Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCB7	0	genome.wustl.edu	37	X	74273323	74273323	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	X	74273323	74273323	T	C	SNP	ABCB7	ENST00000253577	human	ensembl	69_37n	-1	known	missense	c.2144	p.N715S	1.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB7	HGNC	ENSG00000131269	148	0	0.00	119	61	33.89	-	-	-
ADH1C	0	genome.wustl.edu	37	4	100261755	100261755	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	4	100261755	100261755	G	A	SNP	ADH1C	ENST00000515683	human	ensembl	69_37n	-1	known	missense	c.941	p.T314M	0.929	NULL	NULL	-	pseudogene	ADH1C	HGNC	ENSG00000248144	109	1	0.91	91	58	38.93	-	-	-
AIDA	0	genome.wustl.edu	37	1	222849466	222849466	+	Silent	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	1	222849466	222849466	G	A	SNP	AIDA	ENST00000340020	human	ensembl	69_37n	-1	known	silent	c.555	p.I185	0.933	pfam_AIDA	pfam_AIDA,superfamily_AIDA_N	-	no_errors	AIDA	HGNC	ENSG00000186063	107	0	0.00	64	61	48.80	-	-	-
AKAP1	0	genome.wustl.edu	37	17	55197673	55197673	+	Silent	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	17	55197673	55197673	C	T	SNP	AKAP1	ENST00000337714	human	ensembl	69_37n	+1	known	silent	c.2700	p.Y900	0.003	NULL	pfam_Tudor,pfam_KH_dom_type_1,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	AKAP1	HGNC	ENSG00000121057	93	0	0.00	50	32	39.02	-	-	-
ARAF	0	genome.wustl.edu	37	X	47429359	47429359	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	X	47429359	47429359	G	A	SNP	ARAF	ENST00000377045	human	ensembl	69_37n	+1	known	missense	c.1487	p.G496E	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	ARAF	HGNC	ENSG00000078061	37	0	0.00	27	22	44.90	-	-	-
CAND2	0	genome.wustl.edu	37	3	12856688	12856688	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	3	12856688	12856688	G	A	SNP	CAND2	ENST00000456430	human	ensembl	69_37n	+1	known	missense	c.1055	p.R352H	1.000	superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND2	HGNC	ENSG00000144712	13	0	0.00	12	7	36.84	-	-	-
CCNA2	0	genome.wustl.edu	37	4	122743762	122743762	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	4	122743762	122743762	C	A	SNP	CCNA2	ENST00000274026	human	ensembl	69_37n	-1	known	missense	c.253	p.V85F	0.078	pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNA2	HGNC	ENSG00000145386	63	0	0.00	57	37	39.36	-	-	-
CD46	0	genome.wustl.edu	37	1	207930364	207930364	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	1	207930364	207930364	T	G	SNP	CD46	ENST00000322875	human	ensembl	69_37n	+1	known	missense	c.103	p.C35G	0.997	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pirsf_M_CF_CD46,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pirsf_M_CF_CD46,pfscan_Sushi_SCR_CCP	-	no_errors	CD46	HGNC	ENSG00000117335	70	0	0.00	38	35	47.30	-	-	-
CHIC2	0	genome.wustl.edu	37	4	54880282	54880282	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	4	54880282	54880282	C	T	SNP	CHIC2	ENST00000263921	human	ensembl	69_37n	-1	known	missense	c.335	p.R112Q	1.000	pfam_Golgin_A_7/ERF4	pfam_Golgin_A_7/ERF4	-	no_errors	CHIC2	HGNC	ENSG00000109220	96	0	0.00	68	51	42.86	-	-	-
COL15A1	0	genome.wustl.edu	37	9	101822233	101822233	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	9	101822233	101822233	C	A	SNP	COL15A1	ENST00000375001	human	ensembl	69_37n	+1	known	missense	c.3400	p.L1134M	0.994	pfam_Collagenase_NC10/endostatin	pfam_Collagenase_NC10/endostatin,pfam_Collagen,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl,smart_Laminin_G	-	no_errors	COL15A1	HGNC	ENSG00000204291	102	0	0.00	74	62	45.59	-	-	-
CPN1	0	genome.wustl.edu	37	10	101823406	101823406	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	10	101823406	101823406	A	G	SNP	CPN1	ENST00000370418	human	ensembl	69_37n	-1	known	missense	c.836	p.I279T	1.000	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_DUF2817,superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPN1	HGNC	ENSG00000120054	51	0	0.00	51	20	28.17	-	-	-
DDI1	0	genome.wustl.edu	37	11	103908332	103908332	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	11	103908332	103908332	C	T	SNP	DDI1	ENST00000302259	human	ensembl	69_37n	+1	known	missense	c.782	p.S261L	0.999	pfam_Peptidase_aspartic_euk-pred,pfam_RVP_2,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic	pfam_Peptidase_aspartic_euk-pred,pfam_Ubiquitin,pfam_RVP_2,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic,smart_Ubiquitin,pfscan_Ubiquitin_supergroup	-	no_errors	DDI1	HGNC	ENSG00000170967	50	0	0.00	29	25	46.30	-	-	-
DYNC2H1	0	genome.wustl.edu	37	11	103091479	103091479	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	11	103091479	103091479	G	T	SNP	DYNC2H1	ENST00000398093	human	ensembl	69_37n	+1	known	missense	c.9074	p.G3025V	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	70	0	0.00	49	38	43.68	-	-	-
FAM127C	0	genome.wustl.edu	37	X	134156443	134156443	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	X	134156443	134156443	A	C	SNP	FAM127C	ENST00000391440	human	ensembl	69_37n	-1	known	missense	c.47	p.L16R	0.000	NULL	NULL	-	no_errors	FAM127C	HGNC	ENSG00000212747	43	0	0.00	34	9	20.45	-	-	-
FAM58A	0	genome.wustl.edu	37	X	152858123	152858123	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	X	152858123	152858123	A	G	SNP	FAM58A	ENST00000440428	human	ensembl	69_37n	-1	novel	missense	c.175	p.C59R	0.882	superfamily_Cyclin-like	superfamily_Cyclin-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	FAM58A	HGNC	ENSG00000147382	29	0	0.00	19	10	34.48	-	-	-
FZD6	0	genome.wustl.edu	37	8	104342280	104342280	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	8	104342280	104342280	C	T	SNP	FZD6	ENST00000358755	human	ensembl	69_37n	+1	known	missense	c.1939	p.R647W	0.800	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD6	HGNC	ENSG00000164930	54	0	0.00	86	31	26.50	-	-	-
GLS	0	genome.wustl.edu	37	2	191827682	191827682	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	2	191827682	191827682	C	T	SNP	GLS	ENST00000412247	human	ensembl	69_37n	+1	putative	missense	c.479	p.P160L	0.049	NULL	pfam_Glutaminase,superfamily_Beta-lactam/transpept-like,superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_start_codon	GLS	HGNC	ENSG00000115419	47	0	0.00	37	21	36.21	-	-	-
GRB14	0	genome.wustl.edu	37	2	165378582	165378582	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	2	165378582	165378582	G	A	SNP	GRB14	ENST00000263915	human	ensembl	69_37n	-1	known	missense	c.724	p.H242Y	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB14	HGNC	ENSG00000115290	42	0	0.00	29	23	44.23	-	-	-
GRID2IP	0	genome.wustl.edu	37	7	6542661	6542661	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	7	6542661	6542661	C	T	SNP	GRID2IP	ENST00000457091	human	ensembl	69_37n	-1	putative	missense	c.3041	p.R1014Q	1.000	pfam_FH2_actin-bd,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg	pfam_FH2_actin-bd,pfam_PDZ,superfamily_FH2_actin-bd,superfamily_PDZ,smart_PDZ,smart_Actin-bd_FH2/DRF_autoreg,pfscan_PDZ	-	no_errors	GRID2IP	HGNC	ENSG00000215045	69	0	0.00	43	44	50.57	-	-	-
KIF6	0	genome.wustl.edu	37	6	39507794	39507794	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	6	39507794	39507794	G	A	SNP	KIF6	ENST00000287152	human	ensembl	69_37n	-1	known	missense	c.1630	p.L544F	1.000	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627	127	0	0.00	79	53	40.15	-	-	-
MAP2K4	0	genome.wustl.edu	37	17	12016616	12016616	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	17	12016616	12016616	G	T	SNP	MAP2K4	ENST00000415385	human	ensembl	69_37n	+1	known	missense	c.785	p.S262I	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP2K4	HGNC	ENSG00000065559	55	0	0.00	36	17	32.08	-	-	-
MORC4	0	genome.wustl.edu	37	X	106221352	106221352	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	X	106221352	106221352	G	T	SNP	MORC4	ENST00000355610	human	ensembl	69_37n	-1	known	missense	c.1014	p.N338K	1.000	NULL	pfam_Znf_CW,pfam_ATPase-like_ATP-bd,superfamily_ATPase-like_ATP-bd,superfamily_Prefoldin,pfscan_Znf_CW	-	no_errors	MORC4	HGNC	ENSG00000133131	136	0	0.00	85	58	40.56	-	-	-
MYBPC1	0	genome.wustl.edu	37	12	102045070	102045070	+	Silent	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	12	102045070	102045070	C	T	SNP	MYBPC1	ENST00000361466	human	ensembl	69_37n	+1	known	silent	c.1425	p.I475	1.000	pfam_Ig_I-set,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYBPC1	HGNC	ENSG00000196091	76	0	0.00	78	45	36.59	-	-	-
NARG2	0	genome.wustl.edu	37	15	60760323	60760323	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	15	60760323	60760323	G	A	SNP	NARG2	ENST00000558181	human	ensembl	69_37n	-1	known	missense	c.185	p.T62M	0.882	NULL	NULL	-	no_errors	NARG2	HGNC	ENSG00000128915	86	0	0.00	42	30	41.67	-	-	-
NBAS	0	genome.wustl.edu	37	2	15307434	15307434	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	2	15307434	15307434	T	C	SNP	NBAS	ENST00000281513	human	ensembl	69_37n	-1	known	missense	c.6854	p.N2285S	0.992	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	43	0	0.00	22	18	45.00	-	-	-
OCSTAMP	0	genome.wustl.edu	37	20	45173985	45173985	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	20	45173985	45173985	G	A	SNP	OCSTAMP	ENST00000279028	human	ensembl	69_37n	-1	known	missense	c.1028	p.T343M	0.587	pfam_DC_STAMP-like	pfam_DC_STAMP-like	-	no_errors	OCSTAMP	HGNC	ENSG00000149635	9	0	0.00	12	7	36.84	-	-	-
PDPR	0	genome.wustl.edu	37	16	70178401	70178401	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	16	70178401	70178401	A	T	SNP	PDPR	ENST00000288050	human	ensembl	69_37n	+1	known	missense	c.1832	p.N611I	0.999	pfam_GCV_T_N	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_FAD_bind_dom	-	no_errors	PDPR	HGNC	ENSG00000090857	12	0	0.00	0	3	100.00	-	-	-
PRSS50	0	genome.wustl.edu	37	3	46759116	46759116	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	3	46759116	46759116	C	T	SNP	PRSS50	ENST00000315170	human	ensembl	69_37n	-1	known	missense	c.118	p.A40T	0.000	NULL	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	PRSS50	HGNC	ENSG00000206549	29	0	0.00	31	21	39.62	-	-	-
PTTG1	0	genome.wustl.edu	37	5	159854736	159854736	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	5	159854736	159854736	G	A	SNP	PTTG1	ENST00000352433	human	ensembl	69_37n	+1	known	missense	c.385	p.D129N	1.000	pfam_Securin_separation_inhibitor	pfam_Securin_separation_inhibitor	-	no_errors	PTTG1	HGNC	ENSG00000164611	42	0	0.00	34	24	41.38	-	-	-
RAD54L2	0	genome.wustl.edu	37	3	51673686	51673686	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	3	51673686	51673686	G	A	SNP	RAD54L2	ENST00000409535	human	ensembl	69_37n	+1	known	nonsense	c.2112	p.W704*	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080	46	0	0.00	22	22	50.00	-	-	-
RERE	0	genome.wustl.edu	37	1	8617573	8617573	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	1	8617573	8617573	C	T	SNP	RERE	ENST00000337907	human	ensembl	69_37n	-1	known	missense	c.532	p.D178N	1.000	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599	42	0	0.00	7	28	77.78	-	-	-
SLTM	0	genome.wustl.edu	37	15	59186732	59186732	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	15	59186732	59186732	C	T	SNP	SLTM	ENST00000380516	human	ensembl	69_37n	-1	known	missense	c.1277	p.C426Y	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_SAP_DNA-bd,smart_SAP_DNA-bd,smart_RRM_dom,pfscan_SAP_DNA-bd,pfscan_RRM_dom	-	no_errors	SLTM	HGNC	ENSG00000137776	78	0	0.00	56	34	37.78	-	-	-
SPEN	0	genome.wustl.edu	37	1	16202935	16202936	+	Frame_Shift_Ins	INS	-	-	TA			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	1	16202935	16202936	-	TA	INS	SPEN	ENST00000375759	human	ensembl	69_37n	+1	known	frame_shift_ins	c.643_644	p.H216fs	1.000:1.000	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526	51	0	0.00	11	23	67.65	-	-	-
SPPL2B	0	genome.wustl.edu	37	19	2353046	2353046	+	RNA	SNP	C	C	G			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	19	2353046	2353046	C	G	SNP	SPPL2B	ENST00000452401	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPPL2B	HGNC	ENSG00000005206	18	0	0.00	14	6	30.00	-	-	-
STAG2	0	genome.wustl.edu	37	X	123184970	123184970	+	Splice_Site	DEL	G	G	-			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	X	123184970	123184970	G	-	DEL	STAG2	ENST00000218089	human	ensembl	69_37n	+1	known	splice_site_del	c.1018-1	e10-1	1.000	-	-	-	no_errors	STAG2	HGNC	ENSG00000101972	9	0	0.00	3	2	33.33	-	-	-
TJP1	0	genome.wustl.edu	37	15	30024679	30024679	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	15	30024679	30024679	C	A	SNP	TJP1	ENST00000346128	human	ensembl	69_37n	-1	known	nonsense	c.1975	p.E659*	1.000	smart_Guanylate_kin/L-typ_Ca_channel	pfam_PDZ,pfam_ZU5,pfam_Guanylate_kin,pfam_SH3_2,superfamily_PDZ,superfamily_SH3_domain,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067	89	0	0.00	61	48	44.04	-	-	-
UAP1L1	0	genome.wustl.edu	37	9	139972912	139972912	+	Silent	SNP	G	G	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	9	139972912	139972912	G	T	SNP	UAP1L1	ENST00000360271	human	ensembl	69_37n	+1	known	silent	c.84	p.G28	0.000	NULL	pfam_UDPGP_trans	-	no_errors	UAP1L1	HGNC	ENSG00000197355	21	0	0.00	8	11	57.89	-	-	-
ZNF180	0	genome.wustl.edu	37	19	44980904	44980904	+	Silent	SNP	A	A	T			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	19	44980904	44980904	A	T	SNP	ZNF180	ENST00000221327	human	ensembl	69_37n	-1	known	silent	c.1794	p.T598	0.388	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF180	HGNC	ENSG00000167384	88	0	0.00	38	47	55.29	-	-	-
ZNF469	0	genome.wustl.edu	37	16	88494721	88494721	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	16	88494721	88494721	T	A	SNP	ZNF469	ENST00000437464	human	ensembl	69_37n	+1	known	missense	c.843	p.H281Q	0.067	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	8	0	0.00	2	7	77.78	-	-	-
ZNF691	0	genome.wustl.edu	37	1	43317408	43317408	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A204-01A-11D-A159-09	TCGA-BH-A204-11A-53D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2454d30f-1ca5-4f01-bfce-6ae10e84e75a	38726a6a-7c67-43c9-b795-71512b2a6f7f	1	43317408	43317408	A	G	SNP	ZNF691	ENST00000397044	human	ensembl	69_37n	+1	known	missense	c.872	p.H291R	0.845	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF691	HGNC	ENSG00000164011	17	0	0.00	2	15	88.24	-	-	-
