Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTG1	0	genome.wustl.edu	37	17	79478213	79478215	+	Splice_Site	DEL	CCC	CCC	-			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	CCC	CCC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	17	79478213	79478215	CCC	-	DEL	ACTG1	ENST00000331925	human	ensembl	69_37n	-1	known	splice_site_del	c.802+3_802+1	e4-1	1.000:1.000:0.986	-	-	-	no_errors	ACTG1	HGNC	ENSG00000184009	26	0	0.00	12	6	33.33	-	-	-
ANKRD34B	0	genome.wustl.edu	37	5	79855031	79855031	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	5	79855031	79855031	C	A	SNP	ANKRD34B	ENST00000338682	human	ensembl	69_37n	-1	known	missense	c.808	p.D270Y	0.998	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34B	HGNC	ENSG00000189127	114	0	0.00	85	44	34.11	-	-	-
APOBR	0	genome.wustl.edu	37	16	28507424	28507424	+	Silent	SNP	C	C	T			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	16	28507424	28507424	C	T	SNP	APOBR	ENST00000564831	human	ensembl	69_37n	+1	known	silent	c.1062	p.A354	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	9	0	0.00	25	10	28.57	-	-	-
ARHGAP33	0	genome.wustl.edu	37	19	36279197	36279198	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	19	36279197	36279198	-	G	INS	ARHGAP33	ENST00000007510	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3730_3731	p.E1247fs	0.606:0.488	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777	10	0	0.00	3	2	40.00	-	-	-
ATAD5	0	genome.wustl.edu	37	17	29221047	29221047	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	17	29221047	29221047	A	G	SNP	ATAD5	ENST00000321990	human	ensembl	69_37n	+1	known	missense	c.5176	p.K1726E	0.997	NULL	pfam_ATPase_AAA_core,smart_AAA+_ATPase	-	no_errors	ATAD5	HGNC	ENSG00000176208	95	0	0.00	82	48	36.92	-	-	-
CDH1	0	genome.wustl.edu	37	16	68835780	68835781	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	16	68835780	68835781	-	C	INS	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_ins	c.371_372	p.P127fs	0.005:0.015	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	75	0	0.00	66	32	32.65	-	-	-
COL4A2	0	genome.wustl.edu	37	13	111156284	111156284	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	13	111156284	111156284	G	A	SNP	COL4A2	ENST00000360467	human	ensembl	69_37n	+1	known	missense	c.4229	p.R1410Q	0.352	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A2	HGNC	ENSG00000134871	12	0	0.00	12	4	25.00	-	-	-
COL7A1	0	genome.wustl.edu	37	3	48612280	48612280	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	3	48612280	48612280	C	A	SNP	COL7A1	ENST00000328333	human	ensembl	69_37n	-1	known	missense	c.6298	p.G2100C	0.720	NULL	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270	22	0	0.00	17	13	43.33	-	-	-
CSNK2A2	0	genome.wustl.edu	37	16	58200581	58200581	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	16	58200581	58200581	C	G	SNP	CSNK2A2	ENST00000262506	human	ensembl	69_37n	-1	known	missense	c.734	p.R245P	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CSNK2A2	HGNC	ENSG00000070770	134	0	0.00	48	51	51.52	-	-	-
CYFIP1	0	genome.wustl.edu	37	15	23000246	23000246	+	Silent	SNP	A	A	G			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	15	23000246	23000246	A	G	SNP	CYFIP1	ENST00000561263	human	ensembl	69_37n	+1	putative	silent	c.522	p.V174	1.000	NULL	pfam_Cytoplasmic_FMR1-int,prints_Cytoplasmic_FMR1-int	-	no_start_codon	CYFIP1	HGNC	ENSG00000068793	119	0	0.00	75	33	30.56	-	-	-
GNAS	0	genome.wustl.edu	37	20	57484420	57484420	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	20	57484420	57484420	C	T	SNP	GNAS	ENST00000354359	human	ensembl	69_37n	+1	known	missense	c.604	p.R202C	1.000	pfam_Gprotein_alpha_su,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	151	0	0.00	150	116	43.61	-	-	-
KIAA1429	0	genome.wustl.edu	37	8	95508070	95508070	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	8	95508070	95508070	A	G	SNP	KIAA1429	ENST00000297591	human	ensembl	69_37n	-1	known	missense	c.4433	p.V1478A	0.999	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944	128	0	0.00	166	104	38.52	-	-	-
MAGEC1	0	genome.wustl.edu	37	X	140994265	140994265	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	X	140994265	140994265	G	A	SNP	MAGEC1	ENST00000285879	human	ensembl	69_37n	+1	known	missense	c.1075	p.E359K	0.021	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	858	0	0.00	350	578	62.15	-	-	-
OR2T35	0	genome.wustl.edu	37	1	248801953	248801954	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	1	248801953	248801954	-	T	INS	OR2T35	ENST00000317450	human	ensembl	69_37n	-1	known	frame_shift_ins	c.607_606	p.C202fs	0.101:0.095	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T35	HGNC	ENSG00000177151	8	0	0.00	5	2	28.57	-	-	-
PCDHB11	0	genome.wustl.edu	37	5	140581014	140581015	+	In_Frame_Ins	INS	-	-	CCC			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	5	140581014	140581015	-	CCC	INS	PCDHB11	ENST00000354757	human	ensembl	69_37n	+1	known	in_frame_ins	c.1667_1668	p.557in_frame_insP	1.000:1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479	34	0	0.00	29	5	14.71	-	-	-
PLCXD2	0	genome.wustl.edu	37	3	111432878	111432878	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	3	111432878	111432878	C	T	SNP	PLCXD2	ENST00000477665	human	ensembl	69_37n	+1	known	missense	c.769	p.R257W	0.000	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	-	no_errors	PLCXD2	HGNC	ENSG00000240891	241	0	0.00	96	50	34.01	-	-	-
PREPL	0	genome.wustl.edu	37	2	44556197	44556197	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	2	44556197	44556197	G	A	SNP	PREPL	ENST00000260648	human	ensembl	69_37n	-1	known	nonsense	c.1408	p.Q470*	0.619	NULL	pfam_Peptidase_S9,pfam_Peptidase_S9A_B_C_N,superfamily_Peptidase_S9A_B_C_N,prints_Peptidase_S9A	-	no_errors	PREPL	HGNC	ENSG00000138078	397	0	0.00	268	84	23.86	-	-	-
PTPN14	0	genome.wustl.edu	37	1	214557496	214557496	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	1	214557496	214557496	G	A	SNP	PTPN14	ENST00000366956	human	ensembl	69_37n	-1	known	missense	c.1702	p.P568S	1.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104	58	0	0.00	27	24	47.06	-	-	-
RAB30	0	genome.wustl.edu	37	11	82698729	82698729	+	Silent	SNP	G	G	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	11	82698729	82698729	G	A	SNP	RAB30	ENST00000260056	human	ensembl	69_37n	-1	known	silent	c.261	p.L87	0.997	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB30	HGNC	ENSG00000137502	263	0	0.00	111	88	44.22	-	-	-
RETSAT	0	genome.wustl.edu	37	2	85571455	85571455	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	2	85571455	85571455	A	T	SNP	RETSAT	ENST00000295802	human	ensembl	69_37n	-1	known	missense	c.1273	p.S425T	0.004	NULL	pfam_Amino_oxidase,pfam_FAD_bind_dom,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_mOase_FAD-bd	-	no_errors	RETSAT	HGNC	ENSG00000042445	42	0	0.00	28	11	28.21	-	-	-
SGSM2	0	genome.wustl.edu	37	17	2279517	2279518	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	17	2279517	2279518	-	C	INS	SGSM2	ENST00000268989	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2571_2572	p.N859fs	0.000:0.001	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM2	HGNC	ENSG00000141258	13	0	0.00	6	2	25.00	-	-	-
TAF1B	0	genome.wustl.edu	37	2	9989571	9989571	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	2	9989571	9989571	A	-	DEL	TAF1B	ENST00000263663	human	ensembl	69_37n	+1	known	frame_shift_del	c.187	p.N66fs	0.991	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750	30	0	0.00	21	4	15.38	-	-	-
TMPRSS11B	0	genome.wustl.edu	37	4	69101719	69101719	+	Splice_Site	DEL	C	C	-			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	4	69101719	69101719	C	-	DEL	TMPRSS11B	ENST00000332644	human	ensembl	69_37n	-1	known	splice_site_del	c.308+1	e4+1	0.861	-	-	-	no_errors	TMPRSS11B	HGNC	ENSG00000185873	137	0	0.00	92	38	27.94	-	-	-
TRPM3	0	genome.wustl.edu	37	9	73442886	73442886	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	9	73442886	73442886	C	A	SNP	TRPM3	ENST00000423814	human	ensembl	69_37n	-1	known	missense	c.856	p.V286F	0.997	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067	246	0	0.00	81	52	39.10	-	-	-
TTC4	0	genome.wustl.edu	37	1	55194092	55194092	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	1	55194092	55194092	T	C	SNP	TTC4	ENST00000371281	human	ensembl	69_37n	+1	known	missense	c.668	p.L223P	1.000	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC4	HGNC	ENSG00000243725	101	0	0.00	89	47	34.56	-	-	-
VGLL3	0	genome.wustl.edu	37	3	87018135	87018135	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	3	87018135	87018135	G	A	SNP	VGLL3	ENST00000398399	human	ensembl	69_37n	-1	known	missense	c.542	p.A181V	0.714	NULL	pfam_Vg_Tdu,smart_TDU_repeat	-	no_errors	VGLL3	HGNC	ENSG00000206538	200	0	0.00	96	36	27.27	-	-	-
ZNF729	0	genome.wustl.edu	37	19	22496594	22496594	+	Silent	SNP	T	T	C			TCGA-A8-A09T-01A-11W-A019-09	TCGA-A8-A09T-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e565da2b-4a3f-4be1-9cf7-2845145d1dbc	8c267083-4672-4f9e-b5ec-19a13e897f78	19	22496594	22496594	T	C	SNP	ZNF729	ENST00000357491	human	ensembl	69_37n	+1	known	silent	c.375	p.D125	0.021	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_stop_codon	ZNF729	HGNC	ENSG00000196350	50	0	0.00	81	41	33.61	-	-	-
