Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACAA1	0	genome.wustl.edu	37	3	38167948	38167948	+	RNA	SNP	C	C	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	3	38167948	38167948	C	G	SNP	ACAA1	ENST00000480865	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.027	-	-	-	no_errors	ACAA1	HGNC	ENSG00000060971	51	0	0.00	34	8	19.05	-	-	-
ALOX15	0	genome.wustl.edu	37	17	4541604	4541604	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	17	4541604	4541604	C	T	SNP	ALOX15	ENST00000545513	human	ensembl	69_37n	-1	known	missense	c.781	p.V261M	0.997	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_LipOase_LH2,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_LipOase_LH2,prints_LipOase_mml,prints_LipOase_C,pfscan_LipOase_LH2	-	no_errors	ALOX15	HGNC	ENSG00000161905	25	0	0.00	24	4	14.29	-	-	-
ANXA7	0	genome.wustl.edu	37	10	75139669	75139669	+	Missense_Mutation	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	10	75139669	75139669	G	A	SNP	ANXA7	ENST00000372919	human	ensembl	69_37n	-1	known	missense	c.1199	p.S400F	0.997	pfam_Annexin_repeat,superfamily_Annexin,smart_Annexin_repeat	pfam_Annexin_repeat,superfamily_Annexin,smart_Annexin_repeat,prints_Annexin,prints_AnnexinVII,prints_AnnexinIV	-	no_errors	ANXA7	HGNC	ENSG00000138279	33	0	0.00	24	4	14.29	-	-	-
ASIC3	0	genome.wustl.edu	37	7	150747611	150747611	+	Missense_Mutation	SNP	C	C	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	150747611	150747611	C	A	SNP	ASIC3	ENST00000297512	human	ensembl	69_37n	+1	known	missense	c.729	p.S243R	1.000	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	ASIC3	HGNC	ENSG00000213199	33	0	0.00	20	10	33.33	-	-	-
C12orf76	0	genome.wustl.edu	37	12	110486272	110486272	+	Missense_Mutation	SNP	T	T	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	12	110486272	110486272	T	C	SNP	C12orf76	ENST00000551185	human	ensembl	69_37n	-1	known	missense	c.29	p.Y10C	0.000	NULL	NULL	-	no_errors	C12orf76	HGNC	ENSG00000174456	8	0	0.00	5	6	54.55	-	-	-
C9orf131	0	genome.wustl.edu	37	9	35045133	35045133	+	Missense_Mutation	SNP	C	C	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	9	35045133	35045133	C	A	SNP	C9orf131	ENST00000312292	human	ensembl	69_37n	+1	known	missense	c.2507	p.P836H	0.000	NULL	NULL	-	no_errors	C9orf131	HGNC	ENSG00000174038	35	0	0.00	24	4	14.29	-	-	-
CADM2	0	genome.wustl.edu	37	3	86010693	86010693	+	Missense_Mutation	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	3	86010693	86010693	A	T	SNP	CADM2	ENST00000405615	human	ensembl	69_37n	+1	known	missense	c.845	p.E282V	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like	-	no_errors	CADM2	HGNC	ENSG00000175161	48	0	0.00	34	6	15.00	-	-	-
CCDC27	0	genome.wustl.edu	37	1	3670688	3670688	+	Missense_Mutation	SNP	C	C	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	3670688	3670688	C	A	SNP	CCDC27	ENST00000294600	human	ensembl	69_37n	+1	known	missense	c.325	p.P109T	0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC27	HGNC	ENSG00000162592	37	0	0.00	18	4	18.18	-	-	-
CEP57L1	0	genome.wustl.edu	37	6	109471414	109471414	+	Missense_Mutation	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	6	109471414	109471414	G	A	SNP	CEP57L1	ENST00000359793	human	ensembl	69_37n	+1	known	missense	c.434	p.R145Q	0.971	pfam_Cep57_MT-bd_dom	pfam_Cep57_MT-bd_dom	-	no_errors	CEP57L1	HGNC	ENSG00000183137	27	0	0.00	20	5	20.00	-	-	-
CFI	0	genome.wustl.edu	37	4	110685842	110685842	+	Missense_Mutation	SNP	C	C	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	4	110685842	110685842	C	G	SNP	CFI	ENST00000394634	human	ensembl	69_37n	-1	known	missense	c.333	p.K111N	0.159	superfamily_Srcr_rcpt-rel	pfam_Peptidase_S1_S6,pfam_LDrepeatLR_classA_rpt,pfam_Srcr_rcpt,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_FacI_MAC,smart_Srcr_rcpt-rel,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1_S6,pfscan_LDrepeatLR_classA_rpt,pfscan_Srcr_rcpt,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	CFI	HGNC	ENSG00000205403	26	0	0.00	29	4	12.12	-	-	-
CHD2	0	genome.wustl.edu	37	15	93567820	93567820	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	15	93567820	93567820	C	T	SNP	CHD2	ENST00000394196	human	ensembl	69_37n	+1	novel	missense	c.5372	p.P1791L	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575	47	0	0.00	40	6	13.04	-	-	-
CHRNA1	0	genome.wustl.edu	37	2	175618413	175618413	+	Missense_Mutation	SNP	T	T	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	2	175618413	175618413	T	A	SNP	CHRNA1	ENST00000261007	human	ensembl	69_37n	-1	known	missense	c.671	p.K224M	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNA1	HGNC	ENSG00000138435	25	0	0.00	13	6	31.58	-	-	-
CLCNKA	0	genome.wustl.edu	37	1	16360382	16360382	+	RNA	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	16360382	16360382	G	T	SNP	CLCNKA	ENST00000464764	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CLCNKA	HGNC	ENSG00000186510	58	0	0.00	24	4	14.29	-	-	-
DHX15	0	genome.wustl.edu	37	4	24541821	24541821	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	4	24541821	24541821	G	T	SNP	DHX15	ENST00000336812	human	ensembl	69_37n	-1	known	missense	c.1696	p.P566T	1.000	pfam_Helicase-assoc_dom,smart_Helicase-assoc_dom	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606	27	0	0.00	25	4	13.79	-	-	-
DIP2C	0	genome.wustl.edu	37	10	486824	486824	+	Silent	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	10	486824	486824	G	T	SNP	DIP2C	ENST00000280886	human	ensembl	69_37n	-1	known	silent	c.381	p.A127	1.000	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2C	HGNC	ENSG00000151240	26	0	0.00	23	7	23.33	-	-	-
DISC1	0	genome.wustl.edu	37	1	232144818	232144818	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	232144818	232144818	C	T	SNP	DISC1	ENST00000422590	human	ensembl	69_37n	+1	known	missense	c.538	p.P180S	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	DISC1	HGNC	ENSG00000162946	24	0	0.00	17	6	26.09	-	-	-
DLGAP4	0	genome.wustl.edu	37	20	35128637	35128637	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	20	35128637	35128637	G	C	SNP	DLGAP4	ENST00000339266	human	ensembl	69_37n	+1	known	missense	c.2135	p.R712P	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP4	HGNC	ENSG00000080845	26	0	0.00	25	7	21.88	-	-	-
DLGAP4	0	genome.wustl.edu	37	20	35128638	35128638	+	Silent	SNP	G	G	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	20	35128638	35128638	G	C	SNP	DLGAP4	ENST00000339266	human	ensembl	69_37n	+1	known	silent	c.2136	p.R712	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP4	HGNC	ENSG00000080845	26	0	0.00	23	8	25.81	-	-	-
DYRK4	0	genome.wustl.edu	37	12	4705773	4705773	+	Silent	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	12	4705773	4705773	G	A	SNP	DYRK4	ENST00000010132	human	ensembl	69_37n	+1	known	silent	c.438	p.L146	0.998	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	DYRK4	HGNC	ENSG00000010219	48	0	0.00	38	9	19.15	-	-	-
EVC2	0	genome.wustl.edu	37	4	5642369	5642369	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	4	5642369	5642369	C	T	SNP	EVC2	ENST00000344408	human	ensembl	69_37n	-1	known	missense	c.1342	p.D448N	0.837	pfam_EVC2-like	pfam_EVC2-like	-	no_errors	EVC2	HGNC	ENSG00000173040	68	0	0.00	49	7	12.50	-	-	-
FAM107B	0	genome.wustl.edu	37	10	14563237	14563237	+	Silent	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	10	14563237	14563237	G	A	SNP	FAM107B	ENST00000181796	human	ensembl	69_37n	-1	known	silent	c.873	p.G291	1.000	pfam_DUF1151	pfam_DUF1151	-	no_errors	FAM107B	HGNC	ENSG00000065809	60	0	0.00	42	12	22.22	-	-	-
FAM75E1	0	genome.wustl.edu	37	9	90497818	90497818	+	Silent	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	9	90497818	90497818	C	T	SNP	FAM75E1	ENST00000325643	human	ensembl	69_37n	+1	known	silent	c.12	p.L4	0.176	NULL	NULL	-	no_errors	FAM75E1	HGNC	ENSG00000177992	40	0	0.00	25	4	13.79	-	-	-
FAT4	0	genome.wustl.edu	37	4	126411541	126411541	+	Missense_Mutation	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	4	126411541	126411541	A	T	SNP	FAT4	ENST00000394329	human	ensembl	69_37n	+1	known	missense	c.13564	p.S4522C	0.941	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	55	0	0.00	36	5	12.20	-	-	-
FBXO18	0	genome.wustl.edu	37	10	5945078	5945081	+	Frame_Shift_Del	DEL	ACAA	ACAA	-			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	ACAA	ACAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	10	5945078	5945081	ACAA	-	DEL	FBXO18	ENST00000379999	human	ensembl	69_37n	+1	known	frame_shift_del	c.250_253	p.N85fs	1.000:1.000:0.999:1.000	NULL	pfam_UvrD-like_ATP-bd,pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO18	HGNC	ENSG00000134452	51	0	0.00	57	9	13.64	-	-	-
FN3K	0	genome.wustl.edu	37	17	80708422	80708422	+	Missense_Mutation	SNP	C	C	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	17	80708422	80708422	C	G	SNP	FN3K	ENST00000300784	human	ensembl	69_37n	+1	known	missense	c.721	p.H241D	1.000	pfam_Fructo-/Ketosamine-3-kinase,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,pirsf_Fructo-/Ketosamine-3-kinase	pfam_Fructo-/Ketosamine-3-kinase,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,pirsf_Fructo-/Ketosamine-3-kinase	-	no_errors	FN3K	HGNC	ENSG00000167363	40	0	0.00	37	5	11.90	-	-	-
GABBR1	0	genome.wustl.edu	37	6	29599375	29599375	+	Silent	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	6	29599375	29599375	A	T	SNP	GABBR1	ENST00000377034	human	ensembl	69_37n	-1	known	silent	c.87	p.G29	1.000	superfamily_Complement_control_module	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681	56	0	0.00	38	8	17.02	-	-	-
GATA5	0	genome.wustl.edu	37	20	61048600	61048600	+	Silent	SNP	A	A	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	20	61048600	61048600	A	G	SNP	GATA5	ENST00000252997	human	ensembl	69_37n	-1	known	silent	c.558	p.G186	0.066	smart_Znf_GATA,pirsf_TF_GATA_4/5/6,pfscan_Znf_GATA,prints_Znf_GATA	pfam_GATA_N,pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA_4/5/6,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA5	HGNC	ENSG00000130700	55	0	0.00	46	8	14.55	-	-	-
GPR149	0	genome.wustl.edu	37	3	154146676	154146676	+	Silent	SNP	A	A	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	3	154146676	154146676	A	G	SNP	GPR149	ENST00000389740	human	ensembl	69_37n	-1	known	silent	c.729	p.P243	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	GPR149	HGNC	ENSG00000174948	43	0	0.00	26	7	21.21	-	-	-
GPR31	0	genome.wustl.edu	37	6	167570781	167570781	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	6	167570781	167570781	G	C	SNP	GPR31	ENST00000366834	human	ensembl	69_37n	-1	known	missense	c.539	p.A180G	0.002	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	GPR31	HGNC	ENSG00000120436	36	0	0.00	21	7	25.00	-	-	-
HAUS7	0	genome.wustl.edu	37	X	152721081	152721081	+	Missense_Mutation	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	X	152721081	152721081	G	A	SNP	HAUS7	ENST00000421080	human	ensembl	69_37n	-1	known	missense	c.344	p.A115V	0.873	NULL	NULL	-	no_errors	HAUS7	HGNC	ENSG00000213397	45	0	0.00	30	4	11.76	-	-	-
HNRNPH2	0	genome.wustl.edu	37	X	100667605	100667605	+	Missense_Mutation	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	X	100667605	100667605	A	T	SNP	HNRNPH2	ENST00000316594	human	ensembl	69_37n	+1	known	missense	c.629	p.Y210F	1.000	NULL	pfam_RRM_dom,pfam_Znf_CHHC,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPH2	HGNC	ENSG00000126945	47	0	0.00	30	5	14.29	-	-	-
HTR3B	0	genome.wustl.edu	37	11	113815302	113815302	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	11	113815302	113815302	C	T	SNP	HTR3B	ENST00000543092	human	ensembl	69_37n	+1	putative	missense	c.490	p.L164F	1.000	NULL	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_5HT3_rcpt_A,prints_Neur_channel	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	HTR3B	HGNC	ENSG00000149305	31	0	0.00	23	14	37.84	-	-	-
ICA1	0	genome.wustl.edu	37	7	8196529	8196529	+	Missense_Mutation	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	8196529	8196529	A	T	SNP	ICA1	ENST00000407906	human	ensembl	69_37n	-1	putative	missense	c.1021	p.Y341N	0.003	NULL	pfam_Arfaptin_homology_dom,pfscan_Arfaptin_homology_dom	-	no_errors	ICA1	HGNC	ENSG00000003147	39	0	0.00	33	4	10.81	-	-	-
INTS1	0	genome.wustl.edu	37	7	1522191	1522191	+	Missense_Mutation	SNP	C	C	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	1522191	1522191	C	G	SNP	INTS1	ENST00000389470	human	ensembl	69_37n	-1	known	missense	c.4180	p.V1394L	1.000	NULL	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880	36	0	0.00	31	4	11.43	-	-	-
INTS3	0	genome.wustl.edu	37	1	153746474	153746474	+	RNA	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	153746474	153746474	G	T	SNP	INTS3	ENST00000476843	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	INTS3	HGNC	ENSG00000143624	24	0	0.00	17	6	26.09	-	-	-
IQGAP3	0	genome.wustl.edu	37	1	156533415	156533415	+	Silent	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	156533415	156533415	G	A	SNP	IQGAP3	ENST00000361170	human	ensembl	69_37n	-1	known	silent	c.549	p.G183	1.000	superfamily_CH-domain	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_RasGAP	-	no_errors	IQGAP3	HGNC	ENSG00000183856	29	0	0.00	35	7	16.67	-	-	-
KAT8	0	genome.wustl.edu	37	16	31142572	31142572	+	Missense_Mutation	SNP	A	A	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	16	31142572	31142572	A	G	SNP	KAT8	ENST00000219797	human	ensembl	69_37n	+1	known	missense	c.1369	p.K457E	1.000	NULL	pfam_MOZ_SAS,pfam_Tudor-knot,superfamily_Acyl_CoA_acyltransferase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow	-	no_errors	KAT8	HGNC	ENSG00000103510	42	0	0.00	15	5	25.00	-	-	-
KIDINS220	0	genome.wustl.edu	37	2	8888079	8888079	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	2	8888079	8888079	G	A	SNP	KIDINS220	ENST00000256707	human	ensembl	69_37n	-1	known	nonsense	c.3466	p.Q1156*	1.000	NULL	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313	74	0	0.00	44	9	16.98	-	-	-
LINC00281	0	genome.wustl.edu	37	22	21663672	21663672	+	RNA	SNP	T	T	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	22	21663672	21663672	T	C	SNP	LINC00281	ENST00000436681	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.827	-	-	-	no_errors	LINC00281	HGNC	ENSG00000206142	38	0	0.00	19	3	13.64	-	-	-
LRCH1	0	genome.wustl.edu	37	13	47243213	47243213	+	Silent	SNP	C	C	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	13	47243213	47243213	C	G	SNP	LRCH1	ENST00000389798	human	ensembl	69_37n	+1	known	silent	c.501	p.L167	1.000	NULL	pfam_Leu-rich_rpt,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH1	HGNC	ENSG00000136141	28	0	0.00	30	6	16.22	-	-	-
LRP12	0	genome.wustl.edu	37	8	105511557	105511557	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	8	105511557	105511557	C	T	SNP	LRP12	ENST00000424843	human	ensembl	69_37n	-1	known	missense	c.406	p.A136T	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_LDrepeatLR_classA_rpt,superfamily_CUB,superfamily_LDrepeatLR_classA_rpt,smart_CUB,smart_LDrepeatLR_classA_rpt,pfscan_CUB,pfscan_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	35	0	0.00	24	4	13.79	-	-	-
LRRC72	0	genome.wustl.edu	37	7	16606002	16606002	+	Silent	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	16606002	16606002	A	T	SNP	LRRC72	ENST00000401542	human	ensembl	69_37n	+1	novel	silent	c.492	p.P164	0.450	NULL	NULL	-	no_errors	LRRC72	HGNC	ENSG00000205858	19	0	0.00	11	3	21.43	-	-	-
LUC7L	0	genome.wustl.edu	37	16	278856	278856	+	RNA	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	16	278856	278856	G	A	SNP	LUC7L	ENST00000494366	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.023	-	-	-	no_errors	LUC7L	HGNC	ENSG00000007392	26	0	0.00	15	3	15.79	-	-	-
MITF	0	genome.wustl.edu	37	3	69987024	69987024	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	3	69987024	69987024	C	T	SNP	MITF	ENST00000448226	human	ensembl	69_37n	+1	known	missense	c.406	p.R136W	1.000	NULL	pfam_bHLH_ZIP_TF_MiT/TFE,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	MITF	HGNC	ENSG00000187098	33	0	0.00	14	7	33.33	-	-	-
MKKS	0	genome.wustl.edu	37	20	10385993	10385993	+	Missense_Mutation	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	20	10385993	10385993	A	T	SNP	MKKS	ENST00000347364	human	ensembl	69_37n	-1	known	missense	c.1615	p.L539M	0.190	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1	-	no_errors	MKKS	HGNC	ENSG00000125863	28	0	0.00	26	4	13.33	-	-	-
MUC4	0	genome.wustl.edu	37	3	195509322	195509322	+	Silent	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	3	195509322	195509322	G	A	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	silent	c.9129	p.V3043	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	36	0	0.00	22	9	29.03	-	-	-
NBPF9	0	genome.wustl.edu	37	1	144822695	144822695	+	RNA	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	144822695	144822695	A	T	SNP	NBPF9	ENST00000473761	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NBPF9	HGNC	ENSG00000168614	8	0	0.00	9	10	52.63	-	-	-
NLRP7	0	genome.wustl.edu	37	19	55449554	55449554	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	19	55449554	55449554	G	C	SNP	NLRP7	ENST00000446217	human	ensembl	69_37n	-1	known	missense	c.2071	p.L691V	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634	54	0	0.00	37	5	11.90	-	-	-
NPL	0	genome.wustl.edu	37	1	182775362	182775362	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	182775362	182775362	G	C	SNP	NPL	ENST00000258317	human	ensembl	69_37n	+1	known	missense	c.225	p.K75N	0.989	pfam_Dihydrodipicolinate_synth-like	pfam_Dihydrodipicolinate_synth-like,prints_Dihydrodipicolinate_synth-like	-	no_errors	NPL	HGNC	ENSG00000135838	44	0	0.00	38	5	11.63	-	-	-
OR1L4	0	genome.wustl.edu	37	9	125486411	125486411	+	Missense_Mutation	SNP	T	T	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	9	125486411	125486411	T	C	SNP	OR1L4	ENST00000259466	human	ensembl	69_37n	+1	known	missense	c.143	p.L48P	0.997	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR1L4	HGNC	ENSG00000136939	61	0	0.00	29	4	12.12	-	-	-
OR4S2	0	genome.wustl.edu	37	11	55418888	55418888	+	Missense_Mutation	SNP	A	A	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	11	55418888	55418888	A	G	SNP	OR4S2	ENST00000312422	human	ensembl	69_37n	+1	known	missense	c.509	p.N170S	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	23	0	0.00	18	5	21.74	-	-	-
OTOA	0	genome.wustl.edu	37	16	21742185	21742185	+	Silent	SNP	C	C	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	16	21742185	21742185	C	G	SNP	OTOA	ENST00000286149	human	ensembl	69_37n	+1	known	silent	c.2277	p.T759	0.000	NULL	NULL	-	no_errors	OTOA	HGNC	ENSG00000155719	44	0	0.00	23	5	17.86	-	-	-
PIK3C2B	0	genome.wustl.edu	37	1	204423860	204423860	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	204423860	204423860	G	C	SNP	PIK3C2B	ENST00000367187	human	ensembl	69_37n	-1	known	missense	c.2003	p.P668R	1.000	pfam_PI3K_C2_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_Ca-dep,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2B	HGNC	ENSG00000133056	14	0	0.00	18	4	18.18	-	-	-
PILRB	0	genome.wustl.edu	37	7	99954396	99954396	+	Missense_Mutation	SNP	C	C	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	99954396	99954396	C	A	SNP	PILRB	ENST00000448382	human	ensembl	69_37n	+1	known	missense	c.173	p.T58N	0.001	NULL	NULL	-	no_errors	PILRB	HGNC	ENSG00000121716	27	0	0.00	24	7	22.58	-	-	-
PKD1L1	0	genome.wustl.edu	37	7	47944109	47944109	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	47944109	47944109	G	-	DEL	PKD1L1	ENST00000289672	human	ensembl	69_37n	-1	known	frame_shift_del	c.1797	p.S600fs	0.000	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_LipOase_LH2,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_LipOase_LH2,pfscan_PKD_dom,pfscan_LipOase_LH2,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	23	0	0.00	9	3	25.00	-	-	-
PKD1L2	0	genome.wustl.edu	37	16	81208203	81208203	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	16	81208203	81208203	G	T	SNP	PKD1L2	ENST00000527937	human	ensembl	69_37n	-1	known	missense	c.668	p.P223H	0.001	pfscan_REJ-like	superfamily_Coatomer/clathrin_app_Ig-like,pfscan_REJ-like	-	no_errors	PKD1L2	HGNC	ENSG00000166473	28	0	0.00	36	4	10.00	-	-	-
PPP1R3F	0	genome.wustl.edu	37	X	49142944	49142944	+	Missense_Mutation	SNP	T	T	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	X	49142944	49142944	T	G	SNP	PPP1R3F	ENST00000055335	human	ensembl	69_37n	+1	known	missense	c.1792	p.S598A	0.997	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3F	HGNC	ENSG00000049769	21	0	0.00	27	6	18.18	-	-	-
PRRC2A	0	genome.wustl.edu	37	6	31605345	31605345	+	Silent	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	6	31605345	31605345	G	T	SNP	PRRC2A	ENST00000376007	human	ensembl	69_37n	+1	known	silent	c.6456	p.G2152	0.975	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469	25	0	0.00	23	5	17.86	-	-	-
PSPH	0	genome.wustl.edu	37	7	56088780	56088780	+	Silent	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	56088780	56088780	G	A	SNP	PSPH	ENST00000275605	human	ensembl	69_37n	-1	known	silent	c.126	p.D42	0.854	pfam_Dehalogen-like_hydro,pfam_Pase_PHOSPHO-typ,superfamily_HAD-like_dom,tigrfam_SerB,tigrfam_HAD-SF_hydro_IB_PSP-like	pfam_Dehalogen-like_hydro,pfam_Pyrimidine_nucleotidase_eu,pfam_Pase_PHOSPHO-typ,superfamily_HAD-like_dom,tigrfam_SerB,tigrfam_HAD-SF_hydro_IB_PSP-like	-	no_errors	PSPH	HGNC	ENSG00000146733	26	0	0.00	27	8	22.86	-	-	-
PTPRQ	0	genome.wustl.edu	37	12	81062884	81062884	+	Missense_Mutation	SNP	A	A	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	12	81062884	81062884	A	G	SNP	PTPRQ	ENST00000532722	human	ensembl	69_37n	+1	novel	missense	c.5381	p.H1794R	0.998	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PTPRQ	HGNC	ENSG00000139304	65	0	0.00	37	9	19.57	-	-	-
RBM15B	0	genome.wustl.edu	37	3	51430822	51430824	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	3	51430822	51430824	CCA	-	DEL	RBM15B	ENST00000323686	human	ensembl	69_37n	+1	novel	in_frame_del	c.1992_1994	p.H668in_frame_del	1.000:1.000:0.998	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	RBM15B	HGNC	ENSG00000179837	16	0	0.00	3	2	40.00	-	-	-
RBM48	0	genome.wustl.edu	37	7	92163949	92163949	+	Missense_Mutation	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	92163949	92163949	G	A	SNP	RBM48	ENST00000265732	human	ensembl	69_37n	+1	known	missense	c.682	p.G228S	0.002	NULL	NULL	-	no_errors	RBM48	HGNC	ENSG00000127993	27	0	0.00	35	4	10.26	-	-	-
RBM6	0	genome.wustl.edu	37	3	50005866	50005866	+	Silent	SNP	T	T	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	3	50005866	50005866	T	C	SNP	RBM6	ENST00000266022	human	ensembl	69_37n	+1	known	silent	c.1008	p.H336	1.000	NULL	pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM6	HGNC	ENSG00000004534	21	0	0.00	19	6	24.00	-	-	-
REPIN1	0	genome.wustl.edu	37	7	150069827	150069827	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	150069827	150069827	G	T	SNP	REPIN1	ENST00000489432	human	ensembl	69_37n	+1	known	missense	c.1668	p.K556N	0.921	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	REPIN1	HGNC	ENSG00000214022	22	0	0.00	12	4	25.00	-	-	-
RNASE9	0	genome.wustl.edu	37	14	21026773	21026773	+	Splice_Site	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	14	21026773	21026773	C	T	SNP	RNASE9	ENST00000553706	human	ensembl	69_37n	-1	putative	splice_site	c.1+1	e1+1	0.000	-	-	-	no_errors	RNASE9	HGNC	ENSG00000188655	35	0	0.00	22	5	18.52	-	-	-
SGMS1	0	genome.wustl.edu	37	10	52103399	52103399	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	10	52103399	52103399	C	T	SNP	SGMS1	ENST00000361781	human	ensembl	69_37n	-1	known	missense	c.476	p.R159Q	1.000	NULL	pfam_P_Acid_Pase_2/haloperoxidase,pfam_SAM_type1,superfamily_SAM/pointed,superfamily_P_Acid_Pase_2/haloperoxidase,pfscan_SAM	-	no_errors	SGMS1	HGNC	ENSG00000198964	36	0	0.00	22	4	15.38	-	-	-
SLC25A12	0	genome.wustl.edu	37	2	172644449	172644449	+	Missense_Mutation	SNP	C	C	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	2	172644449	172644449	C	G	SNP	SLC25A12	ENST00000422440	human	ensembl	69_37n	-1	known	missense	c.1594	p.A532P	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A12	HGNC	ENSG00000115840	34	0	0.00	23	6	20.69	-	-	-
SLC2A7	0	genome.wustl.edu	37	1	9074793	9074793	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	9074793	9074793	G	T	SNP	SLC2A7	ENST00000400906	human	ensembl	69_37n	-1	known	missense	c.850	p.L284I	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A7	HGNC	ENSG00000197241	34	0	0.00	32	6	15.79	-	-	-
SPTA1	0	genome.wustl.edu	37	1	158650472	158650472	+	Silent	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	158650472	158650472	G	A	SNP	SPTA1	ENST00000368148	human	ensembl	69_37n	-1	known	silent	c.579	p.T193	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_HAND_2,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	37	0	0.00	48	11	18.64	-	-	-
TAS2R39	0	genome.wustl.edu	37	7	142881277	142881277	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	7	142881277	142881277	G	C	SNP	TAS2R39	ENST00000446620	human	ensembl	69_37n	+1	known	missense	c.766	p.A256P	1.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R39	HGNC	ENSG00000236398	34	0	0.00	39	5	11.36	-	-	-
TBKBP1	0	genome.wustl.edu	37	17	45776851	45776851	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	17	45776851	45776851	C	T	SNP	TBKBP1	ENST00000361722	human	ensembl	69_37n	+1	known	missense	c.800	p.T267I	0.993	NULL	NULL	-	no_errors	TBKBP1	HGNC	ENSG00000198933	31	0	0.00	34	4	10.53	-	-	-
TCTN1	0	genome.wustl.edu	37	12	111085062	111085062	+	Missense_Mutation	SNP	C	C	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	12	111085062	111085062	C	A	SNP	TCTN1	ENST00000397659	human	ensembl	69_37n	+1	known	missense	c.1556	p.T519N	1.000	NULL	pfam_DUF1619	-	no_errors	TCTN1	HGNC	ENSG00000204852	26	0	0.00	21	7	25.00	-	-	-
TNFRSF13B	0	genome.wustl.edu	37	17	16852070	16852070	+	Missense_Mutation	SNP	C	C	G			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	17	16852070	16852070	C	G	SNP	TNFRSF13B	ENST00000261652	human	ensembl	69_37n	-1	known	missense	c.427	p.G143R	0.962	NULL	pfam_TACI_Cys-rich-dom,prints_TNFR_13B	-	no_errors	TNFRSF13B	HGNC	ENSG00000240505	34	0	0.00	23	15	39.47	-	-	-
TRAV9-1	0	genome.wustl.edu	37	14	22280051	22280051	+	Silent	SNP	T	T	C			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	14	22280051	22280051	T	C	SNP	TRAV9-1	ENST00000390431	human	ensembl	69_37n	+1	known	silent	c.240	p.G80	0.998	pfam_Ig_V-set,pfscan_Ig-like	pfam_Ig_V-set,pfscan_Ig-like	-	no_stop_codon:bad_bp_length_for_coding_region	TRAV9-1	HGNC	ENSG00000211783	33	0	0.00	23	5	17.86	-	-	-
TRIM2	0	genome.wustl.edu	37	4	154178844	154178844	+	RNA	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	4	154178844	154178844	G	A	SNP	TRIM2	ENST00000502281	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	TRIM2	HGNC	ENSG00000109654	32	0	0.00	22	6	21.43	-	-	-
TTC40	0	genome.wustl.edu	37	10	134755513	134755513	+	Missense_Mutation	SNP	A	A	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	10	134755513	134755513	A	T	SNP	TTC40	ENST00000368582	human	ensembl	69_37n	-1	known	missense	c.145	p.F49I	0.940	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	55	0	0.00	33	5	13.16	-	-	-
VWA5A	0	genome.wustl.edu	37	11	123993833	123993833	+	Silent	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	11	123993833	123993833	C	T	SNP	VWA5A	ENST00000392748	human	ensembl	69_37n	+1	known	silent	c.927	p.A309	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5A	HGNC	ENSG00000110002	28	0	0.00	21	7	25.00	-	-	-
WDR63	0	genome.wustl.edu	37	1	85564233	85564233	+	Silent	SNP	G	G	A			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	1	85564233	85564233	G	A	SNP	WDR63	ENST00000294664	human	ensembl	69_37n	+1	known	silent	c.1371	p.P457	0.794	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR63	HGNC	ENSG00000162643	42	0	0.00	35	5	12.50	-	-	-
WDR72	0	genome.wustl.edu	37	15	54008807	54008807	+	Silent	SNP	G	G	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	15	54008807	54008807	G	T	SNP	WDR72	ENST00000360509	human	ensembl	69_37n	-1	known	silent	c.336	p.I112	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415	27	0	0.00	12	3	20.00	-	-	-
XIST	0	genome.wustl.edu	37	X	73071058	73071058	+	RNA	SNP	C	C	T			TCGA-LL-A441-01A-11D-A243-09	TCGA-LL-A441-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a4deb919-227b-42f0-8e50-b2963c13c4fc	20d61f40-5bee-48f5-8981-127982a0995c	X	73071058	73071058	C	T	SNP	XIST	ENST00000429829	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.844	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	33	0	0.00	20	13	38.24	-	-	-
