Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA13	0	genome.wustl.edu	37	7	48567933	48567933	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	7	48567933	48567933	T	A	SNP	ABCA13	ENST00000453246	human	ensembl	69_37n	+1	known	missense	c.3142	p.S1048T	0.166	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ABCA13	HGNC	ENSG00000179869	217	0	0.00	315	36	10.23	-	-	-
ABCB1	0	genome.wustl.edu	37	7	87175263	87175263	+	Silent	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	7	87175263	87175263	G	A	SNP	ABCB1	ENST00000265724	human	ensembl	69_37n	-1	known	silent	c.1803	p.F601	1.000	smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB1	HGNC	ENSG00000085563	136	0	0.00	174	32	15.53	-	-	-
ANKRD11	0	genome.wustl.edu	37	16	89347633	89347633	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	16	89347633	89347633	C	A	SNP	ANKRD11	ENST00000301030	human	ensembl	69_37n	-1	known	nonsense	c.5317	p.E1773*	0.999	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	95	0	0.00	34	9	20.93	-	-	-
ANKRD32	0	genome.wustl.edu	37	5	94014648	94014648	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	5	94014648	94014648	C	G	SNP	ANKRD32	ENST00000265140	human	ensembl	69_37n	+1	known	missense	c.1963	p.L655V	0.994	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_BRCT_dom,smart_BRCT_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD32	HGNC	ENSG00000133302	378	0	0.00	228	67	22.64	-	-	-
ATG9B	0	genome.wustl.edu	37	7	150718275	150718276	+	RNA	INS	-	-	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	7	150718275	150718276	-	G	INS	ATG9B	ENST00000377974	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ATG9B	HGNC	ENSG00000181652	50	0	0.00	24	3	11.11	-	-	-
ATP1A1	0	genome.wustl.edu	37	1	116936238	116936238	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	1	116936238	116936238	G	A	SNP	ATP1A1	ENST00000295598	human	ensembl	69_37n	+1	known	missense	c.1553	p.C518Y	1.000	pfam_Dehalogen-like_hydro,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,prints_ATPase_P-typ_cation-exchng_asu,tigrfam_ATPase_P-typ_cation-ex_asu_euk	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP1A1	HGNC	ENSG00000163399	290	0	0.00	228	86	27.39	-	-	-
BMP15	0	genome.wustl.edu	37	X	50654112	50654112	+	Splice_Site	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	X	50654112	50654112	G	A	SNP	BMP15	ENST00000252677	human	ensembl	69_37n	+1	known	splice_site	c.328+1	e1+1	1.000	-	-	-	no_errors	BMP15	HGNC	ENSG00000130385	9	0	0.00	9	4	30.77	-	-	-
C14orf43	0	genome.wustl.edu	37	14	74205696	74205696	+	Frame_Shift_Del	DEL	T	T	-			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	14	74205696	74205696	T	-	DEL	C14orf43	ENST00000286523	human	ensembl	69_37n	-1	known	frame_shift_del	c.1016	p.Q339fs	1.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	C14orf43	HGNC	ENSG00000156030	34	0	0.00	30	6	14.63	-	-	-
C5orf52	0	genome.wustl.edu	37	5	157102201	157102202	+	In_Frame_Ins	INS	-	-	CTT			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	5	157102201	157102202	-	CTT	INS	C5orf52	ENST00000409999	human	ensembl	69_37n	+1	known	in_frame_ins	c.314_315	p.E105in_frame_insDL	0.987:0.974	NULL	NULL	-	no_errors	C5orf52	HGNC	ENSG00000187658	123	0	0.00	83	36	30.25	-	-	-
C5orf52	0	genome.wustl.edu	37	5	157102203	157102204	+	Frame_Shift_Ins	INS	-	-	AC			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	5	157102203	157102204	-	AC	INS	C5orf52	ENST00000409999	human	ensembl	69_37n	+1	known	frame_shift_ins	c.316_317	p.M106fs	0.970:0.974	NULL	NULL	-	no_errors	C5orf52	HGNC	ENSG00000187658	121	0	0.00	72	36	33.33	-	-	-
CACNG2	0	genome.wustl.edu	37	22	36983554	36983554	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	22	36983554	36983554	C	T	SNP	CACNG2	ENST00000300105	human	ensembl	69_37n	-1	known	missense	c.253	p.E85K	0.451	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu,prints_VDCC_g2su,prints_Claudin	-	no_errors	CACNG2	HGNC	ENSG00000166862	268	0	0.00	243	44	15.33	-	-	-
CDC42BPA	0	genome.wustl.edu	37	1	227182616	227182616	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	1	227182616	227182616	G	A	SNP	CDC42BPA	ENST00000334218	human	ensembl	69_37n	-1	known	missense	c.5122	p.R1708W	1.000	NULL	pfam_Citron,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Pkinase_C,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,superfamily_WD40_repeat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_PAK_box_Rho-bd,pfscan_PAK_box_Rho-bd,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	CDC42BPA	HGNC	ENSG00000143776	156	0	0.00	134	173	55.99	-	-	-
CEACAM18	0	genome.wustl.edu	37	19	51984819	51984819	+	Silent	SNP	C	C	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	19	51984819	51984819	C	G	SNP	CEACAM18	ENST00000451626	human	ensembl	69_37n	+1	known	silent	c.756	p.V252	0.002	smart_Ig_sub	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	CEACAM18	HGNC	ENSG00000213822	96	0	0.00	144	22	13.25	-	-	-
CETP	0	genome.wustl.edu	37	16	57009014	57009014	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	16	57009014	57009014	C	T	SNP	CETP	ENST00000200676	human	ensembl	69_37n	+1	known	missense	c.932	p.A311V	0.006	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C,pirsf_Cholesteryl_ester_transfer	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C,pirsf_Cholesteryl_ester_transfer	-	no_errors	CETP	HGNC	ENSG00000087237	383	0	0.00	199	52	20.55	-	-	-
CFB	0	genome.wustl.edu	37	6	31911214	31911215	+	Frame_Shift_Ins	INS	-	-	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	6	31911214	31911215	-	G	INS	CFB	ENST00000556679	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1018_1019	p.A342fs	1.000:0.996	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_VWF_A,pfam_Sushi_SCR_CCP,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,smart_VWF_A,smart_Peptidase_S1_S6,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	CFB	HGNC	ENSG00000243649	8	0	0.00	4	2	33.33	-	-	-
COL20A1	0	genome.wustl.edu	37	20	61959802	61959803	+	Frame_Shift_Ins	INS	-	-	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	20	61959802	61959803	-	T	INS	COL20A1	ENST00000326996	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3829_3830	p.V1278fs	0.001:0.004	NULL	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL20A1	HGNC	ENSG00000101203	58	0	0.00	7	2	22.22	-	-	-
DNAH8	0	genome.wustl.edu	37	6	38863942	38863942	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	6	38863942	38863942	G	A	SNP	DNAH8	ENST00000359357	human	ensembl	69_37n	+1	known	missense	c.8230	p.E2744K	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	134	0	0.00	212	33	13.47	-	-	-
DPP4	0	genome.wustl.edu	37	2	162875265	162875265	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	2	162875265	162875265	G	A	SNP	DPP4	ENST00000360534	human	ensembl	69_37n	-1	known	missense	c.1394	p.A465V	0.877	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP4	HGNC	ENSG00000197635	163	0	0.00	117	16	12.03	-	-	-
ENSA	0	genome.wustl.edu	37	1	150600017	150600017	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	1	150600017	150600017	G	C	SNP	ENSA	ENST00000369009	human	ensembl	69_37n	-1	known	missense	c.109	p.L37V	1.000	NULL	pfam_Endosulphine	-	no_errors	ENSA	HGNC	ENSG00000143420	46	0	0.00	72	44	37.93	-	-	-
FGG	0	genome.wustl.edu	37	4	155533328	155533328	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	4	155533328	155533328	C	T	SNP	FGG	ENST00000336098	human	ensembl	69_37n	-1	known	missense	c.149	p.G50D	1.000	pfam_Fibrinogen_a/b/g_coil_dom	pfam_Fibrinogen_a/b/g_C,pfam_Fibrinogen_a/b/g_coil_dom,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	-	no_errors	FGG	HGNC	ENSG00000171557	151	0	0.00	92	67	42.14	-	-	-
G6PD	0	genome.wustl.edu	37	X	153761880	153761880	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	X	153761880	153761880	C	T	SNP	G6PD	ENST00000369620	human	ensembl	69_37n	-1	known	missense	c.913	p.V305M	1.000	pfam_G6P_DH_C,pirsf_G6P_DH	pfam_G6P_DH_C,pfam_G6P_DH_NAD-bd,pirsf_G6P_DH,prints_G6P_DH	-	no_errors	G6PD	HGNC	ENSG00000160211	124	0	0.00	59	15	20.27	-	-	-
GAB4	0	genome.wustl.edu	37	22	17451008	17451008	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	22	17451008	17451008	C	A	SNP	GAB4	ENST00000400588	human	ensembl	69_37n	-1	known	missense	c.762	p.Q254H	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB4	HGNC	ENSG00000215568	144	0	0.00	105	20	16.00	-	-	-
GP5	0	genome.wustl.edu	37	3	194117824	194117824	+	Silent	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	3	194117824	194117824	G	A	SNP	GP5	ENST00000323007	human	ensembl	69_37n	-1	known	silent	c.1188	p.H396	0.588	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	GP5	HGNC	ENSG00000178732	17	0	0.00	14	4	22.22	-	-	-
GPRASP2	0	genome.wustl.edu	37	X	101971946	101971946	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	X	101971946	101971946	G	T	SNP	GPRASP2	ENST00000332262	human	ensembl	69_37n	+1	known	missense	c.2149	p.A717S	0.733	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP2	HGNC	ENSG00000158301	73	0	0.00	56	19	25.33	-	-	-
H2AFZ	0	genome.wustl.edu	37	4	100870877	100870877	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	4	100870877	100870877	C	G	SNP	H2AFZ	ENST00000296417	human	ensembl	69_37n	-1	known	missense	c.24	p.K8N	1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	H2AFZ	HGNC	ENSG00000164032	72	0	0.00	25	14	35.90	-	-	-
HIBCH	0	genome.wustl.edu	37	2	191069855	191069855	+	Missense_Mutation	SNP	A	A	C			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	2	191069855	191069855	A	C	SNP	HIBCH	ENST00000359678	human	ensembl	69_37n	-1	known	missense	c.1149	p.D383E	1.000	NULL	pfam_Crotonase_core	-	no_errors	HIBCH	HGNC	ENSG00000198130	265	0	0.00	179	63	26.03	-	-	-
HNRNPUL1	0	genome.wustl.edu	37	19	41811615	41811615	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	19	41811615	41811615	G	C	SNP	HNRNPUL1	ENST00000392006	human	ensembl	69_37n	+1	known	missense	c.2297	p.G766A	0.966	NULL	pfam_SPRY_rcpt,pfam_SAP_DNA-bd,superfamily_ConA-like_lec_gl,smart_SAP_DNA-bd,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_DNA-bd	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323	257	1	0.39	139	49	26.06	-	-	-
LMBRD1	0	genome.wustl.edu	37	6	70428924	70428924	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	6	70428924	70428924	C	T	SNP	LMBRD1	ENST00000370577	human	ensembl	69_37n	-1	known	missense	c.686	p.S229N	0.996	pfam_LMBR1-like_membr_prot	pfam_LMBR1-like_membr_prot	-	no_errors	LMBRD1	HGNC	ENSG00000168216	115	0	0.00	141	23	14.02	-	-	-
LRP1	0	genome.wustl.edu	37	12	57600299	57600299	+	Frame_Shift_Del	DEL	C	C	-			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	12	57600299	57600299	C	-	DEL	LRP1	ENST00000243077	human	ensembl	69_37n	+1	known	frame_shift_del	c.11634	p.R3879fs	1.000	superfamily_Growth_fac_rcpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	106	0	0.00	49	168	77.06	-	-	-
LRP1	0	genome.wustl.edu	37	12	57600303	57600303	+	Frame_Shift_Del	DEL	A	A	-			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	12	57600303	57600303	A	-	DEL	LRP1	ENST00000243077	human	ensembl	69_37n	+1	known	frame_shift_del	c.11638	p.S3880fs	1.000	superfamily_Growth_fac_rcpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	114	0	0.00	53	168	74.34	-	-	-
LRP1	0	genome.wustl.edu	37	12	57600307	57600307	+	Frame_Shift_Del	DEL	T	T	-			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	12	57600307	57600307	T	-	DEL	LRP1	ENST00000243077	human	ensembl	69_37n	+1	known	frame_shift_del	c.11642	p.L3881fs	1.000	superfamily_Growth_fac_rcpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	117	0	0.00	54	173	71.49	-	-	-
LRP2BP	0	genome.wustl.edu	37	4	186296782	186296782	+	Silent	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	4	186296782	186296782	C	T	SNP	LRP2BP	ENST00000362004	human	ensembl	69_37n	-1	known	silent	c.321	p.G107	0.997	pfam_Sel1-like,smart_Sel1-like	pfam_Sel1-like,pfam_TPR_2,smart_Sel1-like,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	LRP2BP	HGNC	ENSG00000109771	149	0	0.00	56	39	41.05	-	-	-
MAP2K4	0	genome.wustl.edu	37	17	11958309	11958310	+	Splice_Site	INS	-	-	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	17	11958309	11958310	-	T	INS	MAP2K4	ENST00000415385	human	ensembl	69_37n	+1	known	splice_site_ins	c.251+1_251+1	e3+1	1.000:1.000	-	-	-	no_errors	MAP2K4	HGNC	ENSG00000065559	160	0	0.00	43	98	69.50	-	-	-
MUC4	0	genome.wustl.edu	37	3	195512343	195512343	+	Silent	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	3	195512343	195512343	G	A	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	silent	c.6108	p.T2036	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	28	0	0.00	21	5	19.23	-	-	-
MXD4	0	genome.wustl.edu	37	4	2252287	2252287	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	4	2252287	2252287	C	T	SNP	MXD4	ENST00000337190	human	ensembl	69_37n	-1	known	missense	c.614	p.R205H	0.908	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	MXD4	HGNC	ENSG00000123933	20	0	0.00	5	6	50.00	-	-	-
NF1	0	genome.wustl.edu	37	17	29657384	29657384	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	17	29657384	29657384	G	C	SNP	NF1	ENST00000358273	human	ensembl	69_37n	+1	known	missense	c.5680	p.E1894Q	1.000	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712	173	0	0.00	128	32	20.00	-	-	-
NFASC	0	genome.wustl.edu	37	1	204938069	204938069	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	1	204938069	204938069	A	G	SNP	NFASC	ENST00000367172	human	ensembl	69_37n	+1	known	missense	c.962	p.K321R	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	NFASC	HGNC	ENSG00000163531	283	0	0.00	253	29	10.28	-	-	-
NLRP1	0	genome.wustl.edu	37	17	5418124	5418124	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	17	5418124	5418124	C	A	SNP	NLRP1	ENST00000572272	human	ensembl	69_37n	-1	known	nonsense	c.4372	p.E1458*	0.025	pfam_CARD,superfamily_DEATH-like,pfscan_CARD	pfam_CARD,pfam_DAPIN,pfam_Leu-rich_rpt,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD,pfscan_DAPIN,prints_Disease_R	-	no_errors	NLRP1	HGNC	ENSG00000091592	290	0	0.00	109	35	24.14	-	-	-
NRXN2	0	genome.wustl.edu	37	11	64375285	64375286	+	Frame_Shift_Ins	INS	-	-	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	11	64375285	64375286	-	G	INS	NRXN2	ENST00000265459	human	ensembl	69_37n	-1	known	frame_shift_ins	c.4522_4521	p.T1507fs	1.000:0.926	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076	62	0	0.00	33	4	10.81	-	-	-
OR51Q1	0	genome.wustl.edu	37	11	5443511	5443511	+	Silent	SNP	C	C	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	11	5443511	5443511	C	A	SNP	OR51Q1	ENST00000300778	human	ensembl	69_37n	+1	known	silent	c.81	p.I27	0.331	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR51Q1	HGNC	ENSG00000167360	252	0	0.00	318	54	14.52	-	-	-
PCYOX1	0	genome.wustl.edu	37	2	70503936	70503936	+	Silent	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	2	70503936	70503936	C	T	SNP	PCYOX1	ENST00000433351	human	ensembl	69_37n	+1	known	silent	c.930	p.I310	0.516	pfam_Prenylcys_lyase,pirsf_Prenylcysteine_Oxase	pfam_Prenylcys_lyase,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase,pirsf_Prenylcysteine_Oxase	-	no_errors	PCYOX1	HGNC	ENSG00000116005	43	0	0.00	40	5	11.11	-	-	-
PER3	0	genome.wustl.edu	37	1	7844972	7844972	+	Frame_Shift_Del	DEL	G	G	-			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	1	7844972	7844972	G	-	DEL	PER3	ENST00000361923	human	ensembl	69_37n	+1	known	frame_shift_del	c.35	p.A14fs	0.000	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,smart_PAS,pfscan_PAS	-	no_errors	PER3	HGNC	ENSG00000049246	23	0	0.00	2	6	60.00	-	-	-
PHLDB3	0	genome.wustl.edu	37	19	44006351	44006351	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	19	44006351	44006351	G	A	SNP	PHLDB3	ENST00000292140	human	ensembl	69_37n	-1	known	missense	c.298	p.R100C	0.993	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB3	HGNC	ENSG00000176531	92	0	0.00	75	18	18.37	-	-	-
PLOD3	0	genome.wustl.edu	37	7	100853849	100853849	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	7	100853849	100853849	G	A	SNP	PLOD3	ENST00000454310	human	ensembl	69_37n	-1	novel	missense	c.188	p.T63I	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PLOD3	HGNC	ENSG00000106397	120	0	0.00	147	41	21.58	-	-	-
POLR3F	0	genome.wustl.edu	37	20	18462391	18462391	+	Frame_Shift_Del	DEL	C	C	-			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	20	18462391	18462391	C	-	DEL	POLR3F	ENST00000377603	human	ensembl	69_37n	+1	known	frame_shift_del	c.810	p.Y270fs	0.998	pfam_RNA_pol_Rpc34,pirsf_RNA_pol_Rpc34	pfam_RNA_pol_Rpc34,pirsf_RNA_pol_Rpc34	-	no_errors	POLR3F	HGNC	ENSG00000132664	99	0	0.00	113	53	30.64	-	-	-
PROX1	0	genome.wustl.edu	37	1	214170689	214170689	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	1	214170689	214170689	G	T	SNP	PROX1	ENST00000261454	human	ensembl	69_37n	+1	known	missense	c.811	p.D271Y	1.000	pfam_Prox1	pfam_Prox1,superfamily_Homeodomain-like	-	no_errors	PROX1	HGNC	ENSG00000117707	109	0	0.00	151	30	16.57	-	-	-
PTK7	0	genome.wustl.edu	37	6	43107257	43107257	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	6	43107257	43107257	C	T	SNP	PTK7	ENST00000230419	human	ensembl	69_37n	+1	known	missense	c.1612	p.R538W	0.988	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Immunoglobulin,pfam_Prot_kinase_cat_dom,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	PTK7	HGNC	ENSG00000112655	196	0	0.00	122	49	28.65	-	-	-
RAB3C	0	genome.wustl.edu	37	5	57913553	57913553	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	5	57913553	57913553	C	G	SNP	RAB3C	ENST00000282878	human	ensembl	69_37n	+1	known	missense	c.108	p.I36M	0.912	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB3C	HGNC	ENSG00000152932	73	0	0.00	61	20	24.69	-	-	-
RGAG1	0	genome.wustl.edu	37	X	109694759	109694759	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	X	109694759	109694759	G	T	SNP	RGAG1	ENST00000465301	human	ensembl	69_37n	+1	known	missense	c.914	p.G305V	0.009	NULL	NULL	-	no_errors	RGAG1	HGNC	ENSG00000243978	304	0	0.00	210	37	14.98	-	-	-
RSL1D1	0	genome.wustl.edu	37	16	11940376	11940376	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	16	11940376	11940376	G	A	SNP	RSL1D1	ENST00000571133	human	ensembl	69_37n	-1	known	missense	c.617	p.S206F	1.000	pfam_Ribosomal_L1,superfamily_Ribosomal_L1_SF	pfam_Ribosomal_L1,superfamily_Ribosomal_L1_SF	-	no_errors	RSL1D1	HGNC	ENSG00000171490	97	0	0.00	139	27	16.17	-	-	-
SLC9A3R1	0	genome.wustl.edu	37	17	72764791	72764791	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	17	72764791	72764791	T	C	SNP	SLC9A3R1	ENST00000262613	human	ensembl	69_37n	+1	known	missense	c.1073	p.L358P	1.000	pfam_EBP50_C-term,pirsf_NaH_exchngr_reg_CF_NHE-RF	pfam_PDZ,pfam_EBP50_C-term,superfamily_PDZ,smart_PDZ,pirsf_NaH_exchngr_reg_CF_NHE-RF,pfscan_PDZ	-	no_errors	SLC9A3R1	HGNC	ENSG00000109062	77	0	0.00	21	9	30.00	-	-	-
SLCO1A2	0	genome.wustl.edu	37	12	21445147	21445147	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	12	21445147	21445147	T	C	SNP	SLCO1A2	ENST00000307378	human	ensembl	69_37n	-1	known	missense	c.1561	p.S521G	0.929	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal-type_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1A2	HGNC	ENSG00000084453	189	0	0.00	85	12	12.37	-	-	-
SPTBN5	0	genome.wustl.edu	37	15	42144894	42144894	+	Frame_Shift_Del	DEL	G	G	-			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	15	42144894	42144894	G	-	DEL	SPTBN5	ENST00000320955	human	ensembl	69_37n	-1	known	frame_shift_del	c.10387	p.Q3463fs	0.346	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877	100	0	0.00	7	2	22.22	-	-	-
TMTC3	0	genome.wustl.edu	37	12	88589349	88589349	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	12	88589349	88589349	A	G	SNP	TMTC3	ENST00000266712	human	ensembl	69_37n	+1	known	missense	c.2668	p.I890V	1.000	NULL	pfam_TPR_2,pfam_TPR-1,pfam_DUF1736,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC3	HGNC	ENSG00000139324	79	0	0.00	26	46	63.89	-	-	-
TTC39A	0	genome.wustl.edu	37	1	51767913	51767913	+	Frame_Shift_Del	DEL	C	C	-			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	1	51767913	51767913	C	-	DEL	TTC39A	ENST00000262676	human	ensembl	69_37n	-1	known	frame_shift_del	c.1103	p.G368fs	0.000	NULL	pfam_OMP_IML2_mit/TPR_39	-	no_errors	TTC39A	HGNC	ENSG00000085831	16	0	0.00	4	2	33.33	-	-	-
UBA7	0	genome.wustl.edu	37	3	49847490	49847490	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	3	49847490	49847490	G	A	SNP	UBA7	ENST00000333486	human	ensembl	69_37n	-1	known	missense	c.1760	p.S587L	0.000	pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_UBact_repeat,pfam_Ub-activating_enz_e1_C,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA7	HGNC	ENSG00000182179	71	0	0.00	13	10	43.48	-	-	-
YIPF4	0	genome.wustl.edu	37	2	32515694	32515694	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	2	32515694	32515694	C	A	SNP	YIPF4	ENST00000238831	human	ensembl	69_37n	+1	known	missense	c.222	p.N74K	0.999	NULL	pfam_Yip1	-	no_errors	YIPF4	HGNC	ENSG00000119820	28	0	0.00	11	10	47.62	-	-	-
ZC2HC1C	0	genome.wustl.edu	37	14	75537877	75537877	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	14	75537877	75537877	G	A	SNP	ZC2HC1C	ENST00000524913	human	ensembl	69_37n	+1	known	missense	c.601	p.A201T	0.000	NULL	NULL	-	no_errors	ZC2HC1C	HGNC	ENSG00000119703	200	0	0.00	254	29	10.21	-	-	-
ZNF238	0	genome.wustl.edu	37	1	244218061	244218061	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	1	244218061	244218061	G	T	SNP	ZNF238	ENST00000358704	human	ensembl	69_37n	+1	known	missense	c.985	p.D329Y	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZNF238	HGNC	ENSG00000179456	129	0	0.00	175	38	17.84	-	-	-
ZNF541	0	genome.wustl.edu	37	19	48049093	48049094	+	Frame_Shift_Ins	INS	-	-	G			TCGA-B6-A0IB-01A-11W-A050-09	TCGA-B6-A0IB-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ff80d5cd-7aed-499f-a472-153cc40f65de	0caeac20-293e-4c97-8074-3f9d78e5ef3e	19	48049093	48049094	-	G	INS	ZNF541	ENST00000314121	human	ensembl	69_37n	-1	known	frame_shift_ins	c.693_692	p.E232fs	0.350:0.371	NULL	pfam_ELM2_dom,pfam_Znf_C2H2,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	ZNF541	HGNC	ENSG00000118156	12	0	0.00	4	3	42.86	-	-	-
