Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS17	0	genome.wustl.edu	37	15	100672248	100672248	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	15	100672248	100672248	C	T	SNP	ADAMTS17	ENST00000268070	human	ensembl	69_37n	-1	known	missense	c.1685	p.G562E	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS	pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS17	HGNC	ENSG00000140470	43	0	0.00	22	9	29.03	-	-	-
ALG8	0	genome.wustl.edu	37	11	77812019	77812019	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	11	77812019	77812019	C	T	SNP	ALG8	ENST00000530608	human	ensembl	69_37n	-1	novel	missense	c.677	p.R226K	0.994	NULL	pfam_Glyco_trans_ALG6/ALG8	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ALG8	HGNC	ENSG00000159063	90	0	0.00	64	23	26.44	-	-	-
ANTXR1	0	genome.wustl.edu	37	2	69472437	69472437	+	Silent	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	2	69472437	69472437	G	A	SNP	ANTXR1	ENST00000303714	human	ensembl	69_37n	+1	known	silent	c.1515	p.S505	0.111	NULL	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_extracel,pfam_Anthrax_toxin_rcpt_C,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR1	HGNC	ENSG00000169604	143	0	0.00	116	41	26.11	-	-	-
ATP13A5	0	genome.wustl.edu	37	3	193068973	193068974	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	3	193068973	193068974	AT	-	DEL	ATP13A5	ENST00000342358	human	ensembl	69_37n	-1	known	frame_shift_del	c.624_623	p.Y208fs	0.891:0.997	pfam_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_unknown-pump-sp	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_cation-exchng_asu,tigrfam_ATPase_P-typ_unknown-pump-sp,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP13A5	HGNC	ENSG00000187527	61	0	0.00	94	17	15.32	-	-	-
ATP7B	0	genome.wustl.edu	37	13	52548306	52548306	+	Silent	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	13	52548306	52548306	C	T	SNP	ATP7B	ENST00000242839	human	ensembl	69_37n	-1	known	silent	c.1050	p.P350	0.000	NULL	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,pfam_HAD-SF_hydro-like_3,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_ATPase_P-typ_cat/Cu-transptr,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_H-transp,tigrfam_ATPase_P-typ_heavy-metal,tigrfam_ATPase_P-typ_ion-transptr,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7B	HGNC	ENSG00000123191	49	0	0.00	21	11	34.38	-	-	-
C1orf173	0	genome.wustl.edu	37	1	75037178	75037178	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	1	75037178	75037178	C	T	SNP	C1orf173	ENST00000326665	human	ensembl	69_37n	-1	known	missense	c.4216	p.E1406K	0.782	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965	66	0	0.00	43	46	51.69	-	-	-
CAMK4	0	genome.wustl.edu	37	5	110679796	110679796	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	5	110679796	110679796	A	C	SNP	CAMK4	ENST00000282356	human	ensembl	69_37n	+1	known	missense	c.236	p.K79T	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CAMK4	HGNC	ENSG00000152495	93	0	0.00	73	14	16.09	-	-	-
CNTROB	0	genome.wustl.edu	37	17	7847523	7847523	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	17	7847523	7847523	C	T	SNP	CNTROB	ENST00000380262	human	ensembl	69_37n	+1	known	nonsense	c.1528	p.R510*	0.881	NULL	NULL	-	no_errors	CNTROB	HGNC	ENSG00000170037	33	0	0.00	25	11	30.56	-	-	-
DAB2	0	genome.wustl.edu	37	5	39383203	39383203	+	Silent	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	5	39383203	39383203	G	A	SNP	DAB2	ENST00000320816	human	ensembl	69_37n	-1	known	silent	c.858	p.F286	1.000	NULL	pfam_PTyr_interaction_dom,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom	-	no_errors	DAB2	HGNC	ENSG00000153071	106	0	0.00	93	51	35.42	-	-	-
DIP2A	0	genome.wustl.edu	37	21	47918525	47918525	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	21	47918525	47918525	C	G	SNP	DIP2A	ENST00000318711	human	ensembl	69_37n	+1	known	missense	c.434	p.S145C	1.000	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305	54	0	0.00	47	24	33.80	-	-	-
DIP2B	0	genome.wustl.edu	37	12	51112558	51112558	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	12	51112558	51112558	G	T	SNP	DIP2B	ENST00000301180	human	ensembl	69_37n	+1	known	missense	c.2918	p.G973V	1.000	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2B	HGNC	ENSG00000066084	133	1	0.75	234	64	21.48	-	-	-
EHMT1	0	genome.wustl.edu	37	9	140672412	140672412	+	Silent	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	9	140672412	140672412	G	A	SNP	EHMT1	ENST00000460843	human	ensembl	69_37n	+1	known	silent	c.2097	p.T699	0.000	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT1	HGNC	ENSG00000181090	43	0	0.00	19	11	36.67	-	-	-
FN1	0	genome.wustl.edu	37	2	216262532	216262532	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	2	216262532	216262532	C	A	SNP	FN1	ENST00000354785	human	ensembl	69_37n	-1	known	nonsense	c.3388	p.E1130*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414	108	0	0.00	79	17	17.53	-	-	-
GUSB	0	genome.wustl.edu	37	7	65439687	65439687	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	7	65439687	65439687	C	T	SNP	GUSB	ENST00000304895	human	ensembl	69_37n	-1	known	missense	c.1070	p.R357Q	1.000	pfam_Glyco_hydro_2_TIM,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_2_TIM,pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_Ig-like,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like,prints_Glyco_hydro_2	-	no_errors	GUSB	HGNC	ENSG00000169919	33	0	0.00	22	13	37.14	-	-	-
HRH1	0	genome.wustl.edu	37	3	11301339	11301339	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	3	11301339	11301339	A	G	SNP	HRH1	ENST00000397056	human	ensembl	69_37n	+1	known	missense	c.616	p.M206V	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Histamine_H1_recept,prints_7TM_GPCR_Rhodpsn,prints_Musac_rcpt,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	HRH1	HGNC	ENSG00000196639	191	0	0.00	137	29	17.47	-	-	-
KIF26B	0	genome.wustl.edu	37	1	245582982	245582982	+	Silent	SNP	G	G	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	1	245582982	245582982	G	T	SNP	KIF26B	ENST00000407071	human	ensembl	69_37n	+1	known	silent	c.1101	p.S367	0.012	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849	61	0	0.00	29	70	70.71	-	-	-
KIR3DL3	0	genome.wustl.edu	37	19	55246750	55246750	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	19	55246750	55246750	G	T	SNP	KIR3DL3	ENST00000291860	human	ensembl	69_37n	+1	known	missense	c.980	p.G327V	0.006	NULL	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2	-	no_errors	KIR3DL3	HGNC	ENSG00000242019	745	0	0.00	573	277	32.59	-	-	-
LRRC2	0	genome.wustl.edu	37	3	46560544	46560544	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	3	46560544	46560544	G	A	SNP	LRRC2	ENST00000296144	human	ensembl	69_37n	-1	known	missense	c.1076	p.P359L	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC2	HGNC	ENSG00000163827	112	0	0.00	75	20	21.05	-	-	-
MAP2K4	0	genome.wustl.edu	37	17	12032481	12032481	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	17	12032481	12032481	C	G	SNP	MAP2K4	ENST00000415385	human	ensembl	69_37n	+1	known	missense	c.950	p.P317R	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP2K4	HGNC	ENSG00000065559	52	0	0.00	21	19	47.50	-	-	-
MAPK6	0	genome.wustl.edu	37	15	52356190	52356190	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	15	52356190	52356190	G	T	SNP	MAPK6	ENST00000261845	human	ensembl	69_37n	+1	known	missense	c.1159	p.D387Y	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_MAPK_ERK3/4	-	no_errors	MAPK6	HGNC	ENSG00000069956	96	0	0.00	81	26	24.07	-	-	-
MCCC1	0	genome.wustl.edu	37	3	182810273	182810273	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	3	182810273	182810273	C	T	SNP	MCCC1	ENST00000265594	human	ensembl	69_37n	-1	known	missense	c.197	p.R66H	0.997	pfam_CarbamoylP_synth_lsu_N,superfamily_PreATP-grasp_fold,pfscan_Biotin_carboxylation_dom	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_DUF201-type,superfamily_PreATP-grasp_fold,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_Biotin_lipoyl	-	no_errors	MCCC1	HGNC	ENSG00000078070	131	0	0.00	177	27	13.24	-	-	-
MGAM	0	genome.wustl.edu	37	7	141755462	141755462	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	7	141755462	141755462	G	T	SNP	MGAM	ENST00000549489	human	ensembl	69_37n	+1	known	missense	c.3419	p.R1140M	0.057	superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	122	0	0.00	88	45	33.83	-	-	-
MST1P9	0	genome.wustl.edu	37	1	17085795	17085795	+	Silent	SNP	G	G	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	1	17085795	17085795	G	T	SNP	MST1P9	ENST00000334998	human	ensembl	69_37n	-1	known	silent	c.1026	p.I342	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	MST1P9	HGNC	ENSG00000186715	31	0	0.00	17	3	15.00	-	-	-
MST1P9	0	genome.wustl.edu	37	1	17086870	17086870	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	1	17086870	17086870	T	C	SNP	MST1P9	ENST00000334998	human	ensembl	69_37n	-1	known	missense	c.454	p.S152G	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	MST1P9	HGNC	ENSG00000186715	28	0	0.00	24	8	25.00	-	-	-
OR2T2	0	genome.wustl.edu	37	1	248616764	248616764	+	Silent	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	1	248616764	248616764	C	T	SNP	OR2T2	ENST00000342927	human	ensembl	69_37n	+1	known	silent	c.666	p.I222	0.001	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240	101	1	0.98	35	10	22.22	-	-	-
PHLDA1	0	genome.wustl.edu	37	12	76424952	76424952	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	12	76424952	76424952	C	G	SNP	PHLDA1	ENST00000266671	human	ensembl	69_37n	-1	known	missense	c.570	p.Q190H	0.996	smart_Pleckstrin_homology	smart_Pleckstrin_homology	-	no_errors	PHLDA1	HGNC	ENSG00000139289	20	0	0.00	17	5	22.73	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	82	0	0.00	70	44	38.60	-	-	-
PIPSL	0	genome.wustl.edu	37	10	95718978	95718978	+	RNA	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	10	95718978	95718978	C	T	SNP	PIPSL	ENST00000480546	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.998	-	-	-	no_errors	PIPSL	HGNC	ENSG00000180764	38	0	0.00	47	8	14.55	-	-	-
PPP1R26	0	genome.wustl.edu	37	9	138378571	138378571	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	9	138378571	138378571	C	T	SNP	PPP1R26	ENST00000356818	human	ensembl	69_37n	+1	known	missense	c.2215	p.R739W	0.119	NULL	NULL	-	no_errors	PPP1R26	HGNC	ENSG00000196422	10	0	0.00	4	4	50.00	-	-	-
PRSS8	0	genome.wustl.edu	37	16	31143759	31143759	+	Silent	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	16	31143759	31143759	G	A	SNP	PRSS8	ENST00000317508	human	ensembl	69_37n	-1	known	silent	c.696	p.D232	0.974	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6	-	no_errors	PRSS8	HGNC	ENSG00000052344	60	0	0.00	93	34	26.77	-	-	-
SCN9A	0	genome.wustl.edu	37	2	167055875	167055875	+	Silent	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	2	167055875	167055875	G	A	SNP	SCN9A	ENST00000303354	human	ensembl	69_37n	-1	known	silent	c.5277	p.V1759	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	132	0	0.00	124	28	18.42	-	-	-
SERPING1	0	genome.wustl.edu	37	11	57367733	57367733	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	11	57367733	57367733	G	A	SNP	SERPING1	ENST00000278407	human	ensembl	69_37n	+1	known	missense	c.433	p.A145T	0.399	pfam_Sepin_dom,superfamily_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPING1	HGNC	ENSG00000149131	111	0	0.00	141	40	22.10	-	-	-
SHANK1	0	genome.wustl.edu	37	19	51217199	51217199	+	Silent	SNP	G	G	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	19	51217199	51217199	G	T	SNP	SHANK1	ENST00000391814	human	ensembl	69_37n	-1	known	silent	c.648	p.P216	0.888	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	35	0	0.00	31	7	18.42	-	-	-
SLC35A2	0	genome.wustl.edu	37	X	48761929	48761929	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	X	48761929	48761929	G	A	SNP	SLC35A2	ENST00000445167	human	ensembl	69_37n	-1	known	missense	c.667	p.R223C	0.000	NULL	pfam_Nuc_sug_transpt	-	no_errors	SLC35A2	HGNC	ENSG00000102100	43	0	0.00	44	11	20.00	-	-	-
SPHKAP	0	genome.wustl.edu	37	2	228881454	228881454	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	2	228881454	228881454	C	A	SNP	SPHKAP	ENST00000392056	human	ensembl	69_37n	-1	known	missense	c.4116	p.R1372S	0.022	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	61	0	0.00	62	13	17.33	-	-	-
SPTB	0	genome.wustl.edu	37	14	65239968	65239968	+	Silent	SNP	C	C	T			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	14	65239968	65239968	C	T	SNP	SPTB	ENST00000389722	human	ensembl	69_37n	-1	known	silent	c.5148	p.P1716	0.384	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	76	0	0.00	62	10	13.89	-	-	-
UEVLD	0	genome.wustl.edu	37	11	18566328	18566328	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	11	18566328	18566328	T	C	SNP	UEVLD	ENST00000396197	human	ensembl	69_37n	-1	known	missense	c.902	p.Y301C	0.971	pfam_Lactate/malate_DH_N,prints_L-lactate/malate_DH	pfam_UEV_N,pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Lactate_DH/Glyco_Ohase_4_C,prints_L-lactate/malate_DH	-	no_errors	UEVLD	HGNC	ENSG00000151116	96	0	0.00	96	27	21.95	-	-	-
UGT8	0	genome.wustl.edu	37	4	115586882	115586883	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	4	115586882	115586883	AT	-	DEL	UGT8	ENST00000310836	human	ensembl	69_37n	+1	known	frame_shift_del	c.1012_1013	p.I338fs	0.998:1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT8	HGNC	ENSG00000174607	167	0	0.00	117	36	23.23	-	-	-
USP34	0	genome.wustl.edu	37	2	61416190	61416190	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	2	61416190	61416190	G	C	SNP	USP34	ENST00000411912	human	ensembl	69_37n	-1	novel	missense	c.2917	p.R973G	0.998	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	USP34	HGNC	ENSG00000115464	151	0	0.00	115	34	22.82	-	-	-
VSIG10L	0	genome.wustl.edu	37	19	51837454	51837454	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	19	51837454	51837454	G	A	SNP	VSIG10L	ENST00000335624	human	ensembl	69_37n	-1	known	missense	c.2410	p.R804C	0.026	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	VSIG10L	HGNC	ENSG00000186806	40	0	0.00	43	13	23.21	-	-	-
YJEFN3	0	genome.wustl.edu	37	19	19645891	19645891	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	19	19645891	19645891	G	A	SNP	YJEFN3	ENST00000514277	human	ensembl	69_37n	+1	known	missense	c.367	p.V123M	0.962	pfam_YjeF_N,superfamily_YjeF_N,tigrfam_YjeF_N	pfam_YjeF_N,superfamily_YjeF_N,tigrfam_YjeF_N	-	no_errors	YJEFN3	HGNC	ENSG00000250067	59	0	0.00	46	12	20.69	-	-	-
ZFP37	0	genome.wustl.edu	37	9	115806351	115806351	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	9	115806351	115806351	T	A	SNP	ZFP37	ENST00000553380	human	ensembl	69_37n	-1	known	missense	c.592	p.I198F	0.267	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP37	HGNC	ENSG00000136866	120	0	0.00	98	31	24.03	-	-	-
ZNF10	0	genome.wustl.edu	37	12	133733005	133733005	+	Missense_Mutation	SNP	T	T	G			TCGA-D8-A1XY-01A-11D-A14K-09	TCGA-D8-A1XY-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	edb6d161-8f50-4c11-8246-487c4ea9a55d	8dea96d9-5017-4872-a84e-33bfd2f37b7a	12	133733005	133733005	T	G	SNP	ZNF10	ENST00000248211	human	ensembl	69_37n	+1	known	missense	c.1173	p.H391Q	0.400	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF10	HGNC	ENSG00000256223	42	0	0.00	43	9	16.98	-	-	-
