Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABHD6	0	genome.wustl.edu	37	3	58253048	58253048	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	3	58253048	58253048	G	C	SNP	ABHD6	ENST00000295962	human	ensembl	69_37n	+1	known	missense	c.252	p.K84N	1.000	prints_Epox_hydrolase-like	pfam_AB_hydrolase_1,pfam_Ndr,prints_AB_hydrolase_1,prints_Epox_hydrolase-like	-	no_errors	ABHD6	HGNC	ENSG00000163686	273	0	0.00	141	23	14.02	-	-	-
ABHD6	0	genome.wustl.edu	37	3	58253048	58253048	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	3	58253048	58253048	G	C	SNP	ABHD6	ENST00000295962	human	ensembl	69_37n	+1	known	missense	c.252	p.K84N	1.000	prints_Epox_hydrolase-like	pfam_AB_hydrolase_1,pfam_Ndr,prints_AB_hydrolase_1,prints_Epox_hydrolase-like	-	no_errors	ABHD6	HGNC	ENSG00000163686	105	0	0.00	141	23	14.02	-	-	-
BAZ1B	0	genome.wustl.edu	37	7	72925144	72925144	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	7	72925144	72925144	A	T	SNP	BAZ1B	ENST00000339594	human	ensembl	69_37n	-1	known	missense	c.146	p.I49N	1.000	pfam_WSTF_Acf1_Cbp146,pfscan_WSTF_Acf1_Cbp146	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1B	HGNC	ENSG00000009954	339	0	0.00	207	46	18.18	-	-	-
BAZ1B	0	genome.wustl.edu	37	7	72925144	72925144	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	7	72925144	72925144	A	T	SNP	BAZ1B	ENST00000339594	human	ensembl	69_37n	-1	known	missense	c.146	p.I49N	1.000	pfam_WSTF_Acf1_Cbp146,pfscan_WSTF_Acf1_Cbp146	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1B	HGNC	ENSG00000009954	129	0	0.00	207	46	18.18	-	-	-
BSX	0	genome.wustl.edu	37	11	122850010	122850010	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	11	122850010	122850010	G	A	SNP	BSX	ENST00000343035	human	ensembl	69_37n	-1	known	nonsense	c.418	p.R140*	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Homeobox_metazoa,pfscan_Homeodomain	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Homeobox_metazoa,pfscan_Homeodomain	-	no_errors	BSX	HGNC	ENSG00000188909	219	1	0.45	39	14	26.42	-	-	-
BSX	0	genome.wustl.edu	37	11	122850010	122850010	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	11	122850010	122850010	G	A	SNP	BSX	ENST00000343035	human	ensembl	69_37n	-1	known	nonsense	c.418	p.R140*	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Homeobox_metazoa,pfscan_Homeodomain	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Homeobox_metazoa,pfscan_Homeodomain	-	no_errors	BSX	HGNC	ENSG00000188909	22	0	0.00	39	14	26.42	-	-	-
C14orf43	0	genome.wustl.edu	37	14	74188061	74188061	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	14	74188061	74188061	C	-	DEL	C14orf43	ENST00000286523	human	ensembl	69_37n	-1	known	frame_shift_del	c.2876	p.R959fs	1.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	C14orf43	HGNC	ENSG00000156030	69	0	0.00	23	23	50.00	-	-	-
C14orf43	0	genome.wustl.edu	37	14	74188061	74188061	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	14	74188061	74188061	C	-	DEL	C14orf43	ENST00000286523	human	ensembl	69_37n	-1	known	frame_shift_del	c.2876	p.R959fs	1.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	C14orf43	HGNC	ENSG00000156030	27	0	0.00	23	23	50.00	-	-	-
C1orf52	0	genome.wustl.edu	37	1	85718266	85718266	+	RNA	SNP	A	A	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	1	85718266	85718266	A	T	SNP	C1orf52	ENST00000294661	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C1orf52	HGNC	ENSG00000162642	55	0	0.00	41	9	18.00	-	-	-
C1orf52	0	genome.wustl.edu	37	1	85718266	85718266	+	RNA	SNP	A	A	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	1	85718266	85718266	A	T	SNP	C1orf52	ENST00000294661	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C1orf52	HGNC	ENSG00000162642	42	0	0.00	41	9	18.00	-	-	-
C2orf71	0	genome.wustl.edu	37	2	29293783	29293783	+	Silent	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	2	29293783	29293783	C	T	SNP	C2orf71	ENST00000331664	human	ensembl	69_37n	-1	novel	silent	c.3345	p.V1115	0.000	NULL	NULL	-	no_errors	C2orf71	HGNC	ENSG00000179270	34	0	0.00	15	8	34.78	-	-	-
C2orf71	0	genome.wustl.edu	37	2	29293783	29293783	+	Silent	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	2	29293783	29293783	C	T	SNP	C2orf71	ENST00000331664	human	ensembl	69_37n	-1	novel	silent	c.3345	p.V1115	0.000	NULL	NULL	-	no_errors	C2orf71	HGNC	ENSG00000179270	24	0	0.00	15	8	34.78	-	-	-
CAPN3	0	genome.wustl.edu	37	15	42652165	42652165	+	Silent	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	15	42652165	42652165	C	T	SNP	CAPN3	ENST00000397163	human	ensembl	69_37n	+1	known	silent	c.162	p.I54	0.016	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_Ca-bd,prints_Calpain_cysteine_protease,pfscan_EF_HAND_2,pfscan_Peptidase_C2_calpain_cat	-	no_errors	CAPN3	HGNC	ENSG00000092529	203	0	0.00	306	66	17.60	-	-	-
CAPN3	0	genome.wustl.edu	37	15	42652165	42652165	+	Silent	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	15	42652165	42652165	C	T	SNP	CAPN3	ENST00000397163	human	ensembl	69_37n	+1	known	silent	c.162	p.I54	0.016	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_Ca-bd,prints_Calpain_cysteine_protease,pfscan_EF_HAND_2,pfscan_Peptidase_C2_calpain_cat	-	no_errors	CAPN3	HGNC	ENSG00000092529	263	0	0.00	306	66	17.60	-	-	-
CD74	0	genome.wustl.edu	37	5	149784647	149784647	+	Splice_Site	DEL	C	C	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	5	149784647	149784647	C	-	DEL	CD74	ENST00000009530	human	ensembl	69_37n	-1	known	splice_site_del	c.537+1	e5+1	1.000	-	-	-	no_errors	CD74	HGNC	ENSG00000019582	120	0	0.00	57	49	44.55	-	-	-
CD74	0	genome.wustl.edu	37	5	149784647	149784647	+	Splice_Site	DEL	C	C	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	5	149784647	149784647	C	-	DEL	CD74	ENST00000009530	human	ensembl	69_37n	-1	known	splice_site_del	c.537+1	e5+1	1.000	-	-	-	no_errors	CD74	HGNC	ENSG00000019582	67	0	0.00	57	49	44.55	-	-	-
COL13A1	0	genome.wustl.edu	37	10	71562273	71562273	+	Silent	SNP	C	C	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	10	71562273	71562273	C	A	SNP	COL13A1	ENST00000356340	human	ensembl	69_37n	+1	known	silent	c.94	p.R32	0.274	NULL	pfam_Collagen	-	no_errors	COL13A1	HGNC	ENSG00000197467	9	0	0.00	5	5	50.00	-	-	-
DHTKD1	0	genome.wustl.edu	37	10	12129635	12129635	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	10	12129635	12129635	G	A	SNP	DHTKD1	ENST00000263035	human	ensembl	69_37n	+1	known	missense	c.624	p.M208I	0.186	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_Transketolase-like_Pyr-bd,pfam_DH_E1,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	DHTKD1	HGNC	ENSG00000181192	188	0	0.00	141	32	18.50	-	-	-
DHTKD1	0	genome.wustl.edu	37	10	12129635	12129635	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	10	12129635	12129635	G	A	SNP	DHTKD1	ENST00000263035	human	ensembl	69_37n	+1	known	missense	c.624	p.M208I	0.186	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_Transketolase-like_Pyr-bd,pfam_DH_E1,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	DHTKD1	HGNC	ENSG00000181192	74	0	0.00	141	32	18.50	-	-	-
DIAPH2	0	genome.wustl.edu	37	X	95993637	95993637	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	X	95993637	95993637	T	G	SNP	DIAPH2	ENST00000324765	human	ensembl	69_37n	+1	known	missense	c.218	p.L73R	1.000	NULL	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg	-	no_errors	DIAPH2	HGNC	ENSG00000147202	130	0	0.00	203	88	30.24	-	-	-
DIAPH2	0	genome.wustl.edu	37	X	95993637	95993637	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	X	95993637	95993637	T	G	SNP	DIAPH2	ENST00000324765	human	ensembl	69_37n	+1	known	missense	c.218	p.L73R	1.000	NULL	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg	-	no_errors	DIAPH2	HGNC	ENSG00000147202	339	0	0.00	203	88	30.24	-	-	-
DPYSL5	0	genome.wustl.edu	37	2	27167565	27167565	+	Silent	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	2	27167565	27167565	G	A	SNP	DPYSL5	ENST00000288699	human	ensembl	69_37n	+1	known	silent	c.1482	p.G494	1.000	NULL	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL5	HGNC	ENSG00000157851	171	1	0.58	66	39	37.14	-	-	-
DPYSL5	0	genome.wustl.edu	37	2	27167565	27167565	+	Silent	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	2	27167565	27167565	G	A	SNP	DPYSL5	ENST00000288699	human	ensembl	69_37n	+1	known	silent	c.1482	p.G494	1.000	NULL	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL5	HGNC	ENSG00000157851	80	0	0.00	66	39	37.14	-	-	-
EDA2R	0	genome.wustl.edu	37	X	65819449	65819449	+	Silent	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	X	65819449	65819449	C	T	SNP	EDA2R	ENST00000253392	human	ensembl	69_37n	-1	known	silent	c.834	p.L278	1.000	prints_TNFR_27	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,prints_TNFR_27,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	EDA2R	HGNC	ENSG00000131080	60	0	0.00	19	8	29.63	-	-	-
EDA2R	0	genome.wustl.edu	37	X	65819449	65819449	+	Silent	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	X	65819449	65819449	C	T	SNP	EDA2R	ENST00000253392	human	ensembl	69_37n	-1	known	silent	c.834	p.L278	1.000	prints_TNFR_27	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,prints_TNFR_27,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	EDA2R	HGNC	ENSG00000131080	43	0	0.00	19	8	29.63	-	-	-
EEF2K	0	genome.wustl.edu	37	16	22291592	22291592	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	16	22291592	22291592	G	T	SNP	EEF2K	ENST00000263026	human	ensembl	69_37n	+1	known	nonsense	c.1963	p.E655*	1.000	pirsf_Elongation_factor_2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC	ENSG00000103319	90	0	0.00	37	18	32.73	-	-	-
EEF2K	0	genome.wustl.edu	37	16	22291592	22291592	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	16	22291592	22291592	G	T	SNP	EEF2K	ENST00000263026	human	ensembl	69_37n	+1	known	nonsense	c.1963	p.E655*	1.000	pirsf_Elongation_factor_2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC	ENSG00000103319	28	0	0.00	37	18	32.73	-	-	-
FGL2	0	genome.wustl.edu	37	7	76825930	76825930	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	7	76825930	76825930	C	T	SNP	FGL2	ENST00000248598	human	ensembl	69_37n	-1	known	missense	c.986	p.R329H	1.000	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	-	no_errors	FGL2	HGNC	ENSG00000127951	194	0	0.00	263	79	23.10	-	-	-
FGL2	0	genome.wustl.edu	37	7	76825930	76825930	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	7	76825930	76825930	C	T	SNP	FGL2	ENST00000248598	human	ensembl	69_37n	-1	known	missense	c.986	p.R329H	1.000	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	-	no_errors	FGL2	HGNC	ENSG00000127951	324	0	0.00	263	79	23.10	-	-	-
FUK	0	genome.wustl.edu	37	16	70504321	70504322	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	16	70504321	70504322	-	TG	INS	FUK	ENST00000378912	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1156_1157	p.Q386fs	0.999:1.000	pfam_Fucokinase,superfamily_Trimer_LpxA-like	pfam_Fucokinase,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Trimer_LpxA-like,prints_Galkinase	-	no_errors	FUK	HGNC	ENSG00000157353	45	0	0.00	39	173	81.60	-	-	-
FUK	0	genome.wustl.edu	37	16	70504321	70504322	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	16	70504321	70504322	-	TG	INS	FUK	ENST00000378912	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1156_1157	p.Q386fs	0.999:1.000	pfam_Fucokinase,superfamily_Trimer_LpxA-like	pfam_Fucokinase,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Trimer_LpxA-like,prints_Galkinase	-	no_errors	FUK	HGNC	ENSG00000157353	29	0	0.00	39	173	81.60	-	-	-
GOLGA8DP	0	genome.wustl.edu	37	15	22710187	22710187	+	RNA	SNP	A	A	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	15	22710187	22710187	A	G	SNP	GOLGA8DP	ENST00000314246	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GOLGA8DP	HGNC	ENSG00000185182	11	0	0.00	22	8	26.67	-	-	-
GPR32	0	genome.wustl.edu	37	19	51273962	51273962	+	Silent	SNP	G	G	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	19	51273962	51273962	G	T	SNP	GPR32	ENST00000270590	human	ensembl	69_37n	+1	known	silent	c.105	p.L35	0.004	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Frt_met_rcpt	-	no_errors	GPR32	HGNC	ENSG00000142511	163	0	0.00	88	12	12.00	-	-	-
GPR32	0	genome.wustl.edu	37	19	51273962	51273962	+	Silent	SNP	G	G	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	19	51273962	51273962	G	T	SNP	GPR32	ENST00000270590	human	ensembl	69_37n	+1	known	silent	c.105	p.L35	0.004	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Frt_met_rcpt	-	no_errors	GPR32	HGNC	ENSG00000142511	32	0	0.00	88	12	12.00	-	-	-
GRIA1	0	genome.wustl.edu	37	5	153149914	153149914	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	5	153149914	153149914	G	A	SNP	GRIA1	ENST00000448073	human	ensembl	69_37n	+1	known	missense	c.2239	p.V747M	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511	312	0	0.00	145	28	16.18	-	-	-
GRIA1	0	genome.wustl.edu	37	5	153149914	153149914	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	5	153149914	153149914	G	A	SNP	GRIA1	ENST00000448073	human	ensembl	69_37n	+1	known	missense	c.2239	p.V747M	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511	220	0	0.00	145	28	16.18	-	-	-
HLA-DRB1	0	genome.wustl.edu	37	6	32557461	32557461	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	6	32557461	32557461	A	G	SNP	HLA-DRB1	ENST00000360004	human	ensembl	69_37n	-1	known	missense	c.59	p.M20T	0.430	superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DRB1	HGNC	ENSG00000196126	221	2	0.90	163	24	12.83	-	-	-
HLA-DRB5	0	genome.wustl.edu	37	6	32489822	32489822	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	6	32489822	32489822	C	T	SNP	HLA-DRB5	ENST00000374975	human	ensembl	69_37n	-1	known	missense	c.230	p.R77Q	0.000	pfam_MHC_II_b_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DRB5	HGNC	ENSG00000198502	20	0	0.00	17	8	32.00	-	-	-
HMCN1	0	genome.wustl.edu	37	1	185833711	185833711	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	1	185833711	185833711	A	C	SNP	HMCN1	ENST00000271588	human	ensembl	69_37n	+1	known	missense	c.449	p.Y150S	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd,pfam_Thrombospondin_1_rpt,superfamily_Green_fluorescent_prot-like,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	HMCN1	HGNC	ENSG00000143341	176	0	0.00	170	23	11.86	-	-	-
HMCN1	0	genome.wustl.edu	37	1	185833711	185833711	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	1	185833711	185833711	A	C	SNP	HMCN1	ENST00000271588	human	ensembl	69_37n	+1	known	missense	c.449	p.Y150S	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd,pfam_Thrombospondin_1_rpt,superfamily_Green_fluorescent_prot-like,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	HMCN1	HGNC	ENSG00000143341	207	1	0.48	170	23	11.86	-	-	-
IFT140	0	genome.wustl.edu	37	16	1616239	1616240	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	16	1616239	1616240	TG	-	DEL	IFT140	ENST00000426508	human	ensembl	69_37n	-1	known	frame_shift_del	c.1824_1823	p.T608fs	0.006:0.882	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535	359	0	0.00	295	39	11.64	-	-	-
IFT140	0	genome.wustl.edu	37	16	1616239	1616240	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	16	1616239	1616240	TG	-	DEL	IFT140	ENST00000426508	human	ensembl	69_37n	-1	known	frame_shift_del	c.1824_1823	p.T608fs	0.006:0.882	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535	234	0	0.00	295	39	11.64	-	-	-
IPCEF1	0	genome.wustl.edu	37	6	154481152	154481152	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	6	154481152	154481152	C	G	SNP	IPCEF1	ENST00000367220	human	ensembl	69_37n	-1	known	missense	c.1128	p.M376I	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	IPCEF1	HGNC	ENSG00000074706	235	0	0.00	141	25	15.06	-	-	-
IPCEF1	0	genome.wustl.edu	37	6	154481152	154481152	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	6	154481152	154481152	C	G	SNP	IPCEF1	ENST00000367220	human	ensembl	69_37n	-1	known	missense	c.1128	p.M376I	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	IPCEF1	HGNC	ENSG00000074706	222	0	0.00	141	25	15.06	-	-	-
IQCH	0	genome.wustl.edu	37	15	67652219	67652219	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	15	67652219	67652219	G	A	SNP	IQCH	ENST00000335894	human	ensembl	69_37n	+1	known	missense	c.749	p.R250K	0.000	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCH	HGNC	ENSG00000103599	223	0	0.00	153	25	14.04	-	-	-
IQCH	0	genome.wustl.edu	37	15	67652219	67652219	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	15	67652219	67652219	G	A	SNP	IQCH	ENST00000335894	human	ensembl	69_37n	+1	known	missense	c.749	p.R250K	0.000	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCH	HGNC	ENSG00000103599	193	0	0.00	153	25	14.04	-	-	-
KRT6C	0	genome.wustl.edu	37	12	52867105	52867105	+	Silent	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	12	52867105	52867105	G	A	SNP	KRT6C	ENST00000252250	human	ensembl	69_37n	-1	known	silent	c.417	p.T139	0.045	NULL	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6C	HGNC	ENSG00000170465	62	0	0.00	26	3	10.34	-	-	-
KRT78	0	genome.wustl.edu	37	12	53242469	53242470	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	12	53242469	53242470	-	C	INS	KRT78	ENST00000304620	human	ensembl	69_37n	-1	known	frame_shift_ins	c.246_245	p.I83fs	1.000:1.000	NULL	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT78	HGNC	ENSG00000170423	65	0	0.00	31	4	11.43	-	-	-
KRT78	0	genome.wustl.edu	37	12	53242469	53242470	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	12	53242469	53242470	-	C	INS	KRT78	ENST00000304620	human	ensembl	69_37n	-1	known	frame_shift_ins	c.246_245	p.I83fs	1.000:1.000	NULL	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT78	HGNC	ENSG00000170423	33	0	0.00	31	4	11.43	-	-	-
LRP1	0	genome.wustl.edu	37	12	57560722	57560723	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	12	57560722	57560723	-	C	INS	LRP1	ENST00000243077	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2807_2808	p.N939fs	1.000:1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	47	0	0.00	25	3	10.71	-	-	-
LRRC16B	0	genome.wustl.edu	37	14	24534217	24534218	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	14	24534217	24534218	-	C	INS	LRRC16B	ENST00000342740	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3131_3132	p.P1045fs	1.000:1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	62	0	0.00	25	15	37.50	-	-	-
LRRC16B	0	genome.wustl.edu	37	14	24534217	24534218	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	14	24534217	24534218	-	C	INS	LRRC16B	ENST00000342740	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3131_3132	p.P1045fs	1.000:1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	34	0	0.00	25	15	37.50	-	-	-
MCAT	0	genome.wustl.edu	37	22	43533197	43533197	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	22	43533197	43533197	C	A	SNP	MCAT	ENST00000290429	human	ensembl	69_37n	-1	known	missense	c.619	p.A207S	1.000	pfam_Acyl_transferase,superfamily_Acyl_Trfase/lysoPLipase,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_acyl_transferase	pfam_Acyl_transferase,superfamily_Acyl_Trfase/lysoPLipase,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_acyl_transferase	-	no_errors	MCAT	HGNC	ENSG00000100294	193	0	0.00	39	30	43.48	-	-	-
MCAT	0	genome.wustl.edu	37	22	43533197	43533197	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	22	43533197	43533197	C	A	SNP	MCAT	ENST00000290429	human	ensembl	69_37n	-1	known	missense	c.619	p.A207S	1.000	pfam_Acyl_transferase,superfamily_Acyl_Trfase/lysoPLipase,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_acyl_transferase	pfam_Acyl_transferase,superfamily_Acyl_Trfase/lysoPLipase,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_acyl_transferase	-	no_errors	MCAT	HGNC	ENSG00000100294	62	0	0.00	39	30	43.48	-	-	-
MEIS2	0	genome.wustl.edu	37	15	37184562	37184562	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	15	37184562	37184562	G	A	SNP	MEIS2	ENST00000561208	human	ensembl	69_37n	-1	known	missense	c.1246	p.P416S	1.000	NULL	pfam_Homeodomain,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	MEIS2	HGNC	ENSG00000134138	415	0	0.00	264	55	17.24	-	-	-
MEIS2	0	genome.wustl.edu	37	15	37184562	37184562	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	15	37184562	37184562	G	A	SNP	MEIS2	ENST00000561208	human	ensembl	69_37n	-1	known	missense	c.1246	p.P416S	1.000	NULL	pfam_Homeodomain,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	MEIS2	HGNC	ENSG00000134138	358	0	0.00	264	55	17.24	-	-	-
OGT	0	genome.wustl.edu	37	X	70767782	70767782	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	X	70767782	70767782	C	T	SNP	OGT	ENST00000373719	human	ensembl	69_37n	+1	known	missense	c.557	p.T186M	1.000	pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	OGT	HGNC	ENSG00000147162	327	0	0.00	194	120	38.22	-	-	-
OGT	0	genome.wustl.edu	37	X	70767782	70767782	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	X	70767782	70767782	C	T	SNP	OGT	ENST00000373719	human	ensembl	69_37n	+1	known	missense	c.557	p.T186M	1.000	pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	OGT	HGNC	ENSG00000147162	226	0	0.00	194	120	38.22	-	-	-
OR2T2	0	genome.wustl.edu	37	1	248616883	248616883	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	1	248616883	248616883	T	A	SNP	OR2T2	ENST00000342927	human	ensembl	69_37n	+1	known	missense	c.785	p.L262Q	0.339	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240	71	0	0.00	38	13	25.49	-	-	-
PCDHA8	0	genome.wustl.edu	37	5	140222893	140222893	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	5	140222893	140222893	G	A	SNP	PCDHA8	ENST00000531613	human	ensembl	69_37n	+1	known	missense	c.1987	p.A663T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962	111	0	0.00	21	10	32.26	-	-	-
PCDHA8	0	genome.wustl.edu	37	5	140222893	140222893	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	5	140222893	140222893	G	A	SNP	PCDHA8	ENST00000531613	human	ensembl	69_37n	+1	known	missense	c.1987	p.A663T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962	42	0	0.00	21	10	32.26	-	-	-
PCDHB18	0	genome.wustl.edu	37	5	140616046	140616046	+	RNA	DEL	G	G	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	5	140616046	140616046	G	-	DEL	PCDHB18	ENST00000526308	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.088	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001	66	0	0.00	25	13	34.21	-	-	-
PCDHB18	0	genome.wustl.edu	37	5	140616046	140616046	+	RNA	DEL	G	G	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	5	140616046	140616046	G	-	DEL	PCDHB18	ENST00000526308	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.088	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001	31	0	0.00	25	13	34.21	-	-	-
PDE4DIP	0	genome.wustl.edu	37	1	144904729	144904729	+	Silent	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	1	144904729	144904729	C	T	SNP	PDE4DIP	ENST00000369356	human	ensembl	69_37n	-1	known	silent	c.2583	p.L861	1.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	548	0	0.00	381	118	23.60	-	-	-
PDE4DIP	0	genome.wustl.edu	37	1	144904729	144904729	+	Silent	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	1	144904729	144904729	C	T	SNP	PDE4DIP	ENST00000369356	human	ensembl	69_37n	-1	known	silent	c.2583	p.L861	1.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	347	0	0.00	381	118	23.60	-	-	-
PDZD2	0	genome.wustl.edu	37	5	32088295	32088295	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	5	32088295	32088295	C	T	SNP	PDZD2	ENST00000282493	human	ensembl	69_37n	+1	known	missense	c.4741	p.R1581C	0.808	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	135	1	0.74	95	16	14.41	-	-	-
PDZD2	0	genome.wustl.edu	37	5	32088295	32088295	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	5	32088295	32088295	C	T	SNP	PDZD2	ENST00000282493	human	ensembl	69_37n	+1	known	missense	c.4741	p.R1581C	0.808	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	123	0	0.00	95	16	14.41	-	-	-
PILRB	0	genome.wustl.edu	37	7	99956647	99956647	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	7	99956647	99956647	A	-	DEL	PILRB	ENST00000448382	human	ensembl	69_37n	+1	known	frame_shift_del	c.556	p.I186fs	0.000	NULL	NULL	-	no_errors	PILRB	HGNC	ENSG00000121716	134	0	0.00	59	31	34.44	-	-	-
PILRB	0	genome.wustl.edu	37	7	99956647	99956647	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	7	99956647	99956647	A	-	DEL	PILRB	ENST00000448382	human	ensembl	69_37n	+1	known	frame_shift_del	c.556	p.I186fs	0.000	NULL	NULL	-	no_errors	PILRB	HGNC	ENSG00000121716	79	0	0.00	59	31	34.44	-	-	-
PIWIL1	0	genome.wustl.edu	37	12	130833872	130833872	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	12	130833872	130833872	C	T	SNP	PIWIL1	ENST00000245255	human	ensembl	69_37n	+1	known	nonsense	c.823	p.R275*	0.975	superfamily_PAZ	pfam_Piwi,pfam_PAZ,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	96	0	0.00	60	9	13.04	-	-	-
PIWIL1	0	genome.wustl.edu	37	12	130833872	130833872	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	12	130833872	130833872	C	T	SNP	PIWIL1	ENST00000245255	human	ensembl	69_37n	+1	known	nonsense	c.823	p.R275*	0.975	superfamily_PAZ	pfam_Piwi,pfam_PAZ,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	68	0	0.00	60	9	13.04	-	-	-
POGK	0	genome.wustl.edu	37	1	166819226	166819226	+	Silent	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	1	166819226	166819226	G	A	SNP	POGK	ENST00000367875	human	ensembl	69_37n	+1	known	silent	c.1410	p.L470	0.220	pfam_DDE_SF_endonuclease_CENPB-like	pfam_DDE_SF_endonuclease_CENPB-like,pfam_Brinker_DNA-bd,pfam_HTH_CenpB_DNA-bd_dom,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,superfamily_Homeodomain-like,smart_Krueppel-associated_box,smart_HTH_CenpB_DNA-bd_dom,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	POGK	HGNC	ENSG00000143157	80	0	0.00	35	41	53.95	-	-	-
POGK	0	genome.wustl.edu	37	1	166819226	166819226	+	Silent	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	1	166819226	166819226	G	A	SNP	POGK	ENST00000367875	human	ensembl	69_37n	+1	known	silent	c.1410	p.L470	0.220	pfam_DDE_SF_endonuclease_CENPB-like	pfam_DDE_SF_endonuclease_CENPB-like,pfam_Brinker_DNA-bd,pfam_HTH_CenpB_DNA-bd_dom,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,superfamily_Homeodomain-like,smart_Krueppel-associated_box,smart_HTH_CenpB_DNA-bd_dom,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	POGK	HGNC	ENSG00000143157	81	0	0.00	35	41	53.95	-	-	-
POLQ	0	genome.wustl.edu	37	3	121207015	121207015	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	3	121207015	121207015	G	A	SNP	POLQ	ENST00000264233	human	ensembl	69_37n	-1	known	missense	c.4763	p.P1588L	0.001	NULL	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341	324	0	0.00	276	51	15.60	-	-	-
POLQ	0	genome.wustl.edu	37	3	121207015	121207015	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	3	121207015	121207015	G	A	SNP	POLQ	ENST00000264233	human	ensembl	69_37n	-1	known	missense	c.4763	p.P1588L	0.001	NULL	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341	419	0	0.00	276	51	15.60	-	-	-
PPP3CB	0	genome.wustl.edu	37	10	75204476	75204476	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	10	75204476	75204476	T	A	SNP	PPP3CB	ENST00000394822	human	ensembl	69_37n	-1	known	missense	c.1427	p.D476V	1.000	NULL	pfam_Metallo_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP3CB	HGNC	ENSG00000107758	71	0	0.00	34	17	33.33	-	-	-
PPP3CB	0	genome.wustl.edu	37	10	75204476	75204476	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	10	75204476	75204476	T	A	SNP	PPP3CB	ENST00000394822	human	ensembl	69_37n	-1	known	missense	c.1427	p.D476V	1.000	NULL	pfam_Metallo_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP3CB	HGNC	ENSG00000107758	52	0	0.00	34	17	33.33	-	-	-
PROSER1	0	genome.wustl.edu	37	13	39587641	39587641	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	13	39587641	39587641	C	A	SNP	PROSER1	ENST00000350125	human	ensembl	69_37n	-1	known	missense	c.1682	p.R561L	0.001	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685	220	1	0.45	88	45	33.83	-	-	-
PROSER1	0	genome.wustl.edu	37	13	39587641	39587641	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	13	39587641	39587641	C	A	SNP	PROSER1	ENST00000350125	human	ensembl	69_37n	-1	known	missense	c.1682	p.R561L	0.001	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685	237	0	0.00	88	45	33.83	-	-	-
PTHLH	0	genome.wustl.edu	37	12	28114898	28114898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	12	28114898	28114898	T	-	DEL	PTHLH	ENST00000354417	human	ensembl	69_37n	-1	known	frame_shift_del	c.557	p.K186fs	0.135	NULL	pfam_PTH/PTH-rel,smart_PTH/PTH-rel	-	no_errors	PTHLH	HGNC	ENSG00000087494	35	0	0.00	32	4	10.81	-	-	-
PTPRD	0	genome.wustl.edu	37	9	8341726	8341726	+	Silent	SNP	T	T	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	9	8341726	8341726	T	G	SNP	PTPRD	ENST00000356435	human	ensembl	69_37n	-1	known	silent	c.4914	p.G1638	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	593	0	0.00	316	77	19.54	-	-	-
PTPRD	0	genome.wustl.edu	37	9	8341726	8341726	+	Silent	SNP	T	T	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	9	8341726	8341726	T	G	SNP	PTPRD	ENST00000356435	human	ensembl	69_37n	-1	known	silent	c.4914	p.G1638	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	403	0	0.00	316	77	19.54	-	-	-
PTPRD	0	genome.wustl.edu	37	9	8341727	8341727	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	9	8341727	8341727	C	G	SNP	PTPRD	ENST00000356435	human	ensembl	69_37n	-1	known	missense	c.4913	p.G1638A	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	591	1	0.17	315	78	19.85	-	-	-
PTPRD	0	genome.wustl.edu	37	9	8341727	8341727	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	9	8341727	8341727	C	G	SNP	PTPRD	ENST00000356435	human	ensembl	69_37n	-1	known	missense	c.4913	p.G1638A	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	401	0	0.00	315	78	19.85	-	-	-
RPS6KA1	0	genome.wustl.edu	37	1	26885381	26885381	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	1	26885381	26885381	G	A	SNP	RPS6KA1	ENST00000531382	human	ensembl	69_37n	+1	known	missense	c.1195	p.D399N	0.986	pirsf_Ribosomal_S6_kinase_II	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA1	HGNC	ENSG00000117676	71	0	0.00	14	8	36.36	-	-	-
RPS6KA1	0	genome.wustl.edu	37	1	26885381	26885381	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	1	26885381	26885381	G	A	SNP	RPS6KA1	ENST00000531382	human	ensembl	69_37n	+1	known	missense	c.1195	p.D399N	0.986	pirsf_Ribosomal_S6_kinase_II	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA1	HGNC	ENSG00000117676	17	0	0.00	14	8	36.36	-	-	-
SH3PXD2A	0	genome.wustl.edu	37	10	105484097	105484098	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	10	105484097	105484098	-	G	INS	SH3PXD2A	ENST00000369774	human	ensembl	69_37n	-1	known	frame_shift_ins	c.329_328	p.H110fs	1.000:0.989	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2A	HGNC	ENSG00000107957	15	0	0.00	26	6	18.75	-	-	-
SPP2	0	genome.wustl.edu	37	2	234959496	234959496	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	2	234959496	234959496	G	T	SNP	SPP2	ENST00000168148	human	ensembl	69_37n	+1	known	missense	c.66	p.M22I	0.000	NULL	pfam_Spp-24,pfam_Prot_inh_cystat	-	no_errors	SPP2	HGNC	ENSG00000072080	384	1	0.26	128	65	33.68	-	-	-
SPP2	0	genome.wustl.edu	37	2	234959496	234959496	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	2	234959496	234959496	G	T	SNP	SPP2	ENST00000168148	human	ensembl	69_37n	+1	known	missense	c.66	p.M22I	0.000	NULL	pfam_Spp-24,pfam_Prot_inh_cystat	-	no_errors	SPP2	HGNC	ENSG00000072080	285	0	0.00	128	65	33.68	-	-	-
SSH1	0	genome.wustl.edu	37	12	109182866	109182867	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	12	109182866	109182867	AG	-	DEL	SSH1	ENST00000326495	human	ensembl	69_37n	-1	known	frame_shift_del	c.2048_2047	p.L683fs	1.000:1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH1	HGNC	ENSG00000084112	48	0	0.00	11	12	48.00	-	-	-
SSH1	0	genome.wustl.edu	37	12	109182866	109182867	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	12	109182866	109182867	AG	-	DEL	SSH1	ENST00000326495	human	ensembl	69_37n	-1	known	frame_shift_del	c.2048_2047	p.L683fs	1.000:1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH1	HGNC	ENSG00000084112	24	0	0.00	11	12	48.00	-	-	-
TBP	0	genome.wustl.edu	37	6	170871052	170871052	+	Silent	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	6	170871052	170871052	G	A	SNP	TBP	ENST00000230354	human	ensembl	69_37n	+1	known	silent	c.228	p.Q76	0.994	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	50	0	0.00	57	10	14.93	-	-	-
TRADD	0	genome.wustl.edu	37	16	67190457	67190458	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	16	67190457	67190458	-	G	INS	TRADD	ENST00000345057	human	ensembl	69_37n	-1	known	frame_shift_ins	c.107_106	p.Q36fs	0.953:0.685	superfamily_TRADD_N	pfam_TRADD_N,pfam_Death,superfamily_TRADD_N,superfamily_DEATH-like,smart_Death,pfscan_Death	-	no_errors	TRADD	HGNC	ENSG00000102871	168	0	0.00	15	2	11.76	-	-	-
TRADD	0	genome.wustl.edu	37	16	67190457	67190458	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	16	67190457	67190458	-	G	INS	TRADD	ENST00000345057	human	ensembl	69_37n	-1	known	frame_shift_ins	c.107_106	p.Q36fs	0.953:0.685	superfamily_TRADD_N	pfam_TRADD_N,pfam_Death,superfamily_TRADD_N,superfamily_DEATH-like,smart_Death,pfscan_Death	-	no_errors	TRADD	HGNC	ENSG00000102871	32	0	0.00	15	2	11.76	-	-	-
TRIM24	0	genome.wustl.edu	37	7	138189074	138189074	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	7	138189074	138189074	C	G	SNP	TRIM24	ENST00000343526	human	ensembl	69_37n	+1	known	missense	c.404	p.A135G	1.000	NULL	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	TRIM24	HGNC	ENSG00000122779	250	0	0.00	257	79	23.51	-	-	-
TRIM24	0	genome.wustl.edu	37	7	138189074	138189074	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	7	138189074	138189074	C	G	SNP	TRIM24	ENST00000343526	human	ensembl	69_37n	+1	known	missense	c.404	p.A135G	1.000	NULL	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	TRIM24	HGNC	ENSG00000122779	324	0	0.00	257	79	23.51	-	-	-
VPS18	0	genome.wustl.edu	37	15	41192326	41192326	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	15	41192326	41192326	G	A	SNP	VPS18	ENST00000220509	human	ensembl	69_37n	+1	known	missense	c.1310	p.R437H	0.968	superfamily_ARM-type_fold	pfam_Pep3_Vps18,pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold	-	no_errors	VPS18	HGNC	ENSG00000104142	83	0	0.00	26	13	33.33	-	-	-
VPS18	0	genome.wustl.edu	37	15	41192326	41192326	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	15	41192326	41192326	G	A	SNP	VPS18	ENST00000220509	human	ensembl	69_37n	+1	known	missense	c.1310	p.R437H	0.968	superfamily_ARM-type_fold	pfam_Pep3_Vps18,pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold	-	no_errors	VPS18	HGNC	ENSG00000104142	48	0	0.00	26	13	33.33	-	-	-
WDYHV1	0	genome.wustl.edu	37	8	124448694	124448694	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	8	124448694	124448694	A	T	SNP	WDYHV1	ENST00000287387	human	ensembl	69_37n	+1	known	missense	c.236	p.D79V	1.000	pfam_Prot_N_Gln_amidohydro_ab_roll	pfam_Prot_N_Gln_amidohydro_ab_roll	-	no_errors	WDYHV1	HGNC	ENSG00000156795	153	0	0.00	131	15	10.27	-	-	-
WDYHV1	0	genome.wustl.edu	37	8	124448694	124448694	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	8	124448694	124448694	A	T	SNP	WDYHV1	ENST00000287387	human	ensembl	69_37n	+1	known	missense	c.236	p.D79V	1.000	pfam_Prot_N_Gln_amidohydro_ab_roll	pfam_Prot_N_Gln_amidohydro_ab_roll	-	no_errors	WDYHV1	HGNC	ENSG00000156795	69	0	0.00	131	15	10.27	-	-	-
WLS	0	genome.wustl.edu	37	1	68624838	68624838	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	1	68624838	68624838	G	C	SNP	WLS	ENST00000540432	human	ensembl	69_37n	-1	known	missense	c.472	p.R158G	0.915	NULL	NULL	-	no_errors	WLS	HGNC	ENSG00000116729	152	0	0.00	89	22	19.82	-	-	-
WLS	0	genome.wustl.edu	37	1	68624838	68624838	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	1	68624838	68624838	G	C	SNP	WLS	ENST00000540432	human	ensembl	69_37n	-1	known	missense	c.472	p.R158G	0.915	NULL	NULL	-	no_errors	WLS	HGNC	ENSG00000116729	215	0	0.00	89	22	19.82	-	-	-
ZNF142	0	genome.wustl.edu	37	2	219507935	219507935	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	635d1b45-ef87-457e-9ea9-bd97f6ee70c0	2	219507935	219507935	C	-	DEL	ZNF142	ENST00000411696	human	ensembl	69_37n	-1	known	frame_shift_del	c.3304	p.A1102fs	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568	60	0	0.00	35	23	35.38	-	-	-
ZNF142	0	genome.wustl.edu	37	2	219507935	219507935	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	2	219507935	219507935	C	-	DEL	ZNF142	ENST00000411696	human	ensembl	69_37n	-1	known	frame_shift_del	c.3304	p.A1102fs	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568	64	0	0.00	35	23	35.38	-	-	-
ZNF296	0	genome.wustl.edu	37	19	45575384	45575384	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	19	45575384	45575384	T	-	DEL	ZNF296	ENST00000303809	human	ensembl	69_37n	-1	known	frame_shift_del	c.903	p.A302fs	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF296	HGNC	ENSG00000170684	14	0	0.00	4	3	42.86	-	-	-
ZNF296	0	genome.wustl.edu	37	19	45575390	45575391	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-BH-A0AY-01A-21W-A019-09	TCGA-BH-A0AY-11A-23W-A100-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	16ae1ccf-0a1e-4a67-9cbe-d0746ee68dac	b19708f5-7d3a-499f-90fd-3918aaff30c0	19	45575390	45575391	GG	-	DEL	ZNF296	ENST00000303809	human	ensembl	69_37n	-1	known	frame_shift_del	c.897_896	p.A299fs	0.350:0.773	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF296	HGNC	ENSG00000170684	10	0	0.00	4	3	42.86	-	-	-
