Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTSL3	0	genome.wustl.edu	37	15	84488589	84488589	+	Silent	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	15	84488589	84488589	C	T	SNP	ADAMTSL3	ENST00000286744	human	ensembl	69_37n	+1	known	silent	c.390	p.F130	1.000	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218	70	0	0.00	42	20	32.26	-	-	-
AMPH	0	genome.wustl.edu	37	7	38502653	38502653	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	7	38502653	38502653	G	T	SNP	AMPH	ENST00000441628	human	ensembl	69_37n	-1	novel	missense	c.61	p.P21T	0.004	NULL	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_Amphiphysin,prints_SH3_domain	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	AMPH	HGNC	ENSG00000078053	213	0	0.00	195	35	15.22	-	-	-
ARFGEF1	0	genome.wustl.edu	37	8	68139523	68139523	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	8	68139523	68139523	C	T	SNP	ARFGEF1	ENST00000262215	human	ensembl	69_37n	-1	known	missense	c.3765	p.M1255I	1.000	pfam_DUF1981_SEC7_assoc,superfamily_ARM-type_fold	pfam_Sec7,pfam_DUF1981_SEC7_assoc,superfamily_Sec7,superfamily_ARM-type_fold,smart_Sec7,pfscan_Sec7	-	no_errors	ARFGEF1	HGNC	ENSG00000066777	108	0	0.00	95	15	13.64	-	-	-
ASL	0	genome.wustl.edu	37	7	65552371	65552371	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	7	65552371	65552371	C	T	SNP	ASL	ENST00000304874	human	ensembl	69_37n	+1	known	missense	c.653	p.A218V	0.997	pfam_Lyase1_N,superfamily_L-Aspartase-like,tigrfam_Argininosuccinate_lyase	pfam_Lyase1_N,superfamily_L-Aspartase-like,prints_D_crystallin,prints_Fumarate_lyase,tigrfam_Argininosuccinate_lyase	-	no_errors	ASL	HGNC	ENSG00000126522	35	0	0.00	21	10	32.26	-	-	-
ATP2B2	0	genome.wustl.edu	37	3	10387191	10387191	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	3	10387191	10387191	G	T	SNP	ATP2B2	ENST00000352432	human	ensembl	69_37n	-1	known	missense	c.2580	p.S860R	1.000	pfam_HAD-SF_hydro-like_3,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_cation-exchng_asu,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2B2	HGNC	ENSG00000157087	227	0	0.00	94	45	32.37	-	-	-
ATP2B2	0	genome.wustl.edu	37	3	10387192	10387192	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	3	10387192	10387192	C	G	SNP	ATP2B2	ENST00000352432	human	ensembl	69_37n	-1	known	missense	c.2579	p.S860T	1.000	pfam_HAD-SF_hydro-like_3,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_cation-exchng_asu,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2B2	HGNC	ENSG00000157087	227	0	0.00	92	45	32.61	-	-	-
BBS10	0	genome.wustl.edu	37	12	76741020	76741020	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	12	76741020	76741020	G	T	SNP	BBS10	ENST00000393262	human	ensembl	69_37n	-1	known	missense	c.745	p.R249S	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1	-	no_errors	BBS10	HGNC	ENSG00000179941	91	0	0.00	42	22	34.38	-	-	-
BLMH	0	genome.wustl.edu	37	17	28613877	28613877	+	Nonsense_Mutation	SNP	A	A	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	17	28613877	28613877	A	C	SNP	BLMH	ENST00000261714	human	ensembl	69_37n	-1	known	nonsense	c.507	p.Y169*	0.852	pfam_Peptidase_C1B,pirsf_Peptidase_C1B	pfam_Peptidase_C1B,pirsf_Peptidase_C1B	-	no_errors	BLMH	HGNC	ENSG00000108578	127	0	0.00	85	42	33.07	-	-	-
C10orf12	0	genome.wustl.edu	37	10	98742390	98742390	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	10	98742390	98742390	G	T	SNP	C10orf12	ENST00000286067	human	ensembl	69_37n	+1	known	missense	c.1243	p.D415Y	0.000	NULL	NULL	-	no_errors	C10orf12	HGNC	ENSG00000155640	39	0	0.00	21	5	19.23	-	-	-
C10orf12	0	genome.wustl.edu	37	10	98742978	98742978	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	10	98742978	98742978	A	G	SNP	C10orf12	ENST00000286067	human	ensembl	69_37n	+1	known	missense	c.1831	p.K611E	0.001	NULL	NULL	-	no_errors	C10orf12	HGNC	ENSG00000155640	36	0	0.00	37	6	13.95	-	-	-
C2orf18	0	genome.wustl.edu	37	2	26998432	26998432	+	Silent	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	2	26998432	26998432	G	A	SNP	C2orf18	ENST00000344420	human	ensembl	69_37n	+1	known	silent	c.423	p.V141	0.011	pfam_DUF914_euk,pfam_Nuc_sug_transpt,pfam_DMT,pfam_UAA,pirsf_UCP036436	pfam_DUF914_euk,pfam_Nuc_sug_transpt,pfam_DMT,pfam_DUF250,pfam_UAA,pirsf_UCP036436	-	no_errors	C2orf18	HGNC	ENSG00000213699	80	0	0.00	21	37	62.71	-	-	-
CASP8	0	genome.wustl.edu	37	2	202141566	202141566	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	2	202141566	202141566	A	T	SNP	CASP8	ENST00000358485	human	ensembl	69_37n	+1	known	missense	c.854	p.Y285F	1.000	superfamily_DEATH-like,smart_Pept_C14_p45_core	pfam_DED,pfam_Pept_C14_cat,superfamily_DEATH-like,smart_DED,smart_Pept_C14_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012	135	0	0.00	45	59	56.73	-	-	-
CCDC147	0	genome.wustl.edu	37	10	106160488	106160488	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	10	106160488	106160488	T	A	SNP	CCDC147	ENST00000369704	human	ensembl	69_37n	+1	known	missense	c.1866	p.D622E	0.580	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC147	HGNC	ENSG00000120051	133	0	0.00	72	8	10.00	-	-	-
CCDC74B	0	genome.wustl.edu	37	2	130900856	130900856	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	2	130900856	130900856	G	A	SNP	CCDC74B	ENST00000310463	human	ensembl	69_37n	-1	known	missense	c.281	p.T94I	0.830	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076	218	0	0.00	120	32	21.05	-	-	-
CDC42BPB	0	genome.wustl.edu	37	14	103400160	103400160	+	Missense_Mutation	SNP	T	T	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	14	103400160	103400160	T	G	SNP	CDC42BPB	ENST00000361246	human	ensembl	69_37n	-1	known	missense	c.5025	p.K1675N	1.000	NULL	pfam_Citron,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_PAK_box_Rho-bd,prints_DAG/PE-bd,pfscan_PAK_box_Rho-bd,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	CDC42BPB	HGNC	ENSG00000198752	133	1	0.75	46	35	43.21	-	-	-
CDIPT	0	genome.wustl.edu	37	16	29872462	29872462	+	Silent	SNP	A	A	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	16	29872462	29872462	A	G	SNP	CDIPT	ENST00000219789	human	ensembl	69_37n	-1	known	silent	c.297	p.S99	0.997	pirsf_CDP_diag_ino_3_P_euk	pfam_CDP-OH_P_trans,pirsf_CDP_diag_ino_3_P_euk	-	no_errors	CDIPT	HGNC	ENSG00000103502	103	0	0.00	60	21	25.61	-	-	-
CECR2	0	genome.wustl.edu	37	22	18028881	18028881	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	22	18028881	18028881	C	A	SNP	CECR2	ENST00000400573	human	ensembl	69_37n	+1	novel	missense	c.3838	p.H1280N	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CECR2	HGNC	ENSG00000099954	46	0	0.00	27	24	47.06	-	-	-
CPT1A	0	genome.wustl.edu	37	11	68566686	68566686	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	11	68566686	68566686	G	T	SNP	CPT1A	ENST00000265641	human	ensembl	69_37n	-1	known	nonsense	c.693	p.Y231*	0.427	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1A	HGNC	ENSG00000110090	110	0	0.00	74	31	29.52	-	-	-
DIAPH1	0	genome.wustl.edu	37	5	140953199	140953199	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	5	140953199	140953199	G	C	SNP	DIAPH1	ENST00000253811	human	ensembl	69_37n	-1	known	missense	c.2218	p.P740A	1.000	pfam_Formin_homology_1,superfamily_FH2_actin-bd	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,pfam_Formin_homology_1,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_FH2_actin-bd,superfamily_tRNA-bd_arm,smart_Actin-bd_FH2/DRF_autoreg	-	no_errors	DIAPH1	HGNC	ENSG00000131504	58	0	0.00	40	8	16.67	-	-	-
DNAH3	0	genome.wustl.edu	37	16	20997028	20997028	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	16	20997028	20997028	G	-	DEL	DNAH3	ENST00000261383	human	ensembl	69_37n	-1	known	frame_shift_del	c.7036	p.H2346fs	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	43	0	0.00	31	14	30.43	-	-	-
DNASE1L1	0	genome.wustl.edu	37	X	153631301	153631301	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	X	153631301	153631301	G	C	SNP	DNASE1L1	ENST00000014935	human	ensembl	69_37n	-1	known	missense	c.756	p.F252L	0.002	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I_euk,pirsf_DNase_I_euk,prints_DNase_I_euk	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I_euk,pirsf_DNase_I_euk,prints_DNase_I_euk	-	no_errors	DNASE1L1	HGNC	ENSG00000013563	39	0	0.00	4	14	73.68	-	-	-
DYX1C1	0	genome.wustl.edu	37	15	55727258	55727258	+	Splice_Site	SNP	T	T	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	15	55727258	55727258	T	C	SNP	DYX1C1	ENST00000321149	human	ensembl	69_37n	-1	known	splice_site	c.894-2	e7-2	0.997	-	-	-	no_errors	DYX1C1	HGNC	ENSG00000256061	101	0	0.00	45	31	40.79	-	-	-
EWSR1	0	genome.wustl.edu	37	22	29670255	29670255	+	Splice_Site	SNP	A	A	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	22	29670255	29670255	A	G	SNP	EWSR1	ENST00000447973	human	ensembl	69_37n	+1	putative	splice_site	c.230-2	e5-2	1.000	-	-	-	no_stop_codon	EWSR1	HGNC	ENSG00000182944	197	0	0.00	216	88	28.95	-	-	-
FAM186A	0	genome.wustl.edu	37	12	50748233	50748233	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	12	50748233	50748233	C	A	SNP	FAM186A	ENST00000327337	human	ensembl	69_37n	-1	known	missense	c.2382	p.M794I	0.003	NULL	NULL	-	no_errors	FAM186A	HGNC	ENSG00000185958	148	0	0.00	77	27	25.96	-	-	-
FAM75A6	0	genome.wustl.edu	37	9	43626815	43626815	+	Silent	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	9	43626815	43626815	G	A	SNP	FAM75A6	ENST00000332857	human	ensembl	69_37n	-1	known	silent	c.1872	p.D624	0.000	NULL	NULL	-	no_errors	FAM75A6	HGNC	ENSG00000185775	43	0	0.00	32	4	11.11	-	-	-
FAM83F	0	genome.wustl.edu	37	22	40417461	40417461	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	22	40417461	40417461	C	T	SNP	FAM83F	ENST00000333407	human	ensembl	69_37n	+1	known	missense	c.947	p.S316F	1.000	NULL	pfam_DUF1669	-	no_errors	FAM83F	HGNC	ENSG00000133477	36	0	0.00	31	22	41.51	-	-	-
FBXO15	0	genome.wustl.edu	37	18	71740756	71740756	+	Silent	SNP	G	G	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	18	71740756	71740756	G	C	SNP	FBXO15	ENST00000419743	human	ensembl	69_37n	-1	known	silent	c.1473	p.V491	1.000	NULL	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO15	HGNC	ENSG00000141665	205	2	0.96	144	21	12.73	-	-	-
FLT4	0	genome.wustl.edu	37	5	180046347	180046347	+	Silent	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	5	180046347	180046347	C	T	SNP	FLT4	ENST00000261937	human	ensembl	69_37n	-1	known	silent	c.2667	p.E889	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Tyr_kinase_VEGFR3_rcpt_N,prints_Tyr_kinase_VEGFR_rcpt_N	-	no_errors	FLT4	HGNC	ENSG00000037280	22	0	0.00	0	5	100.00	-	-	-
FMNL1	0	genome.wustl.edu	37	17	43314962	43314962	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	17	43314962	43314962	G	A	SNP	FMNL1	ENST00000328118	human	ensembl	69_37n	+1	known	missense	c.850	p.G284R	1.000	pfam_Drf_FH3,superfamily_ARM-type_fold	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,superfamily_FH2_actin-bd,superfamily_ARM-type_fold,smart_Actin-bd_FH2/DRF_autoreg	-	no_errors	FMNL1	HGNC	ENSG00000184922	84	0	0.00	20	45	69.23	-	-	-
FNDC7	0	genome.wustl.edu	37	1	109256138	109256138	+	Silent	SNP	T	T	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	1	109256138	109256138	T	G	SNP	FNDC7	ENST00000271311	human	ensembl	69_37n	+1	known	silent	c.72	p.A24	1.000	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC7	HGNC	ENSG00000143107	386	0	0.00	503	69	12.06	-	-	-
FSTL5	0	genome.wustl.edu	37	4	162307095	162307095	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	4	162307095	162307095	T	C	SNP	FSTL5	ENST00000306100	human	ensembl	69_37n	-1	known	missense	c.2348	p.K783R	1.000	NULL	pfam_Ig_I-set,pfam_Kazal-type_dom,pfam_Ig_V-set,pfam_Prot_inh_Kazal,smart_Prot_inh_Kazal,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_HAND_2,pfscan_Ig-like	-	no_errors	FSTL5	HGNC	ENSG00000168843	179	0	0.00	102	33	24.44	-	-	-
GIGYF1	0	genome.wustl.edu	37	7	100284335	100284337	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	7	100284335	100284337	CCT	-	DEL	GIGYF1	ENST00000275732	human	ensembl	69_37n	-1	known	in_frame_del	c.631_629	p.E210in_frame_del	1.000:0.992:0.999	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830	32	0	0.00	10	2	16.67	-	-	-
GLIS3	0	genome.wustl.edu	37	9	3856175	3856175	+	Silent	SNP	A	A	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	9	3856175	3856175	A	C	SNP	GLIS3	ENST00000381971	human	ensembl	69_37n	-1	known	silent	c.2307	p.P769	0.978	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS3	HGNC	ENSG00000107249	133	0	0.00	117	42	26.42	-	-	-
GP6	0	genome.wustl.edu	37	19	55526258	55526258	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	19	55526258	55526258	C	G	SNP	GP6	ENST00000310373	human	ensembl	69_37n	-1	known	missense	c.1055	p.R352T	0.000	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	GP6	HGNC	ENSG00000088053	78	0	0.00	37	13	25.49	-	-	-
GPR126	0	genome.wustl.edu	37	6	142726951	142726951	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	6	142726951	142726951	A	G	SNP	GPR126	ENST00000367609	human	ensembl	69_37n	+1	known	missense	c.2254	p.T752A	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_CUB,pfam_GPS_dom,pfam_Pentaxin,superfamily_CUB,superfamily_ConA-like_lec_gl,smart_CUB,smart_Pentaxin,smart_GPS_dom,pfscan_CUB,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR126	HGNC	ENSG00000112414	114	0	0.00	32	57	64.04	-	-	-
GRID1	0	genome.wustl.edu	37	10	88123716	88123716	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	10	88123716	88123716	A	T	SNP	GRID1	ENST00000327946	human	ensembl	69_37n	-1	known	missense	c.217	p.F73I	1.000	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID1	HGNC	ENSG00000182771	143	0	0.00	46	23	33.33	-	-	-
GRID1	0	genome.wustl.edu	37	10	88123717	88123717	+	Silent	SNP	T	T	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	10	88123717	88123717	T	A	SNP	GRID1	ENST00000327946	human	ensembl	69_37n	-1	known	silent	c.216	p.P72	0.996	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID1	HGNC	ENSG00000182771	144	0	0.00	46	23	33.33	-	-	-
HIST1H3I	0	genome.wustl.edu	37	6	27840018	27840018	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	6	27840018	27840018	C	G	SNP	HIST1H3I	ENST00000328488	human	ensembl	69_37n	-1	known	missense	c.76	p.A26P	1.000	superfamily_Histone-fold,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3I	HGNC	ENSG00000182572	28	0	0.00	25	6	18.75	-	-	-
HNRNPD	0	genome.wustl.edu	37	4	83278494	83278495	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	4	83278494	83278495	TT	-	DEL	HNRNPD	ENST00000313899	human	ensembl	69_37n	-1	known	frame_shift_del	c.725_724	p.K242fs	1.000:1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_CARG-binding_factor_N,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPD	HGNC	ENSG00000138668	287	0	0.00	97	88	47.57	-	-	-
HNRNPD	0	genome.wustl.edu	37	4	83278498	83278498	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	4	83278498	83278498	C	A	SNP	HNRNPD	ENST00000313899	human	ensembl	69_37n	-1	known	nonsense	c.721	p.E241*	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_CARG-binding_factor_N,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPD	HGNC	ENSG00000138668	279	1	0.36	72	99	57.89	-	-	-
HNRNPD	0	genome.wustl.edu	37	4	83278499	83278499	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	4	83278499	83278499	C	A	SNP	HNRNPD	ENST00000514671	human	ensembl	69_37n	-1	known	nonsense	c.430	p.G144*	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	HNRNPD	HGNC	ENSG00000138668	276	0	0.00	73	96	56.14	-	-	-
HS6ST1	0	genome.wustl.edu	37	2	129075877	129075877	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	2	129075877	129075877	G	T	SNP	HS6ST1	ENST00000259241	human	ensembl	69_37n	-1	known	missense	c.261	p.D87E	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	17	0	0.00	14	6	30.00	-	-	-
IGSF1	0	genome.wustl.edu	37	X	130416483	130416483	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	X	130416483	130416483	T	C	SNP	IGSF1	ENST00000370903	human	ensembl	69_37n	-1	known	missense	c.1181	p.Y394C	0.002	smart_Ig_sub,smart_Ig_sub2	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	IGSF1	HGNC	ENSG00000147255	160	0	0.00	47	66	58.41	-	-	-
IL1RAP	0	genome.wustl.edu	37	3	190321988	190321988	+	Nonsense_Mutation	SNP	A	A	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	3	190321988	190321988	A	T	SNP	IL1RAP	ENST00000443369	human	ensembl	69_37n	+1	known	nonsense	c.136	p.K46*	1.000	smart_Ig_sub,prints_IL1_rcpt_I/II	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like,prints_IL1_rcpt_1,prints_IL1_rcpt_I/II	-	no_errors	IL1RAP	HGNC	ENSG00000196083	116	1	0.85	86	39	31.20	-	-	-
IMMT	0	genome.wustl.edu	37	2	86400803	86400803	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	2	86400803	86400803	G	C	SNP	IMMT	ENST00000410111	human	ensembl	69_37n	-1	known	missense	c.391	p.Q131E	0.417	pfam_Mt-IM_prot_Mitofilin	pfam_Mt-IM_prot_Mitofilin	-	no_errors	IMMT	HGNC	ENSG00000132305	465	0	0.00	265	91	25.49	-	-	-
ITPKC	0	genome.wustl.edu	37	19	41231346	41231346	+	Splice_Site	SNP	T	T	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	19	41231346	41231346	T	G	SNP	ITPKC	ENST00000263370	human	ensembl	69_37n	+1	known	splice_site	c.1255+2	e2+2	1.000	-	-	-	no_errors	ITPKC	HGNC	ENSG00000086544	82	0	0.00	72	17	19.10	-	-	-
KCNT1	0	genome.wustl.edu	37	9	138669336	138669336	+	Silent	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	9	138669336	138669336	C	T	SNP	KCNT1	ENST00000298480	human	ensembl	69_37n	+1	known	silent	c.2502	p.I834	0.298	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_2	-	no_errors	KCNT1	HGNC	ENSG00000107147	28	0	0.00	11	7	38.89	-	-	-
LNX1	0	genome.wustl.edu	37	4	54374205	54374205	+	Silent	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	4	54374205	54374205	G	A	SNP	LNX1	ENST00000263925	human	ensembl	69_37n	-1	known	silent	c.570	p.D190	0.250	NULL	pfam_PDZ,superfamily_PDZ,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	LNX1	HGNC	ENSG00000072201	32	0	0.00	19	16	45.71	-	-	-
LTN1	0	genome.wustl.edu	37	21	30331787	30331787	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	21	30331787	30331787	A	C	SNP	LTN1	ENST00000361371	human	ensembl	69_37n	-1	known	missense	c.2586	p.H862Q	0.406	NULL	pfam_Znf_C3HC4_RING-type,superfamily_ARM-type_fold,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	LTN1	HGNC	ENSG00000198862	58	0	0.00	63	18	22.22	-	-	-
MED25	0	genome.wustl.edu	37	19	50333113	50333113	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	19	50333113	50333113	C	-	DEL	MED25	ENST00000312865	human	ensembl	69_37n	+1	known	frame_shift_del	c.596	p.P201fs	0.380	pfam_Mediator_Med25_VWA	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC	ENSG00000104973	23	0	0.00	14	2	12.50	-	-	-
MIR10B	0	genome.wustl.edu	37	2	177015045	177015045	+	RNA	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	2	177015045	177015045	G	A	SNP	MIR10B	ENST00000385011	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR10B	HGNC	ENSG00000207744	111	0	0.00	83	10	10.75	-	-	-
MYO1A	0	genome.wustl.edu	37	12	57441140	57441140	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	12	57441140	57441140	T	C	SNP	MYO1A	ENST00000300119	human	ensembl	69_37n	-1	known	missense	c.377	p.E126G	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1A	HGNC	ENSG00000166866	43	0	0.00	30	20	40.00	-	-	-
NBEAL1	0	genome.wustl.edu	37	2	203992635	203992635	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	2	203992635	203992635	T	C	SNP	NBEAL1	ENST00000449802	human	ensembl	69_37n	+1	known	missense	c.3293	p.I1098T	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL1	HGNC	ENSG00000144426	91	0	0.00	61	35	36.46	-	-	-
NUAK1	0	genome.wustl.edu	37	12	106461184	106461184	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	12	106461184	106461184	G	A	SNP	NUAK1	ENST00000261402	human	ensembl	69_37n	-1	known	missense	c.1382	p.T461M	0.984	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	NUAK1	HGNC	ENSG00000074590	90	0	0.00	46	16	25.81	-	-	-
OR1A2	0	genome.wustl.edu	37	17	3101122	3101122	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	17	3101122	3101122	A	T	SNP	OR1A2	ENST00000381951	human	ensembl	69_37n	+1	known	missense	c.310	p.M104L	0.883	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR1A2	HGNC	ENSG00000172150	211	0	0.00	96	51	34.69	-	-	-
OR2T1	0	genome.wustl.edu	37	1	248570049	248570049	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	1	248570049	248570049	T	A	SNP	OR2T1	ENST00000366474	human	ensembl	69_37n	+1	known	missense	c.754	p.C252S	0.964	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T1	HGNC	ENSG00000175143	421	0	0.00	276	153	35.58	-	-	-
OR2T29	0	genome.wustl.edu	37	1	248722668	248722668	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	1	248722668	248722668	G	A	SNP	OR2T29	ENST00000328570	human	ensembl	69_37n	-1	known	missense	c.125	p.A42V	0.001	prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T29	HGNC	ENSG00000182783	207	0	0.00	229	30	11.54	-	-	-
OR8D1	0	genome.wustl.edu	37	11	124180486	124180486	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	11	124180486	124180486	C	G	SNP	OR8D1	ENST00000357821	human	ensembl	69_37n	-1	known	missense	c.177	p.M59I	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR8D1	HGNC	ENSG00000196341	83	0	0.00	86	12	12.24	-	-	-
PACSIN2	0	genome.wustl.edu	37	22	43287157	43287157	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	22	43287157	43287157	C	G	SNP	PACSIN2	ENST00000263246	human	ensembl	69_37n	-1	known	missense	c.249	p.W83C	1.000	pfam_FCH,smart_FCH	pfam_FCH,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_FCH,smart_SH3_domain,pfscan_FCH,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PACSIN2	HGNC	ENSG00000100266	45	0	0.00	52	21	28.77	-	-	-
PADI1	0	genome.wustl.edu	37	1	17548919	17548919	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	1	17548919	17548919	T	A	SNP	PADI1	ENST00000375471	human	ensembl	69_37n	+1	known	missense	c.227	p.M76K	0.034	pfam_PAD_N,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI1	HGNC	ENSG00000142623	71	0	0.00	40	14	25.93	-	-	-
PAH	0	genome.wustl.edu	37	12	103288660	103288660	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	12	103288660	103288660	G	A	SNP	PAH	ENST00000553106	human	ensembl	69_37n	-1	known	missense	c.205	p.P69S	1.000	pfam_ACT_dom,pirsf_Tyrosine_3-monooxygenase-like,tigrfam_Phe-4-hydroxylase_tetra	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Phe-4-hydroxylase_tetra	-	no_errors	PAH	HGNC	ENSG00000171759	118	0	0.00	65	17	20.73	-	-	-
PCDHB16	0	genome.wustl.edu	37	5	140564371	140564371	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	5	140564371	140564371	C	T	SNP	PCDHB16	ENST00000361016	human	ensembl	69_37n	+1	known	missense	c.2237	p.S746F	0.953	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963	67	0	0.00	32	38	54.29	-	-	-
PHF20	0	genome.wustl.edu	37	20	34528959	34528959	+	Silent	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	20	34528959	34528959	G	A	SNP	PHF20	ENST00000374012	human	ensembl	69_37n	+1	known	silent	c.2886	p.K962	1.000	NULL	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_C2H2	-	no_errors	PHF20	HGNC	ENSG00000025293	65	0	0.00	27	26	49.06	-	-	-
PMFBP1	0	genome.wustl.edu	37	16	72166723	72166723	+	Silent	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	16	72166723	72166723	C	T	SNP	PMFBP1	ENST00000537465	human	ensembl	69_37n	-1	known	silent	c.1371	p.E457	0.006	NULL	NULL	-	no_errors	PMFBP1	HGNC	ENSG00000118557	127	0	0.00	105	41	28.08	-	-	-
PTPRJ	0	genome.wustl.edu	37	11	48149442	48149442	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	11	48149442	48149442	C	T	SNP	PTPRJ	ENST00000418331	human	ensembl	69_37n	+1	known	missense	c.1204	p.H402Y	0.003	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177	87	0	0.00	36	4	10.00	-	-	-
QTRTD1	0	genome.wustl.edu	37	3	113785093	113785093	+	Silent	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	3	113785093	113785093	C	G	SNP	QTRTD1	ENST00000281273	human	ensembl	69_37n	+1	known	silent	c.219	p.V73	1.000	superfamily_tRNA_ribo_trans	pfam_tRNA_ribo_trans,superfamily_tRNA_ribo_trans,tigrfam_tRNA_ribo_trans	-	no_errors	QTRTD1	HGNC	ENSG00000151576	257	0	0.00	126	56	30.77	-	-	-
RAB11FIP1	0	genome.wustl.edu	37	8	37720609	37720609	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	8	37720609	37720609	G	C	SNP	RAB11FIP1	ENST00000330843	human	ensembl	69_37n	-1	known	missense	c.3656	p.A1219G	0.970	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	RAB11FIP1	HGNC	ENSG00000156675	135	0	0.00	94	18	16.07	-	-	-
RAD54B	0	genome.wustl.edu	37	8	95399325	95399325	+	Silent	SNP	T	T	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	8	95399325	95399325	T	C	SNP	RAD54B	ENST00000336148	human	ensembl	69_37n	-1	known	silent	c.1872	p.L624	0.000	pfam_HDA_complex_subunit-2/3	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_HDA_complex_subunit-2/3,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54B	HGNC	ENSG00000197275	202	0	0.00	281	52	15.57	-	-	-
RGS22	0	genome.wustl.edu	37	8	101078504	101078504	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	8	101078504	101078504	T	-	DEL	RGS22	ENST00000360863	human	ensembl	69_37n	-1	known	frame_shift_del	c.615	p.D206fs	1.000	NULL	pfam_Regulat_G_prot_signal,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal,pfscan_Regulat_G_prot_signal	-	no_errors	RGS22	HGNC	ENSG00000132554	149	0	0.00	186	40	17.54	-	-	-
RSPH6A	0	genome.wustl.edu	37	19	46299287	46299287	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	19	46299287	46299287	A	C	SNP	RSPH6A	ENST00000221538	human	ensembl	69_37n	-1	known	missense	c.1994	p.I665S	0.587	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941	90	0	0.00	83	13	13.54	-	-	-
SDK1	0	genome.wustl.edu	37	7	4285355	4285355	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	7	4285355	4285355	A	G	SNP	SDK1	ENST00000404826	human	ensembl	69_37n	+1	known	missense	c.6299	p.D2100G	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	SDK1	HGNC	ENSG00000146555	57	0	0.00	14	16	53.33	-	-	-
SH3BP4	0	genome.wustl.edu	37	2	235950855	235950855	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	2	235950855	235950855	C	G	SNP	SH3BP4	ENST00000344528	human	ensembl	69_37n	+1	known	missense	c.1442	p.P481R	1.000	NULL	pfam_SH3_2,pfam_SH3_domain,pfam_ZU5,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	SH3BP4	HGNC	ENSG00000130147	47	0	0.00	28	15	34.88	-	-	-
SIK2	0	genome.wustl.edu	37	11	111594680	111594680	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	11	111594680	111594680	G	A	SNP	SIK2	ENST00000304987	human	ensembl	69_37n	+1	known	missense	c.2608	p.D870N	1.000	pirsf_Ser/Thr_kinase_SIK1/2	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SIK2	HGNC	ENSG00000170145	68	0	0.00	71	22	23.66	-	-	-
SLC6A3	0	genome.wustl.edu	37	5	1406352	1406352	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	5	1406352	1406352	C	G	SNP	SLC6A3	ENST00000270349	human	ensembl	69_37n	-1	known	missense	c.1550	p.S517T	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_dopamine	-	no_errors	SLC6A3	HGNC	ENSG00000142319	10	0	0.00	6	14	70.00	-	-	-
SLC7A4	0	genome.wustl.edu	37	22	21385708	21385708	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	22	21385708	21385708	C	T	SNP	SLC7A4	ENST00000382932	human	ensembl	69_37n	-1	known	missense	c.394	p.A132T	0.978	pfam_AA-permease_dom,pirsf_AA/rel_permease1	pfam_AA-permease_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A4	HGNC	ENSG00000099960	24	0	0.00	10	5	33.33	-	-	-
SOAT1	0	genome.wustl.edu	37	1	179308636	179308636	+	Silent	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	1	179308636	179308636	C	T	SNP	SOAT1	ENST00000367619	human	ensembl	69_37n	+1	known	silent	c.453	p.L151	1.000	NULL	pfam_MBOAT_fam	-	no_errors	SOAT1	HGNC	ENSG00000057252	247	0	0.00	198	57	22.35	-	-	-
TP53	0	genome.wustl.edu	37	17	7578554	7578554	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	17	7578554	7578554	A	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.376	p.Y126N	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	80	0	0.00	21	33	61.11	-	-	-
TPD52L2	0	genome.wustl.edu	37	20	62520553	62520553	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	20	62520553	62520553	A	C	SNP	TPD52L2	ENST00000217121	human	ensembl	69_37n	+1	known	missense	c.556	p.T186P	0.962	pfam_TPD52	pfam_TPD52	-	no_errors	TPD52L2	HGNC	ENSG00000101150	186	1	0.53	107	97	47.32	-	-	-
TPSB2	0	genome.wustl.edu	37	16	1279650	1279650	+	Silent	SNP	G	G	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	16	1279650	1279650	G	C	SNP	TPSB2	ENST00000430512	human	ensembl	69_37n	-1	known	silent	c.150	p.V50	0.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	TPSB2	HGNC	ENSG00000197253	40	0	0.00	9	24	70.59	-	-	-
TRHDE	0	genome.wustl.edu	37	12	72956000	72956000	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	12	72956000	72956000	C	T	SNP	TRHDE	ENST00000261180	human	ensembl	69_37n	+1	known	missense	c.1709	p.T570I	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	65	0	0.00	47	19	28.79	-	-	-
TRIM51HP	0	genome.wustl.edu	37	11	55065515	55065515	+	RNA	SNP	G	G	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	11	55065515	55065515	G	T	SNP	TRIM51HP	ENST00000526016	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.232	-	-	-	no_errors	TRIM51HP	HGNC	ENSG00000166007	26	0	0.00	21	12	36.36	-	-	-
TRIM52	0	genome.wustl.edu	37	5	180687133	180687133	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	5	180687133	180687133	A	C	SNP	TRIM52	ENST00000327767	human	ensembl	69_37n	-1	known	missense	c.682	p.F228V	0.002	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM52	HGNC	ENSG00000183718	82	0	0.00	18	15	45.45	-	-	-
TRIM67	0	genome.wustl.edu	37	1	231335936	231335936	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	1	231335936	231335936	C	T	SNP	TRIM67	ENST00000366652	human	ensembl	69_37n	+1	known	nonsense	c.1306	p.Q436*	1.000	smart_Bbox_C	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM67	HGNC	ENSG00000119283	78	0	0.00	89	20	18.35	-	-	-
USH2A	0	genome.wustl.edu	37	1	215847722	215847722	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	1	215847722	215847722	C	A	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.13531	p.A4511S	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	109	0	0.00	82	34	29.06	-	-	-
VPS26B	0	genome.wustl.edu	37	11	134115368	134115368	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	11	134115368	134115368	G	A	SNP	VPS26B	ENST00000281187	human	ensembl	69_37n	+1	known	missense	c.895	p.V299I	1.000	NULL	pfam_VPS26,superfamily_Ig_E-set	-	no_errors	VPS26B	HGNC	ENSG00000151502	101	0	0.00	29	32	52.46	-	-	-
YLPM1	0	genome.wustl.edu	37	14	75248373	75248373	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	14	75248373	75248373	C	A	SNP	YLPM1	ENST00000325680	human	ensembl	69_37n	+1	known	missense	c.1627	p.P543T	1.000	NULL	superfamily_FH2_actin-bd	-	no_errors	YLPM1	HGNC	ENSG00000119596	248	0	0.00	62	63	50.40	-	-	-
ZBTB11	0	genome.wustl.edu	37	3	101370349	101370349	+	Silent	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	3	101370349	101370349	C	T	SNP	ZBTB11	ENST00000312938	human	ensembl	69_37n	-1	known	silent	c.2823	p.V941	1.000	pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB11	HGNC	ENSG00000066422	131	0	0.00	50	9	15.25	-	-	-
ZFAT	0	genome.wustl.edu	37	8	135622886	135622886	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	8	135622886	135622886	T	C	SNP	ZFAT	ENST00000377838	human	ensembl	69_37n	-1	known	missense	c.461	p.D154G	0.999	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827	192	0	0.00	314	43	12.01	-	-	-
ZFHX3	0	genome.wustl.edu	37	16	72830766	72830766	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	16	72830766	72830766	C	G	SNP	ZFHX3	ENST00000268489	human	ensembl	69_37n	-1	known	missense	c.5815	p.D1939H	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836	130	0	0.00	78	30	27.78	-	-	-
ZNF208	0	genome.wustl.edu	37	19	22171632	22171632	+	Nonsense_Mutation	SNP	A	A	C			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	19	22171632	22171632	A	C	SNP	ZNF208	ENST00000397126	human	ensembl	69_37n	-1	known	nonsense	c.83	p.L28*	0.007	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	316	0	0.00	332	85	20.38	-	-	-
ZNF219	0	genome.wustl.edu	37	14	21560535	21560535	+	Silent	SNP	G	G	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	14	21560535	21560535	G	A	SNP	ZNF219	ENST00000360947	human	ensembl	69_37n	-1	known	silent	c.921	p.C307	0.981	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2,prints_Histamine_H3_recept	-	no_errors	ZNF219	HGNC	ENSG00000165804	25	0	0.00	8	10	55.56	-	-	-
ZNF263	0	genome.wustl.edu	37	16	3339518	3339518	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	16	3339518	3339518	C	T	SNP	ZNF263	ENST00000219069	human	ensembl	69_37n	+1	known	missense	c.1012	p.H338Y	0.236	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF263	HGNC	ENSG00000006194	33	0	0.00	33	9	21.43	-	-	-
ZNF568	0	genome.wustl.edu	37	19	37427682	37427682	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1XW-01A-11D-A14K-09	TCGA-D8-A1XW-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f29405cc-d712-4562-ac02-ca3c89fb82af	df416cf7-8ddc-4ee0-b925-78a7e849ad84	19	37427682	37427682	T	A	SNP	ZNF568	ENST00000333987	human	ensembl	69_37n	+1	known	missense	c.170	p.L57H	0.987	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF568	HGNC	ENSG00000198453	143	0	0.00	89	22	19.82	-	-	-
