Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA6	0	genome.wustl.edu	37	17	67080498	67080498	+	Splice_Site	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	67080498	67080498	T	C	SNP	ABCA6	ENST00000284425	human	ensembl	69_37n	-1	known	splice_site	c.4261-2	e33-2	1.000	-	-	-	no_errors	ABCA6	HGNC	ENSG00000154262	77	0	0.00	70	25	26.32	-	-	-
ABCA7	0	genome.wustl.edu	37	19	1061826	1061827	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	1061826	1061827	TT	-	DEL	ABCA7	ENST00000263094	human	ensembl	69_37n	+1	known	frame_shift_del	c.5509_5510	p.F1837fs	0.995:1.000	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687	46	0	0.00	43	6	12.00	-	-	-
ABCC11	0	genome.wustl.edu	37	16	48245083	48245083	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	16	48245083	48245083	A	T	SNP	ABCC11	ENST00000356608	human	ensembl	69_37n	-1	known	missense	c.1384	p.F462I	0.000	superfamily_ABC_transptrTM_dom_typ1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCC11	HGNC	ENSG00000121270	40	0	0.00	16	16	50.00	-	-	-
ACAT1	0	genome.wustl.edu	37	11	108017053	108017053	+	Missense_Mutation	SNP	A	A	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	108017053	108017053	A	C	SNP	ACAT1	ENST00000265838	human	ensembl	69_37n	+1	known	missense	c.1130	p.N377T	0.998	pfam_Thiolase_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,pfam_Ketoacyl_synth_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAT1	HGNC	ENSG00000075239	87	0	0.00	28	11	28.21	-	-	-
ACSM4	0	genome.wustl.edu	37	12	7473395	7473395	+	Silent	SNP	T	T	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	7473395	7473395	T	G	SNP	ACSM4	ENST00000399422	human	ensembl	69_37n	+1	novel	silent	c.996	p.L332	0.983	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM4	HGNC	ENSG00000215009	44	0	0.00	14	66	82.50	-	-	-
ACTN2	0	genome.wustl.edu	37	1	236918429	236918429	+	Silent	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	236918429	236918429	G	T	SNP	ACTN2	ENST00000366578	human	ensembl	69_37n	+1	known	silent	c.2085	p.L695	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_Ca-bd,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	ACTN2	HGNC	ENSG00000077522	20	0	0.00	25	24	48.98	-	-	-
ADAM33	0	genome.wustl.edu	37	20	3655440	3655440	+	Silent	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	20	3655440	3655440	G	C	SNP	ADAM33	ENST00000356518	human	ensembl	69_37n	-1	known	silent	c.390	p.L130	1.000	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM33	HGNC	ENSG00000149451	31	0	0.00	58	10	14.71	-	-	-
ADAMTSL3	0	genome.wustl.edu	37	15	84568455	84568455	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	15	84568455	84568455	G	C	SNP	ADAMTSL3	ENST00000286744	human	ensembl	69_37n	+1	known	missense	c.1672	p.E558Q	1.000	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218	55	0	0.00	12	35	74.47	-	-	-
ADCY2	0	genome.wustl.edu	37	5	7709446	7709446	+	Silent	SNP	A	A	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	5	7709446	7709446	A	G	SNP	ADCY2	ENST00000338316	human	ensembl	69_37n	+1	known	silent	c.1524	p.A508	0.588	pfam_Adenylate_cyclase-like	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY2	HGNC	ENSG00000078295	36	0	0.00	27	13	32.50	-	-	-
AHNAK2	0	genome.wustl.edu	37	14	105412163	105412163	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	14	105412163	105412163	C	G	SNP	AHNAK2	ENST00000333244	human	ensembl	69_37n	-1	known	missense	c.9625	p.V3209L	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	41	0	0.00	4	3	42.86	-	-	-
ANK3	0	genome.wustl.edu	37	10	61831529	61831529	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	61831529	61831529	G	C	SNP	ANK3	ENST00000280772	human	ensembl	69_37n	-1	known	missense	c.9110	p.P3037R	0.934	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	31	0	0.00	15	11	42.31	-	-	-
ANKRD19P	0	genome.wustl.edu	37	9	95599746	95599746	+	RNA	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	9	95599746	95599746	C	T	SNP	ANKRD19P	ENST00000464387	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.252	-	-	-	no_errors	ANKRD19P	HGNC	ENSG00000187984	28	0	0.00	22	9	29.03	-	-	-
AP4E1	0	genome.wustl.edu	37	15	51233946	51233946	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	15	51233946	51233946	C	T	SNP	AP4E1	ENST00000261842	human	ensembl	69_37n	+1	known	missense	c.1150	p.H384Y	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_bsu_C,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	-	no_errors	AP4E1	HGNC	ENSG00000081014	94	0	0.00	18	36	66.67	-	-	-
ARAP2	0	genome.wustl.edu	37	4	36130231	36130231	+	Silent	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	4	36130231	36130231	C	A	SNP	ARAP2	ENST00000303965	human	ensembl	69_37n	-1	known	silent	c.3564	p.V1188	0.364	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_ArfGAP,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	77	0	0.00	9	31	77.50	-	-	-
ARAP3	0	genome.wustl.edu	37	5	141051281	141051281	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	5	141051281	141051281	G	T	SNP	ARAP3	ENST00000239440	human	ensembl	69_37n	-1	known	missense	c.1710	p.F570L	1.000	pfam_ArfGAP,superfamily_ArfGAP,smart_ArfGAP,pfscan_ArfGAP	pfam_RhoGAP_dom,pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ras-assoc,pfam_SAM_2,pfam_SAM_type1,superfamily_Rho_GTPase_activation_prot,superfamily_ArfGAP,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP3	HGNC	ENSG00000120318	32	0	0.00	2	22	91.67	-	-	-
ASTN1	0	genome.wustl.edu	37	1	177001636	177001636	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	177001636	177001636	G	A	SNP	ASTN1	ENST00000367654	human	ensembl	69_37n	-1	known	missense	c.821	p.S274F	1.000	NULL	superfamily_Fibronectin_type3,smart_EGF-like,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092	39	0	0.00	56	10	14.93	-	-	-
BAI3	0	genome.wustl.edu	37	6	70071303	70071303	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	70071303	70071303	C	A	SNP	BAI3	ENST00000370598	human	ensembl	69_37n	+1	known	missense	c.4138	p.P1380T	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	46	0	0.00	16	19	54.29	-	-	-
BIN2	0	genome.wustl.edu	37	12	51685681	51685681	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	51685681	51685681	C	T	SNP	BIN2	ENST00000267012	human	ensembl	69_37n	-1	known	silent	c.1209	p.K403	0.002	NULL	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom,prints_Amphiphysin	-	no_errors	BIN2	HGNC	ENSG00000110934	67	0	0.00	19	32	62.75	-	-	-
BIRC6	0	genome.wustl.edu	37	2	32654312	32654312	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	32654312	32654312	T	C	SNP	BIRC6	ENST00000421745	human	ensembl	69_37n	+1	known	missense	c.2971	p.S991P	0.980	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	74	0	0.00	55	11	16.67	-	-	-
BRSK2	0	genome.wustl.edu	37	11	1464595	1464595	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	1464595	1464595	G	T	SNP	BRSK2	ENST00000382179	human	ensembl	69_37n	+1	known	missense	c.733	p.V245L	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	BRSK2	HGNC	ENSG00000174672	11	0	0.00	4	15	78.95	-	-	-
C10orf68	0	genome.wustl.edu	37	10	33000568	33000568	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	33000568	33000568	G	C	SNP	C10orf68	ENST00000375025	human	ensembl	69_37n	+1	known	missense	c.400	p.E134Q	0.001	NULL	NULL	-	no_errors	C10orf68	HGNC	ENSG00000150076	44	0	0.00	33	8	19.51	-	-	-
C15orf23	0	genome.wustl.edu	37	15	40675104	40675104	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	15	40675104	40675104	A	T	SNP	C15orf23	ENST00000249776	human	ensembl	69_37n	+1	known	missense	c.68	p.D23V	0.000	NULL	NULL	-	no_errors	C15orf23	HGNC	ENSG00000128944	21	0	0.00	15	6	28.57	-	-	-
C2orf16	0	genome.wustl.edu	37	2	27800889	27800889	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	27800889	27800889	C	A	SNP	C2orf16	ENST00000408964	human	ensembl	69_37n	+1	known	missense	c.1450	p.Q484K	0.006	NULL	NULL	-	no_errors	C2orf16	HGNC	ENSG00000221843	37	0	0.00	36	18	33.33	-	-	-
CAPN2	0	genome.wustl.edu	37	1	223934702	223934702	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	223934702	223934702	C	G	SNP	CAPN2	ENST00000295006	human	ensembl	69_37n	+1	known	missense	c.564	p.I188M	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,prints_Calpain_cysteine_protease,pfscan_EF_HAND_2,pfscan_Peptidase_C2_calpain_cat	-	no_errors	CAPN2	HGNC	ENSG00000162909	37	0	0.00	25	39	60.00	-	-	-
CASC1	0	genome.wustl.edu	37	12	25311497	25311497	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	25311497	25311497	T	C	SNP	CASC1	ENST00000395987	human	ensembl	69_37n	-1	known	missense	c.107	p.E36G	1.000	NULL	pfam_Casc1_domain,prints_Casc1	-	no_errors	CASC1	HGNC	ENSG00000118307	109	0	0.00	90	11	10.89	-	-	-
CCDC135	0	genome.wustl.edu	37	16	57741527	57741527	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	16	57741527	57741527	C	G	SNP	CCDC135	ENST00000360716	human	ensembl	69_37n	+1	known	missense	c.1014	p.I338M	0.008	NULL	NULL	-	no_errors	CCDC135	HGNC	ENSG00000159625	34	0	0.00	24	12	33.33	-	-	-
CDC42BPG	0	genome.wustl.edu	37	11	64606639	64606639	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	64606639	64606639	C	A	SNP	CDC42BPG	ENST00000342711	human	ensembl	69_37n	-1	known	nonsense	c.742	p.E248*	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_PAK_box_Rho-bd,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219	25	0	0.00	14	17	54.84	-	-	-
CEACAM5	0	genome.wustl.edu	37	19	42221424	42221424	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	42221424	42221424	G	A	SNP	CEACAM5	ENST00000221992	human	ensembl	69_37n	+1	known	missense	c.1009	p.D337N	0.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	CEACAM5	HGNC	ENSG00000105388	81	0	0.00	76	51	40.16	-	-	-
CHADL	0	genome.wustl.edu	37	22	41635564	41635564	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	22	41635564	41635564	G	A	SNP	CHADL	ENST00000417999	human	ensembl	69_37n	-1	known	missense	c.62	p.P21L	0.982	NULL	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CHADL	HGNC	ENSG00000100399	8	0	0.00	7	13	65.00	-	-	-
CHD5	0	genome.wustl.edu	37	1	6181593	6181593	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	6181593	6181593	G	T	SNP	CHD5	ENST00000262450	human	ensembl	69_37n	-1	known	missense	c.4740	p.D1580E	0.648	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254	37	0	0.00	7	21	72.41	-	-	-
CLOCK	0	genome.wustl.edu	37	4	56345865	56345865	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	4	56345865	56345865	C	A	SNP	CLOCK	ENST00000309964	human	ensembl	69_37n	-1	known	missense	c.49	p.D17Y	1.000	NULL	pfam_PAS_fold_3,pfam_PAS_fold,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,smart_PAS,smart_PAC,pfscan_PAS,pfscan_HLH_DNA-bd,prints_Nuc_translocat	-	no_errors	CLOCK	HGNC	ENSG00000134852	115	0	0.00	17	55	76.39	-	-	-
CMAS	0	genome.wustl.edu	37	12	22214246	22214246	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	22214246	22214246	G	T	SNP	CMAS	ENST00000229329	human	ensembl	69_37n	+1	known	nonsense	c.820	p.E274*	1.000	pfam_Cytidylyl_trans,superfamily_HAD-like_dom	pfam_Cytidylyl_trans,superfamily_HAD-like_dom	-	no_errors	CMAS	HGNC	ENSG00000111726	63	0	0.00	47	24	33.33	-	-	-
CNTNAP2	0	genome.wustl.edu	37	7	146471394	146471394	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	7	146471394	146471394	C	T	SNP	CNTNAP2	ENST00000361727	human	ensembl	69_37n	+1	known	silent	c.129	p.L43	0.593	superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EGF-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC	ENSG00000174469	76	0	0.00	20	10	33.33	-	-	-
COL22A1	0	genome.wustl.edu	37	8	139890242	139890242	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	8	139890242	139890242	G	T	SNP	COL22A1	ENST00000303045	human	ensembl	69_37n	-1	known	missense	c.409	p.P137T	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436	15	0	0.00	16	9	36.00	-	-	-
CPN2	0	genome.wustl.edu	37	3	194063051	194063051	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	194063051	194063051	G	A	SNP	CPN2	ENST00000323830	human	ensembl	69_37n	-1	known	silent	c.381	p.T127	0.656	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	CPN2	HGNC	ENSG00000178772	38	0	0.00	23	24	50.00	-	-	-
CTR9	0	genome.wustl.edu	37	11	10792118	10792118	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	10792118	10792118	G	A	SNP	CTR9	ENST00000361367	human	ensembl	69_37n	+1	known	missense	c.2311	p.D771N	1.000	NULL	pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CTR9	HGNC	ENSG00000198730	80	0	0.00	24	32	57.14	-	-	-
CYP26B1	0	genome.wustl.edu	37	2	72360334	72360334	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	72360334	72360334	G	T	SNP	CYP26B1	ENST00000001146	human	ensembl	69_37n	-1	known	missense	c.964	p.L322M	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP26B1	HGNC	ENSG00000003137	12	0	0.00	7	4	36.36	-	-	-
DALRD3	0	genome.wustl.edu	37	3	49054878	49054878	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	49054878	49054878	G	A	SNP	DALRD3	ENST00000341949	human	ensembl	69_37n	-1	known	missense	c.787	p.H263Y	0.000	NULL	pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,smart_DALR_anticod-bd	-	no_errors	DALRD3	HGNC	ENSG00000178149	36	0	0.00	21	13	38.24	-	-	-
DCUN1D1	0	genome.wustl.edu	37	3	182665361	182665361	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	182665361	182665361	C	T	SNP	DCUN1D1	ENST00000292782	human	ensembl	69_37n	-1	known	missense	c.580	p.D194N	1.000	pfam_PONY_dom	pfam_PONY_dom,superfamily_UBA-like	-	no_errors	DCUN1D1	HGNC	ENSG00000043093	57	0	0.00	51	15	22.39	-	-	-
DNAJA4	0	genome.wustl.edu	37	15	78566657	78566657	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	15	78566657	78566657	C	T	SNP	DNAJA4	ENST00000394855	human	ensembl	69_37n	+1	known	silent	c.624	p.I208	0.000	pfam_HSP_DnaJ_Cys-rich_dom,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,pfscan_HSP_DnaJ_Cys-rich_dom	pfam_DnaJ_N,pfam_DnaJ_C,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_N,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_N,pfscan_DnaJ_N,pfscan_HSP_DnaJ_Cys-rich_dom,prints_Hsp_DnaJ	-	no_errors	DNAJA4	HGNC	ENSG00000140403	26	0	0.00	7	19	73.08	-	-	-
DOM3Z	0	genome.wustl.edu	37	6	31937797	31937797	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	31937797	31937797	C	T	SNP	DOM3Z	ENST00000337523	human	ensembl	69_37n	-1	known	missense	c.1048	p.V350I	0.996	NULL	pfam_RAI1	-	no_errors	DOM3Z	HGNC	ENSG00000204348	16	0	0.00	13	19	59.38	-	-	-
DPYSL5	0	genome.wustl.edu	37	2	27165483	27165483	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	27165483	27165483	G	A	SNP	DPYSL5	ENST00000288699	human	ensembl	69_37n	+1	known	silent	c.1305	p.V435	0.754	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL5	HGNC	ENSG00000157851	12	0	0.00	15	15	50.00	-	-	-
EFEMP2	0	genome.wustl.edu	37	11	65638053	65638053	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	65638053	65638053	C	G	SNP	EFEMP2	ENST00000307998	human	ensembl	69_37n	-1	known	missense	c.444	p.Q148H	1.000	pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd,superfamily_TIL_dom,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	EFEMP2	HGNC	ENSG00000172638	26	0	0.00	26	13	33.33	-	-	-
ENKUR	0	genome.wustl.edu	37	10	25284628	25284628	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	25284628	25284628	C	T	SNP	ENKUR	ENST00000331161	human	ensembl	69_37n	-1	known	missense	c.394	p.D132N	1.000	NULL	NULL	-	no_errors	ENKUR	HGNC	ENSG00000151023	90	0	0.00	82	34	29.06	-	-	-
EPS8L2	0	genome.wustl.edu	37	11	726965	726965	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	726965	726965	G	-	DEL	EPS8L2	ENST00000318562	human	ensembl	69_37n	+1	known	frame_shift_del	c.2132	p.E713fs	0.028	NULL	pfam_PTB,pfam_SH3_domain,pfam_PTyr_interaction_dom,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTyr_interaction_dom,smart_SH3_domain,pfscan_PTyr_interaction_dom,pfscan_SH3_domain	-	no_errors	EPS8L2	HGNC	ENSG00000177106	26	0	0.00	6	12	60.00	-	-	-
ESCO2	0	genome.wustl.edu	37	8	27634128	27634128	+	Silent	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	8	27634128	27634128	G	C	SNP	ESCO2	ENST00000305188	human	ensembl	69_37n	+1	known	silent	c.303	p.L101	0.993	NULL	NULL	-	no_errors	ESCO2	HGNC	ENSG00000171320	54	0	0.00	11	48	81.36	-	-	-
ESPL1	0	genome.wustl.edu	37	12	53676930	53676930	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	53676930	53676930	A	G	SNP	ESPL1	ENST00000257934	human	ensembl	69_37n	+1	known	missense	c.2809	p.I937V	0.998	NULL	pfam_Peptidase_C50	-	no_errors	ESPL1	HGNC	ENSG00000135476	64	0	0.00	12	36	75.00	-	-	-
ESPNP	0	genome.wustl.edu	37	1	17017759	17017759	+	RNA	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	17017759	17017759	G	C	SNP	ESPNP	ENST00000492551	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ESPNP	HGNC	ENSG00000116219	31	0	0.00	7	15	68.18	-	-	-
ETV3	0	genome.wustl.edu	37	1	157095097	157095097	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	157095097	157095097	C	T	SNP	ETV3	ENST00000368192	human	ensembl	69_37n	-1	known	missense	c.1075	p.V359I	0.351	NULL	pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ETV3	HGNC	ENSG00000117036	29	0	0.00	32	15	31.91	-	-	-
EVC2	0	genome.wustl.edu	37	4	5624640	5624640	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	4	5624640	5624640	G	A	SNP	EVC2	ENST00000344408	human	ensembl	69_37n	-1	known	nonsense	c.2125	p.Q709*	0.838	NULL	pfam_EVC2-like	-	no_errors	EVC2	HGNC	ENSG00000173040	17	0	0.00	7	4	36.36	-	-	-
F5	0	genome.wustl.edu	37	1	169498986	169498986	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	169498986	169498986	C	G	SNP	F5	ENST00000367796	human	ensembl	69_37n	-1	known	missense	c.5294	p.S1765T	0.991	superfamily_Cupredoxin	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734	70	0	0.00	117	20	14.60	-	-	-
FAM65A	0	genome.wustl.edu	37	16	67580080	67580080	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	16	67580080	67580080	C	T	SNP	FAM65A	ENST00000422602	human	ensembl	69_37n	+1	known	nonsense	c.3568	p.Q1190*	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,superfamily_HR1_rho-bd	-	no_errors	FAM65A	HGNC	ENSG00000039523	29	0	0.00	14	5	26.32	-	-	-
FAM65C	0	genome.wustl.edu	37	20	49208921	49208921	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	20	49208921	49208921	C	G	SNP	FAM65C	ENST00000535356	human	ensembl	69_37n	-1	known	missense	c.2537	p.R846P	0.440	superfamily_ARM-type_fold	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	14	0	0.00	18	6	25.00	-	-	-
FAM65C	0	genome.wustl.edu	37	20	49236530	49236530	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	20	49236530	49236530	C	G	SNP	FAM65C	ENST00000535356	human	ensembl	69_37n	-1	known	missense	c.262	p.G88R	1.000	superfamily_Chemokine_IL8-like_dom	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	36	0	0.00	29	28	48.28	-	-	-
FASN	0	genome.wustl.edu	37	17	80041432	80041432	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	80041432	80041432	C	T	SNP	FASN	ENST00000306749	human	ensembl	69_37n	-1	known	missense	c.5302	p.E1768K	1.000	pfam_ADH_C,smart_PKS_ER	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	17	0	0.00	33	25	43.10	-	-	-
FBXW7	0	genome.wustl.edu	37	4	153247168	153247168	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	4	153247168	153247168	T	C	SNP	FBXW7	ENST00000281708	human	ensembl	69_37n	-1	known	missense	c.1634	p.Y545C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom_cyclin-like,superfamily_WD40_repeat_dom,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_F-box_dom_cyclin-like,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FBXW7	HGNC	ENSG00000109670	62	0	0.00	8	22	73.33	-	-	-
FER	0	genome.wustl.edu	37	5	108516525	108516525	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	5	108516525	108516525	A	G	SNP	FER	ENST00000281092	human	ensembl	69_37n	+1	known	missense	c.2126	p.E709G	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_FCH,superfamily_Kinase-like_dom,smart_FCH,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FCH,pfscan_SH2,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	FER	HGNC	ENSG00000151422	61	0	0.00	33	25	43.10	-	-	-
FKBP15	0	genome.wustl.edu	37	9	115931533	115931533	+	Silent	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	9	115931533	115931533	G	C	SNP	FKBP15	ENST00000238256	human	ensembl	69_37n	-1	known	silent	c.3456	p.L1152	0.000	NULL	pfam_PPIase_FKBP_dom,superfamily_Regulat_G_prot_signal_superfam,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP15	HGNC	ENSG00000119321	62	0	0.00	38	30	44.12	-	-	-
FRG1	0	genome.wustl.edu	37	4	190873403	190873403	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	4	190873403	190873403	G	A	SNP	FRG1	ENST00000226798	human	ensembl	69_37n	+1	known	missense	c.220	p.D74N	1.000	pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking	pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FRG1	HGNC	ENSG00000109536	38	0	0.00	5	7	58.33	-	-	-
FRMPD2	0	genome.wustl.edu	37	10	49386172	49386172	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	49386172	49386172	G	A	SNP	FRMPD2	ENST00000374201	human	ensembl	69_37n	-1	known	missense	c.2813	p.P938L	0.001	superfamily_PDZ	pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_PDZ,superfamily_FERM_central,superfamily_Kinase-like_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,pfscan_FERM_domain,pfscan_PDZ,prints_Band_41_fam	-	no_errors	FRMPD2	HGNC	ENSG00000170324	64	0	0.00	29	23	44.23	-	-	-
GANAB	0	genome.wustl.edu	37	11	62402465	62402465	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	62402465	62402465	C	A	SNP	GANAB	ENST00000346178	human	ensembl	69_37n	-1	known	missense	c.388	p.V130F	0.150	superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd	-	no_errors	GANAB	HGNC	ENSG00000089597	28	0	0.00	33	6	15.38	-	-	-
GCC1	0	genome.wustl.edu	37	7	127222558	127222558	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	7	127222558	127222558	G	A	SNP	GCC1	ENST00000321407	human	ensembl	69_37n	-1	known	missense	c.1838	p.S613F	0.128	NULL	pfam_GRIP,superfamily_ARM-type_fold,smart_GRIP,pfscan_GRIP	-	no_errors	GCC1	HGNC	ENSG00000179562	29	0	0.00	60	19	24.05	-	-	-
GJA5	0	genome.wustl.edu	37	1	147230581	147230581	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	147230581	147230581	C	T	SNP	GJA5	ENST00000271348	human	ensembl	69_37n	-1	known	missense	c.766	p.G256S	0.004	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin40	-	no_errors	GJA5	HGNC	ENSG00000143140	56	0	0.00	167	27	13.92	-	-	-
GPR142	0	genome.wustl.edu	37	17	72368470	72368470	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	72368470	72368470	G	T	SNP	GPR142	ENST00000335666	human	ensembl	69_37n	+1	known	missense	c.1120	p.V374F	0.068	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR142	HGNC	ENSG00000257008	31	0	0.00	41	7	14.58	-	-	-
GPRIN2	0	genome.wustl.edu	37	10	46998995	46998995	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	46998995	46998995	C	G	SNP	GPRIN2	ENST00000374314	human	ensembl	69_37n	+1	known	missense	c.115	p.L39V	0.989	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175	8	0	0.00	8	4	33.33	-	-	-
GPRIN2	0	genome.wustl.edu	37	10	46999030	46999030	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	46999030	46999030	C	T	SNP	GPRIN2	ENST00000374314	human	ensembl	69_37n	+1	known	silent	c.150	p.A50	0.872	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175	8	0	0.00	10	4	28.57	-	-	-
HCFC1	0	genome.wustl.edu	37	X	153225483	153225483	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	X	153225483	153225483	G	T	SNP	HCFC1	ENST00000310441	human	ensembl	69_37n	-1	known	missense	c.1214	p.T405K	1.000	smart_Fibronectin_type3	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	73	0	0.00	15	29	65.91	-	-	-
HCN3	0	genome.wustl.edu	37	1	155255534	155255534	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	155255534	155255534	G	C	SNP	HCN3	ENST00000368358	human	ensembl	69_37n	+1	known	missense	c.1256	p.C419S	1.000	superfamily_cNMP-bd-like	pfam_Ion_trans_N,pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN3	HGNC	ENSG00000143630	17	0	0.00	33	9	21.43	-	-	-
HSPA12A	0	genome.wustl.edu	37	10	118439100	118439100	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	118439100	118439100	C	T	SNP	HSPA12A	ENST00000369209	human	ensembl	69_37n	-1	known	silent	c.1200	p.P400	0.001	NULL	NULL	-	no_errors	HSPA12A	HGNC	ENSG00000165868	61	0	0.00	35	41	53.95	-	-	-
IDE	0	genome.wustl.edu	37	10	94274755	94274755	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	94274755	94274755	C	G	SNP	IDE	ENST00000265986	human	ensembl	69_37n	-1	known	missense	c.706	p.D236H	1.000	superfamily_Metalloenz_metal-bd	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_metal-bd	-	no_errors	IDE	HGNC	ENSG00000119912	75	0	0.00	45	40	47.06	-	-	-
IDS	0	genome.wustl.edu	37	X	148568514	148568514	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	X	148568514	148568514	G	A	SNP	IDS	ENST00000340855	human	ensembl	69_37n	-1	known	silent	c.1122	p.G374	0.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	IDS	HGNC	ENSG00000010404	31	0	0.00	8	19	70.37	-	-	-
IFI30	0	genome.wustl.edu	37	19	18286477	18286477	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	18286477	18286477	G	C	SNP	IFI30	ENST00000407280	human	ensembl	69_37n	+1	known	missense	c.453	p.E151D	0.002	pfam_Interferon-induced_GILT	pfam_Interferon-induced_GILT	-	no_errors	IFI30	HGNC	ENSG00000216490	24	0	0.00	21	15	40.54	-	-	-
IGKV1D-42	0	genome.wustl.edu	37	2	90229346	90229346	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	90229346	90229346	G	C	SNP	IGKV1D-42	ENST00000390278	human	ensembl	69_37n	+1	known	missense	c.166	p.A56P	0.060	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGKV1D-42	HGNC	ENSG00000211633	63	0	0.00	46	26	36.11	-	-	-
IGSF8	0	genome.wustl.edu	37	1	160063683	160063683	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	160063683	160063683	C	G	SNP	IGSF8	ENST00000314485	human	ensembl	69_37n	-1	known	missense	c.721	p.G241R	0.990	smart_Ig_sub	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	IGSF8	HGNC	ENSG00000162729	30	0	0.00	31	7	18.42	-	-	-
IL27	0	genome.wustl.edu	37	16	28515309	28515309	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	16	28515309	28515309	G	T	SNP	IL27	ENST00000356897	human	ensembl	69_37n	-1	known	missense	c.94	p.P32T	0.664	NULL	superfamily_4_helix_cytokine-like_core	-	no_errors	IL27	HGNC	ENSG00000197272	24	0	0.00	10	11	52.38	-	-	-
ITIH1	0	genome.wustl.edu	37	3	52822258	52822258	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	52822258	52822258	C	A	SNP	ITIH1	ENST00000273283	human	ensembl	69_37n	+1	known	missense	c.2016	p.D672E	0.973	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,superfamily_PsdUridine_synth_cat_dom,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH1	HGNC	ENSG00000055957	59	0	0.00	45	30	40.00	-	-	-
ITIH5	0	genome.wustl.edu	37	10	7618855	7618855	+	Silent	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	7618855	7618855	G	T	SNP	ITIH5	ENST00000256861	human	ensembl	69_37n	-1	known	silent	c.1539	p.I513	0.892	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH5	HGNC	ENSG00000123243	51	0	0.00	32	26	44.83	-	-	-
ITPR2	0	genome.wustl.edu	37	12	26877590	26877590	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	26877590	26877590	T	A	SNP	ITPR2	ENST00000381340	human	ensembl	69_37n	-1	known	missense	c.365	p.Q122L	1.000	pfam_Ins145_P3_rcpt,superfamily_MIR,smart_MIR_motif,pfscan_MIR_motif	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	169	0	0.00	48	75	60.98	-	-	-
JAKMIP1	0	genome.wustl.edu	37	4	6055709	6055709	+	Missense_Mutation	SNP	A	A	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	4	6055709	6055709	A	C	SNP	JAKMIP1	ENST00000282924	human	ensembl	69_37n	-1	known	missense	c.1874	p.F625C	1.000	NULL	NULL	-	no_errors	JAKMIP1	HGNC	ENSG00000152969	103	0	0.00	49	37	43.02	-	-	-
KCNQ3	0	genome.wustl.edu	37	8	133182580	133182580	+	Splice_Site	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	8	133182580	133182580	C	A	SNP	KCNQ3	ENST00000388996	human	ensembl	69_37n	-1	known	splice_site	c.1235+1	e8+1	1.000	-	-	-	no_errors	KCNQ3	HGNC	ENSG00000184156	19	0	0.00	26	11	29.73	-	-	-
KCNV1	0	genome.wustl.edu	37	8	110980364	110980364	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	8	110980364	110980364	C	T	SNP	KCNV1	ENST00000297404	human	ensembl	69_37n	-1	known	missense	c.1456	p.E486K	1.000	NULL	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv8,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv4	-	no_errors	KCNV1	HGNC	ENSG00000164794	59	0	0.00	123	25	16.89	-	-	-
KIAA0368	0	genome.wustl.edu	37	9	114176865	114176865	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	9	114176865	114176865	C	A	SNP	KIAA0368	ENST00000259335	human	ensembl	69_37n	-1	known	missense	c.2365	p.A789S	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA0368	HGNC	ENSG00000136813	39	0	0.00	22	15	40.54	-	-	-
KIAA0907	0	genome.wustl.edu	37	1	155899583	155899583	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	155899583	155899583	G	C	SNP	KIAA0907	ENST00000368321	human	ensembl	69_37n	-1	known	missense	c.304	p.L102V	1.000	NULL	NULL	-	no_errors	KIAA0907	HGNC	ENSG00000132680	101	0	0.00	118	23	16.31	-	-	-
KIF26B	0	genome.wustl.edu	37	1	245850803	245850803	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	245850803	245850803	C	T	SNP	KIF26B	ENST00000407071	human	ensembl	69_37n	+1	known	silent	c.4518	p.F1506	0.521	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849	18	0	0.00	31	12	27.91	-	-	-
LAMC1	0	genome.wustl.edu	37	1	183083678	183083678	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	183083678	183083678	A	G	SNP	LAMC1	ENST00000258341	human	ensembl	69_37n	+1	known	missense	c.1034	p.N345S	1.000	pfam_EGF_laminin,smart_EGF-like,smart_EGF_laminin	pfam_Laminin_N,pfam_EGF_laminin,pfam_Laminin_B_type_IV,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC1	HGNC	ENSG00000135862	46	0	0.00	37	25	40.32	-	-	-
LBX2	0	genome.wustl.edu	37	2	74725096	74725096	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	74725096	74725096	G	A	SNP	LBX2	ENST00000377566	human	ensembl	69_37n	-1	known	silent	c.555	p.S185	0.007	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	LBX2	HGNC	ENSG00000179528	23	0	0.00	25	6	19.35	-	-	-
LHCGR	0	genome.wustl.edu	37	2	48915906	48915906	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	48915906	48915906	C	G	SNP	LHCGR	ENST00000294954	human	ensembl	69_37n	-1	known	missense	c.1030	p.A344P	1.000	prints_LSH_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_LSH_rcpt,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_TSH_rcpt	-	no_errors	LHCGR	HGNC	ENSG00000138039	72	0	0.00	45	48	51.61	-	-	-
LILRA2	0	genome.wustl.edu	37	19	55087518	55087518	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	55087518	55087518	C	T	SNP	LILRA2	ENST00000251377	human	ensembl	69_37n	+1	known	silent	c.1197	p.L399	0.000	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like	-	no_errors	LILRA2	HGNC	ENSG00000239998	50	0	0.00	28	30	51.72	-	-	-
LINGO2	0	genome.wustl.edu	37	9	27950343	27950343	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	9	27950343	27950343	G	A	SNP	LINGO2	ENST00000308675	human	ensembl	69_37n	-1	known	silent	c.327	p.S109	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LINGO2	HGNC	ENSG00000174482	68	0	0.00	38	31	44.93	-	-	-
LRRC32	0	genome.wustl.edu	37	11	76370691	76370691	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	76370691	76370691	C	G	SNP	LRRC32	ENST00000260061	human	ensembl	69_37n	-1	known	missense	c.1946	p.C649S	0.918	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC32	HGNC	ENSG00000137507	67	0	0.00	30	21	40.38	-	-	-
LRRC37A3	0	genome.wustl.edu	37	17	62865212	62865212	+	Splice_Site	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	62865212	62865212	C	T	SNP	LRRC37A3	ENST00000319651	human	ensembl	69_37n	-1	known	splice_site	c.2978+1	e6+1	1.000	-	-	-	no_errors	LRRC37A3	HGNC	ENSG00000176809	15	0	0.00	1	14	93.33	-	-	-
LRRK1	0	genome.wustl.edu	37	15	101555536	101555536	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	15	101555536	101555536	A	G	SNP	LRRK1	ENST00000388948	human	ensembl	69_37n	+1	known	missense	c.1538	p.E513G	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	57	0	0.00	41	11	21.15	-	-	-
LSR	0	genome.wustl.edu	37	19	35758116	35758116	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	35758116	35758116	C	G	SNP	LSR	ENST00000361790	human	ensembl	69_37n	+1	known	missense	c.1393	p.P465A	0.163	NULL	pfam_LISCH7,smart_Ig_sub,pfscan_Ig-like	-	no_errors	LSR	HGNC	ENSG00000105699	13	0	0.00	10	11	52.38	-	-	-
LYST	0	genome.wustl.edu	37	1	235860498	235860498	+	Silent	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	235860498	235860498	G	T	SNP	LYST	ENST00000389793	human	ensembl	69_37n	-1	known	silent	c.10449	p.V3483	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	56	0	0.00	67	14	17.07	-	-	-
LZTFL1	0	genome.wustl.edu	37	3	45872443	45872443	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	45872443	45872443	C	G	SNP	LZTFL1	ENST00000296135	human	ensembl	69_37n	-1	known	missense	c.562	p.A188P	0.108	NULL	NULL	-	no_errors	LZTFL1	HGNC	ENSG00000163818	151	0	0.00	31	95	74.80	-	-	-
MACF1	0	genome.wustl.edu	37	1	39851426	39851426	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	39851426	39851426	G	A	SNP	MACF1	ENST00000372925	human	ensembl	69_37n	+1	novel	missense	c.5320	p.G1774R	1.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_GAS2_dom,superfamily_GAS2_dom,smart_Spectrin/alpha-actinin,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_EF_HAND_2	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MACF1	HGNC	ENSG00000127603	31	0	0.00	35	9	20.45	-	-	-
MAN2B1	0	genome.wustl.edu	37	19	12760800	12760800	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	12760800	12760800	G	T	SNP	MAN2B1	ENST00000456935	human	ensembl	69_37n	-1	known	missense	c.2194	p.R732S	0.997	pfam_Glyco_hydro_38_C,superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_core,pfam_Glyco_hydro_38_cen_dom,superfamily_Glyco_hydro-type_carb-bd,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B1	HGNC	ENSG00000104774	55	0	0.00	51	35	40.70	-	-	-
MAPKAP1	0	genome.wustl.edu	37	9	128246850	128246850	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	9	128246850	128246850	T	C	SNP	MAPKAP1	ENST00000265960	human	ensembl	69_37n	-1	known	missense	c.1079	p.D360G	1.000	pfam_SIN1	pfam_SIN1	-	no_errors	MAPKAP1	HGNC	ENSG00000119487	68	0	0.00	29	39	57.35	-	-	-
MDGA1	0	genome.wustl.edu	37	6	37620061	37620061	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	37620061	37620061	G	A	SNP	MDGA1	ENST00000297153	human	ensembl	69_37n	-1	known	silent	c.1038	p.N346	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like	-	no_errors	MDGA1	HGNC	ENSG00000112139	16	0	0.00	12	13	52.00	-	-	-
MECOM	0	genome.wustl.edu	37	3	168834507	168834507	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	168834507	168834507	A	G	SNP	MECOM	ENST00000494292	human	ensembl	69_37n	-1	known	missense	c.1153	p.Y385H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	MECOM	HGNC	ENSG00000085276	175	0	0.00	139	102	42.32	-	-	-
MFI2	0	genome.wustl.edu	37	3	196744075	196744075	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	196744075	196744075	C	T	SNP	MFI2	ENST00000296350	human	ensembl	69_37n	-1	known	missense	c.799	p.E267K	0.860	pfam_Peptidase_S60,smart_Peptidase_S60,pirsf_Transferrin,prints_Peptidase_S60	pfam_Peptidase_S60,smart_Peptidase_S60,pirsf_Transferrin,prints_Peptidase_S60	-	no_errors	MFI2	HGNC	ENSG00000163975	11	0	0.00	7	8	53.33	-	-	-
MICALL1	0	genome.wustl.edu	37	22	38308003	38308003	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	22	38308003	38308003	G	C	SNP	MICALL1	ENST00000215957	human	ensembl	69_37n	+1	known	missense	c.191	p.R64P	0.984	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL1	HGNC	ENSG00000100139	89	0	0.00	56	13	18.84	-	-	-
MS4A7	0	genome.wustl.edu	37	11	60160252	60160252	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	60160252	60160252	A	T	SNP	MS4A7	ENST00000300184	human	ensembl	69_37n	+1	known	missense	c.641	p.N214I	0.000	NULL	pfam_CD20-like	-	no_errors	MS4A7	HGNC	ENSG00000166927	89	0	0.00	87	20	18.52	-	-	-
MUC16	0	genome.wustl.edu	37	19	8974096	8974096	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	8974096	8974096	G	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.42575	p.A14192E	0.006	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	78	0	0.00	93	18	16.22	-	-	-
MUC16	0	genome.wustl.edu	37	19	9004897	9004897	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	9004897	9004897	C	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	silent	c.39921	p.E13307	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	62	0	0.00	80	25	23.81	-	-	-
MUC17	0	genome.wustl.edu	37	7	100696289	100696289	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	7	100696289	100696289	T	A	SNP	MUC17	ENST00000306151	human	ensembl	69_37n	+1	known	missense	c.13126	p.W4376R	1.000	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	MUC17	HGNC	ENSG00000169876	32	0	0.00	24	21	46.67	-	-	-
MYH10	0	genome.wustl.edu	37	17	8390870	8390870	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	8390870	8390870	G	A	SNP	MYH10	ENST00000396239	human	ensembl	69_37n	-1	known	missense	c.4897	p.R1633W	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026	74	0	0.00	44	20	31.25	-	-	-
NAV3	0	genome.wustl.edu	37	12	78591132	78591132	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	78591132	78591132	T	C	SNP	NAV3	ENST00000397909	human	ensembl	69_37n	+1	known	missense	c.6397	p.S2133P	1.000	pfam_ATPase_AAA_core,smart_AAA+_ATPase	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	93	0	0.00	22	37	62.71	-	-	-
NFKB1	0	genome.wustl.edu	37	4	103500040	103500040	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	4	103500040	103500040	C	T	SNP	NFKB1	ENST00000226574	human	ensembl	69_37n	+1	known	missense	c.574	p.R192W	0.071	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like,smart_IPT_TIG_rcpt,smart_Ankyrin_rpt,smart_Death,prints_NF_Rel_dor,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD	-	no_errors	NFKB1	HGNC	ENSG00000109320	55	0	0.00	17	44	72.13	-	-	-
NGF	0	genome.wustl.edu	37	1	115829056	115829056	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	115829056	115829056	G	A	SNP	NGF	ENST00000369512	human	ensembl	69_37n	-1	known	missense	c.361	p.R121W	1.000	pirsf_Nerve_growth_factor-like	pirsf_Nerve_growth_factor-like,pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel,prints_Nerve_growth_factor_bsu_mml,prints_Nerve_growth_factor_bsu,pfscan_Nerve_growth_factor-rel	-	no_errors	NGF	HGNC	ENSG00000134259	40	0	0.00	34	10	22.73	-	-	-
NLRP13	0	genome.wustl.edu	37	19	56423120	56423120	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	56423120	56423120	C	G	SNP	NLRP13	ENST00000342929	human	ensembl	69_37n	-1	known	missense	c.2063	p.R688T	0.615	NULL	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP13	HGNC	ENSG00000173572	34	0	0.00	10	12	54.55	-	-	-
NLRP14	0	genome.wustl.edu	37	11	7063859	7063859	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	7063859	7063859	C	G	SNP	NLRP14	ENST00000299481	human	ensembl	69_37n	+1	known	missense	c.602	p.A201G	1.000	pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP14	HGNC	ENSG00000158077	60	0	0.00	28	7	20.00	-	-	-
NSD1	0	genome.wustl.edu	37	5	176562116	176562116	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	5	176562116	176562116	C	T	SNP	NSD1	ENST00000439151	human	ensembl	69_37n	+1	known	silent	c.12	p.T4	1.000	NULL	pfam_PWWP,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	26	0	0.00	26	11	29.73	-	-	-
OR13G1	0	genome.wustl.edu	37	1	247835593	247835593	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	247835593	247835593	G	T	SNP	OR13G1	ENST00000359688	human	ensembl	69_37n	-1	known	missense	c.751	p.P251T	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR13G1	HGNC	ENSG00000197437	54	0	0.00	65	19	22.35	-	-	-
OR5D14	0	genome.wustl.edu	37	11	55563515	55563515	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	55563515	55563515	C	T	SNP	OR5D14	ENST00000335605	human	ensembl	69_37n	+1	known	missense	c.484	p.L162F	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113	87	0	0.00	67	21	23.86	-	-	-
OR6C3	0	genome.wustl.edu	37	12	55725942	55725942	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	55725942	55725942	T	A	SNP	OR6C3	ENST00000379667	human	ensembl	69_37n	+1	known	missense	c.458	p.I153N	0.001	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR6C3	HGNC	ENSG00000205329	88	0	0.00	45	21	31.82	-	-	-
ORC2	0	genome.wustl.edu	37	2	201776110	201776110	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	201776110	201776110	C	G	SNP	ORC2	ENST00000234296	human	ensembl	69_37n	-1	known	missense	c.1648	p.G550R	1.000	pfam_ORC2	pfam_ORC2	-	no_errors	ORC2	HGNC	ENSG00000115942	65	0	0.00	45	67	59.82	-	-	-
OSBPL5	0	genome.wustl.edu	37	11	3147733	3147733	+	Silent	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	3147733	3147733	C	A	SNP	OSBPL5	ENST00000263650	human	ensembl	69_37n	-1	known	silent	c.189	p.P63	0.992	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL5	HGNC	ENSG00000021762	28	0	0.00	5	27	84.38	-	-	-
OVGP1	0	genome.wustl.edu	37	1	111966173	111966173	+	Missense_Mutation	SNP	A	A	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	111966173	111966173	A	C	SNP	OVGP1	ENST00000369732	human	ensembl	69_37n	-1	known	missense	c.475	p.L159V	0.963	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	OVGP1	HGNC	ENSG00000085465	30	0	0.00	31	13	29.55	-	-	-
P2RX2	0	genome.wustl.edu	37	12	133198288	133198288	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	133198288	133198288	T	G	SNP	P2RX2	ENST00000343948	human	ensembl	69_37n	+1	known	missense	c.1224	p.C408W	0.672	NULL	pfam_P2X_purnocptor,prints_P2X2_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX2	HGNC	ENSG00000187848	31	0	0.00	28	5	15.15	-	-	-
PAQR8	0	genome.wustl.edu	37	6	52268806	52268806	+	Silent	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	52268806	52268806	C	G	SNP	PAQR8	ENST00000360726	human	ensembl	69_37n	+1	known	silent	c.795	p.P265	0.024	pfam_HlyIII-related	pfam_HlyIII-related,superfamily_C-type_lectin_fold	-	no_errors	PAQR8	HGNC	ENSG00000170915	46	0	0.00	35	34	49.28	-	-	-
PC	0	genome.wustl.edu	37	11	66620009	66620009	+	Missense_Mutation	SNP	A	A	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	11	66620009	66620009	A	C	SNP	PC	ENST00000393958	human	ensembl	69_37n	-1	known	missense	c.1726	p.S576A	1.000	pfam_PYR_CT,pirsf_Pyruv_COase,pfscan_PYR_CT,tigrfam_Pyruv_COase	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_Carboxylase_cons_dom,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_PYR_CT,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,superfamily_PreATP-grasp_fold,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pirsf_Pyruv_COase,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_PYR_CT,pfscan_Biotin_lipoyl,tigrfam_Pyruv_COase	-	no_errors	PC	HGNC	ENSG00000173599	31	0	0.00	20	9	31.03	-	-	-
PCDHGB4	0	genome.wustl.edu	37	5	140769218	140769218	+	Silent	SNP	A	A	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	5	140769218	140769218	A	T	SNP	PCDHGB4	ENST00000519479	human	ensembl	69_37n	+1	known	silent	c.1767	p.V589	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB4	HGNC	ENSG00000253953	15	0	0.00	3	18	85.71	-	-	-
PDXDC1	0	genome.wustl.edu	37	16	15103550	15103550	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	16	15103550	15103550	C	T	SNP	PDXDC1	ENST00000396410	human	ensembl	69_37n	+1	known	silent	c.661	p.L221	0.998	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	PDXDC1	HGNC	ENSG00000179889	116	0	0.00	134	16	10.67	-	-	-
PHACTR3	0	genome.wustl.edu	37	20	58349443	58349443	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	20	58349443	58349443	G	C	SNP	PHACTR3	ENST00000371015	human	ensembl	69_37n	+1	known	missense	c.1072	p.E358Q	0.989	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR3	HGNC	ENSG00000087495	58	0	0.00	76	29	27.62	-	-	-
PHF11	0	genome.wustl.edu	37	13	50098309	50098309	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	13	50098309	50098309	T	G	SNP	PHF11	ENST00000378319	human	ensembl	69_37n	+1	known	missense	c.726	p.H242Q	0.059	NULL	superfamily_Znf_FYVE_PHD,smart_Znf_PHD	-	no_errors	PHF11	HGNC	ENSG00000136147	34	0	0.00	17	15	46.88	-	-	-
PLIN4	0	genome.wustl.edu	37	19	4510826	4510826	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	4510826	4510826	A	T	SNP	PLIN4	ENST00000301286	human	ensembl	69_37n	-1	novel	missense	c.3104	p.L1035H	0.000	NULL	pfam_Perilipin,superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PLIN4	HGNC	ENSG00000167676	57	0	0.00	6	28	80.00	-	-	-
PNPLA8	0	genome.wustl.edu	37	7	108131874	108131874	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	7	108131874	108131874	T	C	SNP	PNPLA8	ENST00000257694	human	ensembl	69_37n	-1	known	missense	c.1663	p.R555G	1.000	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_ARM-type_fold	-	no_errors	PNPLA8	HGNC	ENSG00000135241	88	0	0.00	154	23	12.99	-	-	-
PPRC1	0	genome.wustl.edu	37	10	103909715	103909715	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	103909715	103909715	G	A	SNP	PPRC1	ENST00000278070	human	ensembl	69_37n	+1	known	missense	c.4924	p.V1642I	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPRC1	HGNC	ENSG00000148840	49	0	0.00	36	19	34.55	-	-	-
PRPF4	0	genome.wustl.edu	37	9	116053191	116053191	+	Missense_Mutation	SNP	A	A	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	9	116053191	116053191	A	C	SNP	PRPF4	ENST00000374198	human	ensembl	69_37n	+1	known	missense	c.1270	p.T424P	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_PRP4,superfamily_WD40_repeat_dom,smart_SFM,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PRPF4	HGNC	ENSG00000136875	62	0	0.00	53	32	37.65	-	-	-
PSMA5	0	genome.wustl.edu	37	1	109957929	109957929	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	109957929	109957929	C	T	SNP	PSMA5	ENST00000271308	human	ensembl	69_37n	-1	known	silent	c.153	p.E51	1.000	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA5	HGNC	ENSG00000143106	50	0	0.00	43	22	33.85	-	-	-
PSMD4	0	genome.wustl.edu	37	1	151227268	151227268	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	151227268	151227268	G	C	SNP	PSMD4	ENST00000368884	human	ensembl	69_37n	+1	known	missense	c.10	p.E4Q	1.000	smart_VWF_A	pfam_Ubiquitin-int_motif,pfam_Ssl1-like,smart_VWF_A,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_VWF_A	-	no_errors	PSMD4	HGNC	ENSG00000159352	78	0	0.00	87	123	58.29	-	-	-
PSME3	0	genome.wustl.edu	37	17	40993571	40993571	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	40993571	40993571	C	T	SNP	PSME3	ENST00000293362	human	ensembl	69_37n	+1	known	silent	c.780	p.S260	1.000	pfam_Proteasome_activ_REG_bsu,superfamily_Proteasome_activ_REG_asu/bsu	pfam_Proteasome_activ_REG_bsu,pfam_Proteasome_activ_REG_asu,superfamily_Proteasome_activ_REG_asu/bsu	-	no_errors	PSME3	HGNC	ENSG00000131467	32	0	0.00	27	27	50.00	-	-	-
PTPRN	0	genome.wustl.edu	37	2	220155281	220155281	+	Silent	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	220155281	220155281	C	A	SNP	PTPRN	ENST00000295718	human	ensembl	69_37n	-1	known	silent	c.2847	p.R949	0.998	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN	HGNC	ENSG00000054356	43	0	0.00	5	71	93.42	-	-	-
RAD23A	0	genome.wustl.edu	37	19	13059325	13059325	+	Nonsense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	13059325	13059325	C	G	SNP	RAD23A	ENST00000586534	human	ensembl	69_37n	+1	known	nonsense	c.431	p.S144*	1.000	tigrfam_Rad23	pfam_XPC-bd,pfam_UBA/transl_elong_EF1B_N,pfam_Ubiquitin,pfam_SUMO,superfamily_XPC-bd,superfamily_UBA-like,smart_Ubiquitin,smart_UBA/transl_elong_EF1B_N_euk,smart_STI1_HS-bd,prints_Rad23,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup,tigrfam_Rad23	-	no_errors	RAD23A	HGNC	ENSG00000179262	49	0	0.00	33	30	47.62	-	-	-
RASSF4	0	genome.wustl.edu	37	10	45487443	45487443	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	45487443	45487443	A	T	SNP	RASSF4	ENST00000334940	human	ensembl	69_37n	+1	known	missense	c.925	p.T309S	1.000	pfscan_SARAH	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SARAH	-	no_errors	RASSF4	HGNC	ENSG00000107551	56	0	0.00	25	10	28.57	-	-	-
RBM15B	0	genome.wustl.edu	37	3	51430822	51430824	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	51430822	51430824	CCA	-	DEL	RBM15B	ENST00000323686	human	ensembl	69_37n	+1	novel	in_frame_del	c.1992_1994	p.H668in_frame_del	1.000:1.000:0.998	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	RBM15B	HGNC	ENSG00000179837	13	0	0.00	12	2	14.29	-	-	-
RIMBP2	0	genome.wustl.edu	37	12	130898669	130898669	+	Splice_Site	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	130898669	130898669	C	A	SNP	RIMBP2	ENST00000261655	human	ensembl	69_37n	-1	known	splice_site	c.2652+1	e12+1	1.000	-	-	-	no_errors	RIMBP2	HGNC	ENSG00000060709	20	0	0.00	24	32	57.14	-	-	-
RIN3	0	genome.wustl.edu	37	14	93022208	93022208	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	14	93022208	93022208	C	G	SNP	RIN3	ENST00000216487	human	ensembl	69_37n	+1	known	missense	c.157	p.L53V	1.000	NULL	pfam_VPS9,smart_SH2,smart_VPS9_subgr,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN3	HGNC	ENSG00000100599	48	0	0.00	13	17	56.67	-	-	-
RPA3	0	genome.wustl.edu	37	7	7676652	7676652	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	7	7676652	7676652	T	A	SNP	RPA3	ENST00000223129	human	ensembl	69_37n	-1	known	missense	c.345	p.L115F	0.992	superfamily_NA-bd_OB-fold-like	pfam_Rep_factor-A_3,superfamily_NA-bd_OB-fold-like	-	no_errors	RPA3	HGNC	ENSG00000106399	68	0	0.00	11	31	73.81	-	-	-
RPE65	0	genome.wustl.edu	37	1	68903958	68903958	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	68903958	68903958	C	T	SNP	RPE65	ENST00000262340	human	ensembl	69_37n	-1	known	missense	c.1040	p.R347H	1.000	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	RPE65	HGNC	ENSG00000116745	57	0	0.00	50	22	30.56	-	-	-
RTL1	0	genome.wustl.edu	37	14	101350433	101350433	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	14	101350433	101350433	G	A	SNP	RTL1	ENST00000534062	human	ensembl	69_37n	-1	known	silent	c.693	p.F231	0.192	NULL	pfam_Retrotrans_gag,superfamily_Peptidase_aspartic	-	no_errors	RTL1	HGNC	ENSG00000254656	46	0	0.00	34	14	29.17	-	-	-
RUFY2	0	genome.wustl.edu	37	10	70153888	70153888	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	10	70153888	70153888	T	A	SNP	RUFY2	ENST00000466493	human	ensembl	69_37n	-1	known	missense	c.569	p.E190V	1.000	NULL	pfam_Run,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Run,smart_Znf_FYVE,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	RUFY2	HGNC	ENSG00000204130	65	0	0.00	28	10	26.32	-	-	-
RXFP2	0	genome.wustl.edu	37	13	32340136	32340136	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	13	32340136	32340136	T	G	SNP	RXFP2	ENST00000298386	human	ensembl	69_37n	+1	known	missense	c.469	p.F157V	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_7TM_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_supfam,prints_Relaxin_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Gphrmn_rcpt	-	no_errors	RXFP2	HGNC	ENSG00000133105	48	0	0.00	19	20	51.28	-	-	-
SDCBP2	0	genome.wustl.edu	37	20	1299057	1299057	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	20	1299057	1299057	A	G	SNP	SDCBP2	ENST00000339987	human	ensembl	69_37n	-1	known	missense	c.130	p.Y44H	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SDCBP2	HGNC	ENSG00000125775	38	0	0.00	43	10	18.87	-	-	-
SERHL2	0	genome.wustl.edu	37	22	42962330	42962330	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	22	42962330	42962330	C	A	SNP	SERHL2	ENST00000327678	human	ensembl	69_37n	+1	known	missense	c.634	p.Q212K	0.761	NULL	pfam_AB_hydrolase_1,prints_AB_hydrolase_1	-	no_errors	SERHL2	HGNC	ENSG00000183569	39	0	0.00	9	21	70.00	-	-	-
SERPINE1	0	genome.wustl.edu	37	7	100777023	100777023	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	7	100777023	100777023	C	G	SNP	SERPINE1	ENST00000223095	human	ensembl	69_37n	+1	known	missense	c.748	p.P250A	1.000	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINE1	HGNC	ENSG00000106366	50	0	0.00	41	30	42.25	-	-	-
SI	0	genome.wustl.edu	37	3	164733798	164733798	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	164733798	164733798	T	A	SNP	SI	ENST00000264382	human	ensembl	69_37n	-1	known	missense	c.3830	p.D1277V	0.002	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402	85	0	0.00	75	44	36.36	-	-	-
SIN3B	0	genome.wustl.edu	37	19	16964996	16964996	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	16964996	16964996	C	G	SNP	SIN3B	ENST00000379803	human	ensembl	69_37n	+1	known	missense	c.982	p.L328V	1.000	pfam_PAH,superfamily_PAH	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3B	HGNC	ENSG00000127511	33	0	0.00	34	23	40.35	-	-	-
SLC12A8	0	genome.wustl.edu	37	3	124829135	124829135	+	Silent	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	124829135	124829135	C	G	SNP	SLC12A8	ENST00000423114	human	ensembl	69_37n	-1	known	silent	c.1044	p.S348	0.370	pfam_AA-permease_dom	pfam_AA-permease_dom,superfamily_ABC_transptrTM_dom_typ1	-	no_errors	SLC12A8	HGNC	ENSG00000221955	31	0	0.00	38	19	33.33	-	-	-
SMG1	0	genome.wustl.edu	37	16	18841257	18841257	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	16	18841257	18841257	T	-	DEL	SMG1	ENST00000389467	human	ensembl	69_37n	-1	known	frame_shift_del	c.9124	p.T3042fs	1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106	36	0	0.00	17	13	43.33	-	-	-
SP100	0	genome.wustl.edu	37	2	231334496	231334496	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	231334496	231334496	A	-	DEL	SP100	ENST00000341950	human	ensembl	69_37n	+1	known	frame_shift_del	c.1350	p.K453fs	0.007	NULL	pfam_Sp100	-	no_errors	SP100	HGNC	ENSG00000067066	8	0	0.00	12	2	14.29	-	-	-
SSC5D	0	genome.wustl.edu	37	19	56029455	56029455	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	56029455	56029455	C	A	SNP	SSC5D	ENST00000389623	human	ensembl	69_37n	+1	known	missense	c.3812	p.P1271H	0.001	NULL	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_Srcr_rcpt,pfscan_Srcr_rcpt	-	no_errors	SSC5D	HGNC	ENSG00000179954	191	0	0.00	141	34	19.43	-	-	-
STK31	0	genome.wustl.edu	37	7	23809335	23809335	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	7	23809335	23809335	C	G	SNP	STK31	ENST00000355870	human	ensembl	69_37n	+1	known	missense	c.1673	p.T558S	0.998	NULL	pfam_Tudor,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tudor,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Tudor,pfscan_Prot_kinase_cat_dom	-	no_errors	STK31	HGNC	ENSG00000196335	63	0	0.00	10	37	78.72	-	-	-
STXBP5	0	genome.wustl.edu	37	6	147636833	147636833	+	Silent	SNP	A	A	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	147636833	147636833	A	C	SNP	STXBP5	ENST00000321680	human	ensembl	69_37n	+1	known	silent	c.1585	p.R529	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5	HGNC	ENSG00000164506	64	0	0.00	25	14	35.90	-	-	-
SYN2	0	genome.wustl.edu	37	3	12203643	12203643	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	12203643	12203643	C	T	SNP	SYN2	ENST00000426379	human	ensembl	69_37n	+1	known	missense	c.995	p.T332I	1.000	NULL	NULL	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SYN2	HGNC	ENSG00000157152	35	0	0.00	53	7	11.67	-	-	-
SYNE2	0	genome.wustl.edu	37	14	64608066	64608066	+	Nonsense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	14	64608066	64608066	C	G	SNP	SYNE2	ENST00000358025	human	ensembl	69_37n	+1	known	nonsense	c.14984	p.S4995*	1.000	smart_Spectrin/alpha-actinin	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	35	0	0.00	18	20	52.63	-	-	-
SYNPO2	0	genome.wustl.edu	37	4	119951302	119951302	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	4	119951302	119951302	C	A	SNP	SYNPO2	ENST00000307142	human	ensembl	69_37n	+1	known	missense	c.1372	p.Q458K	0.010	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2	HGNC	ENSG00000172403	69	0	0.00	100	15	13.04	-	-	-
SYNPR	0	genome.wustl.edu	37	3	63466633	63466633	+	Splice_Site	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	63466633	63466633	G	A	SNP	SYNPR	ENST00000478300	human	ensembl	69_37n	+1	known	splice_site	c.209+1	e3+1	1.000	-	-	-	no_errors	SYNPR	HGNC	ENSG00000163630	51	0	0.00	20	13	39.39	-	-	-
TBC1D13	0	genome.wustl.edu	37	9	131553046	131553046	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	9	131553046	131553046	T	C	SNP	TBC1D13	ENST00000372648	human	ensembl	69_37n	+1	known	missense	c.130	p.C44R	1.000	superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D13	HGNC	ENSG00000107021	37	0	0.00	9	34	79.07	-	-	-
TBC1D20	0	genome.wustl.edu	37	20	420924	420924	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	20	420924	420924	G	T	SNP	TBC1D20	ENST00000354200	human	ensembl	69_37n	-1	known	missense	c.736	p.H246N	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D20	HGNC	ENSG00000125875	40	0	0.00	40	7	14.89	-	-	-
TCEB1	0	genome.wustl.edu	37	8	74859004	74859004	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	8	74859004	74859004	G	A	SNP	TCEB1	ENST00000520242	human	ensembl	69_37n	-1	known	missense	c.200	p.S67L	1.000	pfam_Skp1_comp_POZ,superfamily_BTB/POZ_fold,smart_Skp1_comp	pfam_Skp1_comp_POZ,superfamily_BTB/POZ_fold,smart_Skp1_comp	-	no_errors	TCEB1	HGNC	ENSG00000154582	64	0	0.00	50	105	67.74	-	-	-
TCP10	0	genome.wustl.edu	37	6	167789534	167789534	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	167789534	167789534	T	A	SNP	TCP10	ENST00000397829	human	ensembl	69_37n	-1	known	missense	c.608	p.N203I	0.000	NULL	NULL	-	no_errors	TCP10	HGNC	ENSG00000203690	57	0	0.00	5	28	84.85	-	-	-
TGM2	0	genome.wustl.edu	37	20	36759526	36759526	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	20	36759526	36759526	C	A	SNP	TGM2	ENST00000361475	human	ensembl	69_37n	-1	known	missense	c.1882	p.G628C	0.997	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM2	HGNC	ENSG00000198959	40	0	0.00	40	11	21.57	-	-	-
THBS1	0	genome.wustl.edu	37	15	39884927	39884927	+	Silent	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	15	39884927	39884927	T	C	SNP	THBS1	ENST00000260356	human	ensembl	69_37n	+1	known	silent	c.2691	p.D897	0.981	pfam_Thrombospondin_3-like_rpt	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801	55	0	0.00	18	23	56.10	-	-	-
TM2D2	0	genome.wustl.edu	37	8	38852899	38852899	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	8	38852899	38852899	C	G	SNP	TM2D2	ENST00000456397	human	ensembl	69_37n	-1	known	missense	c.253	p.D85H	1.000	NULL	pfam_TM2	-	no_errors	TM2D2	HGNC	ENSG00000169490	68	0	0.00	104	13	11.11	-	-	-
TMEM145	0	genome.wustl.edu	37	19	42821924	42821924	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	19	42821924	42821924	C	G	SNP	TMEM145	ENST00000301204	human	ensembl	69_37n	+1	known	missense	c.964	p.L322V	1.000	pfam_Rhodopsin-like_GPCR_TM_domain	pfam_Rhodopsin-like_GPCR_TM_domain	-	no_errors	TMEM145	HGNC	ENSG00000167619	67	0	0.00	68	50	42.37	-	-	-
TMEM151B	0	genome.wustl.edu	37	6	44241130	44241130	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	44241130	44241130	C	T	SNP	TMEM151B	ENST00000451188	human	ensembl	69_37n	+1	known	missense	c.463	p.R155C	1.000	NULL	NULL	-	no_errors	TMEM151B	HGNC	ENSG00000178233	25	0	0.00	35	7	16.67	-	-	-
TNIK	0	genome.wustl.edu	37	3	170875269	170875269	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	170875269	170875269	G	C	SNP	TNIK	ENST00000436636	human	ensembl	69_37n	-1	known	missense	c.1201	p.Q401E	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_cat_dom	-	no_errors	TNIK	HGNC	ENSG00000154310	13	0	0.00	23	15	39.47	-	-	-
TP53	0	genome.wustl.edu	37	17	7579359	7579360	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	7579359	7579360	-	GA	INS	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_ins	c.328_327	p.R109fs	0.028:0.864	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	23	0	0.00	14	22	61.11	-	-	-
TTC24	0	genome.wustl.edu	37	1	156551191	156551191	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	1	156551191	156551191	G	A	SNP	TTC24	ENST00000368236	human	ensembl	69_37n	+1	known	missense	c.35	p.R12K	0.193	NULL	pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC24	HGNC	ENSG00000187862	36	0	0.00	26	17	39.53	-	-	-
TTN	0	genome.wustl.edu	37	2	179614480	179614480	+	Nonsense_Mutation	SNP	A	A	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	179614480	179614480	A	T	SNP	TTN	ENST00000360870	human	ensembl	69_37n	-1	known	nonsense	c.12647	p.L4216*	0.935	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	29	0	0.00	5	7	58.33	-	-	-
UBE2R2	0	genome.wustl.edu	37	9	33900241	33900241	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	9	33900241	33900241	G	A	SNP	UBE2R2	ENST00000263228	human	ensembl	69_37n	+1	known	missense	c.334	p.E112K	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2R2	HGNC	ENSG00000107341	82	0	0.00	52	62	53.91	-	-	-
UBE3D	0	genome.wustl.edu	37	6	83728709	83728709	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	83728709	83728709	G	A	SNP	UBE3D	ENST00000369747	human	ensembl	69_37n	-1	known	silent	c.993	p.I331	1.000	pfam_UBQ-conj_enz_E2-bd_prot	pfam_UBQ-conj_enz_E2-bd_prot	-	no_errors	UBE3D	HGNC	ENSG00000118420	80	0	0.00	60	28	31.82	-	-	-
UGT1A4	0	genome.wustl.edu	37	2	234627956	234627956	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	234627956	234627956	T	C	SNP	UGT1A4	ENST00000373409	human	ensembl	69_37n	+1	known	missense	c.490	p.Y164H	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A4	HGNC	ENSG00000244474	97	0	0.00	17	126	88.11	-	-	-
UNC45A	0	genome.wustl.edu	37	15	91493734	91493734	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	15	91493734	91493734	A	G	SNP	UNC45A	ENST00000418476	human	ensembl	69_37n	+1	known	missense	c.2192	p.Y731C	1.000	superfamily_ARM-type_fold	pfam_UNC-45/Ring3,superfamily_ARM-type_fold,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	UNC45A	HGNC	ENSG00000140553	26	0	0.00	5	22	81.48	-	-	-
USP34	0	genome.wustl.edu	37	2	61515816	61515816	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	2	61515816	61515816	G	A	SNP	USP34	ENST00000398571	human	ensembl	69_37n	-1	known	missense	c.4745	p.T1582I	1.000	NULL	pfam_Peptidase_C19,superfamily_ARM-type_fold,pfscan_Peptidase_C19	-	no_errors	USP34	HGNC	ENSG00000115464	54	0	0.00	52	20	27.78	-	-	-
VGLL2	0	genome.wustl.edu	37	6	117589357	117589357	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	117589357	117589357	T	C	SNP	VGLL2	ENST00000326274	human	ensembl	69_37n	+1	known	missense	c.94	p.Y32H	1.000	NULL	pfam_Vg_Tdu	-	no_errors	VGLL2	HGNC	ENSG00000170162	17	0	0.00	2	11	84.62	-	-	-
VTI1B	0	genome.wustl.edu	37	14	68126640	68126640	+	Splice_Site	SNP	C	C	G			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	14	68126640	68126640	C	G	SNP	VTI1B	ENST00000554659	human	ensembl	69_37n	-1	known	splice_site	c.175-1	e3-1	1.000	-	-	-	no_errors	VTI1B	HGNC	ENSG00000100568	41	0	0.00	26	14	35.00	-	-	-
VWA5B2	0	genome.wustl.edu	37	3	183959139	183959139	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	3	183959139	183959139	G	T	SNP	VWA5B2	ENST00000426955	human	ensembl	69_37n	+1	known	missense	c.3127	p.D1043Y	0.003	NULL	NULL	-	no_errors	VWA5B2	HGNC	ENSG00000145198	15	0	0.00	29	12	29.27	-	-	-
WFIKKN2	0	genome.wustl.edu	37	17	48917309	48917309	+	Silent	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	48917309	48917309	G	A	SNP	WFIKKN2	ENST00000311378	human	ensembl	69_37n	+1	known	silent	c.660	p.S220	0.003	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Netrin_module_non-TIMP,pfam_Whey_acidic_protein_4-diS_core,pfam_Kazal-type_dom,pfam_Ig_V-set,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_Whey_acidic_protein_4-diS_core,smart_Whey_acidic_protein_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN2	HGNC	ENSG00000173714	37	0	0.00	71	23	24.47	-	-	-
WRAP53	0	genome.wustl.edu	37	17	7592245	7592245	+	Silent	SNP	C	C	T			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	17	7592245	7592245	C	T	SNP	WRAP53	ENST00000316024	human	ensembl	69_37n	+1	known	silent	c.279	p.I93	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WRAP53	HGNC	ENSG00000141499	27	0	0.00	33	7	17.50	-	-	-
XPO5	0	genome.wustl.edu	37	6	43535019	43535020	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	43535019	43535020	-	C	INS	XPO5	ENST00000265351	human	ensembl	69_37n	-1	known	frame_shift_ins	c.721_720	p.S240fs	0.998:1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPO5	HGNC	ENSG00000124571	49	0	0.00	35	16	31.37	-	-	-
XPO5	0	genome.wustl.edu	37	6	43535023	43535025	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	6	43535023	43535025	AGA	-	DEL	XPO5	ENST00000265351	human	ensembl	69_37n	-1	known	in_frame_del	c.717_715	p.S239in_frame_del	0.304:0.952:0.935	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPO5	HGNC	ENSG00000124571	47	0	0.00	34	16	32.00	-	-	-
ZNF280B	0	genome.wustl.edu	37	22	22842463	22842463	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	22	22842463	22842463	G	A	SNP	ZNF280B	ENST00000360412	human	ensembl	69_37n	-1	known	missense	c.1261	p.H421Y	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280B	HGNC	ENSG00000198477	69	0	0.00	26	22	45.83	-	-	-
ZNF608	0	genome.wustl.edu	37	5	124080554	124080556	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	5	124080554	124080556	CTT	-	DEL	ZNF608	ENST00000306315	human	ensembl	69_37n	-1	known	in_frame_del	c.129_127	p.K43in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors	ZNF608	HGNC	ENSG00000168916	73	0	0.00	23	75	72.82	-	-	-
ZNF705A	0	genome.wustl.edu	37	12	8328517	8328517	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A256-01A-11D-A167-09	TCGA-AR-A256-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ea43434b-197e-48ac-ae2e-46bc7f3776de	09f34836-fc9a-4ff4-a0c9-fd93259e32f3	12	8328517	8328517	C	A	SNP	ZNF705A	ENST00000359286	human	ensembl	69_37n	+1	known	missense	c.297	p.D99E	0.028	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF705A	HGNC	ENSG00000196946	176	0	0.00	111	40	26.49	-	-	-
