Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ALG1	0	genome.wustl.edu	37	16	5132586	5132586	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	16	5132586	5132586	C	T	SNP	ALG1	ENST00000262374	human	ensembl	69_37n	+1	known	missense	c.1099	p.H367Y	1.000	pfam_Glyco_trans_1	pfam_Glyco_trans_1	-	no_errors	ALG1	HGNC	ENSG00000033011	138	0	0.00	170	36	17.48	-	-	-
AMZ2	0	genome.wustl.edu	37	17	66246548	66246548	+	Missense_Mutation	SNP	T	T	G			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	17	66246548	66246548	T	G	SNP	AMZ2	ENST00000359904	human	ensembl	69_37n	+1	known	missense	c.220	p.F74V	1.000	NULL	pfam_Pept_M54_archaemetzincn	-	no_errors	AMZ2	HGNC	ENSG00000196704	96	0	0.00	96	90	48.13	-	-	-
ASCL3	0	genome.wustl.edu	37	11	8959533	8959533	+	Missense_Mutation	SNP	G	G	C			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	11	8959533	8959533	G	C	SNP	ASCL3	ENST00000325884	human	ensembl	69_37n	-1	known	missense	c.176	p.P59R	0.167	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	ASCL3	HGNC	ENSG00000176009	129	1	0.76	80	24	23.08	-	-	-
CHML	0	genome.wustl.edu	37	1	241798828	241798828	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	1	241798828	241798828	G	-	DEL	CHML	ENST00000366553	human	ensembl	69_37n	-1	known	frame_shift_del	c.241	p.H81fs	0.004	pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort,prints_GDP_dissociation_inhibitor	-	no_errors	CHML	HGNC	ENSG00000203668	92	0	0.00	124	71	36.04	-	-	-
CILP	0	genome.wustl.edu	37	15	65489601	65489601	+	Missense_Mutation	SNP	A	A	T			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	15	65489601	65489601	A	T	SNP	CILP	ENST00000261883	human	ensembl	69_37n	-1	known	missense	c.3023	p.F1008Y	1.000	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	CILP	HGNC	ENSG00000138615	54	0	0.00	39	12	23.53	-	-	-
COL20A1	0	genome.wustl.edu	37	20	61939981	61939981	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	20	61939981	61939981	C	T	SNP	COL20A1	ENST00000326996	human	ensembl	69_37n	+1	known	missense	c.863	p.T288M	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL20A1	HGNC	ENSG00000101203	20	0	0.00	121	23	15.97	-	-	-
ENSG00000235041	0	genome.wustl.edu	37	9	99673410	99673410	+	Splice_Site	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	9	99673410	99673410	G	A	SNP	ENSG00000235041	ENST00000435150	human	ensembl	69_37n	+1	known	splice_site	c.NULL	NULL	0.999	-	-	-	no_coding_region:pseudogene	RP11-330M2.4	Clone_based_vega_gene	ENSG00000235041	9	0	0.00	7	7	50.00	-	-	-
FAF2	0	genome.wustl.edu	37	5	175875463	175875463	+	Missense_Mutation	SNP	C	C	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	5	175875463	175875463	C	A	SNP	FAF2	ENST00000261942	human	ensembl	69_37n	+1	known	missense	c.55	p.Q19K	1.000	superfamily_UBA-like	pfam_UBX,superfamily_UBA-like,smart_UAS,pfscan_UBX	-	no_errors	FAF2	HGNC	ENSG00000113194	45	0	0.00	47	23	32.86	-	-	-
FAM115C	0	genome.wustl.edu	37	7	143417083	143417083	+	Missense_Mutation	SNP	T	T	C			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	7	143417083	143417083	T	C	SNP	FAM115C	ENST00000441159	human	ensembl	69_37n	+1	known	missense	c.931	p.C311R	0.002	NULL	NULL	-	no_errors	FAM115C	HGNC	ENSG00000170379	11	0	0.00	4	9	69.23	-	-	-
GJB2	0	genome.wustl.edu	37	13	20763283	20763283	+	Missense_Mutation	SNP	G	G	C			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	13	20763283	20763283	G	C	SNP	GJB2	ENST00000382844	human	ensembl	69_37n	-1	known	missense	c.438	p.F146L	0.647	pfam_Connexin_CCC,prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin26	-	no_errors	GJB2	HGNC	ENSG00000165474	88	0	0.00	75	20	21.05	-	-	-
GNPTAB	0	genome.wustl.edu	37	12	102161847	102161847	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	12	102161847	102161847	G	A	SNP	GNPTAB	ENST00000299314	human	ensembl	69_37n	-1	known	missense	c.1376	p.S459L	0.999	pfam_Notch_dom,superfamily_Notch_dom,smart_Notch_dom,pfscan_Notch_dom	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_HAND_2,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	66	0	0.00	61	28	31.46	-	-	-
GRIN2C	0	genome.wustl.edu	37	17	72846850	72846850	+	Silent	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	17	72846850	72846850	G	A	SNP	GRIN2C	ENST00000293190	human	ensembl	69_37n	-1	known	silent	c.1170	p.Y390	1.000	NULL	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,pfam_NMDAR2_C,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2C	HGNC	ENSG00000161509	20	0	0.00	23	9	28.12	-	-	-
HNRPDL	0	genome.wustl.edu	37	4	83350497	83350497	+	Missense_Mutation	SNP	C	C	G			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	4	83350497	83350497	C	G	SNP	HNRPDL	ENST00000295470	human	ensembl	69_37n	-1	known	missense	c.347	p.S116T	0.255	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRPDL	HGNC	ENSG00000152795	14	0	0.00	48	27	36.00	-	-	-
IKZF1	0	genome.wustl.edu	37	7	50468114	50468114	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	7	50468114	50468114	G	A	SNP	IKZF1	ENST00000331340	human	ensembl	69_37n	+1	known	missense	c.1349	p.R450H	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF1	HGNC	ENSG00000185811	30	0	0.00	19	6	24.00	-	-	-
LRRD1	0	genome.wustl.edu	37	7	91792659	91792659	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	7	91792659	91792659	C	A	SNP	LRRD1	ENST00000430130	human	ensembl	69_37n	-1	known	nonsense	c.1858	p.E620*	0.996	NULL	pfam_Leu-rich_rpt,superfamily_DEATH-like,smart_Leu-rich_rpt_typical-subtyp,pfscan_Death	-	no_errors	LRRD1	HGNC	ENSG00000240720	174	0	0.00	180	36	16.67	-	-	-
MCTS1	0	genome.wustl.edu	37	X	119738713	119738713	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	X	119738713	119738713	G	A	SNP	MCTS1	ENST00000371315	human	ensembl	69_37n	+1	known	missense	c.5	p.G2D	0.999	NULL	pfam_PUA,superfamily_PUA-like_domain,smart_PUA,pirsf_Transl_RNA-bd_prd,pfscan_PUA,tigrfam_Uncharacterised_CHP00451	-	no_errors	MCTS1	HGNC	ENSG00000232119	243	1	0.41	237	52	17.87	-	-	-
NFATC4	0	genome.wustl.edu	37	14	24845882	24845882	+	Silent	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	14	24845882	24845882	G	A	SNP	NFATC4	ENST00000413692	human	ensembl	69_37n	+1	known	silent	c.2628	p.P876	0.948	NULL	pfam_RHD,pfam_IPT_TIG_rcpt,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT_TIG_rcpt,pfscan_RHD,prints_NFAT	-	no_errors	NFATC4	HGNC	ENSG00000100968	29	0	0.00	61	12	16.44	-	-	-
NLRC5	0	genome.wustl.edu	37	16	57059665	57059665	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	16	57059665	57059665	C	T	SNP	NLRC5	ENST00000538805	human	ensembl	69_37n	+1	putative	missense	c.67	p.P23S	0.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	NLRC5	HGNC	ENSG00000140853	80	0	0.00	81	40	33.06	-	-	-
NOTUM	0	genome.wustl.edu	37	17	79914949	79914949	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	17	79914949	79914949	C	T	SNP	NOTUM	ENST00000409678	human	ensembl	69_37n	-1	known	missense	c.697	p.A233T	1.000	pfam_Pec_acetylest	pfam_Pec_acetylest	-	no_errors	NOTUM	HGNC	ENSG00000185269	22	0	0.00	11	26	70.27	-	-	-
NUP62	0	genome.wustl.edu	37	19	50412785	50412785	+	Missense_Mutation	SNP	C	C	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	19	50412785	50412785	C	A	SNP	NUP62	ENST00000352066	human	ensembl	69_37n	-1	known	missense	c.280	p.A94S	0.000	NULL	pfam_Nucleoporin_NSP1_C	-	no_errors	NUP62	HGNC	ENSG00000213024	118	0	0.00	98	60	37.97	-	-	-
OFD1	0	genome.wustl.edu	37	X	13776561	13776561	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	X	13776561	13776561	C	T	SNP	OFD1	ENST00000340096	human	ensembl	69_37n	+1	known	nonsense	c.1648	p.Q550*	0.998	NULL	superfamily_Lipoprotein_6,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	OFD1	HGNC	ENSG00000046651	154	0	0.00	108	37	25.52	-	-	-
PPFIBP2	0	genome.wustl.edu	37	11	7650734	7650734	+	Silent	SNP	G	G	T			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	11	7650734	7650734	G	T	SNP	PPFIBP2	ENST00000299492	human	ensembl	69_37n	+1	known	silent	c.933	p.R311	0.475	NULL	pfam_SAM_2,pfam_SAM_type1,pfam_Integrase_Tn916-type_DNA-bd_N,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIBP2	HGNC	ENSG00000166387	194	0	0.00	162	64	28.32	-	-	-
PSMD11	0	genome.wustl.edu	37	17	30771560	30771560	+	Missense_Mutation	SNP	G	G	C			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	17	30771560	30771560	G	C	SNP	PSMD11	ENST00000261712	human	ensembl	69_37n	+1	known	missense	c.19	p.V7L	1.000	NULL	pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	PSMD11	HGNC	ENSG00000108671	32	0	0.00	19	13	40.62	-	-	-
RANBP6	0	genome.wustl.edu	37	9	6012961	6012961	+	Missense_Mutation	SNP	T	T	C			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	9	6012961	6012961	T	C	SNP	RANBP6	ENST00000259569	human	ensembl	69_37n	-1	known	missense	c.2647	p.S883G	0.932	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	RANBP6	HGNC	ENSG00000137040	84	0	0.00	40	56	58.33	-	-	-
SCN4A	0	genome.wustl.edu	37	17	62022840	62022840	+	Missense_Mutation	SNP	G	G	C			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	17	62022840	62022840	G	C	SNP	SCN4A	ENST00000435607	human	ensembl	69_37n	-1	known	missense	c.3600	p.I1200M	0.255	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN4A	HGNC	ENSG00000007314	109	0	0.00	674	267	28.37	-	-	-
SNAI1	0	genome.wustl.edu	37	20	48604526	48604526	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	20	48604526	48604526	G	A	SNP	SNAI1	ENST00000244050	human	ensembl	69_37n	+1	known	missense	c.728	p.R243Q	0.963	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI1	HGNC	ENSG00000124216	94	0	0.00	167	74	30.71	-	-	-
SPEN	0	genome.wustl.edu	37	1	16258909	16258915	+	Frame_Shift_Del	DEL	CCCTGTT	CCCTGTT	-			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	CCCTGTT	CCCTGTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	1	16258909	16258915	CCCTGTT	-	DEL	SPEN	ENST00000375759	human	ensembl	69_37n	+1	known	frame_shift_del	c.6174_6180	p.P2059fs	0.005:0.012:0.131:0.122:0.233:0.299:0.561	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526	135	0	0.00	39	9	17.65	-	-	-
TH1L	0	genome.wustl.edu	37	20	57566094	57566094	+	Missense_Mutation	SNP	G	G	C			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	20	57566094	57566094	G	C	SNP	TH1L	ENST00000344018	human	ensembl	69_37n	+1	known	missense	c.945	p.K315N	1.000	pfam_TH1	pfam_TH1	-	no_errors	TH1L	HGNC	ENSG00000101158	83	0	0.00	147	27	15.52	-	-	-
TRBV6-8	0	genome.wustl.edu	37	7	142124196	142124196	+	Silent	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	7	142124196	142124196	G	A	SNP	TRBV6-8	ENST00000390376	human	ensembl	69_37n	-1	known	silent	c.282	p.L94	0.183	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon:bad_bp_length_for_coding_region	TRBV6-8	HGNC	ENSG00000253534	150	0	0.00	176	47	21.08	-	-	-
UBAP1L	0	genome.wustl.edu	37	15	65385553	65385553	+	Missense_Mutation	SNP	C	C	T			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	15	65385553	65385553	C	T	SNP	UBAP1L	ENST00000502113	human	ensembl	69_37n	-1	known	missense	c.1028	p.R343H	0.477	superfamily_UBA-like	superfamily_UBA-like	-	no_errors	UBAP1L	HGNC	ENSG00000246922	37	0	0.00	21	9	30.00	-	-	-
ZBTB11	0	genome.wustl.edu	37	3	101378855	101378855	+	Missense_Mutation	SNP	A	A	C			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	3	101378855	101378855	A	C	SNP	ZBTB11	ENST00000312938	human	ensembl	69_37n	-1	known	missense	c.1818	p.F606L	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB11	HGNC	ENSG00000066422	135	0	0.00	82	61	42.66	-	-	-
ZNF543	0	genome.wustl.edu	37	19	57839971	57839971	+	Missense_Mutation	SNP	G	G	A			TCGA-A1-A0SJ-01A-11D-A099-09	TCGA-A1-A0SJ-10A-02D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a55c6a44-c0f5-4300-8df4-4a70befe2d3b	aaf63cff-b2e2-4f9b-868e-e7a1637cc14b	19	57839971	57839971	G	A	SNP	ZNF543	ENST00000321545	human	ensembl	69_37n	+1	known	missense	c.1141	p.D381N	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF543	HGNC	ENSG00000178229	127	0	0.00	101	15	12.93	-	-	-
