Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AOX1	0	genome.wustl.edu	37	2	201467067	201467070	+	Frame_Shift_Del	DEL	AAGT	AAGT	-			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	AAGT	AAGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	2	201467067	201467070	AAGT	-	DEL	AOX1	ENST00000374700	human	ensembl	69_37n	+1	known	frame_shift_del	c.497_498	p.K166fs	1.000:0.998	superfamily_2Fe-2S-bd,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase	-	no_errors	AOX1	HGNC	ENSG00000138356	91	0	0.00	39	8	17.02	-	-	-
ATPAF1	0	genome.wustl.edu	37	1	47119504	47119504	+	Silent	SNP	G	G	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	1	47119504	47119504	G	A	SNP	ATPAF1	ENST00000576409	human	ensembl	69_37n	-1	known	silent	c.594	p.V198	1.000	pfam_ATP11	pfam_ATP11	-	no_errors	ATPAF1	HGNC	ENSG00000123472	88	0	0.00	64	19	22.89	-	-	-
CENPK	0	genome.wustl.edu	37	5	64814460	64814460	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	5	64814460	64814460	T	A	SNP	CENPK	ENST00000242872	human	ensembl	69_37n	-1	known	missense	c.652	p.I218F	1.000	pfam_Centromere_CenpK	pfam_Centromere_CenpK,superfamily_Prefoldin	-	no_errors	CENPK	HGNC	ENSG00000123219	48	0	0.00	28	10	26.32	-	-	-
CORO2A	0	genome.wustl.edu	37	9	100888910	100888910	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	9	100888910	100888910	T	G	SNP	CORO2A	ENST00000343933	human	ensembl	69_37n	-1	known	missense	c.1367	p.H456P	0.002	NULL	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO2A	HGNC	ENSG00000106789	74	0	0.00	45	9	16.67	-	-	-
CREBBP	0	genome.wustl.edu	37	16	3827658	3827658	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	16	3827658	3827658	T	C	SNP	CREBBP	ENST00000262367	human	ensembl	69_37n	-1	known	missense	c.2114	p.N705S	1.000	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	43	0	0.00	30	13	30.23	-	-	-
EPS8L2	0	genome.wustl.edu	37	11	722123	722125	+	In_Frame_Del	DEL	CGC	CGC	-			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	CGC	CGC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	11	722123	722125	CGC	-	DEL	EPS8L2	ENST00000318562	human	ensembl	69_37n	+1	known	in_frame_del	c.1017_1019	p.A341in_frame_del	0.999:1.000:0.998	NULL	pfam_PTB,pfam_SH3_domain,pfam_PTyr_interaction_dom,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTyr_interaction_dom,smart_SH3_domain,pfscan_PTyr_interaction_dom,pfscan_SH3_domain	-	no_errors	EPS8L2	HGNC	ENSG00000177106	17	0	0.00	11	2	15.38	-	-	-
FAM86B1	0	genome.wustl.edu	37	8	12044262	12044262	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	8	12044262	12044262	G	A	SNP	FAM86B1	ENST00000321602	human	ensembl	69_37n	-1	known	missense	c.5	p.P2L	0.966	NULL	NULL	-	no_errors	FAM86B1	HGNC	ENSG00000186523	10	0	0.00	13	7	35.00	-	-	-
HS6ST1	0	genome.wustl.edu	37	2	129025860	129025860	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	2	129025860	129025860	C	T	SNP	HS6ST1	ENST00000259241	human	ensembl	69_37n	-1	known	missense	c.1112	p.R371H	1.000	NULL	pfam_Sulfotransferase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	14	0	0.00	8	5	38.46	-	-	-
HS6ST1	0	genome.wustl.edu	37	2	129075961	129075961	+	Silent	SNP	T	T	C			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	2	129075961	129075961	T	C	SNP	HS6ST1	ENST00000259241	human	ensembl	69_37n	-1	known	silent	c.177	p.T59	1.000	NULL	pfam_Sulfotransferase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	12	0	0.00	6	7	53.85	-	-	-
KIAA1239	0	genome.wustl.edu	37	4	37446047	37446047	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	4	37446047	37446047	C	A	SNP	KIAA1239	ENST00000309447	human	ensembl	69_37n	+1	known	missense	c.2437	p.Q813K	1.000	NULL	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1239	HGNC	ENSG00000174145	27	0	0.00	15	17	53.12	-	-	-
KRT31	0	genome.wustl.edu	37	17	39551243	39551243	+	Silent	SNP	G	G	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	17	39551243	39551243	G	T	SNP	KRT31	ENST00000251645	human	ensembl	69_37n	-1	known	silent	c.954	p.I318	0.997	pfam_F,prints_Keratin_I	pfam_F,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT31	HGNC	ENSG00000094796	110	0	0.00	99	87	46.77	-	-	-
LPPR2	0	genome.wustl.edu	37	19	11475316	11475316	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	19	11475316	11475316	C	T	SNP	LPPR2	ENST00000591608	human	ensembl	69_37n	+1	known	missense	c.1234	p.R412W	1.000	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR2	Clone_based_vega_gene	ENSG00000105520	42	0	0.00	15	4	19.05	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56177035	56177035	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	5	56177035	56177035	C	T	SNP	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	missense	c.2305	p.P769S	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	139	0	0.00	81	15	15.62	-	-	-
MCAM	0	genome.wustl.edu	37	11	119185262	119185262	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	11	119185262	119185262	C	T	SNP	MCAM	ENST00000264036	human	ensembl	69_37n	-1	known	missense	c.496	p.G166R	0.981	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Immunoglobulin,pfam_CD80_C2-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	MCAM	HGNC	ENSG00000076706	29	0	0.00	12	12	50.00	-	-	-
MOCOS	0	genome.wustl.edu	37	18	33785062	33785062	+	Silent	SNP	G	G	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	18	33785062	33785062	G	A	SNP	MOCOS	ENST00000261326	human	ensembl	69_37n	+1	known	silent	c.1041	p.Q347	0.656	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_MOSC_N,pfam_MoCF_Sase_C,pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase_major_dom,superfamily_Pyrv_Knase-like_insert_dom	-	no_errors	MOCOS	HGNC	ENSG00000075643	50	0	0.00	34	11	24.44	-	-	-
MRPS7	0	genome.wustl.edu	37	17	73259535	73259536	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	17	73259535	73259536	TG	-	DEL	MRPS7	ENST00000245539	human	ensembl	69_37n	+1	known	frame_shift_del	c.454_455	p.C152fs	1.000:1.000	pfam_Ribosomal_S7_dom,superfamily_Ribosomal_S7_dom	pfam_Ribosomal_S7_dom,superfamily_Ribosomal_S7_dom	-	no_errors	MRPS7	HGNC	ENSG00000125445	67	0	0.00	47	13	21.31	-	-	-
MUC4	0	genome.wustl.edu	37	3	195506940	195506940	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	3	195506940	195506940	G	C	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.11511	p.H3837Q	0.197	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	36	0	0.00	40	5	11.11	-	-	-
MXRA5	0	genome.wustl.edu	37	X	3242907	3242907	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	X	3242907	3242907	C	A	SNP	MXRA5	ENST00000217939	human	ensembl	69_37n	-1	known	missense	c.819	p.M273I	0.000	smart_Cys-rich_flank_reg_C	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	MXRA5	HGNC	ENSG00000101825	70	0	0.00	39	10	20.41	-	-	-
NFIB	0	genome.wustl.edu	37	9	14307139	14307139	+	Silent	SNP	C	C	G			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	9	14307139	14307139	C	G	SNP	NFIB	ENST00000397581	human	ensembl	69_37n	-1	known	silent	c.411	p.L137	1.000	pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIB	HGNC	ENSG00000147862	85	0	0.00	42	8	16.00	-	-	-
PHKA2	0	genome.wustl.edu	37	X	18911702	18911702	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	X	18911702	18911702	G	T	SNP	PHKA2	ENST00000379942	human	ensembl	69_37n	-1	known	missense	c.3609	p.S1203R	0.755	NULL	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC	ENSG00000044446	86	0	0.00	38	8	17.39	-	-	-
PTPRZ1	0	genome.wustl.edu	37	7	121659196	121659196	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	7	121659196	121659196	A	G	SNP	PTPRZ1	ENST00000393386	human	ensembl	69_37n	+1	known	missense	c.4862	p.H1621R	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a	-	no_errors	PTPRZ1	HGNC	ENSG00000106278	138	0	0.00	78	12	13.33	-	-	-
RNA5SP283	0	genome.wustl.edu	37	9	66458151	66458151	+	RNA	DEL	G	G	-			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	9	66458151	66458151	G	-	DEL	RNA5SP283	ENST00000365604	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.033	-	-	-	no_errors	RNA5SP283	HGNC	ENSG00000202474	15	0	0.00	3	2	40.00	-	-	-
SEPHS1	0	genome.wustl.edu	37	10	13378339	13378339	+	Silent	SNP	C	C	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	10	13378339	13378339	C	T	SNP	SEPHS1	ENST00000327347	human	ensembl	69_37n	-1	known	silent	c.309	p.A103	0.756	pfam_AIR_synth,superfamily_PurM_N-like,pirsf_SelD,tigrfam_SelD	pfam_AIR_synth_C,pfam_AIR_synth,superfamily_AIR_synth_C,superfamily_PurM_N-like,pirsf_SelD,tigrfam_SelD	-	no_errors	SEPHS1	HGNC	ENSG00000086475	59	0	0.00	35	14	28.57	-	-	-
SF3B2	0	genome.wustl.edu	37	11	65826508	65826508	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	11	65826508	65826508	G	A	SNP	SF3B2	ENST00000322535	human	ensembl	69_37n	+1	known	missense	c.1174	p.A392T	1.000	NULL	pfam_DUF382,pfam_PSP,pfam_SAP_DNA-bd,smart_SAP_DNA-bd,smart_PSP,pfscan_SAP_DNA-bd	-	no_errors	SF3B2	HGNC	ENSG00000087365	52	0	0.00	32	7	17.95	-	-	-
SLC41A3	0	genome.wustl.edu	37	3	125727702	125727702	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	3	125727702	125727702	C	T	SNP	SLC41A3	ENST00000315891	human	ensembl	69_37n	-1	known	missense	c.1127	p.R376Q	1.000	pfam_MgtE_Mg_transptr_membr	pfam_MgtE_Mg_transptr_membr,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	SLC41A3	HGNC	ENSG00000114544	28	0	0.00	11	12	52.17	-	-	-
SLC7A8	0	genome.wustl.edu	37	14	23609736	23609736	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	14	23609736	23609736	G	T	SNP	SLC7A8	ENST00000339733	human	ensembl	69_37n	-1	known	missense	c.368	p.P123H	1.000	pfam_AA-permease_dom	pfam_AA-permease_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SLC7A8	HGNC	ENSG00000092068	59	0	0.00	35	4	10.26	-	-	-
TP53	0	genome.wustl.edu	37	17	7577609	7577609	+	Splice_Site	SNP	C	C	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	17	7577609	7577609	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	splice_site	c.673-1	e6-1	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	63	0	0.00	17	17	50.00	-	-	-
TRIB2	0	genome.wustl.edu	37	2	12880637	12880637	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	2	12880637	12880637	G	A	SNP	TRIB2	ENST00000155926	human	ensembl	69_37n	+1	known	missense	c.749	p.G250E	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	TRIB2	HGNC	ENSG00000071575	40	0	0.00	25	12	32.43	-	-	-
TSPAN12	0	genome.wustl.edu	37	7	120446741	120446741	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	7	120446741	120446741	C	A	SNP	TSPAN12	ENST00000222747	human	ensembl	69_37n	-1	known	missense	c.474	p.K158N	1.000	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN12	HGNC	ENSG00000106025	47	0	0.00	34	6	15.00	-	-	-
TTN	0	genome.wustl.edu	37	2	179469435	179469435	+	Silent	SNP	C	C	G			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	2	179469435	179469435	C	G	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	silent	c.46677	p.G15559	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	85	0	0.00	53	22	29.33	-	-	-
XIRP2	0	genome.wustl.edu	37	2	168102346	168102346	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	2	168102346	168102346	G	T	SNP	XIRP2	ENST00000295237	human	ensembl	69_37n	+1	known	missense	c.4444	p.V1482L	0.656	NULL	pfam_Actin-binding_Xin_repeat,superfamily_FH2_actin-bd	-	no_errors	XIRP2	HGNC	ENSG00000163092	40	0	0.00	35	9	20.45	-	-	-
ZBTB38	0	genome.wustl.edu	37	3	141161656	141161656	+	Silent	SNP	A	A	C			TCGA-A2-A1G1-01A-21D-A13L-09	TCGA-A2-A1G1-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	afe70076-1044-4fdd-bebc-14a97b1a8363	24968a8a-5969-4b98-9d06-f286f771fb53	3	141161656	141161656	A	C	SNP	ZBTB38	ENST00000321464	human	ensembl	69_37n	+1	known	silent	c.429	p.G143	0.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB38	HGNC	ENSG00000177311	47	0	0.00	33	6	15.38	-	-	-
