Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
BTBD3	0	genome.wustl.edu	37	20	11904305	11904305	+	Silent	SNP	C	C	T			TCGA-BH-A1FH-01A-12D-A13L-09	TCGA-BH-A1FH-11B-42D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fd6bd486-6371-4892-863e-64838fcea624	0eff2896-73b8-4a34-90dd-96351fcb0eb2	20	11904305	11904305	C	T	SNP	BTBD3	ENST00000378226	human	ensembl	69_37n	+1	known	silent	c.1560	p.F520	1.000	pfam_PHR	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD3	HGNC	ENSG00000132640	44	0	0.00	148	21	12.43	-	-	-
GATA3	0	genome.wustl.edu	37	10	8115843	8115844	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A1FH-01A-12D-A13L-09	TCGA-BH-A1FH-11B-42D-A13O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fd6bd486-6371-4892-863e-64838fcea624	0eff2896-73b8-4a34-90dd-96351fcb0eb2	10	8115843	8115844	-	C	INS	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1192_1193	p.R399fs	1.000:1.000	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	70	0	0.00	111	17	13.28	-	-	-
NSUN5	0	genome.wustl.edu	37	7	72719078	72719078	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1FH-01A-12D-A13L-09	TCGA-BH-A1FH-11B-42D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fd6bd486-6371-4892-863e-64838fcea624	0eff2896-73b8-4a34-90dd-96351fcb0eb2	7	72719078	72719078	C	T	SNP	NSUN5	ENST00000438747	human	ensembl	69_37n	-1	known	missense	c.517	p.A173T	0.255	NULL	pfam_Fmu/NOL1/Nop2p,prints_RCMT	-	no_errors	NSUN5	HGNC	ENSG00000130305	54	0	0.00	95	15	13.64	-	-	-
PLCB4	0	genome.wustl.edu	37	20	9353021	9353021	+	Silent	SNP	G	G	A			TCGA-BH-A1FH-01A-12D-A13L-09	TCGA-BH-A1FH-11B-42D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fd6bd486-6371-4892-863e-64838fcea624	0eff2896-73b8-4a34-90dd-96351fcb0eb2	20	9353021	9353021	G	A	SNP	PLCB4	ENST00000334005	human	ensembl	69_37n	+1	known	silent	c.657	p.R219	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_PLC-beta_CS,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,prints_Pinositol_PLipase_C,pfscan_C2_membr_targeting,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB4	HGNC	ENSG00000101333	49	0	0.00	84	33	28.21	-	-	-
