Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCG1	0	genome.wustl.edu	37	21	43645822	43645822	+	Silent	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	21	43645822	43645822	G	A	SNP	ABCG1	ENST00000361802	human	ensembl	69_37n	+1	known	silent	c.84	p.S28	0.008	NULL	pfam_ABC_2_trans,pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Pigment_permease	-	no_errors	ABCG1	HGNC	ENSG00000160179	95	0	0.00	30	29	49.15	-	-	-
ADAMTS20	0	genome.wustl.edu	37	12	43833862	43833862	+	Silent	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	12	43833862	43833862	G	A	SNP	ADAMTS20	ENST00000389420	human	ensembl	69_37n	-1	known	silent	c.2301	p.D767	0.172	pfam_ADAM_spacer1	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	62	0	0.00	30	11	26.83	-	-	-
ADARB2	0	genome.wustl.edu	37	10	1279721	1279721	+	Silent	SNP	T	T	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	10	1279721	1279721	T	C	SNP	ADARB2	ENST00000381312	human	ensembl	69_37n	-1	known	silent	c.1428	p.R476	0.529	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_Ds-RNA-bd,smart_Ds-RNA-bd,smart_A_deamin,pfscan_Ds-RNA-bd,pfscan_A_deamin	-	no_errors	ADARB2	HGNC	ENSG00000185736	52	0	0.00	48	11	18.64	-	-	-
ADH5	0	genome.wustl.edu	37	4	100003129	100003129	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	4	100003129	100003129	C	T	SNP	ADH5	ENST00000296412	human	ensembl	69_37n	-1	known	missense	c.253	p.A85T	0.725	pfam_ADH_GroES-like,superfamily_GroES-like,tigrfam_ADH_3	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,tigrfam_ADH_3	-	no_errors	ADH5	HGNC	ENSG00000197894	116	0	0.00	44	19	30.16	-	-	-
ARID5B	0	genome.wustl.edu	37	10	63759999	63759999	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	10	63759999	63759999	A	T	SNP	ARID5B	ENST00000279873	human	ensembl	69_37n	+1	known	missense	c.652	p.R218W	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID5B	HGNC	ENSG00000150347	60	0	0.00	23	12	34.29	-	-	-
C7orf63	0	genome.wustl.edu	37	7	89933315	89933315	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	7	89933315	89933315	G	T	SNP	C7orf63	ENST00000389297	human	ensembl	69_37n	+1	known	nonsense	c.2083	p.E695*	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792	92	0	0.00	35	10	22.22	-	-	-
CACNA1E	0	genome.wustl.edu	37	1	181685255	181685255	+	Silent	SNP	C	C	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	181685255	181685255	C	A	SNP	CACNA1E	ENST00000367573	human	ensembl	69_37n	+1	known	silent	c.1305	p.I435	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_HAND_2,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	79	0	0.00	33	13	28.26	-	-	-
CDAN1	0	genome.wustl.edu	37	15	43025328	43025328	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	15	43025328	43025328	C	T	SNP	CDAN1	ENST00000356231	human	ensembl	69_37n	-1	known	nonsense	c.1424	p.W475*	1.000	NULL	NULL	-	no_errors	CDAN1	HGNC	ENSG00000140326	85	0	0.00	33	4	10.81	-	-	-
CEP250	0	genome.wustl.edu	37	20	34091216	34091216	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	20	34091216	34091216	G	T	SNP	CEP250	ENST00000397527	human	ensembl	69_37n	+1	known	missense	c.5019	p.Q1673H	0.936	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001	37	0	0.00	12	35	74.47	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16949316	16949316	+	RNA	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	16949316	16949316	G	A	SNP	CROCCP2	ENST00000421700	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.121	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	9	0	0.00	21	6	22.22	-	-	-
DCP1A	0	genome.wustl.edu	37	3	53326791	53326791	+	RNA	DEL	G	G	-			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	3	53326791	53326791	G	-	DEL	DCP1A	ENST00000294241	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DCP1A	HGNC	ENSG00000162290	44	0	0.00	12	2	14.29	-	-	-
ELL2	0	genome.wustl.edu	37	5	95242412	95242412	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	5	95242412	95242412	T	C	SNP	ELL2	ENST00000237853	human	ensembl	69_37n	-1	known	missense	c.556	p.M186V	1.000	pfam_RNA_pol_II_elong_fac_ELL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL2	HGNC	ENSG00000118985	118	0	0.00	30	30	50.00	-	-	-
FAM157B	0	genome.wustl.edu	37	9	141107536	141107537	+	RNA	INS	-	-	GCA			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	9	141107536	141107537	-	GCA	INS	FAM157B	ENST00000446912	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.033:0.036	-	-	-	no_errors	FAM157B	HGNC	ENSG00000233013	23	0	0.00	26	8	23.53	-	-	-
FCHO1	0	genome.wustl.edu	37	19	17887068	17887068	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	19	17887068	17887068	C	T	SNP	FCHO1	ENST00000252771	human	ensembl	69_37n	+1	known	missense	c.1195	p.R399C	1.000	NULL	pfam_Muniscin_C-term_mu_dom,pfam_FCH,superfamily_Clathrin_mu_C,smart_FCH,pfscan_FCH	-	no_errors	FCHO1	HGNC	ENSG00000130475	90	0	0.00	43	16	26.67	-	-	-
FGF3	0	genome.wustl.edu	37	11	69625283	69625283	+	Silent	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	11	69625283	69625283	G	A	SNP	FGF3	ENST00000334134	human	ensembl	69_37n	-1	known	silent	c.510	p.R170	0.999	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_GF_heparin-bd,prints_IL1_HBGF	-	no_errors	FGF3	HGNC	ENSG00000186895	20	0	0.00	30	6	16.67	-	-	-
GFPT1	0	genome.wustl.edu	37	2	69569326	69569326	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	2	69569326	69569326	C	G	SNP	GFPT1	ENST00000357308	human	ensembl	69_37n	-1	known	missense	c.1161	p.L387F	1.000	pfam_SIS,tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT1	HGNC	ENSG00000198380	87	0	0.00	36	13	26.53	-	-	-
GSTM4	0	genome.wustl.edu	37	1	110201636	110201636	+	Missense_Mutation	SNP	T	T	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	110201636	110201636	T	G	SNP	GSTM4	ENST00000369836	human	ensembl	69_37n	+1	known	missense	c.471	p.D157E	1.000	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_GST_mu	-	no_errors	GSTM4	HGNC	ENSG00000168765	175	0	0.00	61	16	20.78	-	-	-
GSTM4	0	genome.wustl.edu	37	1	110201637	110201637	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	110201637	110201637	T	A	SNP	GSTM4	ENST00000369836	human	ensembl	69_37n	+1	known	missense	c.472	p.F158I	1.000	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_GST_mu	-	no_errors	GSTM4	HGNC	ENSG00000168765	175	0	0.00	62	14	18.42	-	-	-
HEATR5A	0	genome.wustl.edu	37	14	31792818	31792818	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	14	31792818	31792818	T	A	SNP	HEATR5A	ENST00000389961	human	ensembl	69_37n	-1	known	missense	c.3722	p.H1241L	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	HEATR5A	HGNC	ENSG00000129493	127	0	0.00	45	16	26.23	-	-	-
HIVEP3	0	genome.wustl.edu	37	1	42049672	42049672	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	42049672	42049672	T	C	SNP	HIVEP3	ENST00000247584	human	ensembl	69_37n	-1	known	missense	c.797	p.E266G	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124	58	0	0.00	23	11	32.35	-	-	-
HSD17B7P2	0	genome.wustl.edu	37	10	38652501	38652501	+	RNA	SNP	A	A	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	10	38652501	38652501	A	T	SNP	HSD17B7P2	ENST00000494540	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSD17B7P2	HGNC	ENSG00000099251	97	0	0.00	45	21	31.82	-	-	-
KCNB2	0	genome.wustl.edu	37	8	73848355	73848355	+	Silent	SNP	A	A	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	8	73848355	73848355	A	G	SNP	KCNB2	ENST00000523207	human	ensembl	69_37n	+1	known	silent	c.765	p.S255	0.921	pfam_Ion_trans_dom,prints_K_chnl	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674	94	0	0.00	88	18	16.82	-	-	-
KIF26B	0	genome.wustl.edu	37	1	245851145	245851145	+	Silent	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	245851145	245851145	C	T	SNP	KIF26B	ENST00000407071	human	ensembl	69_37n	+1	known	silent	c.4860	p.G1620	0.988	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849	12	0	0.00	27	7	20.59	-	-	-
KXD1	0	genome.wustl.edu	37	19	18679394	18679394	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	19	18679394	18679394	A	T	SNP	KXD1	ENST00000222307	human	ensembl	69_37n	+1	known	missense	c.484	p.I162F	0.462	NULL	pfam_Uncharacterised_KxDL	-	no_errors	KXD1	HGNC	ENSG00000105700	36	0	0.00	16	11	40.74	-	-	-
LRIG2	0	genome.wustl.edu	37	1	113616189	113616189	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	113616189	113616189	T	A	SNP	LRIG2	ENST00000361127	human	ensembl	69_37n	+1	known	missense	c.161	p.L54Q	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LRIG2	HGNC	ENSG00000198799	32	0	0.00	22	8	26.67	-	-	-
LRRC23	0	genome.wustl.edu	37	12	7014914	7014914	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	12	7014914	7014914	C	A	SNP	LRRC23	ENST00000007969	human	ensembl	69_37n	+1	known	missense	c.117	p.F39L	0.000	NULL	pfam_Leu-rich_rpt	-	no_errors	LRRC23	HGNC	ENSG00000010626	34	0	0.00	20	4	16.67	-	-	-
MAP6	0	genome.wustl.edu	37	11	75298409	75298409	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	11	75298409	75298409	C	T	SNP	MAP6	ENST00000304771	human	ensembl	69_37n	-1	known	missense	c.2137	p.V713M	0.000	NULL	pfam_STOP/FAM154	-	no_errors	MAP6	HGNC	ENSG00000171533	125	0	0.00	34	12	26.09	-	-	-
MIR24-1	0	genome.wustl.edu	37	9	97848305	97848305	+	RNA	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	9	97848305	97848305	C	T	SNP	MIR24-1	ENST00000384885	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR24-1	HGNC	ENSG00000207617	25	0	0.00	21	11	34.38	-	-	-
MTF2	0	genome.wustl.edu	37	1	93602437	93602437	+	Silent	SNP	C	C	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	93602437	93602437	C	G	SNP	MTF2	ENST00000370298	human	ensembl	69_37n	+1	known	silent	c.1635	p.L545	0.762	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MTF2	HGNC	ENSG00000143033	65	0	0.00	31	11	26.19	-	-	-
MTOR	0	genome.wustl.edu	37	1	11187116	11187116	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	11187116	11187116	C	A	SNP	MTOR	ENST00000361445	human	ensembl	69_37n	-1	known	missense	c.6302	p.W2101L	1.000	pfam_FKBP_rapamycin-assoc_FKBP12-bd,superfamily_Kinase-like_dom,superfamily_FKBP_rapamycin-assoc_FKBP12-bd	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_FKBP_rapamycin-assoc_FKBP12-bd,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_FKBP_rapamycin-assoc_FKBP12-bd,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793	100	0	0.00	27	17	38.64	-	-	-
MYH8	0	genome.wustl.edu	37	17	10298721	10298721	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	17	10298721	10298721	A	T	SNP	MYH8	ENST00000403437	human	ensembl	69_37n	-1	known	missense	c.4691	p.I1564N	0.980	pfam_Myosin_tail,superfamily_t-SNARE	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	97	0	0.00	16	10	38.46	-	-	-
NDUFV1	0	genome.wustl.edu	37	11	67377893	67377893	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	11	67377893	67377893	G	C	SNP	NDUFV1	ENST00000322776	human	ensembl	69_37n	+1	known	missense	c.552	p.K184N	0.974	pfam_NADH_UbQ_OxRdtase_51kDa_su,tigrfam_NADH-UbQ_OxRdtase_suF	pfam_NADH_UbQ_OxRdtase_51kDa_su,pfam_NADH-UbQ_OxRdtase_Fsu_4Fe4S-bd,pfam_Soluble_ligand-bd,smart_NADH-UbQ_OxRdtase_Fsu_4Fe4S-bd,tigrfam_NADH-UbQ_OxRdtase_suF	-	no_errors	NDUFV1	HGNC	ENSG00000167792	77	0	0.00	52	20	27.78	-	-	-
NINL	0	genome.wustl.edu	37	20	25481635	25481635	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	20	25481635	25481635	C	G	SNP	NINL	ENST00000278886	human	ensembl	69_37n	-1	known	missense	c.873	p.E291D	0.989	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	NINL	HGNC	ENSG00000101004	32	0	0.00	32	13	28.89	-	-	-
NKPD1	0	genome.wustl.edu	37	19	45662102	45662102	+	Silent	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	19	45662102	45662102	G	A	SNP	NKPD1	ENST00000317951	human	ensembl	69_37n	-1	known	silent	c.348	p.V116	0.069	NULL	pfam_KAP_NTPase	-	no_errors	NKPD1	HGNC	ENSG00000179846	14	0	0.00	18	9	33.33	-	-	-
NOMO2	0	genome.wustl.edu	37	16	18544464	18544464	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	16	18544464	18544464	G	T	SNP	NOMO2	ENST00000381474	human	ensembl	69_37n	-1	known	missense	c.1258	p.P420T	1.000	NULL	pfam_DUF2012,superfamily_Carb-bd-like_fold,superfamily_CarboxyPept-like_regulatory,superfamily_Collagen-bd_Cna_B-typ_dom	-	no_errors	NOMO2	HGNC	ENSG00000185164	140	0	0.00	94	20	17.54	-	-	-
NOP2	0	genome.wustl.edu	37	12	6666267	6666267	+	Silent	SNP	G	G	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	12	6666267	6666267	G	C	SNP	NOP2	ENST00000322166	human	ensembl	69_37n	-1	known	silent	c.2331	p.P777	0.000	NULL	pfam_Fmu/NOL1/Nop2p,pfam_P120R,pfam_rRNA_MeTrfase_FtsJ_dom,prints_RCMT,prints_RCMT_NOP2,tigrfam_Nop2p	-	no_errors	NOP2	HGNC	ENSG00000111641	24	0	0.00	22	5	18.52	-	-	-
NUP210	0	genome.wustl.edu	37	3	13364839	13364839	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	3	13364839	13364839	C	T	SNP	NUP210	ENST00000254508	human	ensembl	69_37n	-1	known	missense	c.4738	p.A1580T	0.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	79	0	0.00	36	9	20.00	-	-	-
OR2J1	0	genome.wustl.edu	37	6	29069001	29069001	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	6	29069001	29069001	T	-	DEL	OR2J1	ENST00000377171	human	ensembl	69_37n	+1	known	frame_shift_del	c.282	p.Y95fs	0.169	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2J1	HGNC	ENSG00000204702	67	0	0.00	13	2	13.33	-	-	-
OR5D13	0	genome.wustl.edu	37	11	55541620	55541620	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	11	55541620	55541620	G	A	SNP	OR5D13	ENST00000361760	human	ensembl	69_37n	+1	known	missense	c.707	p.R236H	0.003	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5D13	HGNC	ENSG00000198877	90	0	0.00	27	17	36.96	-	-	-
OTOF	0	genome.wustl.edu	37	2	26739336	26739336	+	Silent	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	2	26739336	26739336	G	A	SNP	OTOF	ENST00000272371	human	ensembl	69_37n	-1	known	silent	c.459	p.L153	0.839	NULL	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	OTOF	HGNC	ENSG00000115155	43	0	0.00	23	13	36.11	-	-	-
PCDHA9	0	genome.wustl.edu	37	5	140230345	140230345	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	5	140230345	140230345	G	T	SNP	PCDHA9	ENST00000532602	human	ensembl	69_37n	+1	known	missense	c.2265	p.R755S	0.040	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961	33	0	0.00	46	12	20.69	-	-	-
PCDHB11	0	genome.wustl.edu	37	5	140580879	140580879	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	5	140580879	140580879	G	C	SNP	PCDHB11	ENST00000354757	human	ensembl	69_37n	+1	known	missense	c.1532	p.G511A	0.975	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479	30	0	0.00	29	19	38.78	-	-	-
PCNXL3	0	genome.wustl.edu	37	11	65384797	65384797	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	11	65384797	65384797	G	C	SNP	PCNXL3	ENST00000355703	human	ensembl	69_37n	+1	known	missense	c.418	p.V140L	0.992	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136	103	0	0.00	48	21	30.43	-	-	-
PDCD6IP	0	genome.wustl.edu	37	3	33895477	33895477	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	3	33895477	33895477	T	-	DEL	PDCD6IP	ENST00000457054	human	ensembl	69_37n	+1	known	frame_shift_del	c.2012	p.V672fs	1.000	NULL	pfam_BRO1_dom,pfscan_BRO1_dom	-	no_errors	PDCD6IP	HGNC	ENSG00000170248	59	0	0.00	18	2	10.00	-	-	-
PDE4DIP	0	genome.wustl.edu	37	1	145075854	145075854	+	Silent	SNP	G	G	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	145075854	145075854	G	C	SNP	PDE4DIP	ENST00000369348	human	ensembl	69_37n	-1	known	silent	c.9	p.G3	0.048	NULL	pfam_Spindle_assoc	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	11	0	0.00	28	23	45.10	-	-	-
PLCL1	0	genome.wustl.edu	37	2	198950898	198950898	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	2	198950898	198950898	T	A	SNP	PLCL1	ENST00000428675	human	ensembl	69_37n	+1	known	missense	c.2657	p.I886N	1.000	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,prints_Pinositol_PLipase_C,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCL1	HGNC	ENSG00000115896	51	0	0.00	17	6	26.09	-	-	-
PLEC	0	genome.wustl.edu	37	8	145006612	145006612	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	8	145006612	145006612	T	C	SNP	PLEC	ENST00000322810	human	ensembl	69_37n	-1	known	missense	c.2344	p.S782G	1.000	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	32	0	0.00	50	12	19.35	-	-	-
PRKRIR	0	genome.wustl.edu	37	11	76062798	76062798	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	11	76062798	76062798	G	A	SNP	PRKRIR	ENST00000260045	human	ensembl	69_37n	-1	known	nonsense	c.1396	p.R466*	0.988	superfamily_RNaseH-like_dom	pfam_Znf_C2CH,pfam_HATC,superfamily_RNaseH-like_dom,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	PRKRIR	HGNC	ENSG00000137492	37	0	0.00	8	7	46.67	-	-	-
PSMA7	0	genome.wustl.edu	37	20	60714888	60714888	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	20	60714888	60714888	C	T	SNP	PSMA7	ENST00000442551	human	ensembl	69_37n	-1	known	missense	c.74	p.R25K	1.000	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PSMA7	HGNC	ENSG00000101182	26	0	0.00	48	8	14.29	-	-	-
RAD51C	0	genome.wustl.edu	37	17	56801450	56801450	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	17	56801450	56801450	C	A	SNP	RAD51C	ENST00000337432	human	ensembl	69_37n	+1	known	missense	c.954	p.D318E	0.980	pfam_DNA_recomb/repair_Rad51_C,pirsf_DNA_recomb/repair_RecA-like	pfam_DNA_recomb/repair_Rad51_C,pfam_Circ_KaiC/RadA,superfamily_DNA_repair_Rad51/TF_NusA_a-hlx,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	RAD51C	HGNC	ENSG00000108384	89	0	0.00	46	15	24.59	-	-	-
RHOT1	0	genome.wustl.edu	37	17	30536424	30536424	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	17	30536424	30536424	G	C	SNP	RHOT1	ENST00000358365	human	ensembl	69_37n	+1	known	missense	c.1795	p.E599Q	1.000	pirsf_Small_GTPase_Miro	pfam_MIRO-like,pfam_EF_hand_assoc_2,pfam_EF_hand_assoc_1,pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_EF_hand_Ca-bd,pirsf_Small_GTPase_Miro,pfscan_EF_HAND_2,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOT1	HGNC	ENSG00000126858	91	0	0.00	36	6	14.29	-	-	-
RNU2-2	0	genome.wustl.edu	37	11	62609178	62609178	+	RNA	SNP	A	A	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	11	62609178	62609178	A	G	SNP	RNU2-2	ENST00000410396	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.932	-	-	-	no_errors	RNU2-2	HGNC	ENSG00000222328	23	0	0.00	21	6	22.22	-	-	-
SBNO1	0	genome.wustl.edu	37	12	123798175	123798175	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	12	123798175	123798175	A	T	SNP	SBNO1	ENST00000420886	human	ensembl	69_37n	-1	known	missense	c.3212	p.F1071Y	1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697	71	0	0.00	18	6	25.00	-	-	-
SEC24A	0	genome.wustl.edu	37	5	133997101	133997101	+	Silent	SNP	C	C	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	5	133997101	133997101	C	A	SNP	SEC24A	ENST00000398844	human	ensembl	69_37n	+1	known	silent	c.390	p.A130	0.004	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24A	HGNC	ENSG00000113615	90	0	0.00	50	31	38.27	-	-	-
SLC1A3	0	genome.wustl.edu	37	5	36608580	36608580	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	5	36608580	36608580	C	T	SNP	SLC1A3	ENST00000265113	human	ensembl	69_37n	+1	known	nonsense	c.55	p.Q19*	1.000	NULL	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A3	HGNC	ENSG00000079215	56	0	0.00	42	11	20.75	-	-	-
SNAPC1	0	genome.wustl.edu	37	14	62235358	62235358	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	14	62235358	62235358	C	T	SNP	SNAPC1	ENST00000216294	human	ensembl	69_37n	+1	known	missense	c.434	p.S145L	1.000	pfam_SNAPc_SNAP43	pfam_SNAPc_SNAP43	-	no_errors	SNAPC1	HGNC	ENSG00000023608	72	0	0.00	27	7	20.59	-	-	-
SORBS2	0	genome.wustl.edu	37	4	186545132	186545132	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	4	186545132	186545132	T	C	SNP	SORBS2	ENST00000284776	human	ensembl	69_37n	-1	known	missense	c.1439	p.Y480C	0.995	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556	43	0	0.00	32	9	21.95	-	-	-
SOS2	0	genome.wustl.edu	37	14	50605424	50605424	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	14	50605424	50605424	T	C	SNP	SOS2	ENST00000216373	human	ensembl	69_37n	-1	known	missense	c.2864	p.N955S	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS2	HGNC	ENSG00000100485	87	0	0.00	25	10	28.57	-	-	-
SPATA18	0	genome.wustl.edu	37	4	52951104	52951104	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	4	52951104	52951104	G	T	SNP	SPATA18	ENST00000295213	human	ensembl	69_37n	+1	known	missense	c.1502	p.S501I	0.611	NULL	NULL	-	no_errors	SPATA18	HGNC	ENSG00000163071	76	0	0.00	39	12	23.53	-	-	-
TAF4	0	genome.wustl.edu	37	20	60581738	60581738	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	20	60581738	60581738	G	A	SNP	TAF4	ENST00000252996	human	ensembl	69_37n	-1	known	missense	c.2051	p.P684L	0.494	smart_TAFH_NHR1,pfscan_TAFH_NHR1	pfam_TAF4,pfam_TAFH_NHR1,superfamily_Histone-fold,smart_TAFH_NHR1,pfscan_TAFH_NHR1	-	no_errors	TAF4	HGNC	ENSG00000130699	13	0	0.00	34	10	22.73	-	-	-
TBC1D2	0	genome.wustl.edu	37	9	101006299	101006299	+	Silent	SNP	G	G	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	9	101006299	101006299	G	C	SNP	TBC1D2	ENST00000375066	human	ensembl	69_37n	-1	known	silent	c.624	p.L208	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2	HGNC	ENSG00000095383	28	0	0.00	21	15	41.67	-	-	-
UBE4B	0	genome.wustl.edu	37	1	10163139	10163139	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	1	10163139	10163139	A	G	SNP	UBE4B	ENST00000343090	human	ensembl	69_37n	+1	known	missense	c.569	p.N190S	1.000	NULL	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4B	HGNC	ENSG00000130939	66	0	0.00	11	6	35.29	-	-	-
USP53	0	genome.wustl.edu	37	4	120213924	120213924	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	4	120213924	120213924	A	T	SNP	USP53	ENST00000274030	human	ensembl	69_37n	+1	known	missense	c.2780	p.K927M	1.000	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP53	HGNC	ENSG00000145390	54	0	0.00	19	6	24.00	-	-	-
YIF1B	0	genome.wustl.edu	37	19	38798137	38798137	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	19	38798137	38798137	G	T	SNP	YIF1B	ENST00000588002	human	ensembl	69_37n	-1	known	missense	c.506	p.A169D	1.000	NULL	pfam_Hrf1	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	YIF1B	HGNC	ENSG00000167645	37	0	0.00	36	4	10.00	-	-	-
ZNF518B	0	genome.wustl.edu	37	4	10446040	10446040	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	4	10446040	10446040	G	C	SNP	ZNF518B	ENST00000326756	human	ensembl	69_37n	-1	known	missense	c.1913	p.S638C	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF518B	HGNC	ENSG00000178163	76	0	0.00	26	12	31.58	-	-	-
ZNF555	0	genome.wustl.edu	37	19	2852854	2852854	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	19	2852854	2852854	C	G	SNP	ZNF555	ENST00000334241	human	ensembl	69_37n	+1	known	missense	c.791	p.A264G	0.992	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF555	HGNC	ENSG00000186300	63	0	0.00	28	10	26.32	-	-	-
ZNF619	0	genome.wustl.edu	37	3	40528692	40528692	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	3	40528692	40528692	C	T	SNP	ZNF619	ENST00000447116	human	ensembl	69_37n	+1	known	missense	c.811	p.P271S	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF619	HGNC	ENSG00000177873	48	0	0.00	11	6	35.29	-	-	-
ZNF658	0	genome.wustl.edu	37	9	40774928	40774928	+	Missense_Mutation	SNP	T	T	G			TCGA-D8-A1Y0-01A-11D-A14K-09	TCGA-D8-A1Y0-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	33ff7870-fa76-4e48-a223-a8e2441d8f53	95048722-2664-4839-9814-dfa4aeb66198	9	40774928	40774928	T	G	SNP	ZNF658	ENST00000377626	human	ensembl	69_37n	-1	known	missense	c.347	p.Q116P	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF658	HGNC	ENSG00000196409	69	0	0.00	18	4	18.18	-	-	-
