Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AGAP3	0	genome.wustl.edu	37	7	150840935	150840935	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	7	150840935	150840935	G	A	SNP	AGAP3	ENST00000397238	human	ensembl	69_37n	+1	known	missense	c.2641	p.G881R	0.997	NULL	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Pleckstrin_homology,superfamily_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP3	HGNC	ENSG00000133612	15	0	0.00	9	5	35.71	-	-	-
ALMS1	0	genome.wustl.edu	37	2	73717343	73717343	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	2	73717343	73717343	C	G	SNP	ALMS1	ENST00000264448	human	ensembl	69_37n	+1	known	missense	c.8254	p.H2752D	0.998	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	87	0	0.00	19	6	24.00	-	-	-
ALMS1	0	genome.wustl.edu	37	2	73717959	73717959	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	2	73717959	73717959	C	T	SNP	ALMS1	ENST00000264448	human	ensembl	69_37n	+1	known	missense	c.8870	p.S2957L	0.398	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	115	0	0.00	27	9	25.00	-	-	-
ALMS1	0	genome.wustl.edu	37	2	73718057	73718057	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	2	73718057	73718057	C	T	SNP	ALMS1	ENST00000264448	human	ensembl	69_37n	+1	known	nonsense	c.8968	p.Q2990*	0.944	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	102	0	0.00	18	8	30.77	-	-	-
ARMCX3	0	genome.wustl.edu	37	X	100880821	100880821	+	Silent	SNP	A	A	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	X	100880821	100880821	A	G	SNP	ARMCX3	ENST00000341189	human	ensembl	69_37n	+1	known	silent	c.852	p.Q284	0.991	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX3	HGNC	ENSG00000102401	52	0	0.00	21	4	16.00	-	-	-
ASMT	0	genome.wustl.edu	37	X	1755428	1755428	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	X	1755428	1755428	G	C	SNP	ASMT	ENST00000381241	human	ensembl	69_37n	+1	known	missense	c.885	p.E295D	0.000	pfam_O_MeTrfase_2,pirsf_O-MeTrfase_CAOMT-type	pfam_O_MeTrfase_2,pirsf_O-MeTrfase_CAOMT-type	-	no_errors	ASMT	HGNC	ENSG00000196433	237	0	0.00	80	20	20.00	-	-	-
BPIFB1	0	genome.wustl.edu	37	20	31890728	31890728	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	20	31890728	31890728	G	A	SNP	BPIFB1	ENST00000253354	human	ensembl	69_37n	+1	known	missense	c.988	p.D330N	0.000	superfamily_Bactericidal_perm-incr_a/b_dom,pirsf_PLUNC_long_form	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,pirsf_PLUNC_long_form	-	no_errors	BPIFB1	HGNC	ENSG00000125999	53	0	0.00	22	4	15.38	-	-	-
CCDC48	0	genome.wustl.edu	37	3	128758648	128758648	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	3	128758648	128758648	C	G	SNP	CCDC48	ENST00000436022	human	ensembl	69_37n	+1	known	missense	c.443	p.S148C	0.003	NULL	NULL	-	no_errors	CCDC48	HGNC	ENSG00000114654	27	0	0.00	12	7	36.84	-	-	-
CFH	0	genome.wustl.edu	37	1	196654268	196654268	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	196654268	196654268	G	A	SNP	CFH	ENST00000367429	human	ensembl	69_37n	+1	known	missense	c.865	p.E289K	0.791	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971	55	0	0.00	6	7	53.85	-	-	-
CHRDL1	0	genome.wustl.edu	37	X	110035325	110035325	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	X	110035325	110035325	G	C	SNP	CHRDL1	ENST00000372042	human	ensembl	69_37n	-1	known	missense	c.85	p.Q29E	1.000	NULL	pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	-	no_errors	CHRDL1	HGNC	ENSG00000101938	161	0	0.00	54	12	18.18	-	-	-
CLEC12A	0	genome.wustl.edu	37	12	10137481	10137481	+	Silent	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	12	10137481	10137481	C	T	SNP	CLEC12A	ENST00000355690	human	ensembl	69_37n	+1	known	silent	c.684	p.N228	0.001	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12A	HGNC	ENSG00000172322	139	1	0.71	33	9	21.43	-	-	-
CR2	0	genome.wustl.edu	37	1	207648485	207648485	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	207648485	207648485	C	G	SNP	CR2	ENST00000367057	human	ensembl	69_37n	+1	known	missense	c.2640	p.I880M	1.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322	168	0	0.00	53	15	22.06	-	-	-
CSMD2	0	genome.wustl.edu	37	1	34002643	34002643	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	34002643	34002643	C	G	SNP	CSMD2	ENST00000373381	human	ensembl	69_37n	-1	known	missense	c.9858	p.Q3286H	1.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	95	0	0.00	31	11	26.19	-	-	-
CTSE	0	genome.wustl.edu	37	1	206331149	206331149	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	206331149	206331149	G	A	SNP	CTSE	ENST00000360218	human	ensembl	69_37n	+1	known	missense	c.1013	p.G338E	0.390	NULL	pfam_Peptidase_A1,pfam_Propep_A1,superfamily_Peptidase_aspartic,prints_Peptidase_A1	-	no_errors	CTSE	HGNC	ENSG00000196188	128	0	0.00	31	8	20.51	-	-	-
CYP2B6	0	genome.wustl.edu	37	19	41510050	41510050	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	19	41510050	41510050	C	G	SNP	CYP2B6	ENST00000324071	human	ensembl	69_37n	+1	known	missense	c.316	p.P106A	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2B-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I_CYP2A-like	-	no_errors	CYP2B6	HGNC	ENSG00000197408	48	0	0.00	21	6	22.22	-	-	-
DNTT	0	genome.wustl.edu	37	10	98087355	98087355	+	Silent	SNP	G	G	C			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	10	98087355	98087355	G	C	SNP	DNTT	ENST00000371174	human	ensembl	69_37n	+1	known	silent	c.1005	p.R335	0.990	pfam_Nucleotidyltransferase,smart_DNA-dir_DNA_pol_X,pirsf_DNA_nucleotidylexotransferase,prints_DNA_nucleotidylexotransferase,prints_DNA_pol_X,prints_DNA_pol_X_beta-like	pfam_DNA_pol_lambd_fingers_domain,pfam_BRCT_dom,pfam_Nucleotidyltransferase,superfamily_DNA-dir_DNA_pol_X_beta-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_DNA-dir_DNA_pol_X,pirsf_DNA_nucleotidylexotransferase,pfscan_BRCT_dom,prints_DNA_nucleotidylexotransferase,prints_DNA_pol_X,prints_DNA_pol_X_beta-like	-	no_errors	DNTT	HGNC	ENSG00000107447	108	0	0.00	36	6	14.29	-	-	-
ENPEP	0	genome.wustl.edu	37	4	111474542	111474542	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	4	111474542	111474542	C	T	SNP	ENPEP	ENST00000265162	human	ensembl	69_37n	+1	known	missense	c.2573	p.S858L	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792	251	0	0.00	50	26	34.21	-	-	-
FAM21A	0	genome.wustl.edu	37	10	51853633	51853633	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	10	51853633	51853633	C	T	SNP	FAM21A	ENST00000282633	human	ensembl	69_37n	+1	known	missense	c.1136	p.T379M	0.370	NULL	NULL	-	no_errors	FAM21A	HGNC	ENSG00000099290	29	0	0.00	14	3	17.65	-	-	-
FOLH1B	0	genome.wustl.edu	37	11	89420578	89420578	+	RNA	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	11	89420578	89420578	C	T	SNP	FOLH1B	ENST00000525540	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612	159	1	0.62	35	21	37.50	-	-	-
GH2	0	genome.wustl.edu	37	17	61957656	61957656	+	Silent	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	17	61957656	61957656	G	A	SNP	GH2	ENST00000456543	human	ensembl	69_37n	-1	known	silent	c.675	p.T225	0.019	NULL	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	GH2	HGNC	ENSG00000136487	109	0	0.00	50	9	15.25	-	-	-
GOLGA6L2	0	genome.wustl.edu	37	15	23685300	23685301	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	15	23685300	23685301	TT	-	DEL	GOLGA6L2	ENST00000567107	human	ensembl	69_37n	-1	putative	frame_shift_del	c.2322_2321	p.E774fs	0.104:0.092	NULL	NULL	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	10	0	0.00	4	2	33.33	-	-	-
GOLGA6L7P	0	genome.wustl.edu	37	15	29092336	29092336	+	RNA	SNP	A	A	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	15	29092336	29092336	A	G	SNP	GOLGA6L7P	ENST00000569815	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.059	-	-	-	no_errors	GOLGA6L7P	HGNC	ENSG00000261649	43	0	0.00	15	4	21.05	-	-	-
HDAC1	0	genome.wustl.edu	37	1	32793146	32793146	+	Silent	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	32793146	32793146	G	A	SNP	HDAC1	ENST00000373548	human	ensembl	69_37n	+1	known	silent	c.504	p.Q168	1.000	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC1	HGNC	ENSG00000116478	27	0	0.00	11	5	31.25	-	-	-
HDX	0	genome.wustl.edu	37	X	83724462	83724462	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	X	83724462	83724462	C	G	SNP	HDX	ENST00000297977	human	ensembl	69_37n	-1	known	missense	c.269	p.R90P	0.040	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	HDX	HGNC	ENSG00000165259	201	0	0.00	64	16	20.00	-	-	-
HUS1	0	genome.wustl.edu	37	7	48018139	48018139	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	7	48018139	48018139	C	T	SNP	HUS1	ENST00000258774	human	ensembl	69_37n	-1	known	missense	c.232	p.E78K	1.000	pfam_Hus1,pirsf_Cell_cycle_HUS1	pfam_Hus1,pirsf_Cell_cycle_HUS1	-	no_errors	HUS1	HGNC	ENSG00000136273	178	0	0.00	51	16	23.88	-	-	-
KIRREL3	0	genome.wustl.edu	37	11	126391325	126391325	+	Silent	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	11	126391325	126391325	C	T	SNP	KIRREL3	ENST00000525144	human	ensembl	69_37n	-1	known	silent	c.318	p.L106	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	KIRREL3	HGNC	ENSG00000149571	53	0	0.00	28	9	24.32	-	-	-
LRP1B	0	genome.wustl.edu	37	2	141819658	141819658	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	2	141819658	141819658	G	A	SNP	LRP1B	ENST00000389484	human	ensembl	69_37n	-1	known	nonsense	c.1198	p.Q400*	0.985	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_dom,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	275	0	0.00	67	12	15.19	-	-	-
MAGEE1	0	genome.wustl.edu	37	X	75651058	75651058	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	X	75651058	75651058	T	C	SNP	MAGEE1	ENST00000361470	human	ensembl	69_37n	+1	known	missense	c.2735	p.M912T	0.998	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	114	0	0.00	45	8	15.09	-	-	-
MGAM	0	genome.wustl.edu	37	7	141754683	141754683	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	7	141754683	141754683	C	T	SNP	MGAM	ENST00000549489	human	ensembl	69_37n	+1	known	missense	c.3289	p.R1097C	0.098	superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	87	0	0.00	29	7	19.44	-	-	-
MRPL35	0	genome.wustl.edu	37	2	86434315	86434315	+	Silent	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	2	86434315	86434315	C	T	SNP	MRPL35	ENST00000337109	human	ensembl	69_37n	+1	known	silent	c.243	p.P81	0.988	NULL	pfam_Ribosomal_L35	-	no_errors	MRPL35	HGNC	ENSG00000132313	63	0	0.00	15	11	42.31	-	-	-
MYO16	0	genome.wustl.edu	37	13	109753162	109753162	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	13	109753162	109753162	G	T	SNP	MYO16	ENST00000356711	human	ensembl	69_37n	+1	known	missense	c.3299	p.R1100L	0.002	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515	81	0	0.00	28	7	20.00	-	-	-
OVCH1	0	genome.wustl.edu	37	12	29649525	29649525	+	Silent	SNP	A	A	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	12	29649525	29649525	A	G	SNP	OVCH1	ENST00000318184	human	ensembl	69_37n	-1	known	silent	c.147	p.S49	0.018	superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_CUB,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,superfamily_CUB,smart_Peptidase_S1_S6,smart_CUB,prints_Peptidase_S1A,pfscan_CUB,pfscan_Peptidase_S1_S6	-	no_errors	OVCH1	HGNC	ENSG00000187950	103	0	0.00	31	14	31.11	-	-	-
PCSK2	0	genome.wustl.edu	37	20	17446160	17446160	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	20	17446160	17446160	G	C	SNP	PCSK2	ENST00000262545	human	ensembl	69_37n	+1	known	missense	c.1392	p.E464D	1.000	superfamily_Galactose-bd-like	pfam_Peptidase_S8/S53,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK2	HGNC	ENSG00000125851	68	0	0.00	17	13	43.33	-	-	-
PDS5B	0	genome.wustl.edu	37	13	33281097	33281097	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	13	33281097	33281097	C	T	SNP	PDS5B	ENST00000315596	human	ensembl	69_37n	+1	known	missense	c.1883	p.S628L	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642	83	0	0.00	24	6	20.00	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	95	0	0.00	24	22	47.83	-	-	-
PROSC	0	genome.wustl.edu	37	8	37633453	37633453	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	8	37633453	37633453	G	A	SNP	PROSC	ENST00000521494	human	ensembl	69_37n	+1	putative	missense	c.521	p.G174E	0.186	pfam_Ala_racemase_N,pirsf_UPF0001,tigrfam_UPF0001	pfam_Ala_racemase_N,pirsf_UPF0001,tigrfam_UPF0001	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PROSC	HGNC	ENSG00000147471	132	0	0.00	46	26	36.11	-	-	-
PSMD11	0	genome.wustl.edu	37	17	30781593	30781593	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	17	30781593	30781593	C	G	SNP	PSMD11	ENST00000261712	human	ensembl	69_37n	+1	known	missense	c.274	p.L92V	1.000	NULL	pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	PSMD11	HGNC	ENSG00000108671	167	0	0.00	20	23	53.49	-	-	-
RERE	0	genome.wustl.edu	37	1	8421432	8421432	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	8421432	8421432	G	T	SNP	RERE	ENST00000337907	human	ensembl	69_37n	-1	known	missense	c.2135	p.S712Y	1.000	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599	140	0	0.00	59	25	29.76	-	-	-
RNF40	0	genome.wustl.edu	37	16	30778177	30778177	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	16	30778177	30778177	T	A	SNP	RNF40	ENST00000324685	human	ensembl	69_37n	+1	known	missense	c.1409	p.L470Q	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF40	HGNC	ENSG00000103549	55	0	0.00	24	4	14.29	-	-	-
RP2	0	genome.wustl.edu	37	X	46696579	46696579	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	X	46696579	46696579	C	G	SNP	RP2	ENST00000218340	human	ensembl	69_37n	+1	known	missense	c.44	p.S15W	0.997	pirsf_Protein_XRP2	pfam_Tubulin-bd_cofactor_C,superfamily_Nucleoside_diP_kinase,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif,pirsf_Protein_XRP2	-	no_errors	RP2	HGNC	ENSG00000102218	34	0	0.00	25	5	16.67	-	-	-
RTN3	0	genome.wustl.edu	37	11	63487595	63487595	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	11	63487595	63487595	G	C	SNP	RTN3	ENST00000377819	human	ensembl	69_37n	+1	known	missense	c.1621	p.E541Q	0.201	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318	85	0	0.00	18	4	18.18	-	-	-
RUFY2	0	genome.wustl.edu	37	10	70152941	70152941	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	10	70152941	70152941	T	C	SNP	RUFY2	ENST00000388768	human	ensembl	69_37n	-1	known	missense	c.709	p.I237V	1.000	NULL	pfam_Run,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Run,smart_Znf_FYVE,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	RUFY2	HGNC	ENSG00000204130	161	0	0.00	20	5	20.00	-	-	-
SGK3	0	genome.wustl.edu	37	8	67740896	67740896	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	8	67740896	67740896	C	G	SNP	SGK3	ENST00000262211	human	ensembl	69_37n	+1	known	missense	c.425	p.S142C	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Phox,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_Phox,smart_Phox,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Phox,pfscan_Prot_kinase_cat_dom	-	no_errors	SGK3	HGNC	ENSG00000104205	293	0	0.00	96	20	17.24	-	-	-
SHISA4	0	genome.wustl.edu	37	1	201859608	201859608	+	Nonsense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	201859608	201859608	C	G	SNP	SHISA4	ENST00000362011	human	ensembl	69_37n	+1	known	nonsense	c.272	p.S91*	0.995	NULL	NULL	-	no_errors	SHISA4	HGNC	ENSG00000198892	128	0	0.00	48	9	15.79	-	-	-
SIGLEC8	0	genome.wustl.edu	37	19	51958011	51958011	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	19	51958011	51958011	C	G	SNP	SIGLEC8	ENST00000321424	human	ensembl	69_37n	-1	known	missense	c.1075	p.V359L	0.003	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	SIGLEC8	HGNC	ENSG00000105366	126	0	0.00	53	12	18.46	-	-	-
SLC26A10	0	genome.wustl.edu	37	12	58018733	58018733	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	12	58018733	58018733	G	T	SNP	SLC26A10	ENST00000320442	human	ensembl	69_37n	+1	known	nonsense	c.1312	p.E438*	0.006	pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A10	HGNC	ENSG00000135502	166	0	0.00	44	22	33.33	-	-	-
SLC39A4	0	genome.wustl.edu	37	8	145638248	145638248	+	Silent	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	8	145638248	145638248	G	A	SNP	SLC39A4	ENST00000301305	human	ensembl	69_37n	-1	known	silent	c.1710	p.F570	0.924	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A4	HGNC	ENSG00000147804	12	0	0.00	3	6	66.67	-	-	-
SPATA6	0	genome.wustl.edu	37	1	48918720	48918720	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	48918720	48918720	T	-	DEL	SPATA6	ENST00000371847	human	ensembl	69_37n	-1	known	frame_shift_del	c.135	p.Q45fs	1.000	NULL	NULL	-	no_errors	SPATA6	HGNC	ENSG00000132122	129	0	0.00	54	7	11.29	-	-	-
SPPL2A	0	genome.wustl.edu	37	15	51024862	51024862	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	15	51024862	51024862	C	T	SNP	SPPL2A	ENST00000261854	human	ensembl	69_37n	-1	known	missense	c.952	p.D318N	1.000	pfam_Peptidase_A22B_SPP,smart_Peptidase_A22	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Peptidase_A22	-	no_errors	SPPL2A	HGNC	ENSG00000138600	179	0	0.00	27	8	22.86	-	-	-
SULF1	0	genome.wustl.edu	37	8	70550877	70550877	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	8	70550877	70550877	C	T	SNP	SULF1	ENST00000260128	human	ensembl	69_37n	+1	known	nonsense	c.2425	p.Q809*	1.000	superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573	229	0	0.00	66	15	18.52	-	-	-
SYNE1	0	genome.wustl.edu	37	6	152558036	152558036	+	Silent	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	6	152558036	152558036	C	T	SNP	SYNE1	ENST00000265368	human	ensembl	69_37n	-1	known	silent	c.20115	p.L6705	1.000	superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	87	0	0.00	25	5	16.67	-	-	-
TNFRSF9	0	genome.wustl.edu	37	1	7993230	7993231	+	Frame_Shift_Ins	INS	-	-	ATAT			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	7993230	7993231	-	ATAT	INS	TNFRSF9	ENST00000377507	human	ensembl	69_37n	-1	known	frame_shift_ins	c.671_670	p.F224fs	0.918:0.008	prints_TNFR_9	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,prints_TNFR_9,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF9	HGNC	ENSG00000049249	74	0	0.00	18	2	10.00	-	-	-
TP53	0	genome.wustl.edu	37	17	7578290	7578290	+	Splice_Site	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	17	7578290	7578290	C	G	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	splice_site	c.560-1	e5-1	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	103	0	0.00	33	9	21.43	-	-	-
TRPC7	0	genome.wustl.edu	37	5	135692820	135692820	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	5	135692820	135692820	C	T	SNP	TRPC7	ENST00000513104	human	ensembl	69_37n	-1	known	missense	c.256	p.V86M	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC7	HGNC	ENSG00000069018	51	0	0.00	9	5	35.71	-	-	-
TSPEAR	0	genome.wustl.edu	37	21	45929173	45929173	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	21	45929173	45929173	G	-	DEL	TSPEAR	ENST00000323084	human	ensembl	69_37n	-1	known	frame_shift_del	c.1663	p.Q555fs	0.075	pfscan_EAR	pfam_EPTP,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894	79	0	0.00	18	2	10.00	-	-	-
WDR78	0	genome.wustl.edu	37	1	67371056	67371056	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	1	67371056	67371056	T	C	SNP	WDR78	ENST00000371026	human	ensembl	69_37n	-1	known	missense	c.173	p.N58S	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR78	HGNC	ENSG00000152763	176	0	0.00	47	13	21.67	-	-	-
XRCC1	0	genome.wustl.edu	37	19	44055732	44055732	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	19	44055732	44055732	G	A	SNP	XRCC1	ENST00000262887	human	ensembl	69_37n	-1	known	missense	c.1190	p.P397L	1.000	superfamily_BRCT_dom,pfscan_BRCT_dom	pfam_Xrcc1_N,pfam_BRCT_dom,superfamily_Galactose-bd-like,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	XRCC1	HGNC	ENSG00000073050	20	0	0.00	14	4	22.22	-	-	-
ZNF627	0	genome.wustl.edu	37	19	11728555	11728555	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A208-01A-11D-A159-09	TCGA-BH-A208-11A-51D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ae749fbb-6de7-4c51-b9d6-80a2ce7b5a29	e3c69830-05a7-4679-8d75-37591eade0bc	19	11728555	11728555	C	G	SNP	ZNF627	ENST00000361113	human	ensembl	69_37n	+1	known	missense	c.1237	p.H413D	0.975	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF627	HGNC	ENSG00000198551	83	0	0.00	31	6	16.22	-	-	-
