Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS1	0	genome.wustl.edu	37	21	28210246	28210246	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	21	28210246	28210246	G	C	SNP	ADAMTS1	ENST00000284984	human	ensembl	69_37n	-1	known	missense	c.2556	p.I852M	0.954	superfamily_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS1,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS1	HGNC	ENSG00000154734	97	0	0.00	65	30	31.58	-	-	-
ADM	0	genome.wustl.edu	37	11	10327891	10327891	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	11	10327891	10327891	C	G	SNP	ADM	ENST00000526492	human	ensembl	69_37n	+1	putative	missense	c.292	p.R98G	0.001	NULL	pfam_Procalcitonin/adrenomedullin,prints_Adrenomedullin	-	no_errors	ADM	HGNC	ENSG00000148926	82	0	0.00	51	7	12.07	-	-	-
ANKFN1	0	genome.wustl.edu	37	17	54428239	54428239	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	17	54428239	54428239	T	G	SNP	ANKFN1	ENST00000318698	human	ensembl	69_37n	+1	known	missense	c.310	p.S104A	1.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Fibronectin_type3,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Fibronectin_type3	-	no_errors	ANKFN1	HGNC	ENSG00000153930	31	0	0.00	17	11	39.29	-	-	-
ANKRD30B	0	genome.wustl.edu	37	18	14850235	14850235	+	Nonsense_Mutation	SNP	G	G	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	18	14850235	14850235	G	T	SNP	ANKRD30B	ENST00000358984	human	ensembl	69_37n	+1	known	nonsense	c.3061	p.E1021*	0.996	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	48	0	0.00	30	6	16.67	-	-	-
ANKRD30B	0	genome.wustl.edu	37	18	14850242	14850242	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	18	14850242	14850242	G	T	SNP	ANKRD30B	ENST00000358984	human	ensembl	69_37n	+1	known	missense	c.3068	p.R1023I	0.999	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	50	0	0.00	30	6	16.67	-	-	-
ARGLU1	0	genome.wustl.edu	37	13	107210040	107210040	+	RNA	SNP	A	A	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	13	107210040	107210040	A	T	SNP	ARGLU1	ENST00000472226	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ARGLU1	HGNC	ENSG00000134884	23	0	0.00	12	8	40.00	-	-	-
ARHGEF28	0	genome.wustl.edu	37	5	73190346	73190346	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	5	73190346	73190346	G	A	SNP	ARHGEF28	ENST00000545377	human	ensembl	69_37n	+1	known	missense	c.3787	p.D1263N	0.994	NULL	pfam_DH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF28	HGNC	ENSG00000214944	34	0	0.00	23	5	17.86	-	-	-
C21orf119	0	genome.wustl.edu	37	21	33765572	33765572	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	21	33765572	33765572	C	T	SNP	C21orf119	ENST00000534991	human	ensembl	69_37n	+1	known	missense	c.41	p.A14V	0.003	NULL	NULL	-	no_errors	C21orf119	HGNC	ENSG00000256073	65	0	0.00	57	33	36.67	-	-	-
C7orf62	0	genome.wustl.edu	37	7	88423580	88423580	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	7	88423580	88423580	G	A	SNP	C7orf62	ENST00000297203	human	ensembl	69_37n	-1	known	missense	c.677	p.P226L	0.977	NULL	NULL	-	no_errors	C7orf62	HGNC	ENSG00000164645	60	0	0.00	36	13	26.53	-	-	-
C7orf72	0	genome.wustl.edu	37	7	50135957	50135957	+	Nonsense_Mutation	SNP	T	T	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	7	50135957	50135957	T	A	SNP	C7orf72	ENST00000297001	human	ensembl	69_37n	+1	known	nonsense	c.276	p.Y92*	0.001	NULL	NULL	-	no_errors	C7orf72	HGNC	ENSG00000164500	82	0	0.00	42	16	27.59	-	-	-
C9orf85	0	genome.wustl.edu	37	9	74562026	74562026	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	9	74562026	74562026	G	C	SNP	C9orf85	ENST00000377031	human	ensembl	69_37n	+1	known	missense	c.207	p.K69N	1.000	pfam_DUF2039	pfam_DUF2039	-	no_errors	C9orf85	HGNC	ENSG00000155621	75	0	0.00	49	20	28.99	-	-	-
CASK	0	genome.wustl.edu	37	X	41530686	41530686	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	X	41530686	41530686	G	C	SNP	CASK	ENST00000378163	human	ensembl	69_37n	-1	known	missense	c.527	p.A176G	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Guanylate_kin,pfam_L27_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_L27,smart_PDZ,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,pfscan_Guanylate_kin	-	no_errors	CASK	HGNC	ENSG00000147044	140	0	0.00	73	28	27.72	-	-	-
CDH23	0	genome.wustl.edu	37	10	73377107	73377107	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	10	73377107	73377107	G	C	SNP	CDH23	ENST00000224721	human	ensembl	69_37n	+1	known	missense	c.1106	p.G369A	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	74	0	0.00	50	8	13.79	-	-	-
CETP	0	genome.wustl.edu	37	16	57003847	57003847	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	16	57003847	57003847	G	A	SNP	CETP	ENST00000200676	human	ensembl	69_37n	+1	known	missense	c.461	p.R154Q	0.000	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,pirsf_Cholesteryl_ester_transfer	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C,pirsf_Cholesteryl_ester_transfer	-	no_errors	CETP	HGNC	ENSG00000087237	106	0	0.00	75	66	46.81	-	-	-
CHFR	0	genome.wustl.edu	37	12	133418098	133418098	+	RNA	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	12	133418098	133418098	C	A	SNP	CHFR	ENST00000535527	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CHFR	HGNC	ENSG00000072609	31	0	0.00	11	7	38.89	-	-	-
COL11A2	0	genome.wustl.edu	37	6	33130533	33130533	+	RNA	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	6	33130533	33130533	G	A	SNP	COL11A2	ENST00000477772	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	COL11A2	HGNC	ENSG00000204248	63	0	0.00	34	16	32.00	-	-	-
CSNK1G2	0	genome.wustl.edu	37	19	1978887	1978887	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	19	1978887	1978887	G	A	SNP	CSNK1G2	ENST00000589385	human	ensembl	69_37n	+1	novel	missense	c.520	p.E174K	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CSNK1G2	HGNC	ENSG00000133275	44	0	0.00	38	9	19.15	-	-	-
CYP2C19	0	genome.wustl.edu	37	10	96522609	96522609	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	10	96522609	96522609	T	A	SNP	CYP2C19	ENST00000371321	human	ensembl	69_37n	+1	known	missense	c.147	p.D49E	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2C19	HGNC	ENSG00000165841	76	0	0.00	44	13	22.81	-	-	-
DKFZp434L192	0	genome.wustl.edu	37	7	56562268	56562268	+	RNA	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	7	56562268	56562268	G	A	SNP	DKFZp434L192	ENST00000566570	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.404	-	-	-	no_errors	RP11-760D2.11	Clone_based_vega_gene	ENSG00000261275	9	0	0.00	14	7	33.33	-	-	-
DLG1	0	genome.wustl.edu	37	3	197009567	197009567	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	3	197009567	197009567	G	T	SNP	DLG1	ENST00000346964	human	ensembl	69_37n	-1	known	missense	c.301	p.L101I	1.000	pirsf_M-assoc_guanylate_kinase	pfam_Guanylate_kin,pfam_PDZ,pfam_MAGUK_PEST_N,pfam_L27_1,pfam_PDZ_assoc,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin	-	no_errors	DLG1	HGNC	ENSG00000075711	50	0	0.00	42	5	10.64	-	-	-
DNAH14	0	genome.wustl.edu	37	1	225492634	225492634	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	1	225492634	225492634	A	G	SNP	DNAH14	ENST00000430092	human	ensembl	69_37n	+1	known	missense	c.8569	p.T2857A	0.066	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,superfamily_Tautomerase,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	32	0	0.00	26	11	29.73	-	-	-
DTWD2	0	genome.wustl.edu	37	5	118176659	118176659	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	5	118176659	118176659	G	A	SNP	DTWD2	ENST00000510708	human	ensembl	69_37n	-1	known	missense	c.850	p.R284C	1.000	NULL	pfam_DTW	-	no_errors	DTWD2	HGNC	ENSG00000169570	112	0	0.00	112	14	11.11	-	-	-
EML6	0	genome.wustl.edu	37	2	55118197	55118198	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	2	55118197	55118198	-	A	INS	EML6	ENST00000356458	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.2445_2446	p.D816fs	0.996:1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML6	HGNC	ENSG00000214595	77	0	0.00	45	14	23.73	-	-	-
EXOC6B	0	genome.wustl.edu	37	2	72692351	72692351	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	2	72692351	72692351	C	T	SNP	EXOC6B	ENST00000272427	human	ensembl	69_37n	-1	known	missense	c.1918	p.D640N	1.000	pfam_Sec15,pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6B	HGNC	ENSG00000144036	75	0	0.00	72	18	20.00	-	-	-
FAM75D1	0	genome.wustl.edu	37	9	84609127	84609127	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	9	84609127	84609127	G	C	SNP	FAM75D1	ENST00000344803	human	ensembl	69_37n	+1	known	missense	c.3742	p.D1248H	0.000	NULL	NULL	-	no_errors	FAM75D1	HGNC	ENSG00000214929	112	0	0.00	51	45	46.39	-	-	-
FER1L6	0	genome.wustl.edu	37	8	125072506	125072506	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	8	125072506	125072506	C	T	SNP	FER1L6	ENST00000399018	human	ensembl	69_37n	+1	known	missense	c.2960	p.P987L	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_ABC_transptrTM_dom_typ1,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	FER1L6	HGNC	ENSG00000214814	110	0	0.00	84	18	17.65	-	-	-
FEZF2	0	genome.wustl.edu	37	3	62355985	62355985	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	3	62355985	62355985	C	G	SNP	FEZF2	ENST00000283268	human	ensembl	69_37n	-1	known	missense	c.1153	p.G385R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	FEZF2	HGNC	ENSG00000153266	170	0	0.00	85	19	18.27	-	-	-
FUNDC1	0	genome.wustl.edu	37	X	44386524	44386524	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	X	44386524	44386524	C	A	SNP	FUNDC1	ENST00000378045	human	ensembl	69_37n	-1	known	missense	c.349	p.A117S	1.000	pfam_FUN14	pfam_FUN14	-	no_errors	FUNDC1	HGNC	ENSG00000069509	67	0	0.00	38	18	32.14	-	-	-
GCSHP3	0	genome.wustl.edu	37	2	206981103	206981103	+	RNA	SNP	A	A	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	2	206981103	206981103	A	G	SNP	GCSHP3	ENST00000453039	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	AC007383.4	Clone_based_vega_gene	ENSG00000231955	23	0	0.00	7	6	46.15	-	-	-
GFPT1	0	genome.wustl.edu	37	2	69554198	69554198	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	2	69554198	69554198	C	A	SNP	GFPT1	ENST00000357308	human	ensembl	69_37n	-1	known	missense	c.1903	p.V635L	1.000	pfam_SIS,tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT1	HGNC	ENSG00000198380	74	0	0.00	41	12	22.64	-	-	-
GPRIN2	0	genome.wustl.edu	37	10	46999522	46999522	+	Silent	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	10	46999522	46999522	G	A	SNP	GPRIN2	ENST00000374314	human	ensembl	69_37n	+1	known	silent	c.642	p.E214	0.003	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175	96	0	0.00	62	12	16.00	-	-	-
GREB1	0	genome.wustl.edu	37	2	11725303	11725303	+	Silent	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	2	11725303	11725303	C	A	SNP	GREB1	ENST00000234142	human	ensembl	69_37n	+1	known	silent	c.918	p.S306	0.492	NULL	NULL	-	no_errors	GREB1	HGNC	ENSG00000196208	48	0	0.00	35	13	27.08	-	-	-
GTF2IRD2P1	0	genome.wustl.edu	37	7	72657755	72657755	+	RNA	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	7	72657755	72657755	G	A	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.892	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	136	0	0.00	73	30	29.13	-	-	-
GTPBP3	0	genome.wustl.edu	37	19	17448867	17448867	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	19	17448867	17448867	C	A	SNP	GTPBP3	ENST00000358792	human	ensembl	69_37n	+1	known	missense	c.104	p.T35N	1.000	pfam_GTP-bd_TrmE_N	pfam_GTP-bd_TrmE_N,pfam_GTP_binding_domain,tigrfam_Small_GTP-bd_dom	-	no_errors	GTPBP3	HGNC	ENSG00000130299	29	0	0.00	26	12	31.58	-	-	-
GUCA1C	0	genome.wustl.edu	37	3	108626879	108626879	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	3	108626879	108626879	T	C	SNP	GUCA1C	ENST00000261047	human	ensembl	69_37n	-1	known	missense	c.620	p.K207R	0.000	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,prints_Recoverin	-	no_errors	GUCA1C	HGNC	ENSG00000138472	75	0	0.00	40	24	37.50	-	-	-
HOOK3	0	genome.wustl.edu	37	8	42823321	42823321	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	8	42823321	42823321	C	G	SNP	HOOK3	ENST00000307602	human	ensembl	69_37n	+1	known	missense	c.1086	p.N362K	1.000	pfam_HOOK	pfam_HOOK,superfamily_t-SNARE	-	no_errors	HOOK3	HGNC	ENSG00000168172	24	0	0.00	13	9	40.91	-	-	-
IGHV3-35	0	genome.wustl.edu	37	14	106845422	106845422	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	14	106845422	106845422	C	G	SNP	IGHV3-35	ENST00000390617	human	ensembl	69_37n	-1	known	missense	c.252	p.K84N	0.999	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV3-35	HGNC	ENSG00000211957	130	0	0.00	77	16	17.20	-	-	-
IGSF1	0	genome.wustl.edu	37	X	130409477	130409477	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	X	130409477	130409477	G	T	SNP	IGSF1	ENST00000370903	human	ensembl	69_37n	-1	known	missense	c.3174	p.S1058R	1.000	smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	IGSF1	HGNC	ENSG00000147255	98	0	0.00	69	14	16.87	-	-	-
IL6	0	genome.wustl.edu	37	7	22767176	22767176	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	7	22767176	22767176	C	A	SNP	IL6	ENST00000420258	human	ensembl	69_37n	+1	known	missense	c.295	p.Q99K	0.000	NULL	pfam_IL6_MGF_GCSF,superfamily_4_helix_cytokine-like_core,smart_IL6_MGF_GCSF,prints_Interleukin_6,prints_IL6_MGF_GCSF	-	no_errors	IL6	HGNC	ENSG00000136244	90	0	0.00	51	20	27.78	-	-	-
ITGB6	0	genome.wustl.edu	37	2	160983046	160983046	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	2	160983046	160983046	C	A	SNP	ITGB6	ENST00000283249	human	ensembl	69_37n	-1	known	missense	c.1727	p.C576F	1.000	pirsf_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB6	HGNC	ENSG00000115221	31	0	0.00	26	8	23.53	-	-	-
KDR	0	genome.wustl.edu	37	4	55976929	55976929	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	4	55976929	55976929	G	T	SNP	KDR	ENST00000263923	human	ensembl	69_37n	-1	known	missense	c.983	p.P328H	1.000	pfscan_Ig-like	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Tyr_kinase_VEGFR2_rcpt,prints_Tyr_kinase_VEGFR_rcpt_N	-	no_errors	KDR	HGNC	ENSG00000128052	38	0	0.00	35	15	30.00	-	-	-
KDR	0	genome.wustl.edu	37	4	55981116	55981116	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	4	55981116	55981116	C	A	SNP	KDR	ENST00000263923	human	ensembl	69_37n	-1	known	missense	c.583	p.A195S	1.000	smart_Ig_sub,prints_Tyr_kinase_VEGFR2_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Tyr_kinase_VEGFR2_rcpt,prints_Tyr_kinase_VEGFR_rcpt_N	-	no_errors	KDR	HGNC	ENSG00000128052	59	0	0.00	41	10	19.61	-	-	-
KIR3DL2	0	genome.wustl.edu	37	19	55365320	55365320	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	19	55365320	55365320	G	T	SNP	KIR3DL2	ENST00000326321	human	ensembl	69_37n	+1	known	missense	c.474	p.E158D	0.000	smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL2	HGNC	ENSG00000240403	17	0	0.00	8	3	27.27	-	-	-
KRT121P	0	genome.wustl.edu	37	12	52647411	52647411	+	RNA	SNP	C	C	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	12	52647411	52647411	C	G	SNP	KRT121P	ENST00000529785	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KRT121P	HGNC	ENSG00000135477	102	0	0.00	76	18	19.15	-	-	-
LAMC3	0	genome.wustl.edu	37	9	133967273	133967273	+	RNA	SNP	G	G	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	9	133967273	133967273	G	C	SNP	LAMC3	ENST00000462567	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LAMC3	HGNC	ENSG00000050555	21	0	0.00	5	4	44.44	-	-	-
LDHAL6CP	0	genome.wustl.edu	37	12	63397682	63397682	+	RNA	SNP	A	A	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	12	63397682	63397682	A	G	SNP	LDHAL6CP	ENST00000550738	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.935	-	-	-	no_errors	LDHAL6CP	HGNC	ENSG00000250517	83	0	0.00	44	5	10.20	-	-	-
LGR4	0	genome.wustl.edu	37	11	27390453	27390453	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	11	27390453	27390453	G	A	SNP	LGR4	ENST00000379214	human	ensembl	69_37n	-1	known	missense	c.1817	p.A606V	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Gphrmn_rcpt	pfam_Leu-rich_rpt,pfam_7TM_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pfscan_GPCR_Rhodpsn_supfam,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	LGR4	HGNC	ENSG00000205213	50	0	0.00	50	9	15.25	-	-	-
LHX5	0	genome.wustl.edu	37	12	113909155	113909155	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	12	113909155	113909155	A	-	DEL	LHX5	ENST00000261731	human	ensembl	69_37n	-1	known	frame_shift_del	c.149	p.L50fs	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeodomain,pfscan_Znf_LIM,pfscan_Homeodomain	-	no_errors	LHX5	HGNC	ENSG00000089116	93	0	0.00	50	8	13.56	-	-	-
LRP1B	0	genome.wustl.edu	37	2	141773300	141773300	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	2	141773300	141773300	T	A	SNP	LRP1B	ENST00000389484	human	ensembl	69_37n	-1	known	missense	c.2155	p.I719F	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_dom,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	54	0	0.00	17	7	29.17	-	-	-
MAGED1	0	genome.wustl.edu	37	X	51644929	51644929	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	X	51644929	51644929	C	T	SNP	MAGED1	ENST00000375695	human	ensembl	69_37n	+1	known	missense	c.2408	p.P803L	1.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222	73	0	0.00	46	23	33.33	-	-	-
MAGOH	0	genome.wustl.edu	37	1	53699120	53699120	+	RNA	SNP	G	G	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	1	53699120	53699120	G	T	SNP	MAGOH	ENST00000462941	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	MAGOH	HGNC	ENSG00000162385	42	0	0.00	33	4	10.81	-	-	-
MRE11A	0	genome.wustl.edu	37	11	94219175	94219175	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	11	94219175	94219175	C	T	SNP	MRE11A	ENST00000323929	human	ensembl	69_37n	-1	known	missense	c.229	p.E77K	0.994	pfam_Metallo_PEstase_dom,pirsf_DNA_repair_Mre11,tigrfam_DNA_repair_Mre11	pfam_Mre11_DNA-bd,pfam_Metallo_PEstase_dom,pirsf_DNA_repair_Mre11,tigrfam_DNA_repair_Mre11	-	no_errors	MRE11A	HGNC	ENSG00000020922	29	0	0.00	21	4	16.00	-	-	-
NCOR2	0	genome.wustl.edu	37	12	124816871	124816871	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	12	124816871	124816871	C	A	SNP	NCOR2	ENST00000356219	human	ensembl	69_37n	-1	known	nonsense	c.6919	p.E2307*	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	122	0	0.00	52	11	17.46	-	-	-
NLRP5	0	genome.wustl.edu	37	19	56565030	56565030	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	19	56565030	56565030	C	T	SNP	NLRP5	ENST00000390649	human	ensembl	69_37n	+1	known	missense	c.3155	p.A1052V	0.000	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP5	HGNC	ENSG00000171487	68	0	0.00	29	36	55.38	-	-	-
PCDH11X	0	genome.wustl.edu	37	X	91456404	91456404	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	X	91456404	91456404	C	A	SNP	PCDH11X	ENST00000373094	human	ensembl	69_37n	+1	known	missense	c.3064	p.P1022T	0.182	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	97	0	0.00	80	12	13.04	-	-	-
PITPNB	0	genome.wustl.edu	37	22	28315170	28315170	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	22	28315170	28315170	T	A	SNP	PITPNB	ENST00000320996	human	ensembl	69_37n	-1	known	missense	c.10	p.I4F	1.000	pfam_PI_transfer	pfam_PI_transfer,prints_PI_transfer	-	no_errors	PITPNB	HGNC	ENSG00000180957	62	0	0.00	30	25	45.45	-	-	-
POMT2	0	genome.wustl.edu	37	14	77762553	77762553	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	14	77762553	77762553	G	A	SNP	POMT2	ENST00000261534	human	ensembl	69_37n	-1	known	missense	c.1070	p.S357F	1.000	pfam_MIR,superfamily_MIR,smart_MIR_motif,pfscan_MIR_motif	pfam_Glyco_trans_39,pfam_MIR,superfamily_MIR,smart_MIR_motif,pfscan_MIR_motif	-	no_errors	POMT2	HGNC	ENSG00000009830	69	0	0.00	59	18	23.38	-	-	-
RASGRP4	0	genome.wustl.edu	37	19	38911597	38911597	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	19	38911597	38911597	T	G	SNP	RASGRP4	ENST00000587738	human	ensembl	69_37n	-1	known	missense	c.328	p.T110P	0.547	superfamily_Ras_GEF_dom,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_DAG/PE-bd	-	no_errors	RASGRP4	HGNC	ENSG00000171777	102	0	0.00	72	12	14.29	-	-	-
RBMS3	0	genome.wustl.edu	37	3	29938890	29938890	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	3	29938890	29938890	G	C	SNP	RBMS3	ENST00000383767	human	ensembl	69_37n	+1	known	missense	c.812	p.S271T	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,prints_Hud_Sxl_RNA,pfscan_RRM_dom	-	no_errors	RBMS3	HGNC	ENSG00000144642	43	0	0.00	20	8	28.57	-	-	-
RIMS3	0	genome.wustl.edu	37	1	41107465	41107465	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	1	41107465	41107465	G	A	SNP	RIMS3	ENST00000372683	human	ensembl	69_37n	-1	known	missense	c.133	p.R45W	1.000	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	RIMS3	HGNC	ENSG00000117016	65	0	0.00	37	35	48.61	-	-	-
RRN3P1	0	genome.wustl.edu	37	16	21817530	21817530	+	RNA	SNP	T	T	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	16	21817530	21817530	T	C	SNP	RRN3P1	ENST00000546471	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RRN3P1	HGNC	ENSG00000248124	98	0	0.00	81	61	42.96	-	-	-
SEH1L	0	genome.wustl.edu	37	18	12984155	12984155	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	18	12984155	12984155	C	T	SNP	SEH1L	ENST00000399892	human	ensembl	69_37n	+1	known	missense	c.1036	p.L346F	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEH1L	HGNC	ENSG00000085415	64	0	0.00	47	6	11.32	-	-	-
SEH1L	0	genome.wustl.edu	37	18	12984180	12984180	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	18	12984180	12984180	C	T	SNP	SEH1L	ENST00000399892	human	ensembl	69_37n	+1	known	missense	c.1061	p.S354F	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEH1L	HGNC	ENSG00000085415	62	0	0.00	43	6	12.24	-	-	-
SETD5	0	genome.wustl.edu	37	3	9482144	9482144	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	3	9482144	9482144	C	G	SNP	SETD5	ENST00000402198	human	ensembl	69_37n	+1	known	missense	c.572	p.S191C	1.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SETD5	HGNC	ENSG00000168137	55	0	0.00	35	22	38.60	-	-	-
SLC25A4	0	genome.wustl.edu	37	4	186066173	186066173	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	4	186066173	186066173	G	A	SNP	SLC25A4	ENST00000281456	human	ensembl	69_37n	+1	known	missense	c.367	p.A123T	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Aden_trnslctor	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier,prints_Aden_trnslctor,prints_Mit_uncoupling	-	no_errors	SLC25A4	HGNC	ENSG00000151729	61	0	0.00	37	9	19.57	-	-	-
SLIT2	0	genome.wustl.edu	37	4	20530616	20530616	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	4	20530616	20530616	G	T	SNP	SLIT2	ENST00000504154	human	ensembl	69_37n	+1	known	missense	c.1507	p.D503Y	1.000	NULL	pfam_EGF-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd,smart_EGF-like,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	50	0	0.00	29	14	32.56	-	-	-
SOX8	0	genome.wustl.edu	37	16	1034797	1034797	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	16	1034797	1034797	C	T	SNP	SOX8	ENST00000293894	human	ensembl	69_37n	+1	known	missense	c.752	p.P251L	0.011	NULL	pfam_HMG_superfamily,pfam_Sox_N,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	SOX8	HGNC	ENSG00000005513	72	0	0.00	98	19	16.10	-	-	-
SRRM2-AS1	0	genome.wustl.edu	37	16	2790163	2790163	+	RNA	SNP	C	C	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	16	2790163	2790163	C	G	SNP	SRRM2-AS1	ENST00000382313	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SRRM2-AS1	HGNC	ENSG00000205913	50	0	0.00	37	13	26.00	-	-	-
SSH2	0	genome.wustl.edu	37	17	28022491	28022491	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	17	28022491	28022491	C	A	SNP	SSH2	ENST00000269033	human	ensembl	69_37n	-1	known	missense	c.262	p.D88Y	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH2	HGNC	ENSG00000141298	39	0	0.00	20	11	35.48	-	-	-
TC2N	0	genome.wustl.edu	37	14	92264128	92264128	+	Splice_Site	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	14	92264128	92264128	C	A	SNP	TC2N	ENST00000340892	human	ensembl	69_37n	-1	known	splice_site	c.855+1	e7+1	0.996	-	-	-	no_errors	TC2N	HGNC	ENSG00000165929	67	0	0.00	38	5	11.63	-	-	-
TMEM132D	0	genome.wustl.edu	37	12	129569157	129569157	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	12	129569157	129569157	T	C	SNP	TMEM132D	ENST00000422113	human	ensembl	69_37n	-1	known	missense	c.1534	p.S512G	0.057	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952	81	0	0.00	58	7	10.77	-	-	-
TMEM19	0	genome.wustl.edu	37	12	72091146	72091146	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	12	72091146	72091146	G	-	DEL	TMEM19	ENST00000266673	human	ensembl	69_37n	+1	known	frame_shift_del	c.469	p.E158fs	1.000	pfam_DUF92_TMEM19	pfam_DUF92_TMEM19	-	no_errors	TMEM19	HGNC	ENSG00000139291	80	0	0.00	41	13	24.07	-	-	-
TP53	0	genome.wustl.edu	37	17	7577098	7577098	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	17	7577098	7577098	T	G	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.840	p.R280S	0.998	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	63	0	0.00	23	19	45.24	-	-	-
TP53BP1	0	genome.wustl.edu	37	15	43772084	43772084	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	15	43772084	43772084	T	A	SNP	TP53BP1	ENST00000382044	human	ensembl	69_37n	-1	known	missense	c.631	p.R211W	0.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369	151	0	0.00	154	46	22.89	-	-	-
TRAF6	0	genome.wustl.edu	37	11	36511783	36511783	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	11	36511783	36511783	G	A	SNP	TRAF6	ENST00000348124	human	ensembl	69_37n	-1	known	missense	c.1174	p.R392C	1.000	pfam_MATH,superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF6	HGNC	ENSG00000175104	106	0	0.00	60	12	16.44	-	-	-
TRIM21	0	genome.wustl.edu	37	11	4406636	4406636	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	11	4406636	4406636	C	G	SNP	TRIM21	ENST00000254436	human	ensembl	69_37n	-1	known	missense	c.1307	p.C436S	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,smart_Ubox_domain,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM21	HGNC	ENSG00000132109	58	0	0.00	36	13	26.53	-	-	-
TSPAN5	0	genome.wustl.edu	37	4	99399882	99399882	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	4	99399882	99399882	C	A	SNP	TSPAN5	ENST00000508798	human	ensembl	69_37n	-1	known	nonsense	c.466	p.E156*	1.000	NULL	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	-	no_errors	TSPAN5	HGNC	ENSG00000168785	50	0	0.00	29	14	32.56	-	-	-
XRN1	0	genome.wustl.edu	37	3	142131500	142131500	+	Silent	SNP	C	C	T			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	3	142131500	142131500	C	T	SNP	XRN1	ENST00000264951	human	ensembl	69_37n	-1	known	silent	c.1599	p.L533	1.000	pirsf_5_3_exoribonuclease_1	pfam_Put_53exo,pirsf_5_3_exoribonuclease_1	-	no_errors	XRN1	HGNC	ENSG00000114127	82	0	0.00	64	14	17.95	-	-	-
ZNF107	0	genome.wustl.edu	37	7	64167462	64167462	+	Silent	SNP	T	T	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	7	64167462	64167462	T	C	SNP	ZNF107	ENST00000344930	human	ensembl	69_37n	+1	known	silent	c.780	p.T260	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF107	HGNC	ENSG00000196247	33	0	0.00	28	11	28.21	-	-	-
ZNF252P	0	genome.wustl.edu	37	8	146202386	146202386	+	RNA	SNP	A	A	C			TCGA-A2-A4S1-01A-21D-A25Q-09	TCGA-A2-A4S1-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3a3dd048-d442-48aa-a6fe-40fcfbe48c7a	413a32b3-920e-41ae-b24d-321a0796645a	8	146202386	146202386	A	C	SNP	ZNF252P	ENST00000426361	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF252P	HGNC	ENSG00000196922	42	0	0.00	43	5	10.42	-	-	-
