Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTL6B	0	genome.wustl.edu	37	7	100245130	100245131	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	7	100245130	100245131	-	G	INS	ACTL6B	ENST00000160382	human	ensembl	69_37n	-1	known	frame_shift_ins	c.696_695	p.N233fs	1.000:1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTL6B	HGNC	ENSG00000077080	43	0	0.00	28	4	12.50	-	-	-
ANKRD55	0	genome.wustl.edu	37	5	55407411	55407411	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	5	55407411	55407411	G	A	SNP	ANKRD55	ENST00000505970	human	ensembl	69_37n	-1	putative	missense	c.398	p.S133L	0.945	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_stop_codon:bad_bp_length_for_coding_region	ANKRD55	HGNC	ENSG00000164512	198	0	0.00	338	88	20.56	-	-	-
C10orf32	0	genome.wustl.edu	37	10	104614108	104614108	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	10	104614108	104614108	C	T	SNP	C10orf32	ENST00000299353	human	ensembl	69_37n	+1	known	missense	c.65	p.T22M	1.000	NULL	NULL	-	no_errors	C10orf32	HGNC	ENSG00000166275	27	0	0.00	47	15	24.19	-	-	-
C4orf40	0	genome.wustl.edu	37	4	71024261	71024261	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	4	71024261	71024261	C	T	SNP	C4orf40	ENST00000344526	human	ensembl	69_37n	+1	known	nonsense	c.292	p.Q98*	0.000	NULL	NULL	-	no_errors	C4orf40	HGNC	ENSG00000187533	285	0	0.00	363	202	35.75	-	-	-
CAND2	0	genome.wustl.edu	37	3	12845079	12845080	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	3	12845079	12845080	-	G	INS	CAND2	ENST00000456430	human	ensembl	69_37n	+1	known	frame_shift_ins	c.161_162	p.R55fs	0.997:0.545	superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND2	HGNC	ENSG00000144712	59	0	0.00	13	6	31.58	-	-	-
CHD6	0	genome.wustl.edu	37	20	40179966	40179966	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	20	40179966	40179966	T	G	SNP	CHD6	ENST00000373233	human	ensembl	69_37n	-1	known	missense	c.11	p.K4T	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177	238	0	0.00	222	76	25.50	-	-	-
CTAGE5	0	genome.wustl.edu	37	14	39777695	39777695	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	14	39777695	39777695	C	T	SNP	CTAGE5	ENST00000396158	human	ensembl	69_37n	+1	known	missense	c.1112	p.S371L	1.000	NULL	NULL	-	no_errors	CTAGE5	HGNC	ENSG00000150527	62	0	0.00	121	19	13.57	-	-	-
CTTNBP2	0	genome.wustl.edu	37	7	117420559	117420559	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	7	117420559	117420559	T	C	SNP	CTTNBP2	ENST00000160373	human	ensembl	69_37n	-1	known	missense	c.2459	p.N820S	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Cortactin-binding_p2_N,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CTTNBP2	HGNC	ENSG00000077063	278	0	0.00	354	57	13.87	-	-	-
DUSP6	0	genome.wustl.edu	37	12	89745744	89745744	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	12	89745744	89745744	C	T	SNP	DUSP6	ENST00000279488	human	ensembl	69_37n	-1	known	missense	c.73	p.E25K	1.000	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,prints_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	DUSP6	HGNC	ENSG00000139318	9	0	0.00	7	4	36.36	-	-	-
EEA1	0	genome.wustl.edu	37	12	93205078	93205078	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	12	93205078	93205078	C	T	SNP	EEA1	ENST00000322349	human	ensembl	69_37n	-1	known	missense	c.2176	p.E726K	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Znf_C2H2	-	no_errors	EEA1	HGNC	ENSG00000102189	63	0	0.00	87	35	28.69	-	-	-
EEF2	0	genome.wustl.edu	37	19	3982347	3982347	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	19	3982347	3982347	C	T	SNP	EEF2	ENST00000309311	human	ensembl	69_37n	-1	known	missense	c.688	p.E230K	1.000	pfam_ProtSyn_GTP-bd	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFG/EF2_IV,pfam_Transl_elong_EFG/EF2_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_elong_init/rib_B-barrel,superfamily_Elongation_fac_G/III/V,smart_Transl_elong_EFG/EF2_IV,smart_Transl_elong_EFG/EF2_C,prints_ProtSyn_GTP-bd,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658	88	0	0.00	39	20	33.90	-	-	-
ENPP1	0	genome.wustl.edu	37	6	132207790	132207790	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	6	132207790	132207790	C	T	SNP	ENPP1	ENST00000360971	human	ensembl	69_37n	+1	known	missense	c.2533	p.P845S	0.986	pfam_DNA/RNA_non-sp_Endonuclease,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENPP1	HGNC	ENSG00000197594	115	0	0.00	276	70	20.23	-	-	-
ETV4	0	genome.wustl.edu	37	17	41610700	41610701	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	17	41610700	41610701	-	G	INS	ETV4	ENST00000319349	human	ensembl	69_37n	-1	known	frame_shift_ins	c.400_399	p.R133fs	1.000:1.000	pfam_ETS_PEA3_N	pfam_ETS_PEA3_N,pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ETV4	HGNC	ENSG00000175832	36	0	0.00	27	5	15.62	-	-	-
FAM114A2	0	genome.wustl.edu	37	5	153372571	153372571	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	5	153372571	153372571	C	T	SNP	FAM114A2	ENST00000351797	human	ensembl	69_37n	-1	known	missense	c.1483	p.E495K	0.441	NULL	pfam_DUF719	-	no_errors	FAM114A2	HGNC	ENSG00000055147	201	0	0.00	450	146	24.50	-	-	-
FAM174B	0	genome.wustl.edu	37	15	93198621	93198621	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	15	93198621	93198621	G	A	SNP	FAM174B	ENST00000327355	human	ensembl	69_37n	-1	known	missense	c.269	p.T90I	1.000	pfam_DUF1180	pfam_DUF1180	-	no_errors	FAM174B	HGNC	ENSG00000185442	16	0	0.00	10	6	37.50	-	-	-
FAM83A	0	genome.wustl.edu	37	8	124195351	124195351	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	8	124195351	124195351	G	-	DEL	FAM83A	ENST00000318462	human	ensembl	69_37n	+1	known	frame_shift_del	c.255	p.G86fs	0.000	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83A	HGNC	ENSG00000147689	18	0	0.00	17	3	14.29	-	-	-
FMN2	0	genome.wustl.edu	37	1	240256070	240256070	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	240256070	240256070	C	T	SNP	FMN2	ENST00000319653	human	ensembl	69_37n	+1	known	nonsense	c.661	p.Q221*	0.991	NULL	pfam_FH2_actin-bd,pfam_Formin_homology_1,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	9	0	0.00	11	8	42.11	-	-	-
FSD1L	0	genome.wustl.edu	37	9	108226577	108226577	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	9	108226577	108226577	A	T	SNP	FSD1L	ENST00000374716	human	ensembl	69_37n	+1	known	missense	c.76	p.I26F	1.000	superfamily_FH2_actin-bd,smart_Bbox_C	superfamily_FH2_actin-bd,smart_Bbox_C	-	no_errors	FSD1L	HGNC	ENSG00000106701	140	0	0.00	89	12	11.88	-	-	-
GAGE13	0	genome.wustl.edu	37	X	49192769	49192769	+	Silent	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	X	49192769	49192769	G	A	SNP	GAGE13	ENST00000381751	human	ensembl	69_37n	+1	known	silent	c.282	p.G94	0.001	pfam_GAGE	pfam_GAGE	-	no_errors	GAGE13	HGNC	ENSG00000237597	44	0	0.00	64	20	23.81	-	-	-
GLYR1	0	genome.wustl.edu	37	16	4862228	4862229	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	16	4862228	4862229	-	C	INS	GLYR1	ENST00000321919	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1141_1140	p.R380fs	0.990:0.170	pfam_6PGDH_NADP-bd	pfam_6PGDH_NADP-bd,pfam_PWWP,pfam_NADP_OxRdtase_F420,superfamily_6-PGluconate_DH_C-like,smart_PWWP,pfscan_PWWP	-	no_errors	GLYR1	HGNC	ENSG00000140632	38	0	0.00	77	9	10.47	-	-	-
GNE	0	genome.wustl.edu	37	9	36217505	36217505	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	9	36217505	36217505	T	C	SNP	GNE	ENST00000396594	human	ensembl	69_37n	-1	known	missense	c.2119	p.I707V	0.996	NULL	pfam_UDP_GlcNAc_Epimerase_2,pfam_ROK,prints_Hexokinase,tigrfam_UDP-GlcNAc_Epase	-	no_errors	GNE	HGNC	ENSG00000159921	91	0	0.00	231	91	28.26	-	-	-
GOLGA6L5	0	genome.wustl.edu	37	15	85053188	85053188	+	RNA	SNP	C	C	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	15	85053188	85053188	C	G	SNP	GOLGA6L5	ENST00000414190	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	GOLGA6L5	HGNC	ENSG00000230373	26	0	0.00	12	10	45.45	-	-	-
HDAC2	0	genome.wustl.edu	37	6	114274557	114274557	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	6	114274557	114274557	C	T	SNP	HDAC2	ENST00000398283	human	ensembl	69_37n	-1	known	missense	c.805	p.D269N	1.000	pfam_His_deacetylse_dom,prints_His_deacetylse	pfam_His_deacetylse_dom,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC2	HGNC	ENSG00000196591	147	0	0.00	162	33	16.92	-	-	-
HECTD4	0	genome.wustl.edu	37	12	112600859	112600860	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	12	112600859	112600860	-	G	INS	HECTD4	ENST00000377560	human	ensembl	69_37n	-1	known	frame_shift_ins	c.12591_12590	p.D4198fs	0.555:1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	25	0	0.00	45	5	10.00	-	-	-
HRG	0	genome.wustl.edu	37	3	186395388	186395388	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	3	186395388	186395388	G	A	SNP	HRG	ENST00000232003	human	ensembl	69_37n	+1	known	missense	c.1294	p.G432S	0.110	NULL	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	HRG	HGNC	ENSG00000113905	81	0	0.00	591	109	15.57	-	-	-
JAG1	0	genome.wustl.edu	37	20	10627609	10627609	+	Silent	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	20	10627609	10627609	G	A	SNP	JAG1	ENST00000254958	human	ensembl	69_37n	-1	known	silent	c.1863	p.F621	1.000	pfam_EGF_extracell,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	pfam_EGF-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd,smart_DSL,smart_EGF-like,smart_EGF-like_Ca-bd,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	JAG1	HGNC	ENSG00000101384	116	0	0.00	70	49	41.18	-	-	-
JPH4	0	genome.wustl.edu	37	14	24040435	24040436	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	14	24040435	24040436	-	C	INS	JPH4	ENST00000356300	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1505_1504	p.A502fs	0.051:0.057	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH4	HGNC	ENSG00000092051	26	0	0.00	73	9	10.98	-	-	-
KIAA1522	0	genome.wustl.edu	37	1	33236015	33236015	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	33236015	33236015	C	G	SNP	KIAA1522	ENST00000401073	human	ensembl	69_37n	+1	known	missense	c.1235	p.S412C	1.000	NULL	NULL	-	no_errors	KIAA1522	HGNC	ENSG00000162522	23	0	0.00	60	12	16.67	-	-	-
KPRP	0	genome.wustl.edu	37	1	152733184	152733184	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	152733184	152733184	G	A	SNP	KPRP	ENST00000368773	human	ensembl	69_37n	+1	known	missense	c.1120	p.V374I	0.000	NULL	NULL	-	no_errors	KPRP	HGNC	ENSG00000203786	54	0	0.00	218	81	27.09	-	-	-
LAMTOR2	0	genome.wustl.edu	37	1	156025183	156025184	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	156025183	156025184	-	G	INS	LAMTOR2	ENST00000368302	human	ensembl	69_37n	+1	known	frame_shift_ins	c.198_199	p.D66fs	1.000:1.000	pfam_Dynein_light-rel,smart_Dynein_light-rel	pfam_Dynein_light-rel,smart_Dynein_light-rel	-	no_errors	LAMTOR2	HGNC	ENSG00000116586	74	0	0.00	60	55	47.83	-	-	-
LIN28A	0	genome.wustl.edu	37	1	26737895	26737895	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	26737895	26737895	C	A	SNP	LIN28A	ENST00000254231	human	ensembl	69_37n	+1	known	missense	c.50	p.A17E	1.000	NULL	pfam_CSP_DNA-bd,pfam_Znf_CCHC,superfamily_NA-bd_OB-fold-like,superfamily_Znf_CCHC,smart_Cold_shock_prot,smart_Znf_CCHC,pfscan_Znf_CCHC,prints_CSP_DNA-bd	-	no_errors	LIN28A	HGNC	ENSG00000131914	12	0	0.00	12	5	29.41	-	-	-
LTBP2	0	genome.wustl.edu	37	14	75017969	75017969	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	14	75017969	75017969	C	T	SNP	LTBP2	ENST00000261978	human	ensembl	69_37n	-1	known	missense	c.1484	p.R495Q	0.994	NULL	pfam_EGF-like_Ca-bd,pfam_TB_dom,pfam_EGF-like_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	LTBP2	HGNC	ENSG00000119681	17	0	0.00	3	5	62.50	-	-	-
PAK6	0	genome.wustl.edu	37	15	40557093	40557094	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	15	40557093	40557094	-	C	INS	PAK6	ENST00000260404	human	ensembl	69_37n	+1	known	frame_shift_ins	c.107_108	p.Q39fs	1.000:0.997	pfam_PAK_box_Rho-bd,smart_PAK_box_Rho-bd	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PAK_box_Rho-bd,superfamily_Kinase-like_dom,smart_PAK_box_Rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_PAK_box_Rho-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PAK6	HGNC	ENSG00000137843	63	0	0.00	15	2	11.76	-	-	-
PAX2	0	genome.wustl.edu	37	10	102509528	102509529	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	10	102509528	102509529	-	G	INS	PAX2	ENST00000370296	human	ensembl	69_37n	+1	known	frame_shift_ins	c.69_70	p.V25fs	1.000:1.000	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,prints_Paired_dom,pfscan_Paired_dom	pfam_Paired_dom,pfam_Pax2_C,superfamily_Homeodomain-like,smart_Paired_dom,prints_Paired_dom,pfscan_Paired_dom	-	no_errors	PAX2	HGNC	ENSG00000075891	22	0	0.00	14	2	12.50	-	-	-
PKD1L3	0	genome.wustl.edu	37	16	72020171	72020171	+	RNA	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	16	72020171	72020171	C	T	SNP	PKD1L3	ENST00000335106	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PKD1L3	HGNC	ENSG00000187008	167	0	0.00	292	70	19.34	-	-	-
POLD2	0	genome.wustl.edu	37	7	44161448	44161448	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	7	44161448	44161448	C	A	SNP	POLD2	ENST00000406581	human	ensembl	69_37n	-1	known	missense	c.205	p.A69S	1.000	NULL	pfam_DNA_pol_alpha/epsilon_bsu	-	no_errors	POLD2	HGNC	ENSG00000106628	70	0	0.00	155	62	28.31	-	-	-
PRSS53	0	genome.wustl.edu	37	16	31098991	31098992	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	16	31098991	31098992	-	G	INS	PRSS53	ENST00000280606	human	ensembl	69_37n	-1	known	frame_shift_ins	c.109_108	p.K36fs	0.015:0.001	superfamily_Pept_cys/ser_Trypsin-like,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	PRSS53	HGNC	ENSG00000151006	44	0	0.00	42	5	10.64	-	-	-
PTPRD	0	genome.wustl.edu	37	9	8518366	8518366	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	9	8518366	8518366	G	A	SNP	PTPRD	ENST00000356435	human	ensembl	69_37n	-1	known	missense	c.1025	p.T342M	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	80	0	0.00	47	29	38.16	-	-	-
RASGRP3	0	genome.wustl.edu	37	2	33749576	33749576	+	Silent	SNP	C	C	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	2	33749576	33749576	C	G	SNP	RASGRP3	ENST00000402538	human	ensembl	69_37n	+1	known	silent	c.768	p.L256	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_DAG/PE-bd	-	no_errors	RASGRP3	HGNC	ENSG00000152689	140	0	0.00	184	56	23.33	-	-	-
RBPJL	0	genome.wustl.edu	37	20	43942234	43942234	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	20	43942234	43942234	C	T	SNP	RBPJL	ENST00000343694	human	ensembl	69_37n	+1	known	missense	c.746	p.T249M	0.984	pfam_Beta-trefoil_DNA-bd_dom,superfamily_Beta-trefoil_DNA-bd_dom	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJL	HGNC	ENSG00000124232	72	0	0.00	280	91	24.53	-	-	-
RIN2	0	genome.wustl.edu	37	20	19955585	19955586	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	20	19955585	19955586	-	C	INS	RIN2	ENST00000255006	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1063_1064	p.P358fs	1.000:0.999	NULL	pfam_VPS9,pfam_Ras-assoc,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN2	HGNC	ENSG00000132669	37	0	0.00	32	4	11.11	-	-	-
RNF14	0	genome.wustl.edu	37	5	141362978	141362978	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	5	141362978	141362978	A	-	DEL	RNF14	ENST00000347642	human	ensembl	69_37n	+1	known	frame_shift_del	c.1097	p.A367fs	1.000	NULL	pfam_RWD-domain,pfam_Znf_C6HC,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,smart_Znf_C6HC,pfscan_RWD-domain,pfscan_Znf_RING	-	no_errors	RNF14	HGNC	ENSG00000013561	112	0	0.00	145	34	18.89	-	-	-
RNF20	0	genome.wustl.edu	37	9	104302598	104302598	+	Silent	SNP	A	A	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	9	104302598	104302598	A	C	SNP	RNF20	ENST00000389120	human	ensembl	69_37n	+1	known	silent	c.243	p.R81	0.988	NULL	superfamily_STAT_TF_coiled-coil,superfamily_Prefoldin,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF20	HGNC	ENSG00000155827	115	0	0.00	310	88	22.11	-	-	-
SAMD9	0	genome.wustl.edu	37	7	92734890	92734890	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	7	92734890	92734890	C	T	SNP	SAMD9	ENST00000379958	human	ensembl	69_37n	-1	known	missense	c.521	p.R174H	0.666	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	172	0	0.00	343	94	21.51	-	-	-
SART3	0	genome.wustl.edu	37	12	108954695	108954695	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	12	108954695	108954695	G	A	SNP	SART3	ENST00000228284	human	ensembl	69_37n	-1	known	missense	c.236	p.S79F	1.000	NULL	pfam_RRM_dom,pfam_LSM_interact,smart_HAT,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SART3	HGNC	ENSG00000075856	110	0	0.00	118	94	44.34	-	-	-
SERPINC1	0	genome.wustl.edu	37	1	173883952	173883952	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	173883952	173883952	C	T	SNP	SERPINC1	ENST00000367698	human	ensembl	69_37n	-1	known	missense	c.147	p.M49I	1.000	superfamily_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINC1	HGNC	ENSG00000117601	71	0	0.00	124	41	24.85	-	-	-
SGOL1	0	genome.wustl.edu	37	3	20216373	20216373	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	3	20216373	20216373	G	A	SNP	SGOL1	ENST00000263753	human	ensembl	69_37n	-1	known	missense	c.650	p.A217V	0.000	NULL	pfam_Shugoshin_N,pfam_Shugoshin_C	-	no_errors	SGOL1	HGNC	ENSG00000129810	189	0	0.00	144	67	31.75	-	-	-
SLC23A2	0	genome.wustl.edu	37	20	4850568	4850569	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	20	4850568	4850569	-	G	INS	SLC23A2	ENST00000338244	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1234_1233	p.I411fs	1.000:0.974	pfam_Xant/urac/vitC	pfam_Xant/urac/vitC	-	no_errors	SLC23A2	HGNC	ENSG00000089057	43	0	0.00	35	4	10.26	-	-	-
SLC35F3	0	genome.wustl.edu	37	1	234454539	234454539	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	234454539	234454539	G	T	SNP	SLC35F3	ENST00000366618	human	ensembl	69_37n	+1	known	missense	c.997	p.A333S	1.000	pfam_DUF914_euk	pfam_DMT,pfam_DUF250,pfam_DUF914_euk	-	no_errors	SLC35F3	HGNC	ENSG00000183780	211	0	0.00	497	130	20.73	-	-	-
SORCS3	0	genome.wustl.edu	37	10	107007042	107007042	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	10	107007042	107007042	G	C	SNP	SORCS3	ENST00000369701	human	ensembl	69_37n	+1	known	missense	c.3058	p.E1020Q	1.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	286	0	0.00	307	77	20.05	-	-	-
SPHKAP	0	genome.wustl.edu	37	2	228884721	228884721	+	Silent	SNP	T	T	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	2	228884721	228884721	T	C	SNP	SPHKAP	ENST00000392056	human	ensembl	69_37n	-1	known	silent	c.849	p.T283	0.001	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	238	0	0.00	235	86	26.79	-	-	-
SPRED3	0	genome.wustl.edu	37	19	38881061	38881062	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	19	38881061	38881062	-	G	INS	SPRED3	ENST00000338502	human	ensembl	69_37n	+1	known	frame_shift_ins	c.119_120	p.A43fs	1.000:1.000	smart_EVH1,pfscan_EVH1	pfam_Sprouty,pfam_EVH1,smart_EVH1,pfscan_EVH1	-	no_errors	SPRED3	HGNC	ENSG00000188766	10	0	0.00	6	4	40.00	-	-	-
SPTLC1	0	genome.wustl.edu	37	9	94817703	94817703	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	9	94817703	94817703	C	A	SNP	SPTLC1	ENST00000262554	human	ensembl	69_37n	-1	known	missense	c.764	p.C255F	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	SPTLC1	HGNC	ENSG00000090054	87	0	0.00	190	64	25.20	-	-	-
TDRD1	0	genome.wustl.edu	37	10	115981122	115981122	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	10	115981122	115981122	C	G	SNP	TDRD1	ENST00000251864	human	ensembl	69_37n	+1	known	missense	c.2777	p.S926C	0.614	NULL	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627	136	0	0.00	165	42	20.29	-	-	-
TMEM132D	0	genome.wustl.edu	37	12	129566471	129566471	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	12	129566471	129566471	C	T	SNP	TMEM132D	ENST00000422113	human	ensembl	69_37n	-1	known	missense	c.1756	p.E586K	0.976	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952	23	0	0.00	38	15	28.30	-	-	-
TMEM151B	0	genome.wustl.edu	37	6	44243324	44243324	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	6	44243324	44243324	C	T	SNP	TMEM151B	ENST00000451188	human	ensembl	69_37n	+1	known	missense	c.761	p.A254V	1.000	NULL	NULL	-	no_errors	TMEM151B	HGNC	ENSG00000178233	28	0	0.00	23	8	25.81	-	-	-
TP53	0	genome.wustl.edu	37	17	7577118	7577118	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	17	7577118	7577118	C	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.820	p.V274F	0.074	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	123	0	0.00	212	119	35.95	-	-	-
TRDN	0	genome.wustl.edu	37	6	123869608	123869608	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	6	123869608	123869608	T	C	SNP	TRDN	ENST00000398178	human	ensembl	69_37n	-1	known	missense	c.382	p.T128A	0.882	pfam_Asp-B-hydro/Triadin_dom	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439	129	0	0.00	124	127	50.60	-	-	-
TRIM49C	0	genome.wustl.edu	37	11	89774444	89774444	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	11	89774444	89774444	G	A	SNP	TRIM49C	ENST00000448984	human	ensembl	69_37n	+1	known	missense	c.1085	p.R362Q	0.013	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM49C	HGNC	ENSG00000204449	112	0	0.00	275	58	17.42	-	-	-
TSHR	0	genome.wustl.edu	37	14	81610007	81610007	+	Silent	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	14	81610007	81610007	C	T	SNP	TSHR	ENST00000298171	human	ensembl	69_37n	+1	known	silent	c.1605	p.L535	0.619	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_TSH_rcpt,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_FSH_rcpt,prints_LSH_rcpt	-	no_errors	TSHR	HGNC	ENSG00000165409	498	0	0.00	1235	466	27.40	-	-	-
UCP1	0	genome.wustl.edu	37	4	141484632	141484632	+	Silent	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	4	141484632	141484632	C	T	SNP	UCP1	ENST00000262999	human	ensembl	69_37n	-1	known	silent	c.366	p.T122	0.096	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling	-	no_errors	UCP1	HGNC	ENSG00000109424	126	0	0.00	177	96	35.16	-	-	-
WIPI1	0	genome.wustl.edu	37	17	66430737	66430737	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	17	66430737	66430737	C	T	SNP	WIPI1	ENST00000262139	human	ensembl	69_37n	-1	known	missense	c.652	p.D218N	0.999	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WIPI1	HGNC	ENSG00000070540	167	0	0.00	126	59	31.89	-	-	-
XIRP2	0	genome.wustl.edu	37	2	168099578	168099578	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	2	168099578	168099578	C	T	SNP	XIRP2	ENST00000295237	human	ensembl	69_37n	+1	known	missense	c.1676	p.S559L	0.996	NULL	pfam_Actin-binding_Xin_repeat,superfamily_FH2_actin-bd	-	no_errors	XIRP2	HGNC	ENSG00000163092	39	0	0.00	45	10	18.18	-	-	-
ZNF238	0	genome.wustl.edu	37	1	244218261	244218261	+	Silent	SNP	G	G	A			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	244218261	244218261	G	A	SNP	ZNF238	ENST00000358704	human	ensembl	69_37n	+1	known	silent	c.1185	p.Q395	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZNF238	HGNC	ENSG00000179456	34	0	0.00	67	24	26.37	-	-	-
ZNF362	0	genome.wustl.edu	37	1	33745932	33745933	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0BR-01A-21W-A12T-09	TCGA-BH-A0BR-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	df82226e-2242-418b-9f5f-0a5e531826a4	9a94cf94-c89a-4460-83de-0574acf85969	1	33745932	33745933	-	C	INS	ZNF362	ENST00000373428	human	ensembl	69_37n	+1	known	frame_shift_ins	c.557_558	p.K189fs	1.000:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF362	HGNC	ENSG00000160094	32	0	0.00	34	5	12.82	-	-	-
