Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AASS	0	genome.wustl.edu	37	7	121741712	121741712	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	7	121741712	121741712	G	A	SNP	AASS	ENST00000393376	human	ensembl	69_37n	-1	known	missense	c.1301	p.P434L	1.000	NULL	pfam_Saccharopine_DH/HSpermid_syn,pfam_AlaDH/PNT_NAD(H)-bd,pfam_AlaDH/PNT_N	-	no_errors	AASS	HGNC	ENSG00000008311	151	0	0.00	151	28	15.64	-	-	-
ACIN1	0	genome.wustl.edu	37	14	23530619	23530619	+	Silent	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	14	23530619	23530619	C	T	SNP	ACIN1	ENST00000262710	human	ensembl	69_37n	-1	known	silent	c.3486	p.E1162	1.000	NULL	pfam_SAP_DNA-bd,smart_SAP_DNA-bd,pfscan_SAP_DNA-bd	-	no_errors	ACIN1	HGNC	ENSG00000100813	142	1	0.70	122	20	13.99	-	-	-
AHSA1	0	genome.wustl.edu	37	14	77935581	77935581	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	14	77935581	77935581	C	T	SNP	AHSA1	ENST00000216479	human	ensembl	69_37n	+1	known	missense	c.1006	p.R336C	1.000	NULL	pfam_AHSA1_N,pfam_Activator_of_Hsp90_ATPase,superfamily_AHSA1_N	-	no_errors	AHSA1	HGNC	ENSG00000100591	205	0	0.00	109	53	32.72	-	-	-
C17orf28	0	genome.wustl.edu	37	17	72951890	72951890	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	17	72951890	72951890	C	G	SNP	C17orf28	ENST00000425042	human	ensembl	69_37n	-1	known	missense	c.1633	p.D545H	1.000	NULL	pfam_Dymeclin	-	no_errors	C17orf28	HGNC	ENSG00000167861	240	0	0.00	559	123	18.01	-	-	-
C17orf28	0	genome.wustl.edu	37	17	72952020	72952020	+	Silent	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	17	72952020	72952020	C	T	SNP	C17orf28	ENST00000425042	human	ensembl	69_37n	-1	known	silent	c.1503	p.V501	1.000	pfam_Dymeclin	pfam_Dymeclin	-	no_errors	C17orf28	HGNC	ENSG00000167861	262	0	0.00	606	127	17.33	-	-	-
C17orf74	0	genome.wustl.edu	37	17	7329370	7329370	+	Splice_Site	SNP	G	G	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	17	7329370	7329370	G	C	SNP	C17orf74	ENST00000333870	human	ensembl	69_37n	+1	known	splice_site	c.196+1	e2+1	0.927	-	-	-	no_errors	C17orf74	HGNC	ENSG00000184560	147	0	0.00	84	16	16.00	-	-	-
CNGA3	0	genome.wustl.edu	37	2	99013403	99013403	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	2	99013403	99013403	G	T	SNP	CNGA3	ENST00000272602	human	ensembl	69_37n	+1	known	missense	c.1770	p.E590D	0.713	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA3	HGNC	ENSG00000144191	115	1	0.86	51	20	28.17	-	-	-
CYB5R4	0	genome.wustl.edu	37	6	84644368	84644368	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	6	84644368	84644368	C	T	SNP	CYB5R4	ENST00000369681	human	ensembl	69_37n	+1	known	missense	c.869	p.T290M	0.998	pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl	pfam_Cyt_B5,pfam_OxRdtase_FAD-bd_dom,pfam_OxRdtase_FAD/NAD-bd,pfam_CS_domain,superfamily_Cyt_B5,superfamily_Riboflavin_synthase-like_b-brl,superfamily_HSP20-like_chaperone,pfscan_CS-like_domain,pfscan_Cyt_B5,prints_NADH-Cyt_B5_reductase,prints_Cyt_B5	-	no_errors	CYB5R4	HGNC	ENSG00000065615	450	0	0.00	313	83	20.96	-	-	-
CYP2S1	0	genome.wustl.edu	37	19	41711922	41711922	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	19	41711922	41711922	C	A	SNP	CYP2S1	ENST00000310054	human	ensembl	69_37n	+1	known	missense	c.1224	p.H408Q	0.012	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450_E_grp-I_CYP2B-like,prints_Cyt_P450_B	-	no_errors	CYP2S1	HGNC	ENSG00000167600	256	0	0.00	181	51	21.70	-	-	-
DEFB129	0	genome.wustl.edu	37	20	210400	210402	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	20	210400	210402	AGA	-	DEL	DEFB129	ENST00000246105	human	ensembl	69_37n	+1	known	in_frame_del	c.540_542	p.E182in_frame_del	0.002:0.000:0.000	NULL	NULL	-	no_errors	DEFB129	HGNC	ENSG00000125903	511	0	0.00	320	101	23.93	-	-	-
DUSP10	0	genome.wustl.edu	37	1	221912365	221912365	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	1	221912365	221912365	T	C	SNP	DUSP10	ENST00000366899	human	ensembl	69_37n	-1	known	missense	c.722	p.N241S	1.000	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,superfamily_Blood-coag_inhib_Disintegrin,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP,prints_Atypical_DUSP	-	no_errors	DUSP10	HGNC	ENSG00000143507	245	0	0.00	213	92	30.16	-	-	-
EMR2	0	genome.wustl.edu	37	19	14863285	14863285	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	19	14863285	14863285	C	T	SNP	EMR2	ENST00000392962	human	ensembl	69_37n	-1	known	missense	c.1099	p.A367T	0.997	NULL	pfam_EGF-like_Ca-bd,pfam_EGF-like_dom,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,prints_GPCR_2_CD97	-	no_errors	EMR2	HGNC	ENSG00000127507	296	0	0.00	151	79	34.35	-	-	-
FOXN3	0	genome.wustl.edu	37	14	89878525	89878525	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	14	89878525	89878525	G	A	SNP	FOXN3	ENST00000261302	human	ensembl	69_37n	-1	known	missense	c.296	p.A99V	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXN3	HGNC	ENSG00000053254	101	0	0.00	67	18	21.18	-	-	-
GATA3	0	genome.wustl.edu	37	10	8115952	8115953	+	Frame_Shift_Ins	INS	-	-	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	10	8115952	8115953	-	C	INS	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1301_1302	p.H435fs	1.000:0.946	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	159	0	0.00	103	13	11.21	-	-	-
HCFC1	0	genome.wustl.edu	37	X	153215007	153215007	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	X	153215007	153215007	T	C	SNP	HCFC1	ENST00000310441	human	ensembl	69_37n	-1	known	missense	c.6065	p.E2022G	1.000	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	337	0	0.00	204	101	33.01	-	-	-
IL20RB	0	genome.wustl.edu	37	3	136699172	136699172	+	Splice_Site	SNP	G	G	A			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	3	136699172	136699172	G	A	SNP	IL20RB	ENST00000309741	human	ensembl	69_37n	+1	known	splice_site	c.1-1	e1-1	0.001	-	-	-	no_errors	IL20RB	HGNC	ENSG00000174564	67	0	0.00	59	21	25.93	-	-	-
KIAA1024	0	genome.wustl.edu	37	15	79749073	79749073	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	15	79749073	79749073	T	C	SNP	KIAA1024	ENST00000305428	human	ensembl	69_37n	+1	known	missense	c.584	p.L195S	1.000	NULL	pfam_UPF0258	-	no_errors	KIAA1024	HGNC	ENSG00000169330	110	0	0.00	77	31	28.70	-	-	-
KIF19	0	genome.wustl.edu	37	17	72350926	72350926	+	Silent	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	17	72350926	72350926	C	T	SNP	KIF19	ENST00000389916	human	ensembl	69_37n	+1	known	silent	c.2712	p.S904	0.054	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF19	HGNC	ENSG00000196169	169	0	0.00	415	60	12.63	-	-	-
KLK4	0	genome.wustl.edu	37	19	51410279	51410279	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	19	51410279	51410279	C	A	SNP	KLK4	ENST00000324041	human	ensembl	69_37n	-1	known	missense	c.676	p.A226S	0.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	KLK4	HGNC	ENSG00000167749	146	0	0.00	98	26	20.80	-	-	-
LMTK2	0	genome.wustl.edu	37	7	97823713	97823713	+	Silent	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	7	97823713	97823713	C	T	SNP	LMTK2	ENST00000297293	human	ensembl	69_37n	+1	known	silent	c.3936	p.D1312	0.373	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK2	HGNC	ENSG00000164715	126	0	0.00	57	26	31.33	-	-	-
MRPL38	0	genome.wustl.edu	37	17	73898161	73898161	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	17	73898161	73898161	G	C	SNP	MRPL38	ENST00000309352	human	ensembl	69_37n	-1	known	missense	c.322	p.Q108E	0.029	NULL	pfam_PtdEtn-bd_prot_PEBP,superfamily_PtdEtn-bd_prot_PEBP	-	no_errors	MRPL38	HGNC	ENSG00000204316	376	0	0.00	267	105	28.23	-	-	-
MTERFD3	0	genome.wustl.edu	37	12	107371529	107371529	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	12	107371529	107371529	C	T	SNP	MTERFD3	ENST00000240050	human	ensembl	69_37n	-1	known	missense	c.964	p.V322I	1.000	pfam_Mit_transcrip_term-rel	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD3	HGNC	ENSG00000120832	433	0	0.00	398	139	25.88	-	-	-
NCKAP5	0	genome.wustl.edu	37	2	133539971	133539971	+	Silent	SNP	T	T	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	2	133539971	133539971	T	C	SNP	NCKAP5	ENST00000317721	human	ensembl	69_37n	-1	known	silent	c.4413	p.T1471	0.969	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	244	0	0.00	141	50	26.18	-	-	-
OR7A5	0	genome.wustl.edu	37	19	14938267	14938267	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	19	14938267	14938267	C	A	SNP	OR7A5	ENST00000322301	human	ensembl	69_37n	-1	known	missense	c.787	p.A263S	0.020	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR7A5	HGNC	ENSG00000188269	285	0	0.00	203	62	23.40	-	-	-
OXA1L	0	genome.wustl.edu	37	14	23239475	23239475	+	Silent	SNP	C	C	G			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	14	23239475	23239475	C	G	SNP	OXA1L	ENST00000285848	human	ensembl	69_37n	+1	known	silent	c.837	p.L279	0.951	pfam_Membrane_insertion_OxaA/YidC,tigrfam_Membrane_insertion_OxaA/YidC	pfam_Membrane_insertion_OxaA/YidC,tigrfam_Membrane_insertion_OxaA/YidC	-	no_errors	OXA1L	HGNC	ENSG00000155463	226	0	0.00	169	61	26.41	-	-	-
PHC2	0	genome.wustl.edu	37	1	33795722	33795722	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	1	33795722	33795722	G	A	SNP	PHC2	ENST00000419414	human	ensembl	69_37n	-1	known	missense	c.2098	p.R700W	0.979	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC2	HGNC	ENSG00000134686	481	0	0.00	282	52	15.48	-	-	-
PITPNM1	0	genome.wustl.edu	37	11	67261512	67261512	+	Silent	SNP	C	C	A			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	11	67261512	67261512	C	A	SNP	PITPNM1	ENST00000356404	human	ensembl	69_37n	-1	known	silent	c.2889	p.L963	0.996	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697	59	0	0.00	33	7	17.50	-	-	-
POTEA	0	genome.wustl.edu	37	8	43152259	43152259	+	RNA	SNP	G	G	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	8	43152259	43152259	G	T	SNP	POTEA	ENST00000522175	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	POTEA	HGNC	ENSG00000188877	594	0	0.00	350	174	32.95	-	-	-
RAPGEF4	0	genome.wustl.edu	37	2	173825508	173825508	+	Silent	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	2	173825508	173825508	C	T	SNP	RAPGEF4	ENST00000397081	human	ensembl	69_37n	+1	known	silent	c.558	p.H186	1.000	NULL	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428	381	1	0.26	264	47	15.11	-	-	-
RBM19	0	genome.wustl.edu	37	12	114296632	114296632	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	12	114296632	114296632	G	T	SNP	RBM19	ENST00000261741	human	ensembl	69_37n	-1	known	missense	c.2628	p.F876L	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom	-	no_errors	RBM19	HGNC	ENSG00000122965	300	1	0.33	234	89	27.47	-	-	-
SERPINE1	0	genome.wustl.edu	37	7	100777176	100777176	+	Splice_Site	SNP	T	T	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	7	100777176	100777176	T	C	SNP	SERPINE1	ENST00000223095	human	ensembl	69_37n	+1	known	splice_site	c.899+2	e4+2	1.000	-	-	-	no_errors	SERPINE1	HGNC	ENSG00000106366	145	0	0.00	89	34	27.20	-	-	-
TCF7L2	0	genome.wustl.edu	37	10	114910812	114910812	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	10	114910812	114910812	C	T	SNP	TCF7L2	ENST00000355995	human	ensembl	69_37n	+1	known	missense	c.931	p.H311Y	1.000	NULL	pfam_CTNNB1-bd_N,pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	TCF7L2	HGNC	ENSG00000148737	360	0	0.00	213	57	21.03	-	-	-
TMA16	0	genome.wustl.edu	37	4	164428259	164428259	+	Missense_Mutation	SNP	A	A	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	4	164428259	164428259	A	T	SNP	TMA16	ENST00000358572	human	ensembl	69_37n	+1	known	missense	c.78	p.Q26H	0.997	pfam_DUF2962	pfam_DUF2962	-	no_errors	TMA16	HGNC	ENSG00000198498	346	0	0.00	228	51	18.21	-	-	-
TMEM246	0	genome.wustl.edu	37	9	104238875	104238875	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	9	104238875	104238875	C	T	SNP	TMEM246	ENST00000374847	human	ensembl	69_37n	-1	known	missense	c.500	p.R167H	1.000	NULL	NULL	-	no_errors	TMEM246	HGNC	ENSG00000165152	117	0	0.00	86	30	25.86	-	-	-
TMEM59	0	genome.wustl.edu	37	1	54509100	54509100	+	Silent	SNP	G	G	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	1	54509100	54509100	G	C	SNP	TMEM59	ENST00000234831	human	ensembl	69_37n	-1	known	silent	c.489	p.T163	1.000	pfam_Uncharacterised_TMEM59	pfam_Uncharacterised_TMEM59,superfamily_Prot_inh_Kunz-m	-	no_errors	TMEM59	HGNC	ENSG00000116209	172	0	0.00	123	24	16.33	-	-	-
VPS33B	0	genome.wustl.edu	37	15	91551102	91551102	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	15	91551102	91551102	G	C	SNP	VPS33B	ENST00000333371	human	ensembl	69_37n	-1	known	missense	c.496	p.L166V	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	VPS33B	HGNC	ENSG00000184056	248	0	0.00	179	25	12.25	-	-	-
XPO6	0	genome.wustl.edu	37	16	28167638	28167638	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HI-01A-11D-A135-09	TCGA-C8-A1HI-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	75dc3bff-75da-4734-b930-a18fd3d1ebfe	6944644c-a43b-4a5b-b506-7427227f3eb0	16	28167638	28167638	C	T	SNP	XPO6	ENST00000304658	human	ensembl	69_37n	-1	known	missense	c.854	p.R285Q	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO6	HGNC	ENSG00000169180	279	0	0.00	184	185	49.87	-	-	-
