Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ARHGEF33	0	genome.wustl.edu	37	2	39199061	39199061	+	Silent	SNP	G	G	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	2	39199061	39199061	G	A	SNP	ARHGEF33	ENST00000536934	human	ensembl	69_37n	+1	known	silent	c.2534	p.*845	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_Prefoldin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF33	HGNC	ENSG00000214694	187	0	0.00	71	59	45.38	-	-	-
ASAH2B	0	genome.wustl.edu	37	10	52502735	52502735	+	Silent	SNP	C	C	T			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	10	52502735	52502735	C	T	SNP	ASAH2B	ENST00000374006	human	ensembl	69_37n	+1	known	silent	c.51	p.F17	1.000	NULL	pfam_Ceramidase_alk	-	no_errors	ASAH2B	HGNC	ENSG00000204147	318	0	0.00	86	71	44.94	-	-	-
CD163L1	0	genome.wustl.edu	37	12	7550864	7550864	+	Silent	SNP	G	G	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	12	7550864	7550864	G	A	SNP	CD163L1	ENST00000313599	human	ensembl	69_37n	-1	known	silent	c.1725	p.C575	0.998	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt,prints_Srcr_rcpt	-	no_errors	CD163L1	HGNC	ENSG00000177675	128	0	0.00	59	42	41.58	-	-	-
CDC25C	0	genome.wustl.edu	37	5	137666850	137666850	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	5	137666850	137666850	G	A	SNP	CDC25C	ENST00000323760	human	ensembl	69_37n	-1	known	missense	c.20	p.S7L	0.084	NULL	pfam_MPI_Phosphatase,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom,prints_MPI_Phosphatase	-	no_errors	CDC25C	HGNC	ENSG00000158402	80	0	0.00	46	29	38.67	-	-	-
CEP85L	0	genome.wustl.edu	37	6	118953648	118953648	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	6	118953648	118953648	C	G	SNP	CEP85L	ENST00000368488	human	ensembl	69_37n	-1	known	missense	c.209	p.G70A	1.000	NULL	NULL	-	no_errors	CEP85L	HGNC	ENSG00000111860	96	0	0.00	33	19	36.54	-	-	-
CHD7	0	genome.wustl.edu	37	8	61777594	61777594	+	Missense_Mutation	SNP	T	T	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	8	61777594	61777594	T	A	SNP	CHD7	ENST00000307121	human	ensembl	69_37n	+1	known	missense	c.8096	p.M2699K	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316	20	0	0.00	5	8	61.54	-	-	-
CSN1S1	0	genome.wustl.edu	37	4	70810640	70810640	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	4	70810640	70810640	G	A	SNP	CSN1S1	ENST00000246891	human	ensembl	69_37n	+1	known	missense	c.475	p.V159I	0.000	NULL	NULL	-	no_errors	CSN1S1	HGNC	ENSG00000126545	281	1	0.35	83	63	43.15	-	-	-
DHTKD1	0	genome.wustl.edu	37	10	12111089	12111089	+	Silent	SNP	C	C	G			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	10	12111089	12111089	C	G	SNP	DHTKD1	ENST00000263035	human	ensembl	69_37n	+1	known	silent	c.57	p.L19	0.000	pirsf_2oxoglutarate_DH_E1	pfam_Transketolase-like_Pyr-bd,pfam_DH_E1,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	DHTKD1	HGNC	ENSG00000181192	16	0	0.00	8	6	42.86	-	-	-
DYSF	0	genome.wustl.edu	37	2	71891541	71891541	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	2	71891541	71891541	G	T	SNP	DYSF	ENST00000413539	human	ensembl	69_37n	+1	known	missense	c.5123	p.R1708L	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_MFS_dom_general_subst_transpt,smart_C2_Ca-dep,smart_Peroxin/Ferlin,pfscan_C2_membr_targeting	-	no_errors	DYSF	HGNC	ENSG00000135636	43	0	0.00	33	4	10.81	-	-	-
FAT3	0	genome.wustl.edu	37	11	92531298	92531298	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	11	92531298	92531298	G	T	SNP	FAT3	ENST00000298047	human	ensembl	69_37n	+1	known	missense	c.5119	p.D1707Y	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	90	0	0.00	30	30	50.00	-	-	-
FNDC1	0	genome.wustl.edu	37	6	159635993	159635993	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	6	159635993	159635993	C	T	SNP	FNDC1	ENST00000329629	human	ensembl	69_37n	+1	novel	nonsense	c.352	p.Q118*	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	FNDC1	HGNC	ENSG00000164694	62	0	0.00	28	18	39.13	-	-	-
GBP5	0	genome.wustl.edu	37	1	89732807	89732807	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	1	89732807	89732807	T	C	SNP	GBP5	ENST00000343435	human	ensembl	69_37n	-1	known	missense	c.458	p.K153R	0.003	pfam_Guanylate-bd_N	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	-	no_errors	GBP5	HGNC	ENSG00000154451	102	0	0.00	42	40	48.78	-	-	-
GPT	0	genome.wustl.edu	37	8	145730243	145730243	+	Silent	SNP	G	G	T			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	8	145730243	145730243	G	T	SNP	GPT	ENST00000394955	human	ensembl	69_37n	+1	known	silent	c.342	p.A114	0.005	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom,prints_ACC_synthase	-	no_errors	GPT	HGNC	ENSG00000167701	49	0	0.00	21	16	43.24	-	-	-
HRNR	0	genome.wustl.edu	37	1	152189242	152189242	+	Silent	SNP	A	A	G			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	1	152189242	152189242	A	G	SNP	HRNR	ENST00000368801	human	ensembl	69_37n	-1	known	silent	c.4863	p.S1621	0.190	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	HRNR	HGNC	ENSG00000197915	9	0	0.00	10	9	47.37	-	-	-
KCNK4	0	genome.wustl.edu	37	11	64064626	64064626	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	11	64064626	64064626	C	T	SNP	KCNK4	ENST00000394525	human	ensembl	69_37n	+1	known	missense	c.349	p.R117C	1.000	pfam_Ion_trans_2,prints_2pore_dom_K_chnl	pfam_Ion_trans_2,prints_2pore_dom_K_chnl_TRAAK,prints_2pore_dom_K_chnl_TREK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK4	HGNC	ENSG00000182450	31	0	0.00	17	13	43.33	-	-	-
LRBA	0	genome.wustl.edu	37	4	151223869	151223869	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	4	151223869	151223869	C	G	SNP	LRBA	ENST00000357115	human	ensembl	69_37n	-1	known	missense	c.7958	p.G2653A	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589	121	0	0.00	60	48	44.44	-	-	-
MEF2C	0	genome.wustl.edu	37	5	88047758	88047758	+	Silent	SNP	G	G	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	5	88047758	88047758	G	A	SNP	MEF2C	ENST00000437473	human	ensembl	69_37n	-1	known	silent	c.505	p.L169	1.000	NULL	pfam_TF_MADSbox,pfam_HJURP_C,superfamily_TF_MADSbox,smart_TF_MADSbox,prints_TF_MADSbox,pfscan_TF_MADSbox	-	no_errors	MEF2C	HGNC	ENSG00000081189	210	0	0.00	82	50	37.88	-	-	-
NBPF1	0	genome.wustl.edu	37	1	16905869	16905869	+	RNA	SNP	G	G	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	1	16905869	16905869	G	A	SNP	NBPF1	ENST00000430580	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.241	-	-	-	no_errors	NBPF1	HGNC	ENSG00000219481	32	0	0.00	30	6	16.67	-	-	-
PLEKHA6	0	genome.wustl.edu	37	1	204210567	204210567	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	1	204210567	204210567	T	C	SNP	PLEKHA6	ENST00000272203	human	ensembl	69_37n	-1	known	missense	c.2345	p.E782G	0.046	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	47	0	0.00	48	15	23.81	-	-	-
PPP1R7	0	genome.wustl.edu	37	2	242098694	242098694	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	2	242098694	242098694	G	A	SNP	PPP1R7	ENST00000234038	human	ensembl	69_37n	+1	known	missense	c.370	p.E124K	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_U2A'_phosphoprotein32A_C	-	no_errors	PPP1R7	HGNC	ENSG00000115685	84	0	0.00	40	22	34.92	-	-	-
PRAMEF1	0	genome.wustl.edu	37	1	12853415	12853415	+	Silent	SNP	A	A	G			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	1	12853415	12853415	A	G	SNP	PRAMEF1	ENST00000332296	human	ensembl	69_37n	+1	known	silent	c.39	p.A13	0.003	NULL	NULL	-	no_errors	PRAMEF1	HGNC	ENSG00000116721	102	1	0.97	65	8	10.96	-	-	-
PTPN23	0	genome.wustl.edu	37	3	47451185	47451185	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	3	47451185	47451185	G	C	SNP	PTPN23	ENST00000265562	human	ensembl	69_37n	+1	known	missense	c.1990	p.A664P	1.000	NULL	pfam_BRO1_dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_BRO1_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN23	HGNC	ENSG00000076201	56	0	0.00	12	12	50.00	-	-	-
RABEP1	0	genome.wustl.edu	37	17	5266266	5266267	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	17	5266266	5266267	AC	-	DEL	RABEP1	ENST00000262477	human	ensembl	69_37n	+1	known	frame_shift_del	c.1623_1624	p.Q542fs	1.000:1.000	pfam_Rabaptin_coiled-coil	pfam_Rabaptin_coiled-coil,pfam_Rabaptin_Rab5-bd_dom,prints_Rabaptin	-	no_errors	RABEP1	HGNC	ENSG00000029725	129	0	0.00	64	35	35.35	-	-	-
TRBV4-1	0	genome.wustl.edu	37	7	142013409	142013409	+	Silent	SNP	C	C	T			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	7	142013409	142013409	C	T	SNP	TRBV4-1	ENST00000390357	human	ensembl	69_37n	+1	known	silent	c.264	p.P88	0.000	pfam_Ig_V-set,pfscan_Ig-like	pfam_Ig_V-set,pfscan_Ig-like	-	no_stop_codon:bad_bp_length_for_coding_region	TRBV4-1	HGNC	ENSG00000211710	75	0	0.00	10	33	76.74	-	-	-
USP48	0	genome.wustl.edu	37	1	22073561	22073561	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	1	22073561	22073561	T	-	DEL	USP48	ENST00000308271	human	ensembl	69_37n	-1	known	frame_shift_del	c.990	p.G331fs	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19,pfscan_Ubiquitin_supergroup	-	no_errors	USP48	HGNC	ENSG00000090686	56	0	0.00	69	48	40.34	-	-	-
VWC2L	0	genome.wustl.edu	37	2	215440482	215440482	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	2	215440482	215440482	G	A	SNP	VWC2L	ENST00000312504	human	ensembl	69_37n	+1	known	missense	c.607	p.G203R	1.000	NULL	smart_VWF_C,pfscan_VWF_C	-	no_errors	VWC2L	HGNC	ENSG00000174453	121	0	0.00	40	37	48.05	-	-	-
ZNF180	0	genome.wustl.edu	37	19	44981511	44981511	+	Missense_Mutation	SNP	A	A	T			TCGA-A7-A13G-01A-11D-A13L-09	TCGA-A7-A13G-11A-51D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef847b83-eb88-435b-bcfd-4b51d4dfa5fe	7eaacabd-76fe-4080-9e1c-7277bffe8b89	19	44981511	44981511	A	T	SNP	ZNF180	ENST00000221327	human	ensembl	69_37n	-1	known	missense	c.1187	p.L396H	0.998	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF180	HGNC	ENSG00000167384	74	0	0.00	41	38	48.10	-	-	-
