Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABI1	0	genome.wustl.edu	37	10	27040638	27040638	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	10	27040638	27040638	G	A	SNP	ABI1	ENST00000355394	human	ensembl	69_37n	-1	known	missense	c.1243	p.P415S	0.999	superfamily_SH3_domain	pfam_Abl-interactor_HHR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,pfscan_T_SNARE_dom,prints_SH3_domain,prints_p67phox	-	no_errors	ABI1	HGNC	ENSG00000136754	56	0	0.00	63	9	12.50	-	-	-
ABI1	0	genome.wustl.edu	37	10	27040638	27040638	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	10	27040638	27040638	G	A	SNP	ABI1	ENST00000355394	human	ensembl	69_37n	-1	known	missense	c.1243	p.P415S	0.999	superfamily_SH3_domain	pfam_Abl-interactor_HHR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,pfscan_T_SNARE_dom,prints_SH3_domain,prints_p67phox	-	no_errors	ABI1	HGNC	ENSG00000136754	86	0	0.00	63	9	12.50	-	-	-
ACSL1	0	genome.wustl.edu	37	4	185678828	185678828	+	Silent	SNP	C	C	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	4	185678828	185678828	C	T	SNP	ACSL1	ENST00000281455	human	ensembl	69_37n	-1	known	silent	c.1917	p.V639	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL1	HGNC	ENSG00000151726	377	0	0.00	451	113	20.04	-	-	-
ACSL1	0	genome.wustl.edu	37	4	185678828	185678828	+	Silent	SNP	C	C	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	4	185678828	185678828	C	T	SNP	ACSL1	ENST00000281455	human	ensembl	69_37n	-1	known	silent	c.1917	p.V639	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL1	HGNC	ENSG00000151726	643	0	0.00	451	113	20.04	-	-	-
ALDH1A1	0	genome.wustl.edu	37	9	75533714	75533714	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	9	75533714	75533714	C	A	SNP	ALDH1A1	ENST00000297785	human	ensembl	69_37n	-1	known	missense	c.772	p.A258S	1.000	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A1	HGNC	ENSG00000165092	114	0	0.00	106	22	17.19	-	-	-
ALDH1A1	0	genome.wustl.edu	37	9	75533714	75533714	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	9	75533714	75533714	C	A	SNP	ALDH1A1	ENST00000297785	human	ensembl	69_37n	-1	known	missense	c.772	p.A258S	1.000	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A1	HGNC	ENSG00000165092	178	0	0.00	106	22	17.19	-	-	-
ARFGEF2	0	genome.wustl.edu	37	20	47601333	47601333	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	20	47601333	47601333	G	A	SNP	ARFGEF2	ENST00000371917	human	ensembl	69_37n	+1	known	missense	c.2026	p.E676K	1.000	pfam_Sec7,superfamily_Sec7,superfamily_ARM-type_fold,smart_Sec7,pfscan_Sec7	pfam_Sec7,pfam_DUF1981_SEC7_assoc,superfamily_Sec7,superfamily_ARM-type_fold,smart_Sec7,pfscan_Sec7	-	no_errors	ARFGEF2	HGNC	ENSG00000124198	221	0	0.00	756	208	21.58	-	-	-
ARFGEF2	0	genome.wustl.edu	37	20	47601333	47601333	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	20	47601333	47601333	G	A	SNP	ARFGEF2	ENST00000371917	human	ensembl	69_37n	+1	known	missense	c.2026	p.E676K	1.000	pfam_Sec7,superfamily_Sec7,superfamily_ARM-type_fold,smart_Sec7,pfscan_Sec7	pfam_Sec7,pfam_DUF1981_SEC7_assoc,superfamily_Sec7,superfamily_ARM-type_fold,smart_Sec7,pfscan_Sec7	-	no_errors	ARFGEF2	HGNC	ENSG00000124198	139	0	0.00	756	208	21.58	-	-	-
ATP7A	0	genome.wustl.edu	37	X	77244986	77244986	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	X	77244986	77244986	T	C	SNP	ATP7A	ENST00000341514	human	ensembl	69_37n	+1	known	missense	c.868	p.S290P	1.000	pfam_HeavyMe-assoc_HMA,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,tigrfam_HMA_Cu_ion-bd	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,pfam_HAD-SF_hydro-like_3,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_ATPase_P-typ_cat/Cu-transptr,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_H-transp,prints_HG_scavenger,tigrfam_ATPase_P-typ_heavy-metal,tigrfam_ATPase_P-typ_ion-transptr,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7A	HGNC	ENSG00000165240	335	0	0.00	297	56	15.86	-	-	-
ATP7A	0	genome.wustl.edu	37	X	77244986	77244986	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	X	77244986	77244986	T	C	SNP	ATP7A	ENST00000341514	human	ensembl	69_37n	+1	known	missense	c.868	p.S290P	1.000	pfam_HeavyMe-assoc_HMA,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,tigrfam_HMA_Cu_ion-bd	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,pfam_HAD-SF_hydro-like_3,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_ATPase_P-typ_cat/Cu-transptr,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_H-transp,prints_HG_scavenger,tigrfam_ATPase_P-typ_heavy-metal,tigrfam_ATPase_P-typ_ion-transptr,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7A	HGNC	ENSG00000165240	460	1	0.22	297	56	15.86	-	-	-
BHLHB9	0	genome.wustl.edu	37	X	102003966	102003967	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	X	102003966	102003967	-	A	INS	BHLHB9	ENST00000361229	human	ensembl	69_37n	+1	known	frame_shift_ins	c.43_44	p.A18fs	0.000:0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	BHLHB9	HGNC	ENSG00000198908	212	0	0.00	147	22	13.02	-	-	-
BMPR2	0	genome.wustl.edu	37	2	203417447	203417447	+	Silent	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	2	203417447	203417447	G	A	SNP	BMPR2	ENST00000374580	human	ensembl	69_37n	+1	known	silent	c.1422	p.R474	0.992	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217	83	0	0.00	69	39	36.11	-	-	-
BMPR2	0	genome.wustl.edu	37	2	203417447	203417447	+	Silent	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	2	203417447	203417447	G	A	SNP	BMPR2	ENST00000374580	human	ensembl	69_37n	+1	known	silent	c.1422	p.R474	0.992	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217	108	0	0.00	69	39	36.11	-	-	-
BTN3A1	0	genome.wustl.edu	37	6	26406257	26406257	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	6	26406257	26406257	G	C	SNP	BTN3A1	ENST00000289361	human	ensembl	69_37n	+1	known	missense	c.206	p.S69T	0.001	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like,prints_Butyrophylin	-	no_errors	BTN3A1	HGNC	ENSG00000026950	154	0	0.00	75	20	21.05	-	-	-
BTN3A1	0	genome.wustl.edu	37	6	26406257	26406257	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	6	26406257	26406257	G	C	SNP	BTN3A1	ENST00000289361	human	ensembl	69_37n	+1	known	missense	c.206	p.S69T	0.001	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like,prints_Butyrophylin	-	no_errors	BTN3A1	HGNC	ENSG00000026950	119	0	0.00	75	20	21.05	-	-	-
CDK12	0	genome.wustl.edu	37	17	37687471	37687472	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	17	37687471	37687472	-	G	INS	CDK12	ENST00000447079	human	ensembl	69_37n	+1	known	frame_shift_ins	c.4375_4376	p.P1463fs	1.000:1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	60	0	0.00	33	5	13.16	-	-	-
CLCA2	0	genome.wustl.edu	37	1	86919248	86919248	+	Silent	SNP	T	T	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	1	86919248	86919248	T	G	SNP	CLCA2	ENST00000370565	human	ensembl	69_37n	+1	known	silent	c.2352	p.S784	0.961	tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA2	HGNC	ENSG00000137975	182	1	0.54	89	21	19.09	-	-	-
CLCA2	0	genome.wustl.edu	37	1	86919248	86919248	+	Silent	SNP	T	T	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	1	86919248	86919248	T	G	SNP	CLCA2	ENST00000370565	human	ensembl	69_37n	+1	known	silent	c.2352	p.S784	0.961	tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA2	HGNC	ENSG00000137975	145	0	0.00	89	21	19.09	-	-	-
COBLL1	0	genome.wustl.edu	37	2	165551456	165551456	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	2	165551456	165551456	C	T	SNP	COBLL1	ENST00000194871	human	ensembl	69_37n	-1	known	missense	c.2761	p.D921N	0.000	NULL	pfam_Cordon-bleu_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	109	1	0.91	145	37	20.33	-	-	-
COBLL1	0	genome.wustl.edu	37	2	165551456	165551456	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	2	165551456	165551456	C	T	SNP	COBLL1	ENST00000194871	human	ensembl	69_37n	-1	known	missense	c.2761	p.D921N	0.000	NULL	pfam_Cordon-bleu_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	142	0	0.00	145	37	20.33	-	-	-
COL11A2	0	genome.wustl.edu	37	6	33135615	33135615	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	6	33135615	33135615	C	-	DEL	COL11A2	ENST00000341947	human	ensembl	69_37n	-1	known	frame_shift_del	c.3975	p.P1326fs	0.991	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248	39	0	0.00	14	2	12.50	-	-	-
CTRL	0	genome.wustl.edu	37	16	67964902	67964902	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	16	67964902	67964902	C	T	SNP	CTRL	ENST00000574481	human	ensembl	69_37n	-1	known	missense	c.157	p.D53N	0.590	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	CTRL	HGNC	ENSG00000141086	8	0	0.00	7	6	46.15	-	-	-
CTRL	0	genome.wustl.edu	37	16	67964902	67964902	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	16	67964902	67964902	C	T	SNP	CTRL	ENST00000574481	human	ensembl	69_37n	-1	known	missense	c.157	p.D53N	0.590	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	CTRL	HGNC	ENSG00000141086	29	0	0.00	7	6	46.15	-	-	-
DMD	0	genome.wustl.edu	37	X	31950337	31950337	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	X	31950337	31950337	C	G	SNP	DMD	ENST00000357033	human	ensembl	69_37n	-1	known	missense	c.6622	p.E2208Q	1.000	pfam_Spectrin_repeat,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	133	0	0.00	121	20	14.18	-	-	-
DMD	0	genome.wustl.edu	37	X	31950337	31950337	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	X	31950337	31950337	C	G	SNP	DMD	ENST00000357033	human	ensembl	69_37n	-1	known	missense	c.6622	p.E2208Q	1.000	pfam_Spectrin_repeat,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	195	0	0.00	121	20	14.18	-	-	-
DNAJB3	0	genome.wustl.edu	37	2	234652466	234652466	+	RNA	SNP	C	C	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	2	234652466	234652466	C	T	SNP	DNAJB3	ENST00000449667	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	DNAJB3	HGNC	ENSG00000227802	65	0	0.00	33	19	36.54	-	-	-
DNAJB3	0	genome.wustl.edu	37	2	234652466	234652466	+	RNA	SNP	C	C	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	2	234652466	234652466	C	T	SNP	DNAJB3	ENST00000449667	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	DNAJB3	HGNC	ENSG00000227802	86	0	0.00	33	19	36.54	-	-	-
ELK1	0	genome.wustl.edu	37	X	47500696	47500696	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	X	47500696	47500696	G	A	SNP	ELK1	ENST00000247161	human	ensembl	69_37n	-1	known	missense	c.145	p.R49C	1.000	pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ELK1	HGNC	ENSG00000126767	145	0	0.00	52	13	20.00	-	-	-
ELK1	0	genome.wustl.edu	37	X	47500696	47500696	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	X	47500696	47500696	G	A	SNP	ELK1	ENST00000247161	human	ensembl	69_37n	-1	known	missense	c.145	p.R49C	1.000	pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ELK1	HGNC	ENSG00000126767	104	0	0.00	52	13	20.00	-	-	-
FABP9	0	genome.wustl.edu	37	8	82371416	82371416	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	8	82371416	82371416	T	C	SNP	FABP9	ENST00000379071	human	ensembl	69_37n	-1	known	missense	c.230	p.D77G	1.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	FABP9	HGNC	ENSG00000205186	299	0	0.00	213	35	14.11	-	-	-
FABP9	0	genome.wustl.edu	37	8	82371416	82371416	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	8	82371416	82371416	T	C	SNP	FABP9	ENST00000379071	human	ensembl	69_37n	-1	known	missense	c.230	p.D77G	1.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	FABP9	HGNC	ENSG00000205186	192	1	0.52	213	35	14.11	-	-	-
HIVEP2	0	genome.wustl.edu	37	6	143093972	143093972	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	6	143093972	143093972	C	A	SNP	HIVEP2	ENST00000012134	human	ensembl	69_37n	-1	known	missense	c.1904	p.G635V	0.030	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818	92	0	0.00	61	24	28.24	-	-	-
HIVEP2	0	genome.wustl.edu	37	6	143093972	143093972	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	6	143093972	143093972	C	A	SNP	HIVEP2	ENST00000012134	human	ensembl	69_37n	-1	known	missense	c.1904	p.G635V	0.030	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818	153	0	0.00	61	24	28.24	-	-	-
IGHV3-23	0	genome.wustl.edu	37	14	106725468	106725469	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	14	106725468	106725469	-	C	INS	IGHV3-23	ENST00000390609	human	ensembl	69_37n	-1	known	frame_shift_ins	c.84_83	p.G29fs	0.002:0.002	pfam_Ig_V-set	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV3-23	HGNC	ENSG00000211949	398	0	0.00	409	46	10.11	-	-	-
IGHV3-23	0	genome.wustl.edu	37	14	106725468	106725469	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	14	106725468	106725469	-	C	INS	IGHV3-23	ENST00000390609	human	ensembl	69_37n	-1	known	frame_shift_ins	c.84_83	p.G29fs	0.002:0.002	pfam_Ig_V-set	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV3-23	HGNC	ENSG00000211949	407	0	0.00	409	46	10.11	-	-	-
KIAA2022	0	genome.wustl.edu	37	X	73961666	73961666	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	X	73961666	73961666	G	A	SNP	KIAA2022	ENST00000055682	human	ensembl	69_37n	-1	known	missense	c.2726	p.A909V	0.344	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030	364	0	0.00	270	52	16.10	-	-	-
KIAA2022	0	genome.wustl.edu	37	X	73961666	73961666	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	X	73961666	73961666	G	A	SNP	KIAA2022	ENST00000055682	human	ensembl	69_37n	-1	known	missense	c.2726	p.A909V	0.344	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030	377	0	0.00	270	52	16.10	-	-	-
KL	0	genome.wustl.edu	37	13	33634928	33634928	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	13	33634928	33634928	A	G	SNP	KL	ENST00000380099	human	ensembl	69_37n	+1	known	missense	c.1712	p.Y571C	0.937	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	KL	HGNC	ENSG00000133116	82	0	0.00	37	19	33.33	-	-	-
KL	0	genome.wustl.edu	37	13	33634928	33634928	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	13	33634928	33634928	A	G	SNP	KL	ENST00000380099	human	ensembl	69_37n	+1	known	missense	c.1712	p.Y571C	0.937	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	KL	HGNC	ENSG00000133116	111	1	0.89	37	19	33.33	-	-	-
LMOD3	0	genome.wustl.edu	37	3	69168311	69168311	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	3	69168311	69168311	G	A	SNP	LMOD3	ENST00000420581	human	ensembl	69_37n	-1	known	nonsense	c.1195	p.Q399*	1.000	NULL	pfam_Tropomodulin	-	no_errors	LMOD3	HGNC	ENSG00000163380	242	0	0.00	207	38	15.51	-	-	-
LMOD3	0	genome.wustl.edu	37	3	69168311	69168311	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	3	69168311	69168311	G	A	SNP	LMOD3	ENST00000420581	human	ensembl	69_37n	-1	known	nonsense	c.1195	p.Q399*	1.000	NULL	pfam_Tropomodulin	-	no_errors	LMOD3	HGNC	ENSG00000163380	278	0	0.00	207	38	15.51	-	-	-
MAGEB4	0	genome.wustl.edu	37	X	30260727	30260727	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	X	30260727	30260727	G	A	SNP	MAGEB4	ENST00000378982	human	ensembl	69_37n	+1	known	missense	c.475	p.E159K	0.001	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB4	HGNC	ENSG00000120289	81	0	0.00	39	9	18.75	-	-	-
MAGEB4	0	genome.wustl.edu	37	X	30260727	30260727	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	X	30260727	30260727	G	A	SNP	MAGEB4	ENST00000378982	human	ensembl	69_37n	+1	known	missense	c.475	p.E159K	0.001	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB4	HGNC	ENSG00000120289	53	0	0.00	39	9	18.75	-	-	-
MAOA	0	genome.wustl.edu	37	X	43603045	43603046	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	X	43603045	43603046	-	T	INS	MAOA	ENST00000338702	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1267_1268	p.R424fs	0.720:0.922	pfam_Amino_oxidase,prints_Flavin_amine_oxidase	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_mOase_FAD-bd,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_FAD_bind_dom,prints_Flavin_amine_oxidase	-	no_errors	MAOA	HGNC	ENSG00000189221	15	0	0.00	2	2	50.00	-	-	-
MCM4	0	genome.wustl.edu	37	8	48887308	48887308	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	8	48887308	48887308	G	A	SNP	MCM4	ENST00000262105	human	ensembl	69_37n	+1	known	missense	c.2151	p.M717I	1.000	pfam_MCM_DNA-dep_ATPase,smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold-like,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738	235	0	0.00	154	36	18.95	-	-	-
MCM4	0	genome.wustl.edu	37	8	48887308	48887308	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	8	48887308	48887308	G	A	SNP	MCM4	ENST00000262105	human	ensembl	69_37n	+1	known	missense	c.2151	p.M717I	1.000	pfam_MCM_DNA-dep_ATPase,smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold-like,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738	216	0	0.00	154	36	18.95	-	-	-
MUC5B	0	genome.wustl.edu	37	11	1264631	1264631	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	11	1264631	1264631	A	G	SNP	MUC5B	ENST00000447027	human	ensembl	69_37n	+1	known	missense	c.6530	p.N2177S	0.024	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	18	0	0.00	7	6	46.15	-	-	-
NF1	0	genome.wustl.edu	37	17	29685563	29685563	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	17	29685563	29685563	A	G	SNP	NF1	ENST00000358273	human	ensembl	69_37n	+1	known	missense	c.8036	p.N2679S	1.000	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712	178	0	0.00	114	17	12.98	-	-	-
NF1	0	genome.wustl.edu	37	17	29685563	29685563	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	17	29685563	29685563	A	G	SNP	NF1	ENST00000358273	human	ensembl	69_37n	+1	known	missense	c.8036	p.N2679S	1.000	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712	139	0	0.00	114	17	12.98	-	-	-
NOC3L	0	genome.wustl.edu	37	10	96121599	96121599	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	10	96121599	96121599	G	A	SNP	NOC3L	ENST00000371350	human	ensembl	69_37n	-1	known	missense	c.40	p.R14C	1.000	pirsf_Nucleolar_cplx-assoc_3	pfam_CCAAT-binding_factor,pfam_NOC3p,superfamily_ARM-type_fold,pirsf_Nucleolar_cplx-assoc_3	-	no_errors	NOC3L	HGNC	ENSG00000173145	107	0	0.00	108	35	24.31	-	-	-
NOC3L	0	genome.wustl.edu	37	10	96121599	96121599	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	10	96121599	96121599	G	A	SNP	NOC3L	ENST00000371350	human	ensembl	69_37n	-1	known	missense	c.40	p.R14C	1.000	pirsf_Nucleolar_cplx-assoc_3	pfam_CCAAT-binding_factor,pfam_NOC3p,superfamily_ARM-type_fold,pirsf_Nucleolar_cplx-assoc_3	-	no_errors	NOC3L	HGNC	ENSG00000173145	123	0	0.00	108	35	24.31	-	-	-
OBFC1	0	genome.wustl.edu	37	10	105664860	105664860	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	10	105664860	105664860	T	C	SNP	OBFC1	ENST00000224950	human	ensembl	69_37n	-1	known	missense	c.284	p.E95G	0.004	pfam_NA-bd_OB_tRNA-helicase,superfamily_NA-bd_OB-fold-like,pirsf_CST_STN1	pfam_DUF1879_CST_STN1,pfam_NA-bd_OB_tRNA-helicase,superfamily_NA-bd_OB-fold-like,pirsf_CST_STN1	-	no_errors	OBFC1	HGNC	ENSG00000107960	342	0	0.00	133	27	16.88	-	-	-
OBFC1	0	genome.wustl.edu	37	10	105664860	105664860	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	10	105664860	105664860	T	C	SNP	OBFC1	ENST00000224950	human	ensembl	69_37n	-1	known	missense	c.284	p.E95G	0.004	pfam_NA-bd_OB_tRNA-helicase,superfamily_NA-bd_OB-fold-like,pirsf_CST_STN1	pfam_DUF1879_CST_STN1,pfam_NA-bd_OB_tRNA-helicase,superfamily_NA-bd_OB-fold-like,pirsf_CST_STN1	-	no_errors	OBFC1	HGNC	ENSG00000107960	278	0	0.00	133	27	16.88	-	-	-
ODZ2	0	genome.wustl.edu	37	5	167671462	167671462	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	5	167671462	167671462	G	A	SNP	ODZ2	ENST00000518659	human	ensembl	69_37n	+1	known	missense	c.5558	p.R1853Q	1.000	superfamily_ConA-like_lec_gl	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl,superfamily_Cytokine_IL1-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ2	HGNC	ENSG00000145934	23	0	0.00	13	9	40.91	-	-	-
ODZ2	0	genome.wustl.edu	37	5	167671462	167671462	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	5	167671462	167671462	G	A	SNP	ODZ2	ENST00000518659	human	ensembl	69_37n	+1	known	missense	c.5558	p.R1853Q	1.000	superfamily_ConA-like_lec_gl	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl,superfamily_Cytokine_IL1-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ2	HGNC	ENSG00000145934	31	0	0.00	13	9	40.91	-	-	-
PCDHB16	0	genome.wustl.edu	37	5	140563931	140563931	+	Silent	SNP	T	T	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	5	140563931	140563931	T	C	SNP	PCDHB16	ENST00000361016	human	ensembl	69_37n	+1	known	silent	c.1797	p.N599	0.988	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963	12	0	0.00	7	8	53.33	-	-	-
PCDHGA3	0	genome.wustl.edu	37	5	140724038	140724038	+	Silent	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	5	140724038	140724038	G	A	SNP	PCDHGA3	ENST00000253812	human	ensembl	69_37n	+1	known	silent	c.438	p.T146	0.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245	115	0	0.00	104	18	14.75	-	-	-
PCDHGA3	0	genome.wustl.edu	37	5	140724038	140724038	+	Silent	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	5	140724038	140724038	G	A	SNP	PCDHGA3	ENST00000253812	human	ensembl	69_37n	+1	known	silent	c.438	p.T146	0.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245	152	0	0.00	104	18	14.75	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178951964	178951964	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	3	178951964	178951964	G	C	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3019	p.G1007R	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	297	0	0.00	162	88	35.20	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178951964	178951964	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	3	178951964	178951964	G	C	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3019	p.G1007R	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	168	0	0.00	162	88	35.20	-	-	-
PLCL2	0	genome.wustl.edu	37	3	17052713	17052713	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	3	17052713	17052713	C	A	SNP	PLCL2	ENST00000418129	human	ensembl	69_37n	+1	known	nonsense	c.1497	p.C499*	0.869	pfam_PLipase_C_Pinositol-sp_Y,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_Pinositol-sp_Y,pfscan_PLipase_C_Pinositol-sp_Y	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL2	HGNC	ENSG00000154822	86	0	0.00	88	24	21.43	-	-	-
PLCL2	0	genome.wustl.edu	37	3	17052713	17052713	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	3	17052713	17052713	C	A	SNP	PLCL2	ENST00000418129	human	ensembl	69_37n	+1	known	nonsense	c.1497	p.C499*	0.869	pfam_PLipase_C_Pinositol-sp_Y,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_Pinositol-sp_Y,pfscan_PLipase_C_Pinositol-sp_Y	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL2	HGNC	ENSG00000154822	126	0	0.00	88	24	21.43	-	-	-
PRUNE2	0	genome.wustl.edu	37	9	79259823	79259823	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	9	79259823	79259823	G	T	SNP	PRUNE2	ENST00000428286	human	ensembl	69_37n	-1	known	missense	c.7486	p.P2496T	0.030	pfam_Bcl2-/adenovirus-E1B	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC	ENSG00000106772	87	0	0.00	64	13	16.88	-	-	-
PRUNE2	0	genome.wustl.edu	37	9	79259823	79259823	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	9	79259823	79259823	G	T	SNP	PRUNE2	ENST00000428286	human	ensembl	69_37n	-1	known	missense	c.7486	p.P2496T	0.030	pfam_Bcl2-/adenovirus-E1B	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC	ENSG00000106772	90	0	0.00	64	13	16.88	-	-	-
PTHLH	0	genome.wustl.edu	37	12	28114898	28114898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	12	28114898	28114898	T	-	DEL	PTHLH	ENST00000354417	human	ensembl	69_37n	-1	known	frame_shift_del	c.557	p.K186fs	0.135	NULL	pfam_PTH/PTH-rel,smart_PTH/PTH-rel	-	no_errors	PTHLH	HGNC	ENSG00000087494	25	0	0.00	22	4	15.38	-	-	-
RIMS2	0	genome.wustl.edu	37	8	104709351	104709351	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	8	104709351	104709351	G	A	SNP	RIMS2	ENST00000406091	human	ensembl	69_37n	+1	known	missense	c.214	p.V72I	1.000	superfamily_Znf_FYVE_PHD,pfscan_Rab-bd_domain	pfam_C2_Ca-dep,pfam_PDZ,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_PDZ,pfscan_Rab-bd_domain,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406	245	0	0.00	327	39	10.66	-	-	-
RIMS2	0	genome.wustl.edu	37	8	104709351	104709351	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	8	104709351	104709351	G	A	SNP	RIMS2	ENST00000406091	human	ensembl	69_37n	+1	known	missense	c.214	p.V72I	1.000	superfamily_Znf_FYVE_PHD,pfscan_Rab-bd_domain	pfam_C2_Ca-dep,pfam_PDZ,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_PDZ,pfscan_Rab-bd_domain,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406	268	0	0.00	327	39	10.66	-	-	-
SHROOM2	0	genome.wustl.edu	37	X	9905450	9905451	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	X	9905450	9905451	-	C	INS	SHROOM2	ENST00000380913	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3864_3865	p.E1290fs	0.000:0.001	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM2	HGNC	ENSG00000146950	13	0	0.00	10	2	16.67	-	-	-
TTN	0	genome.wustl.edu	37	2	179604078	179604078	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	2	179604078	179604078	A	G	SNP	TTN	ENST00000342175	human	ensembl	69_37n	-1	known	missense	c.13369	p.S4457P	0.222	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	154	0	0.00	168	23	12.04	-	-	-
TTN	0	genome.wustl.edu	37	2	179604078	179604078	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	2	179604078	179604078	A	G	SNP	TTN	ENST00000342175	human	ensembl	69_37n	-1	known	missense	c.13369	p.S4457P	0.222	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	192	0	0.00	168	23	12.04	-	-	-
USP54	0	genome.wustl.edu	37	10	75277121	75277121	+	Silent	SNP	A	A	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	10	75277121	75277121	A	C	SNP	USP54	ENST00000339859	human	ensembl	69_37n	-1	known	silent	c.3063	p.A1021	0.800	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP54	HGNC	ENSG00000166348	137	0	0.00	51	10	16.39	-	-	-
USP54	0	genome.wustl.edu	37	10	75277121	75277121	+	Silent	SNP	A	A	C			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	10	75277121	75277121	A	C	SNP	USP54	ENST00000339859	human	ensembl	69_37n	-1	known	silent	c.3063	p.A1021	0.800	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP54	HGNC	ENSG00000166348	81	0	0.00	51	10	16.39	-	-	-
XIST	0	genome.wustl.edu	37	X	73043145	73043145	+	RNA	DEL	T	T	-			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	X	73043145	73043145	T	-	DEL	XIST	ENST00000429829	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	25	0	0.00	70	11	13.25	-	-	-
ZNF124	0	genome.wustl.edu	37	1	247320267	247320267	+	Silent	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	71bbe21d-80fd-49be-ae4b-041f0ed1e617	1	247320267	247320267	A	G	SNP	ZNF124	ENST00000543802	human	ensembl	69_37n	-1	known	silent	c.657	p.N219	0.009	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF124	HGNC	ENSG00000196418	196	0	0.00	245	80	24.62	-	-	-
ZNF124	0	genome.wustl.edu	37	1	247320267	247320267	+	Silent	SNP	A	A	G			TCGA-BH-A0H9-01A-11W-A071-09	TCGA-BH-A0H9-11A-22W-A10F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6be3dccb-12f8-4ef5-962f-21a0b26f81ad	50589b20-69ac-484a-9fe8-d988a891d86e	1	247320267	247320267	A	G	SNP	ZNF124	ENST00000543802	human	ensembl	69_37n	-1	known	silent	c.657	p.N219	0.009	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF124	HGNC	ENSG00000196418	243	0	0.00	245	80	24.62	-	-	-
