Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCB8	0	genome.wustl.edu	37	7	150741305	150741305	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	7	150741305	150741305	G	T	SNP	ABCB8	ENST00000297504	human	ensembl	69_37n	+1	known	missense	c.2064	p.W688C	0.995	pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB8	HGNC	ENSG00000197150	112	0	0.00	93	20	17.70	-	-	-
ABCB8	0	genome.wustl.edu	37	7	150741305	150741305	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	7	150741305	150741305	G	T	SNP	ABCB8	ENST00000297504	human	ensembl	69_37n	+1	known	missense	c.2064	p.W688C	0.995	pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB8	HGNC	ENSG00000197150	54	0	0.00	93	20	17.70	-	-	-
ATAD2B	0	genome.wustl.edu	37	2	24092569	24092569	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	2	24092569	24092569	C	A	SNP	ATAD2B	ENST00000238789	human	ensembl	69_37n	-1	known	missense	c.1040	p.R347I	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778	485	0	0.00	358	112	23.83	-	-	-
ATAD2B	0	genome.wustl.edu	37	2	24092569	24092569	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	2	24092569	24092569	C	A	SNP	ATAD2B	ENST00000238789	human	ensembl	69_37n	-1	known	missense	c.1040	p.R347I	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778	652	0	0.00	358	112	23.83	-	-	-
BAZ2A	0	genome.wustl.edu	37	12	56992725	56992725	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	12	56992725	56992725	C	A	SNP	BAZ2A	ENST00000551812	human	ensembl	69_37n	-1	known	missense	c.5479	p.V1827L	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_integrase-typ,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108	83	0	0.00	69	41	37.27	-	-	-
BAZ2A	0	genome.wustl.edu	37	12	56992725	56992725	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	12	56992725	56992725	C	A	SNP	BAZ2A	ENST00000551812	human	ensembl	69_37n	-1	known	missense	c.5479	p.V1827L	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_integrase-typ,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108	81	0	0.00	69	41	37.27	-	-	-
BCORL1	0	genome.wustl.edu	37	X	129150177	129150177	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	X	129150177	129150177	C	T	SNP	BCORL1	ENST00000441294	human	ensembl	69_37n	+1	known	missense	c.1735	p.P579S	0.070	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	BCORL1	HGNC	ENSG00000085185	20	0	0.00	22	5	18.52	-	-	-
BCORL1	0	genome.wustl.edu	37	X	129150177	129150177	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	X	129150177	129150177	C	T	SNP	BCORL1	ENST00000441294	human	ensembl	69_37n	+1	known	missense	c.1735	p.P579S	0.070	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	BCORL1	HGNC	ENSG00000085185	29	0	0.00	22	5	18.52	-	-	-
BIRC6	0	genome.wustl.edu	37	2	32822992	32822992	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	2	32822992	32822992	G	T	SNP	BIRC6	ENST00000421745	human	ensembl	69_37n	+1	known	missense	c.13787	p.S4596I	1.000	pfam_UBQ-conjugat_E2,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	195	0	0.00	93	89	48.90	-	-	-
BIRC6	0	genome.wustl.edu	37	2	32822992	32822992	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	2	32822992	32822992	G	T	SNP	BIRC6	ENST00000421745	human	ensembl	69_37n	+1	known	missense	c.13787	p.S4596I	1.000	pfam_UBQ-conjugat_E2,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	259	0	0.00	93	89	48.90	-	-	-
C17orf101	0	genome.wustl.edu	37	17	80369359	80369359	+	Missense_Mutation	SNP	T	T	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	17	80369359	80369359	T	A	SNP	C17orf101	ENST00000329197	human	ensembl	69_37n	-1	known	missense	c.352	p.T118S	1.000	smart_Pro_4_hyd_alph	smart_Pro_4_hyd_alph	-	no_errors	C17orf101	HGNC	ENSG00000181396	81	0	0.00	61	19	23.75	-	-	-
C17orf101	0	genome.wustl.edu	37	17	80369359	80369359	+	Missense_Mutation	SNP	T	T	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	17	80369359	80369359	T	A	SNP	C17orf101	ENST00000329197	human	ensembl	69_37n	-1	known	missense	c.352	p.T118S	1.000	smart_Pro_4_hyd_alph	smart_Pro_4_hyd_alph	-	no_errors	C17orf101	HGNC	ENSG00000181396	41	0	0.00	61	19	23.75	-	-	-
CAMKK1	0	genome.wustl.edu	37	17	3776749	3776749	+	Missense_Mutation	SNP	T	T	G			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	17	3776749	3776749	T	G	SNP	CAMKK1	ENST00000381771	human	ensembl	69_37n	-1	known	missense	c.1118	p.D373A	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CAMKK1	HGNC	ENSG00000004660	185	0	0.00	99	21	17.50	-	-	-
CDRT15	0	genome.wustl.edu	37	17	14139888	14139888	+	Splice_Site	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	17	14139888	14139888	C	T	SNP	CDRT15	ENST00000420162	human	ensembl	69_37n	-1	known	splice_site	c.262+1	e1+1	0.071	-	-	-	no_errors	CDRT15	HGNC	ENSG00000223510	29	0	0.00	36	7	16.28	-	-	-
CNOT3	0	genome.wustl.edu	37	19	54650352	54650352	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	19	54650352	54650352	G	C	SNP	CNOT3	ENST00000221232	human	ensembl	69_37n	+1	known	missense	c.853	p.D285H	1.000	pirsf_CCR4-NOT_su3/5	pfam_Not_N,pfam_NOT,pirsf_CCR4-NOT_su3/5	-	no_errors	CNOT3	HGNC	ENSG00000088038	211	0	0.00	128	36	21.95	-	-	-
CNOT3	0	genome.wustl.edu	37	19	54650352	54650352	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	19	54650352	54650352	G	C	SNP	CNOT3	ENST00000221232	human	ensembl	69_37n	+1	known	missense	c.853	p.D285H	1.000	pirsf_CCR4-NOT_su3/5	pfam_Not_N,pfam_NOT,pirsf_CCR4-NOT_su3/5	-	no_errors	CNOT3	HGNC	ENSG00000088038	131	0	0.00	128	36	21.95	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16950708	16950708	+	RNA	SNP	T	T	G			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	1	16950708	16950708	T	G	SNP	CROCCP2	ENST00000421700	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	8	0	0.00	8	9	52.94	-	-	-
DDR2	0	genome.wustl.edu	37	1	162743378	162743378	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	1	162743378	162743378	G	C	SNP	DDR2	ENST00000367921	human	ensembl	69_37n	+1	known	missense	c.1848	p.K616N	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR2	HGNC	ENSG00000162733	150	0	0.00	130	126	49.22	-	-	-
DDR2	0	genome.wustl.edu	37	1	162743378	162743378	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	1	162743378	162743378	G	C	SNP	DDR2	ENST00000367921	human	ensembl	69_37n	+1	known	missense	c.1848	p.K616N	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR2	HGNC	ENSG00000162733	182	0	0.00	130	126	49.22	-	-	-
DPY19L3	0	genome.wustl.edu	37	19	32968544	32968544	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	19	32968544	32968544	G	A	SNP	DPY19L3	ENST00000342179	human	ensembl	69_37n	+1	known	missense	c.1814	p.R605K	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L3	HGNC	ENSG00000178904	150	1	0.66	122	38	23.75	-	-	-
DPY19L3	0	genome.wustl.edu	37	19	32968544	32968544	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	19	32968544	32968544	G	A	SNP	DPY19L3	ENST00000342179	human	ensembl	69_37n	+1	known	missense	c.1814	p.R605K	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L3	HGNC	ENSG00000178904	127	0	0.00	122	38	23.75	-	-	-
DSPP	0	genome.wustl.edu	37	4	88535329	88535329	+	Missense_Mutation	SNP	T	T	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	4	88535329	88535329	T	A	SNP	DSPP	ENST00000282478	human	ensembl	69_37n	+1	known	missense	c.1515	p.S505R	0.998	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	276	0	0.00	242	68	21.86	-	-	-
DSPP	0	genome.wustl.edu	37	4	88535329	88535329	+	Missense_Mutation	SNP	T	T	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	4	88535329	88535329	T	A	SNP	DSPP	ENST00000282478	human	ensembl	69_37n	+1	known	missense	c.1515	p.S505R	0.998	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	379	0	0.00	242	68	21.86	-	-	-
FAM169A	0	genome.wustl.edu	37	5	74077801	74077803	+	In_Frame_Del	DEL	CAT	CAT	-			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	CAT	CAT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	5	74077801	74077803	CAT	-	DEL	FAM169A	ENST00000389156	human	ensembl	69_37n	-1	known	in_frame_del	c.1497_1495	p.M499in_frame_del	0.000:0.000:0.000	NULL	NULL	-	no_errors	FAM169A	HGNC	ENSG00000198780	76	0	0.00	75	20	21.05	-	-	-
FAM169A	0	genome.wustl.edu	37	5	74077801	74077803	+	In_Frame_Del	DEL	CAT	CAT	-			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	CAT	CAT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	5	74077801	74077803	CAT	-	DEL	FAM169A	ENST00000389156	human	ensembl	69_37n	-1	known	in_frame_del	c.1497_1495	p.M499in_frame_del	0.000:0.000:0.000	NULL	NULL	-	no_errors	FAM169A	HGNC	ENSG00000198780	102	0	0.00	75	20	21.05	-	-	-
FAM26D	0	genome.wustl.edu	37	6	116879271	116879271	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	6	116879271	116879271	T	C	SNP	FAM26D	ENST00000368596	human	ensembl	69_37n	+1	known	missense	c.842	p.L281S	0.033	NULL	NULL	-	no_errors	FAM26D	HGNC	ENSG00000164451	215	0	0.00	56	89	61.38	-	-	-
FAM26D	0	genome.wustl.edu	37	6	116879271	116879271	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	6	116879271	116879271	T	C	SNP	FAM26D	ENST00000368596	human	ensembl	69_37n	+1	known	missense	c.842	p.L281S	0.033	NULL	NULL	-	no_errors	FAM26D	HGNC	ENSG00000164451	220	0	0.00	56	89	61.38	-	-	-
FAM46A	0	genome.wustl.edu	37	6	82459981	82459982	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	6	82459981	82459982	TC	-	DEL	FAM46A	ENST00000369756	human	ensembl	69_37n	-1	known	frame_shift_del	c.1003_1002	p.E334fs	1.000:1.000	pfam_DUF1693	pfam_DUF1693	-	no_errors	FAM46A	HGNC	ENSG00000112773	168	0	0.00	94	14	12.96	-	-	-
FAM46A	0	genome.wustl.edu	37	6	82459981	82459982	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	6	82459981	82459982	TC	-	DEL	FAM46A	ENST00000369756	human	ensembl	69_37n	-1	known	frame_shift_del	c.1003_1002	p.E334fs	1.000:1.000	pfam_DUF1693	pfam_DUF1693	-	no_errors	FAM46A	HGNC	ENSG00000112773	153	0	0.00	94	14	12.96	-	-	-
GP1BA	0	genome.wustl.edu	37	17	4837763	4837763	+	Silent	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	17	4837763	4837763	C	T	SNP	GP1BA	ENST00000329125	human	ensembl	69_37n	+1	known	silent	c.1864	p.L622	0.984	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	GP1BA	HGNC	ENSG00000185245	72	0	0.00	21	46	68.66	-	-	-
KCNIP2	0	genome.wustl.edu	37	10	103588945	103588945	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	10	103588945	103588945	C	T	SNP	KCNIP2	ENST00000461105	human	ensembl	69_37n	-1	known	missense	c.280	p.D94N	1.000	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,prints_Recoverin	-	no_errors	KCNIP2	HGNC	ENSG00000120049	58	0	0.00	44	18	29.03	-	-	-
KCNIP2	0	genome.wustl.edu	37	10	103588945	103588945	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	10	103588945	103588945	C	T	SNP	KCNIP2	ENST00000461105	human	ensembl	69_37n	-1	known	missense	c.280	p.D94N	1.000	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,prints_Recoverin	-	no_errors	KCNIP2	HGNC	ENSG00000120049	31	0	0.00	44	18	29.03	-	-	-
KIAA1239	0	genome.wustl.edu	37	4	37445614	37445615	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	4	37445614	37445615	-	A	INS	KIAA1239	ENST00000309447	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2004_2005	p.M669fs	1.000:1.000	NULL	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1239	HGNC	ENSG00000174145	126	0	0.00	110	32	22.54	-	-	-
KIAA1239	0	genome.wustl.edu	37	4	37445614	37445615	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	4	37445614	37445615	-	A	INS	KIAA1239	ENST00000309447	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2004_2005	p.M669fs	1.000:1.000	NULL	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1239	HGNC	ENSG00000174145	116	0	0.00	110	32	22.54	-	-	-
KRTAP4-6	0	genome.wustl.edu	37	17	39296423	39296423	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	17	39296423	39296423	C	T	SNP	KRTAP4-6	ENST00000345847	human	ensembl	69_37n	-1	known	missense	c.317	p.R106H	0.000	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-6	HGNC	ENSG00000198090	77	0	0.00	76	21	21.65	-	-	-
KRTAP4-6	0	genome.wustl.edu	37	17	39296423	39296423	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	17	39296423	39296423	C	T	SNP	KRTAP4-6	ENST00000345847	human	ensembl	69_37n	-1	known	missense	c.317	p.R106H	0.000	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-6	HGNC	ENSG00000198090	49	0	0.00	76	21	21.65	-	-	-
LTBP2	0	genome.wustl.edu	37	14	74975371	74975371	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	14	74975371	74975371	G	A	SNP	LTBP2	ENST00000556206	human	ensembl	69_37n	-1	novel	missense	c.385	p.R129W	0.304	pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd,pfam_EGF-like_dom,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	-	no_start_codon:pseudogene:no_stop_codon	LTBP2	HGNC	ENSG00000119681	64	0	0.00	22	13	37.14	-	-	-
LTBP2	0	genome.wustl.edu	37	14	74975371	74975371	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	14	74975371	74975371	G	A	SNP	LTBP2	ENST00000556206	human	ensembl	69_37n	-1	novel	missense	c.385	p.R129W	0.304	pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd,pfam_EGF-like_dom,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	-	no_start_codon:pseudogene:no_stop_codon	LTBP2	HGNC	ENSG00000119681	19	0	0.00	22	13	37.14	-	-	-
MUC2	0	genome.wustl.edu	37	11	1101090	1101090	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	11	1101090	1101090	G	A	SNP	MUC2	ENST00000441003	human	ensembl	69_37n	+1	known	missense	c.7489	p.V2497I	0.000	smart_VWF_C,pfscan_VWF_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	102	0	0.00	68	14	16.87	-	-	-
MUC2	0	genome.wustl.edu	37	11	1101090	1101090	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	11	1101090	1101090	G	A	SNP	MUC2	ENST00000441003	human	ensembl	69_37n	+1	known	missense	c.7489	p.V2497I	0.000	smart_VWF_C,pfscan_VWF_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	46	0	0.00	68	14	16.87	-	-	-
OBSCN	0	genome.wustl.edu	37	1	228506585	228506585	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	1	228506585	228506585	T	C	SNP	OBSCN	ENST00000422127	human	ensembl	69_37n	+1	known	missense	c.14132	p.V4711A	0.993	smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	20	0	0.00	27	5	15.62	-	-	-
OR5R1	0	genome.wustl.edu	37	11	56185039	56185039	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	11	56185039	56185039	C	T	SNP	OR5R1	ENST00000312253	human	ensembl	69_37n	-1	known	missense	c.670	p.A224T	0.003	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5R1	HGNC	ENSG00000174942	242	0	0.00	118	111	48.47	-	-	-
OR5R1	0	genome.wustl.edu	37	11	56185039	56185039	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	11	56185039	56185039	C	T	SNP	OR5R1	ENST00000312253	human	ensembl	69_37n	-1	known	missense	c.670	p.A224T	0.003	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5R1	HGNC	ENSG00000174942	263	0	0.00	118	111	48.47	-	-	-
PEX2	0	genome.wustl.edu	37	8	77895909	77895909	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	8	77895909	77895909	C	T	SNP	PEX2	ENST00000357039	human	ensembl	69_37n	-1	known	missense	c.506	p.R169H	1.000	pfam_Pex_N	pfam_Pex_N,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PEX2	HGNC	ENSG00000164751	138	0	0.00	143	26	15.38	-	-	-
PRKCE	0	genome.wustl.edu	37	2	46070194	46070194	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	2	46070194	46070194	C	T	SNP	PRKCE	ENST00000306156	human	ensembl	69_37n	+1	known	missense	c.404	p.S135L	0.749	superfamily_C2_Ca/lipid-bd_dom_CaLB,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_Ca-dep,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	PRKCE	HGNC	ENSG00000171132	503	0	0.00	300	96	24.24	-	-	-
PRKCE	0	genome.wustl.edu	37	2	46070194	46070194	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	2	46070194	46070194	C	T	SNP	PRKCE	ENST00000306156	human	ensembl	69_37n	+1	known	missense	c.404	p.S135L	0.749	superfamily_C2_Ca/lipid-bd_dom_CaLB,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_Ca-dep,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	PRKCE	HGNC	ENSG00000171132	427	0	0.00	300	96	24.24	-	-	-
RPGRIP1	0	genome.wustl.edu	37	14	21796707	21796707	+	Missense_Mutation	SNP	A	A	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	14	21796707	21796707	A	T	SNP	RPGRIP1	ENST00000206660	human	ensembl	69_37n	+1	known	missense	c.3020	p.H1007L	1.000	NULL	pfam_DUF3250,superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_errors	RPGRIP1	HGNC	ENSG00000092200	216	0	0.00	41	111	73.03	-	-	-
RPGRIP1	0	genome.wustl.edu	37	14	21796707	21796707	+	Missense_Mutation	SNP	A	A	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	14	21796707	21796707	A	T	SNP	RPGRIP1	ENST00000206660	human	ensembl	69_37n	+1	known	missense	c.3020	p.H1007L	1.000	NULL	pfam_DUF3250,superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_errors	RPGRIP1	HGNC	ENSG00000092200	269	0	0.00	41	111	73.03	-	-	-
SMCR8	0	genome.wustl.edu	37	17	18221324	18221324	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	17	18221324	18221324	G	A	SNP	SMCR8	ENST00000406438	human	ensembl	69_37n	+1	known	missense	c.2221	p.A741T	0.280	NULL	pfam_Folliculin	-	no_errors	SMCR8	HGNC	ENSG00000176994	156	0	0.00	77	35	31.25	-	-	-
SMCR8	0	genome.wustl.edu	37	17	18221324	18221324	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	17	18221324	18221324	G	A	SNP	SMCR8	ENST00000406438	human	ensembl	69_37n	+1	known	missense	c.2221	p.A741T	0.280	NULL	pfam_Folliculin	-	no_errors	SMCR8	HGNC	ENSG00000176994	112	0	0.00	77	35	31.25	-	-	-
SNAI1	0	genome.wustl.edu	37	20	48604456	48604456	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	20	48604456	48604456	C	T	SNP	SNAI1	ENST00000244050	human	ensembl	69_37n	+1	known	missense	c.658	p.R220C	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI1	HGNC	ENSG00000124216	165	0	0.00	83	34	29.06	-	-	-
SNAI1	0	genome.wustl.edu	37	20	48604456	48604456	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	20	48604456	48604456	C	T	SNP	SNAI1	ENST00000244050	human	ensembl	69_37n	+1	known	missense	c.658	p.R220C	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI1	HGNC	ENSG00000124216	79	0	0.00	83	34	29.06	-	-	-
SPHK2	0	genome.wustl.edu	37	19	49129267	49129267	+	Silent	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	19	49129267	49129267	C	T	SNP	SPHK2	ENST00000443164	human	ensembl	69_37n	+1	known	silent	c.345	p.G115	1.000	NULL	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	SPHK2	HGNC	ENSG00000063176	18	0	0.00	13	5	27.78	-	-	-
SPHK2	0	genome.wustl.edu	37	19	49129267	49129267	+	Silent	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	19	49129267	49129267	C	T	SNP	SPHK2	ENST00000443164	human	ensembl	69_37n	+1	known	silent	c.345	p.G115	1.000	NULL	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	SPHK2	HGNC	ENSG00000063176	8	0	0.00	13	5	27.78	-	-	-
TFAP2A	0	genome.wustl.edu	37	6	10410138	10410138	+	Missense_Mutation	SNP	A	A	G			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	6	10410138	10410138	A	G	SNP	TFAP2A	ENST00000379604	human	ensembl	69_37n	-1	known	missense	c.476	p.V159A	1.000	NULL	pfam_TF_AP2_C,prints_TF_AP2_C,prints_TF_AP2_alpha_N	-	no_errors	TFAP2A	HGNC	ENSG00000137203	37	0	0.00	37	9	19.57	-	-	-
TFAP2A	0	genome.wustl.edu	37	6	10410138	10410138	+	Missense_Mutation	SNP	A	A	G			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	6	10410138	10410138	A	G	SNP	TFAP2A	ENST00000379604	human	ensembl	69_37n	-1	known	missense	c.476	p.V159A	1.000	NULL	pfam_TF_AP2_C,prints_TF_AP2_C,prints_TF_AP2_alpha_N	-	no_errors	TFAP2A	HGNC	ENSG00000137203	28	0	0.00	37	9	19.57	-	-	-
TRPC1	0	genome.wustl.edu	37	3	142503607	142503607	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	3	142503607	142503607	G	A	SNP	TRPC1	ENST00000476941	human	ensembl	69_37n	+1	known	missense	c.1022	p.G341D	1.000	tigrfam_TRP_channel	pfam_TRP_dom,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC1_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC1	HGNC	ENSG00000144935	226	1	0.44	196	142	42.01	-	-	-
TRPC1	0	genome.wustl.edu	37	3	142503607	142503607	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	3	142503607	142503607	G	A	SNP	TRPC1	ENST00000476941	human	ensembl	69_37n	+1	known	missense	c.1022	p.G341D	1.000	tigrfam_TRP_channel	pfam_TRP_dom,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC1_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC1	HGNC	ENSG00000144935	274	0	0.00	196	142	42.01	-	-	-
VAV1	0	genome.wustl.edu	37	19	6833625	6833625	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	19	6833625	6833625	G	A	SNP	VAV1	ENST00000304076	human	ensembl	69_37n	+1	known	missense	c.1697	p.R566Q	0.665	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH3_domain,prints_SH2,prints_SM22_calponin	-	no_errors	VAV1	HGNC	ENSG00000141968	384	0	0.00	303	80	20.89	-	-	-
VAV1	0	genome.wustl.edu	37	19	6833625	6833625	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	19	6833625	6833625	G	A	SNP	VAV1	ENST00000304076	human	ensembl	69_37n	+1	known	missense	c.1697	p.R566Q	0.665	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH3_domain,prints_SH2,prints_SM22_calponin	-	no_errors	VAV1	HGNC	ENSG00000141968	340	1	0.29	303	80	20.89	-	-	-
WDR44	0	genome.wustl.edu	37	X	117540916	117540916	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	X	117540916	117540916	C	T	SNP	WDR44	ENST00000254029	human	ensembl	69_37n	+1	known	missense	c.1460	p.A487V	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR44	HGNC	ENSG00000131725	468	0	0.00	292	153	34.38	-	-	-
WDR44	0	genome.wustl.edu	37	X	117540916	117540916	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	X	117540916	117540916	C	T	SNP	WDR44	ENST00000254029	human	ensembl	69_37n	+1	known	missense	c.1460	p.A487V	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR44	HGNC	ENSG00000131725	559	0	0.00	292	153	34.38	-	-	-
YSK4	0	genome.wustl.edu	37	2	135745195	135745195	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	8060bafc-8b8c-44ba-91ba-8a9035b52f44	2	135745195	135745195	G	C	SNP	YSK4	ENST00000375845	human	ensembl	69_37n	-1	known	missense	c.1247	p.A416G	0.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	YSK4	HGNC	ENSG00000176601	215	0	0.00	152	41	21.24	-	-	-
YSK4	0	genome.wustl.edu	37	2	135745195	135745195	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A13F-01A-11D-A12Q-09	TCGA-A7-A13F-11A-42D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f9ad889c-2135-40e3-97e6-c022d7eb6a92	9b12ed02-9183-4b84-b638-fd56f00f411a	2	135745195	135745195	G	C	SNP	YSK4	ENST00000375845	human	ensembl	69_37n	-1	known	missense	c.1247	p.A416G	0.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	YSK4	HGNC	ENSG00000176601	337	0	0.00	152	41	21.24	-	-	-
