENSG00000110395	49	0	0.00	37	7	15.91	-	-	-
CHL1	0	genome.wustl.edu	37	3	447268	447268	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	3	447268	447268	C	T	SNP	CHL1	ENST00000445697	human	ensembl	69_37n	+1	known	missense	c.950	p.T317	0.959	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CHL1	HGNC	ENSG00000134121	48	0	0.00	18	5	21.74	-	-	-
COL5A1	0	genome.wustl.edu	37	9	137707822	137707822	+	Silent	SNP	A	A	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	9	137707822	137707822	A	G	SNP	COL5A1	ENST00000371817	human	ensembl	69_37n	+1	known	silent	c.4110	p.E1370	0.400	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635	66	0	0.00	56	10	14.93	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16950470	16950470	+	RNA	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	1	16950470	16950470	C	T	SNP	CROCCP2	ENST00000421700	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	23	0	0.00	31	6	16.22	-	-	-
FLRT2	0	genome.wustl.edu	37	14	86088323	86088323	+	Silent	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	14	86088323	86088323	C	T	SNP	FLRT2	ENST00000330753	human	ensembl	69_37n	+1	known	silent	c.465	p.F155	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070	28	0	0.00	30	5	14.29	-	-	-
HEATR8	0	genome.wustl.edu	37	1	55166925	55166925	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	1	55166925	55166925	G	A	SNP	HEATR8	ENST00000421030	human	ensembl	69_37n	+1	known	missense	c.3215	p.R1072Q	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR8	HGNC	ENSG00000184313	42	0	0.00	56	10	15.15	-	-	-
ICOSLG	0	genome.wustl.edu	37	21	45651313	45651313	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	21	45651313	45651313	C	A	SNP	ICOSLG	ENST00000344330	human	ensembl	69_37n	-1	known	nonsense	c.712	p.E238*	0.000	NULL	pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	ICOSLG	HGNC	ENSG00000160223	74	0	0.00	44	26	37.14	-	-	-
IL3RA	0	genome.wustl.edu	37	X	1475125	1475125	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	X	1475125	1475125	C	G	SNP	IL3RA	ENST00000331035	human	ensembl	69_37n	+1	known	missense	c.628	p.P210A	0.027	superfamily_Fibronectin_type3	pfam_IL6_recept-bd,superfamily_Fibronectin_type3	-	no_errors	IL3RA	HGNC	ENSG00000185291	54	0	0.00	48	15	23.81	-	-	-
IL4R	0	genome.wustl.edu	37	16	27375135	27375135	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	16	27375135	27375135	A	G	SNP	IL4R	ENST00000170630	human	ensembl	69_37n	+1	known	missense	c.2462	p.Y821C	0.000	NULL	pfam_IL4Ra_N,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL4R	HGNC	ENSG00000077238	26	0	0.00	9	6	37.50	-	-	-
JPH4	0	genome.wustl.edu	37	14	24040436	24040436	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	14	24040436	24040436	C	-	DEL	JPH4	ENST00000356300	human	ensembl	69_37n	-1	known	frame_shift_del	c.1504	p.A502fs	0.057	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH4	HGNC	ENSG00000092051	15	0	0.00	15	3	16.67	-	-	-
KIAA1109	0	genome.wustl.edu	37	4	123202768	123202768	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	4	123202768	123202768	T	A	SNP	KIAA1109	ENST00000419325	human	ensembl	69_37n	+1	putative	nonsense	c.2748	p.C916*	0.999	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	KIAA1109	HGNC	ENSG00000138688	57	0	0.00	39	13	25.00	-	-	-
KIAA1109	0	genome.wustl.edu	37	4	123271039	123271039	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	4	123271039	123271039	G	C	SNP	KIAA1109	ENST00000264501	human	ensembl	69_37n	+1	known	missense	c.13659	p.K4553N	1.000	pfam_Fragile_site-assoc_C	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	62	0	0.00	48	7	12.73	-	-	-
KIF4A	0	genome.wustl.edu	37	X	69639610	69639610	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	X	69639610	69639610	G	A	SNP	KIF4A	ENST00000374403	human	ensembl	69_37n	+1	known	missense	c.3472	p.V1158I	0.976	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4A	HGNC	ENSG00000090889	42	0	0.00	50	9	15.25	-	-	-
LRRC37A6P	0	genome.wustl.edu	37	10	27540072	27540072	+	RNA	SNP	C	C	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	10	27540072	27540072	C	A	SNP	LRRC37A6P	ENST00000574795	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	LRRC37A6P	HGNC	ENSG00000230445	10	0	0.00	13	4	23.53	-	-	-
MASP1	0	genome.wustl.edu	37	3	186961340	186961340	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	3	186961340	186961340	G	C	SNP	MASP1	ENST00000296280	human	ensembl	69_37n	-1	known	missense	c.1160	p.T387S	1.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Peptidase_S1_S6,pfam_CUB,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd,superfamily_Pept_cys/ser_Trypsin-like,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_EGF-like_Ca-bd,smart_Sushi_SCR_CCP,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_CUB,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1_S6	-	no_errors	MASP1	HGNC	ENSG00000127241	107	0	0.00	78	12	13.33	-	-	-
MLL3	0	genome.wustl.edu	37	7	151945451	151945451	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	7	151945451	151945451	C	A	SNP	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	nonsense	c.2068	p.E690*	0.069	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	79	0	0.00	69	27	28.12	-	-	-
MTMR8	0	genome.wustl.edu	37	X	63490847	63490847	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	X	63490847	63490847	C	T	SNP	MTMR8	ENST00000374852	human	ensembl	69_37n	-1	known	missense	c.1588	p.D530N	0.011	NULL	pfam_Myotub-related,smart_Tyr_Pase_cat	-	no_errors	MTMR8	HGNC	ENSG00000102043	75	0	0.00	62	12	16.22	-	-	-
MUC16	0	genome.wustl.edu	37	19	9073430	9073430	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	19	9073430	9073430	C	G	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.14016	p.M4672I	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	67	0	0.00	42	30	41.67	-	-	-
NDUFA4	0	genome.wustl.edu	37	7	10978513	10978514	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	7	10978513	10978514	-	G	INS	NDUFA4	ENST00000339600	human	ensembl	69_37n	-1	known	frame_shift_ins	c.53_52	p.L18fs	0.961:0.958	NULL	NULL	-	no_errors	NDUFA4	HGNC	ENSG00000189043	41	0	0.00	33	6	15.38	-	-	-
PCDHB11	0	genome.wustl.edu	37	5	140581057	140581057	+	Silent	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	5	140581057	140581057	G	A	SNP	PCDHB11	ENST00000354757	human	ensembl	69_37n	+1	known	silent	c.1710	p.A570	0.001	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479	23	0	0.00	8	4	30.77	-	-	-
PDC	0	genome.wustl.edu	37	1	186413472	186413472	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	1	186413472	186413472	A	G	SNP	PDC	ENST00000340129	human	ensembl	69_37n	-1	known	missense	c.380	p.I127T	1.000	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	-	no_errors	PDC	HGNC	ENSG00000116703	45	0	0.00	40	23	36.51	-	-	-
PDCD6	0	genome.wustl.edu	37	5	272863	272863	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	5	272863	272863	G	A	SNP	PDCD6	ENST00000264933	human	ensembl	69_37n	+1	known	missense	c.139	p.E47K	0.989	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	PDCD6	HGNC	ENSG00000249915	67	0	0.00	32	11	25.58	-	-	-
PELI2	0	genome.wustl.edu	37	14	56763462	56763462	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	14	56763462	56763462	C	T	SNP	PELI2	ENST00000267460	human	ensembl	69_37n	+1	known	missense	c.841	p.R281W	0.998	pfam_Pellino	pfam_Pellino	-	no_errors	PELI2	HGNC	ENSG00000139946	29	0	0.00	24	4	14.29	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	74	0	0.00	33	30	47.62	-	-	-
PNPT1	0	genome.wustl.edu	37	2	55894154	55894154	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	2	55894154	55894154	G	A	SNP	PNPT1	ENST00000415374	human	ensembl	69_37n	-1	known	missense	c.1148	p.S383L	1.000	pfam_ExoRNase_PH_dom1,superfamily_Ribosomal_S5_D2-typ_fold,pirsf_PNPase,tigrfam_PNPase	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,pfam_PNPase_PH_RNA-bd_bac/org-type,pfam_KH_dom_type_1,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2,superfamily_PNPase_PH_RNA-bd_bac/org-type,superfamily_NA-bd_OB-fold-like,smart_KH_dom,smart_RNA-binding_domain_S1,pirsf_PNPase,pfscan_KH_dom_type_1,pfscan_Rbsml_prot_S1_RNA-bd_dom,tigrfam_PNPase	-	no_errors	PNPT1	HGNC	ENSG00000138035	87	0	0.00	69	10	12.66	-	-	-
RALB	0	genome.wustl.edu	37	2	121043616	121043616	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	2	121043616	121043616	C	T	SNP	RALB	ENST00000474855	human	ensembl	69_37n	+1	known	missense	c.347	p.S116L	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,pfam_SRP_receptor_beta_su,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,pfam_SRP_receptor_beta_su,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RALB	HGNC	ENSG00000144118	57	0	0.00	62	13	17.11	-	-	-
RELN	0	genome.wustl.edu	37	7	103206817	103206817	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	7	103206817	103206817	C	T	SNP	RELN	ENST00000424685	human	ensembl	69_37n	-1	known	missense	c.4790	p.G1597E	1.000	NULL	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Neuraminidase,superfamily_Growth_fac_rcpt,smart_EGF-like,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056	58	0	0.00	54	11	16.92	-	-	-
RHBDL3	0	genome.wustl.edu	37	17	30648095	30648095	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	17	30648095	30648095	C	T	SNP	RHBDL3	ENST00000431505	human	ensembl	69_37n	+1	putative	missense	c.961	p.R321C	0.932	NULL	pfam_Peptidase_S54_rhomboid_dom,pfscan_EF_HAND_2	-	no_stop_codon	RHBDL3	HGNC	ENSG00000141314	83	0	0.00	63	12	16.00	-	-	-
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037896	10037896	+	RNA	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	Y	10037896	10037896	C	T	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705	10	0	0.00	9	6	40.00	-	-	-
TMEM241	0	genome.wustl.edu	37	18	20936610	20936610	+	Silent	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	18	20936610	20936610	G	A	SNP	TMEM241	ENST00000383233	human	ensembl	69_37n	-1	known	silent	c.619	p.L207	0.988	NULL	NULL	-	no_errors	TMEM241	HGNC	ENSG00000134490	44	0	0.00	14	17	54.84	-	-	-
TP53	0	genome.wustl.edu	37	17	7577096	7577096	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	17	7577096	7577096	T	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.842	p.D281V	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	63	0	0.00	13	15	53.57	-	-	-
TYR	0	genome.wustl.edu	37	11	88911832	88911832	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	11	88911832	88911832	C	A	SNP	TYR	ENST00000263321	human	ensembl	69_37n	+1	known	missense	c.711	p.D237E	0.999	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498	50	0	0.00	32	5	13.51	-	-	-
UBA1	0	genome.wustl.edu	37	X	47061807	47061807	+	Silent	SNP	C	C	T			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	X	47061807	47061807	C	T	SNP	UBA1	ENST00000335972	human	ensembl	69_37n	+1	known	silent	c.960	p.F320	0.938	superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA1	HGNC	ENSG00000130985	69	0	0.00	40	7	14.89	-	-	-
UPRT	0	genome.wustl.edu	37	X	74519659	74519659	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	X	74519659	74519659	G	A	SNP	UPRT	ENST00000373383	human	ensembl	69_37n	+1	known	missense	c.652	p.A218T	1.000	pfam_PRibTrfase	pfam_PRibTrfase	-	no_errors	UPRT	HGNC	ENSG00000094841	55	0	0.00	39	16	29.09	-	-	-
WDR46	0	genome.wustl.edu	37	6	33255278	33255278	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	6	33255278	33255278	G	C	SNP	WDR46	ENST00000374617	human	ensembl	69_37n	-1	known	missense	c.733	p.L245V	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_BING4_C_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR46	HGNC	ENSG00000227057	34	0	0.00	25	6	19.35	-	-	-
ZNF578	0	genome.wustl.edu	37	19	53005128	53005128	+	Silent	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	19	53005128	53005128	G	A	SNP	ZNF578	ENST00000421239	human	ensembl	69_37n	+1	known	silent	c.30	p.R10	0.105	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF578	HGNC	ENSG00000258405	138	0	0.00	65	15	18.75	-	-	-
ZNF648	0	genome.wustl.edu	37	1	182025773	182025773	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	1	182025773	182025773	G	A	SNP	ZNF648	ENST00000339948	human	ensembl	69_37n	-1	known	missense	c.1373	p.A458V	0.985	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930	31	0	0.00	22	7	24.14	-	-	-
ZNF699	0	genome.wustl.edu	37	19	9408556	9408556	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	19	9408556	9408556	C	A	SNP	ZNF699	ENST00000308650	human	ensembl	69_37n	-1	known	missense	c.286	p.G96C	0.991	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF699	HGNC	ENSG00000196110	56	0	0.00	70	9	11.39	-	-	-
ZNF814	0	genome.wustl.edu	37	19	58385256	58385256	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	19	58385256	58385256	A	G	SNP	ZNF814	ENST00000435989	human	ensembl	69_37n	-1	known	missense	c.1502	p.F501S	0.482	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF814	HGNC	ENSG00000204514	89	0	0.00	52	13	20.00	-	-	-
ZNF880	0	genome.wustl.edu	37	19	52888293	52888293	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A24S-01A-11D-A167-09	TCGA-AR-A24S-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	aad32a56-5b98-433e-bb6e-48e09a027db6	1385c890-fc86-404f-96f9-90d1bd595b10	19	52888293	52888293	C	G	SNP	ZNF880	ENST00000422689	human	ensembl	69_37n	+1	known	missense	c.1460	p.T487S	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF880	HGNC	ENSG00000221923	67	0	0.00	30	9	23.08	-	-	-
